ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet71c11 |
|---|---|
| Clone Library Name | barley_pub |
>TAR1_KLULA (Q6CQE5) Protein TAR1| Length = 109 Score = 64.7 bits (156), Expect = 1e-10 Identities = 36/79 (45%), Positives = 41/79 (51%) Frame = -2 Query: 252 YSLTLXXXXXXXFPRGTCSLSVSRLYLALDGVYRPIWAAFPNNPTR*PRLVGRQGQGRTG 73 Y TL F TCSLSVSR YLALDG+Y P+ AAFPNN TR TG Sbjct: 14 YFFTLFSKFFSSFHHCTCSLSVSRQYLALDGIYHPLRAAFPNNSTRRKHFTNNWDPRHTG 73 Query: 72 LSPSQAPLSRGLGPGPSLR 16 SPS S+ GP+ + Sbjct: 74 FSPSMTSCSKEHRQGPATK 92
>TAR1_YEAST (Q8TGM6) Protein TAR1 (Transcript antisense to ribosomal RNA| protein 1) Length = 124 Score = 58.9 bits (141), Expect = 5e-09 Identities = 33/70 (47%), Positives = 37/70 (52%) Frame = -2 Query: 252 YSLTLXXXXXXXFPRGTCSLSVSRLYLALDGVYRPIWAAFPNNPTR*PRLVGRQGQGRTG 73 Y TL F TCSLSVSR YLALDG+Y P+ AAFPNN T + TG Sbjct: 29 YFFTLFSKFFSSFHHCTCSLSVSRQYLALDGIYHPLRAAFPNNSTLRRHFTKNRTPRHTG 88 Query: 72 LSPSQAPLSR 43 SPS S+ Sbjct: 89 FSPSMTSCSK 98
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 42.0 bits (97), Expect = 7e-04 Identities = 20/24 (83%), Positives = 22/24 (91%) Frame = +2 Query: 368 GKAVKDLPSSALFGEARVTMRKTA 439 GKAVK+LPSSAL G+ARV MRKTA Sbjct: 15 GKAVKNLPSSALIGDARVNMRKTA 38
>ARX_HUMAN (Q96QS3) Homeobox protein ARX (Aristaless-related homeobox)| Length = 562 Score = 34.3 bits (77), Expect = 0.14 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -3 Query: 110 RASWGDRVRAGRGSHPPRRPFPGDL 36 RA W R +AG +HPP PFPG L Sbjct: 380 RAKWRKREKAGAQTHPPGLPFPGPL 404
>ARX_MOUSE (O35085) Homeobox protein ARX (Aristaless-related homeobox)| Length = 564 Score = 34.3 bits (77), Expect = 0.14 Identities = 14/25 (56%), Positives = 16/25 (64%) Frame = -3 Query: 110 RASWGDRVRAGRGSHPPRRPFPGDL 36 RA W R +AG +HPP PFPG L Sbjct: 382 RAKWRKREKAGAQTHPPGLPFPGPL 406
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 33.5 bits (75), Expect = 0.24 Identities = 20/24 (83%), Positives = 22/24 (91%) Frame = +2 Query: 368 GKAVKDLPSSALFGEARVTMRKTA 439 GKAV ++PSS LFGEARVTMRKTA Sbjct: 15 GKAV-NVPSS-LFGEARVTMRKTA 36
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 33.1 bits (74), Expect = 0.31 Identities = 15/16 (93%), Positives = 16/16 (100%) Frame = +2 Query: 392 SSALFGEARVTMRKTA 439 SSALFGEAR+TMRKTA Sbjct: 21 SSALFGEARITMRKTA 36
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 32.3 bits (72), Expect = 0.52 Identities = 19/24 (79%), Positives = 22/24 (91%) Frame = +2 Query: 368 GKAVKDLPSSALFGEARVTMRKTA 439 GKAV ++PSS+ FGEARVTMRKTA Sbjct: 15 GKAV-NVPSSS-FGEARVTMRKTA 36
>CO2A1_RAT (P05539) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1419 Score = 32.3 bits (72), Expect = 0.52 Identities = 22/64 (34%), Positives = 25/64 (39%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGE 185 G A DR + GAPG P P P P G + G G Q G + P G Sbjct: 982 GAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQ----GPMGPSGPAGA 1037 Query: 186 RPIA 197 R IA Sbjct: 1038 RGIA 1041 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -1 Query: 133 PKQPDSLTAPRGATGS-GPDGALTLPGA 53 P+ P +T P+GA G+ GP GA PGA Sbjct: 806 PQGPTGVTGPKGARGAQGPPGATGFPGA 833 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 GAPG AP P P P G +G LG + ++G Sbjct: 355 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTG 388
