>SCD1_SCHPO (P40995) Rho guanine nucleotide exchange factor scd1|
          Length = 872

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 29/107 (27%), Positives = 44/107 (41%)
 Frame = -2

Query: 321 ILHPEKVLSFFSLCISETSKVIMLSFFSLSDSGETSSVE*VNMGKASTASDDRTTHDSSS 142
           I  P    S F+   S+ +K    +    SD    +S E V      T+    T   + S
Sbjct: 603 ISSPSSKSSPFTKTTSKDTKSATTTDERPSDFIRLNSEESVGTSSLRTSQTTSTIVSNDS 662

Query: 141 CCTKSIPYWSADI*LSDSHMSSANESRCRAVTRTLSGARDTDDVSVY 1
             T SIP   + I   +S ++  N +R   +TR  SG  D   VS++
Sbjct: 663 SSTASIPSQISRISQVNSLLNDYNYNRQSHITRVYSGTDDGSSVSIF 709

>SRP40_YEAST (P32583) Suppressor protein SRP40|
          Length = 406

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 32/107 (29%), Positives = 50/107 (46%)
 Frame = -2

Query: 342 KLSTRDGILHPEKVLSFFSLCISETSKVIMLSFFSLSDSGETSSVE*VNMGKASTASDDR 163
           KLS ++  +  E+  S  S   S +S     S  S S SGE+SS    +   +S+ S D 
Sbjct: 13  KLSVKEKEI--EEKSSSSSSSSSSSSSSSSSSSSSSSSSGESSSSSSSSSSSSSSDSSDS 70

Query: 162 TTHDSSSCCTKSIPYWSADI*LSDSHMSSANESRCRAVTRTLSGARD 22
           +  +SSS  + S    S+    SDS  SS ++S     + + S + D
Sbjct: 71  SDSESSSSSSSSSSSSSSS---SDSESSSESDSSSSGSSSSSSSSSD 114

>TMIE_MOUSE (Q8K467) Transmembrane inner ear expressed protein precursor|
          Length = 153

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 15/48 (31%), Positives = 26/48 (54%)
 Frame = +2

Query: 170 SDAVEAFPILTYSTELVSPESDKLKKESMITLLVSLMHKEKNDSTFSG 313
           +D +E  P L   TE+   +  K KK+S+ T+ + +   EKN++   G
Sbjct: 104 TDKLETVPPLNELTEIPGEDKKKKKKDSVDTVAIKVEEDEKNEAKKKG 151

>ISPG_CHLPN (Q9Z8H0) 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (EC|
           1.17.4.3) (1-hydroxy-2-methyl-2-(E)-butenyl
           4-diphosphate synthase)
          Length = 613

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 206 NRSIWEKPLLHQMTEQPMIHHHAALSPSHTGPQTFDSLIH 87
           N  IW+ P +HQ    P +H HA+    HT    F+   H
Sbjct: 404 NEEIWDSPAVHQ---APFVHFHASDPFIHTSRDFFEKQGH 440

>RRPL_BUNYW (P20470) RNA-directed RNA polymerase (EC 2.7.7.48) (L protein)|
          Length = 2238

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = +2

Query: 215 LVSPESDKLKKESMITLLVSLMHKEKNDSTFSGCNIPSL 331
           LV P SD   K + +   +  MHKEKND   +G    +L
Sbjct: 543 LVFPSSDIKTKRATVVFSIVCMHKEKNDLMDAGALFTTL 581

>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor|
          Length = 374

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 22/71 (30%), Positives = 35/71 (49%)
 Frame = -2

Query: 276 SETSKVIMLSFFSLSDSGETSSVE*VNMGKASTASDDRTTHDSSSCCTKSIPYWSADI*L 97
           S +S     S  S S S  +SS    +   +S++S   ++  SSS  + S+P  S+    
Sbjct: 158 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSVPITSS---T 214

Query: 96  SDSHMSSANES 64
           S SH SS++ S
Sbjct: 215 SSSHSSSSSSS 225

>WSC2_YEAST (P53832) Cell wall integrity and stress response component 2|
           precursor
          Length = 503

