ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet71d01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein 58 6e-09
214KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor 42 3e-04
3CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor ... 39 0.004
4Y297_ANASP (Q8Z006) UPF0284 protein Alr0297 28 4.0

>PRF1_LYCES (Q00451) 36.4 kDa proline-rich protein|
          Length = 346

 Score = 57.8 bits (138), Expect = 6e-09
 Identities = 22/37 (59%), Positives = 28/37 (75%)
 Frame = +2

Query: 302 CPVDVLKLVACVDALNGVVHAXVGANASETCCPLLSG 412
           CP+D LKL ACVD L G++H  +G +A +TCCPLL G
Sbjct: 261 CPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGG 297



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>14KD_DAUCA (P14009) 14 kDa proline-rich protein DC2.15 precursor|
          Length = 137

 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 19/39 (48%), Positives = 23/39 (58%)
 Frame = +2

Query: 296 GKCPVDVLKLVACVDALNGVVHAXVGANASETCCPLLSG 412
           GKCP D LKL  C D LN V +  +G+  +  CC LL G
Sbjct: 52  GKCPRDALKLGVCADVLNLVHNVVIGSPPTLPCCSLLEG 90



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>CCDP_MAIZE (Q01595) Cortical cell-delineating protein precursor (Root-specific|
           protein ZRP3)
          Length = 129

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 19/39 (48%), Positives = 21/39 (53%)
 Frame = +2

Query: 296 GKCPVDVLKLVACVDALNGVVHAXVGANASETCCPLLSG 412
           G+CP+D LKL  C   L  V    VG    E CCPLL G
Sbjct: 46  GRCPIDALKLKVCAKVLGLV---KVGLPQYEQCCPLLEG 81



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>Y297_ANASP (Q8Z006) UPF0284 protein Alr0297|
          Length = 384

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/38 (44%), Positives = 21/38 (55%)
 Frame = +2

Query: 299 KCPVDVLKLVACVDALNGVVHAXVGANASETCCPLLSG 412
           K P+D LKLVA V     VV A +   AS  C  +L+G
Sbjct: 222 KSPIDPLKLVAAVGDPMQVVVAGMAIAASRGCGVMLAG 259


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,025,716
Number of Sequences: 219361
Number of extensions: 170643
Number of successful extensions: 374
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 373
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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