>CO2A1_MOUSE (P28481) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1459 Score = 32.3 bits (72), Expect = 0.52 Identities = 22/64 (34%), Positives = 25/64 (39%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGE 185 G A DR + GAPG P P P P G + G G Q G + P G Sbjct: 1022 GAAGVKGDRGETGALGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQ----GPMGPSGPAGA 1077 Query: 186 RPIA 197 R IA Sbjct: 1078 RGIA 1081 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -1 Query: 133 PKQPDSLTAPRGATGS-GPDGALTLPGA 53 P+ P +T P+GA G+ GP GA PGA Sbjct: 846 PQGPTGVTGPKGARGAQGPPGATGFPGA 873 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 GAPG AP P P P G +G LG + ++G Sbjct: 395 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQAG 428
>CO1A1_BOVIN (P02453) Collagen alpha-1(I) chain (Fragments)| Length = 779 Score = 32.0 bits (71), Expect = 0.68 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLG 134 G + DR + GAPG AP P PV P G + G G Sbjct: 590 GSPGAKGDRGETGPAGAPGPPGAPGAPGPVGPAGKSGDRGETG 632
>CO3A1_RAT (P13941) Collagen alpha-1(III) chain precursor| Length = 1463 Score = 31.6 bits (70), Expect = 0.89 Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGER 188 GA G A P P PRG V G G SG G PR N GER Sbjct: 1121 GAAGHQGAVGSPGPAGPRGPVGPHGPPGKDGSSGHPGPIGPPGPRGNRGER 1171 Score = 29.3 bits (64), Expect = 4.4 Identities = 17/49 (34%), Positives = 19/49 (38%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 G DR + GAPG P P PV P G + G G SG Sbjct: 1025 GSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKNGDRGETGPAGPSG 1073 Score = 28.1 bits (61), Expect = 9.9 Identities = 15/36 (41%), Positives = 16/36 (44%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 158 GAPG A P P PRG E+G G G R Sbjct: 1073 GAPGPAGARGAPGPQGPRGDKGETGERGSNGIKGHR 1108 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/46 (36%), Positives = 21/46 (45%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 188 GAPG + A P P GA + G G K+G + P GER Sbjct: 404 GAPGLLGARGPPGPAGANGAPGQRGPSGEPGKNGAKGEPGAR-GER 448
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 31.6 bits (70), Expect = 0.89 Identities = 17/24 (70%), Positives = 19/24 (79%), Gaps = 1/24 (4%) Frame = +2 Query: 368 GKAVKDLPSSA-LFGEARVTMRKT 436 GKAVK PSS+ LFG RV+MRKT Sbjct: 15 GKAVKVAPSSSELFGNGRVSMRKT 38
>COLQ_TORMA (Q03637) Acetylcholinesterase collagenic tail peptide precursor| (AChE Q subunit) Length = 471 Score = 31.6 bits (70), Expect = 0.89 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%) Frame = +3 Query: 48 KGAPGRVRAPSG-------PDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 188 KG PG VR P G P P+ PRG + G G+ P + G + P+ TG++ Sbjct: 150 KGRPG-VRGPRGMPGSPCSPGPIGPRGEKGDIGLTGL-PGARGPMGPKGLTGQK 201
>COL34_CAEEL (P34687) Cuticle collagen 34 (Abnormal ray morphology protein 4)| Length = 299 Score = 31.2 bits (69), Expect = 1.2 Identities = 19/52 (36%), Positives = 23/52 (44%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKY 206 G PG +P P P P G + G G P + G P + GER I KY Sbjct: 234 GQPGADGSPGQPGPKGPNGPDGQPGADG-NPGAPGPAGPPGSPGERGICPKY 284
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 31.2 bits (69), Expect = 1.2 Identities = 17/25 (68%), Positives = 22/25 (88%), Gaps = 1/25 (4%) Frame = +2 Query: 368 GKAVKDLPSSA-LFGEARVTMRKTA 439 GKAVK+L SS+ + G+ARV+MRKTA Sbjct: 15 GKAVKNLSSSSEVQGDARVSMRKTA 39