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
 Frame = -2

Query: 234 SDSGETSSVE*VNMGKASTASDDRT------THDSSSCCTKSIPYWSADI*LSDSHMSSA 73
           + +  TSS       K ST  D +T      TH SSS  T S    S++   S S  SS+
Sbjct: 131 TSTSTTSSSSTSVSSKTSTKLDTKTSTSSSATHSSSSSSTTSTTTSSSETTTSSSSSSSS 190

Query: 72  NESRCRAVTRTLSGARDT 19
           + +   + T T S    T
Sbjct: 191 SSTSTTSTTSTTSSTTST 208

>ADT1_YEAST (P04710) ADP,ATP carrier protein 1 (ADP/ATP translocase 1) (Adenine|
           nucleotide translocator 1) (ANT 1)
          Length = 309

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/54 (22%), Positives = 24/54 (44%)
 Frame = +2

Query: 155 WVVLSSDAVEAFPILTYSTELVSPESDKLKKESMITLLVSLMHKEKNDSTFSGC 316
           WV+    +  ++P+ T    ++      +K +  +  L  ++ KE   S F GC
Sbjct: 226 WVITMGASTASYPLDTVRRRMMMTSGQTIKYDGALDCLRKIVQKEGAYSLFKGC 279

>STX17_MOUSE (Q9D0I4) Syntaxin-17|
          Length = 301

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
 Frame = +2

Query: 89  ESESQMSADQYGMDLVQHDD---ESWVVLSSDAVEAFPILTYSTELVSPESDKL 241
           E+ SQ     Y +  +  D    ESW  L +D +E   ++T  + LVS + +K+
Sbjct: 146 EAASQSLTQIYALPEIPQDQNAAESWETLEADLIELSHLVTDMSLLVSSQQEKI 199

>Y678_TREPA (O83684) Hypothetical protein TP0678|
          Length = 307

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = -3

Query: 143 HAALSPSHTGPQTFDSLIHICQVPTKAGAEQSREH 39
           H  LSP +T P    +L H  Q+ T    EQ +EH
Sbjct: 271 HILLSPLYTEPSVLPTLEHYTQLCTFFLQEQEKEH 305

>ARRS_MOUSE (P20443) S-arrestin (Retinal S-antigen) (48 kDa protein) (S-AG)|
           (Rod photoreceptor arrestin)
          Length = 403

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +2

Query: 188 FPILTYSTELVSPESDKLKKESMITLLV 271
           F +  +++++  PE DK+ K+S + LL+
Sbjct: 148 FEVKAFASDITDPEEDKIPKKSSVRLLI 175

>CABIN_HUMAN (Q9Y6J0) Calcineurin-binding protein Cabin 1 (Calcineurin inhibitor)|
            (CAIN)
          Length = 2220

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 17/43 (39%), Positives = 20/43 (46%)
 Frame = -3

Query: 347  STNFQLEMEYCIQKRCCHSFPCALVKQARLSCFPSLVCQTLGR 219
            S+N  L +EY       HSF    +KQ R    P LV Q  GR
Sbjct: 1137 SSNLSLWIEYGTMSYALHSFASRQLKQWRGELPPELVQQMEGR 1179

>DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin matrix|
           protein 3) (DMP-3) [Contains: Dentin phosphoprotein
           (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)]
          Length = 934

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = -2

Query: 234 SDSGETS-SVE*VNMGKASTASDDRTTHDSSSCCTKSIPYWSADI*LSDSHMSSANESRC 58
           SDS ++S S +  +   +S +S    + DSSSC   S    S+D   SDS  SS + S  
Sbjct: 622 SDSSDSSDSSDSSDSSDSSDSSSSSDSSDSSSCSDSSDSSDSSD--SSDSSDSSDSSSSD 679

Query: 57  RAVTRTLSGARDTDDVS 7
            + +   S + D+ D S
Sbjct: 680 SSSSSNSSDSSDSSDSS 696


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,248,246
Number of Sequences: 219361
Number of extensions: 909007
Number of successful extensions: 2385
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2377
length of database: 80,573,946
effective HSP length: 91
effective length of database: 60,612,095
effective search space used: 1454690280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)