>CO2A1_HUMAN (P02458) Collagen alpha-1(II) chain precursor [Contains:| Chondrocalcin] Length = 1418 Score = 31.2 bits (69), Expect = 1.2 Identities = 17/49 (34%), Positives = 19/49 (38%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 G A DR + GAPG P P P P G + G G Q G Sbjct: 981 GAAGVKGDRGETGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMG 1029 Score = 30.4 bits (67), Expect = 2.0 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%) Frame = -1 Query: 133 PKQPDSLTAPRGATGS-GPDGALTLPGA 53 P+ P +T P+GA G+ GP GA PGA Sbjct: 805 PQGPTGVTGPKGARGAQGPPGATGFPGA 832
>ELN_BOVIN (P04985) Elastin precursor (Tropoelastin)| Length = 747 Score = 30.8 bits (68), Expect = 1.5 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = -1 Query: 217 FPSRYLFAIGLSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGAL--TLPGAP 50 F +R IG P F LG P +G P + A G+G GAL +PGAP Sbjct: 408 FGARGAVGIGGIPTFGLGPGGFPGIGDAAAAPAAAAAKAAKIGAGGVGALGGVVPGAP 465
>CO1A1_CHICK (P02457) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.8 bits (68), Expect = 1.5 Identities = 17/49 (34%), Positives = 20/49 (40%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 G A DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAAGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065
>CO4A4_RABIT (P55787) Collagen alpha-4(IV) chain (Fragment)| Length = 623 Score = 30.8 bits (68), Expect = 1.5 Identities = 19/47 (40%), Positives = 23/47 (48%) Frame = -1 Query: 190 GLSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAP 50 G+SP G PP L P +P + P GATG P G + PG P Sbjct: 151 GISPPGLFGERGPPGL---PGRPGPV-GPMGATGRAPKGDIPDPGPP 193
>DDEF1_HUMAN (Q9ULH1) 130-kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1| GTPase-activating protein (PIP2-dependent ARF1 GAP) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differe Length = 956 Score = 30.8 bits (68), Expect = 1.5 Identities = 26/98 (26%), Positives = 40/98 (40%) Frame = +3 Query: 33 AQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKYRE 212 A++P K PG + P P +AP+ + G P G L P+ G+ P + + Sbjct: 755 AELPQKPPPGDL--PPKPTELAPKPQI------GDLPPKPGELPPKPQLGDLPPKPQLSD 806 Query: 213 GKMKRTLKRESKSIPPYTTTAPLLASTHTGHARVSLKQ 326 K + K +PP LLA + TG +Q Sbjct: 807 ----LPPKPQMKDLPPKPQLGDLLAKSQTGDVSPKAQQ 840
>CXA1_HUMAN (P17302) Gap junction alpha-1 protein (Connexin-43) (Cx43) (Gap| junction 43 kDa heart protein) Length = 381 Score = 30.8 bits (68), Expect = 1.5 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = -1 Query: 253 ILFDSLFKVLFIFPSRYLFAIGLSPVFSLGRS-LPPDLGCIPKQPDSLT 110 ILF S+F+V F+ Y++ LS V++ R P + C +P T Sbjct: 158 ILFKSIFEVAFLLIQWYIYGFSLSAVYTCKRDPCPHQVDCFLSRPTEKT 206
>CO3A1_MOUSE (P08121) Collagen alpha-1(III) chain precursor| Length = 1464 Score = 30.8 bits (68), Expect = 1.5 Identities = 21/51 (41%), Positives = 21/51 (41%), Gaps = 5/51 (9%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGER 188 GA G A P P PRG V G G SG G PR N GER Sbjct: 1121 GAAGHQGAIGSPGPAGPRGPVGPHGPPGKDGTSGHPGPIGPPGPRGNRGER 1171 Score = 29.6 bits (65), Expect = 3.4 Identities = 17/49 (34%), Positives = 19/49 (38%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 G DR + GAPG P P PV P G + G G SG Sbjct: 1025 GSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPSGKSGDRGETGPAGPSG 1073 Score = 28.5 bits (62), Expect = 7.6 Identities = 17/52 (32%), Positives = 20/52 (38%) Frame = +3 Query: 3 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 158 SG + + GAPG A P P PRG E+G G G R Sbjct: 1057 SGKSGDRGETGPAGPSGAPGPAGARGAPGPQGPRGDKGETGERGSNGIKGHR 1108
>CO1A1_HUMAN (P02452) Collagen alpha-1(I) chain precursor| Length = 1464 Score = 30.8 bits (68), Expect = 1.5 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 G + DR + G PG AP P PV P G + G G +G Sbjct: 1028 GSPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAG 1076
>ZN469_HUMAN (Q96JG9) Zinc finger protein 469 (Fragment)| Length = 2469 Score = 30.8 bits (68), Expect = 1.5 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 6/61 (9%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRV----RAPSGPD--PVAPRGAVNESGCLGMQPKSGGRLRP 167 G++S+ + QVP V RAPS PD P PR S L +PK + +P Sbjct: 2327 GESSTKRKKGQVPGPARSESVGSFGRAPSAPDKPPRTPRKQATPSRVLPTKPKPNSQNKP 2386 Query: 168 R 170 R Sbjct: 2387 R 2387
>CXA1_BOVIN (P18246) Gap junction alpha-1 protein (Connexin-43) (Cx43)| (Vascular smooth muscle connexin-43) Length = 382 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = -1 Query: 253 ILFDSLFKVLFIFPSRYLFAIGLSPVFSLGRS-LPPDLGCIPKQPDSLT 110 ILF S+F+V F+ Y++ LS V++ R P + C +P T Sbjct: 159 ILFKSVFEVAFLLIQWYIYGFSLSAVYTCKRDPCPHQVDCFLSRPTEKT 207
>CO8A2_MOUSE (P25318) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 699 Score = 30.4 bits (67), Expect = 2.0 Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 3/65 (4%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGA---VNESGCLGMQPKSGGRLRPRLN 176 G+ SA G+PG P P P P GA ++E+G G+ +GG L Sbjct: 494 GEPGSAGPTGPPGVPGSPGLTGPPGPPGPPGPPGAPGALDETGIAGLHLPNGGVEGAVLG 553 Query: 177 TGERP 191 G +P Sbjct: 554 KGGKP 558
>CO3A1_CHICK (P12105) Collagen alpha-1(III) chain precursor (Fragments)| Length = 1262 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/43 (37%), Positives = 18/43 (41%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLG 134 G A A DR + G+PG P GP P G E G G Sbjct: 620 GPAGPAGDRGEPGPSGSPGLQGLPGGPGPAGENGKPGEPGPKG 662
>CXA1_RAT (P08050) Gap junction alpha-1 protein (Connexin-43) (Cx43) (Gap| junction 43 kDa heart protein) Length = 381 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = -1 Query: 253 ILFDSLFKVLFIFPSRYLFAIGLSPVFSLGRS-LPPDLGCIPKQPDSLT 110 ILF S+F+V F+ Y++ LS V++ R P + C +P T Sbjct: 158 ILFKSVFEVAFLLIQWYIYGFSLSAVYTCKRDPCPHQVDCFLSRPTEKT 206
>CXA1_MOUSE (P23242) Gap junction alpha-1 protein (Connexin-43) (Cx43) (Gap| junction 43 kDa heart protein) Length = 381 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = -1 Query: 253 ILFDSLFKVLFIFPSRYLFAIGLSPVFSLGRS-LPPDLGCIPKQPDSLT 110 ILF S+F+V F+ Y++ LS V++ R P + C +P T Sbjct: 158 ILFKSVFEVAFLLIQWYIYGFSLSAVYTCKRDPCPHQVDCFLSRPTEKT 206
>CXA1_CANFA (Q6S9C0) Gap junction alpha-1 protein (Connexin-43) (Cx43)| Length = 381 Score = 30.4 bits (67), Expect = 2.0 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = -1 Query: 253 ILFDSLFKVLFIFPSRYLFAIGLSPVFSLGRS-LPPDLGCIPKQPDSLT 110 ILF S+F+V F+ Y++ LS V++ R P + C +P T Sbjct: 158 ILFKSVFEVAFLLIQWYIYGFSLSAVYTCKREPCPHQVDCFLSRPTEKT 206
>PKHA4_RAT (P60669) Pleckstrin homology domain-containing family A member 4| (Phosphoinositol 3-phosphate-binding protein 1) (PEPP-1) Length = 779 Score = 30.4 bits (67), Expect = 2.0 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = -2 Query: 111 PRLVGRQGQGRTGLSPSQAPLSRGLG 34 P V R+ +GRT SP APLSRG G Sbjct: 180 PPEVNRREEGRTSESPEVAPLSRGPG 205
>PGCA_RAT (P07897) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2124 Score = 30.4 bits (67), Expect = 2.0 Identities = 17/63 (26%), Positives = 30/63 (47%) Frame = +3 Query: 9 DASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 188 ++ SA+ ++PW P R PSG + + + + +G L P SGG + +G Sbjct: 864 ESGSASGDGEIPWSSTPTVDRLPSGGESLEGSASASGTGDLSGLP-SGGEITETSASGTE 922 Query: 189 PIA 197 I+ Sbjct: 923 EIS 925
>ARX_BRARE (O42115) Aristaless-related homeobox protein (ARX)| Length = 453 Score = 30.4 bits (67), Expect = 2.0 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -3 Query: 110 RASWGDRVRAGRGSHPPRRPFPGDL 36 RA W R +AG +HP PFPG L Sbjct: 267 RAKWRKREKAGVQAHPTGLPFPGPL 291
>CNO_HUMAN (Q9NUP1) Cappuccino protein homolog| Length = 217 Score = 30.0 bits (66), Expect = 2.6 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = -1 Query: 148 DLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASP 5 D G +P+ P+GA SG G ++ + G W AED +P Sbjct: 7 DGGALPEGLAEEAEPQGAAWSGDSGTVSQSHSSASGPWEDEGAEDGAP 54
>ZN318_MOUSE (Q99PP2) Zinc finger protein 318 (Testicular zinc finger protein)| Length = 2025 Score = 30.0 bits (66), Expect = 2.6 Identities = 15/65 (23%), Positives = 30/65 (46%) Frame = +3 Query: 3 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTG 182 S D+ +T++ + +P + +PS +NE C+ P S L+P + Sbjct: 803 SNDSKESTEKPEKEKSKSPEKELSPSNSSSSNKESKMNEKSCI-KSPSSTESLQPTVKQS 861 Query: 183 ERPIA 197 ++P+A Sbjct: 862 DQPVA 866
>CXA1_XENLA (P16863) Gap junction alpha-1 protein (Connexin-43) (Cx43)| Length = 378 Score = 30.0 bits (66), Expect = 2.6 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 9/69 (13%) Frame = -1 Query: 289 LANSGAVVVYGG--------ILFDSLFKVLFIFPSRYLFAIGLSPVFSLGRS-LPPDLGC 137 L G V + GG ILF S+F+V FI Y++ LS +++ R P + C Sbjct: 138 LEEHGKVKMRGGLLRTYIISILFKSVFEVGFIIIQWYMYGFSLSAIYTCKRDPCPHQVDC 197 Query: 136 IPKQPDSLT 110 +P T Sbjct: 198 FLSRPTEKT 206
>CO1A1_MOUSE (P11087) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 30.0 bits (66), Expect = 2.6 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 167 G PG + P P PRGA G G P + GR+ P Sbjct: 837 GPPGPIGNVGAPGPKGPRGAAGPPGATGF-PGAAGRVGP 874 Score = 29.6 bits (65), Expect = 3.4 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 G + DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/48 (35%), Positives = 22/48 (45%) Frame = +3 Query: 45 WKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGER 188 ++G PG P G P+ PRG G G ++G RP GER Sbjct: 190 FQGPPGEPGEPGGSGPMGPRGPPGPPGKNGDDGEAGKPGRP----GER 233
>B3A2_RABIT (P48746) Anion exchange protein 2 (Non-erythroid band 3-like| protein) (AE2 anion exchanger) (Solute carrier family 4 member 2) (B3RP) Length = 1237 Score = 30.0 bits (66), Expect = 2.6 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%) Frame = -1 Query: 166 GRSLPPDLGCIPK--QPDSLTAPRGATGSGPDGALTLPGAPFQG 41 GR LPP LG PK Q +L A G+ D L G PF G Sbjct: 637 GRLLPPGLGLEPKSAQDKALLQMVEAAGAAEDDPLRRTGRPFGG 680
>RL15_STAEQ (Q5HM18) 50S ribosomal protein L15| Length = 146 Score = 30.0 bits (66), Expect = 2.6 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +3 Query: 48 KGAPG--RVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 194 K A G RVR G G + G G + +SGG+LRP G+ P+ Sbjct: 7 KAAEGSRRVRNRVGRGAATGNGKTSGRGQKGQKARSGGKLRPGFEGGQLPL 57
>DPY13_CAEEL (P17657) Cuticle collagen dpy-13 (Protein dumpy-13)| Length = 302 Score = 30.0 bits (66), Expect = 2.6 Identities = 19/52 (36%), Positives = 21/52 (40%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKY 206 G PG P P P P G + G G P G + P GER I KY Sbjct: 237 GQPGNDGTPGQPGPKGPPGPDGKPGADG-NPGQPGPVGPPGTPGERGICPKY 287
>SAFB2_HUMAN (Q14151) Scaffold attachment factor B2| Length = 953 Score = 30.0 bits (66), Expect = 2.6 Identities = 16/51 (31%), Positives = 21/51 (41%) Frame = +3 Query: 15 SSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 167 + A R W+G + PSGP +A RG V G S G + P Sbjct: 868 AGAASREHARWQGGERGLSGPSGPGHMASRGGVAGRGGFAQGGHSQGHVVP 918
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 30.0 bits (66), Expect = 2.6 Identities = 17/25 (68%), Positives = 19/25 (76%), Gaps = 1/25 (4%) Frame = +2 Query: 368 GKAVKDLPSSA-LFGEARVTMRKTA 439 GKAVK PSS+ + G RVTMRKTA Sbjct: 15 GKAVKLSPSSSEITGNGRVTMRKTA 39
>CO6A2_HUMAN (P12110) Collagen alpha-2(VI) chain precursor| Length = 1019 Score = 29.6 bits (65), Expect = 3.4 Identities = 21/51 (41%), Positives = 22/51 (43%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 158 GDA D Q KG PGR G PRGA E G G + GGR Sbjct: 493 GDAGPRGDSGQPGPKGDPGR----PGFSYPGPRGAPGEKGEPGPRGPEGGR 539
>CO1A1_RAT (P02454) Collagen alpha-1(I) chain precursor| Length = 1453 Score = 29.6 bits (65), Expect = 3.4 Identities = 16/49 (32%), Positives = 20/49 (40%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 G + DR + G PG AP P PV P G + G G +G Sbjct: 1017 GAPGAKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1065
>CO1A1_CANFA (Q9XSJ7) Collagen alpha-1(I) chain precursor| Length = 1460 Score = 29.6 bits (65), Expect = 3.4 Identities = 16/49 (32%), Positives = 19/49 (38%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 G DR + G PG AP P PV P G + G G +G Sbjct: 1024 GSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAG 1072 Score = 28.5 bits (62), Expect = 7.6 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Frame = +3 Query: 51 GAPG--RVRAPSGPD----PVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKYRE 212 GAPG R PSGP P P+G E G G + +G + P + P E Sbjct: 403 GAPGFPGARGPSGPQGPSGPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEE 462 Query: 213 GK 218 GK Sbjct: 463 GK 464
>CO9A2_MOUSE (Q07643) Collagen alpha-2(IX) chain precursor| Length = 688 Score = 29.6 bits (65), Expect = 3.4 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRL 161 GAPG P P PV G + CLG + RL Sbjct: 643 GAPGEAGRPGRPGPVGLPGFCEPAACLGASAYTSARL 679
>CO4A2_ASCSU (P27393) Collagen alpha-2(IV) chain precursor| Length = 1763 Score = 29.6 bits (65), Expect = 3.4 Identities = 18/49 (36%), Positives = 21/49 (42%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 G+ R Q G PG V AP P P P+G E G G+ K G Sbjct: 624 GETGFPGPRGQEGLPGKPGIVGAPGLPGPPGPKG---EPGLTGLPEKPG 669 Score = 28.5 bits (62), Expect = 7.6 Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 5/51 (9%) Frame = +3 Query: 48 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLNTGE 185 KG G AP P PV P+G+ G G++ + G G+ PR GE Sbjct: 1186 KGEAGFPGAPGLPGPVGPKGSAGAPGFPGLKGEPGLPGLEGQPGPRGMKGE 1236
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 29.6 bits (65), Expect = 3.4 Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%) Frame = +2 Query: 368 GKAVKDLPSSA-LFGEARVTMRKTA 439 GKAVK PSS+ + G R+TMRKTA Sbjct: 15 GKAVKLSPSSSEISGNGRITMRKTA 39
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 29.6 bits (65), Expect = 3.4 Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%) Frame = +2 Query: 368 GKAVKDLPS-SALFGEARVTMRKTA 439 GKAVK P+ S + GE R+TMRKTA Sbjct: 15 GKAVKLGPTASEIIGEGRITMRKTA 39
>COL2_CAEEL (P17656) Cuticle collagen 2 precursor| Length = 301 Score = 29.6 bits (65), Expect = 3.4 Identities = 15/39 (38%), Positives = 16/39 (41%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 167 G PG PSGP P P G +G G GG P Sbjct: 171 GNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEP 209
>COFA1_MOUSE (O35206) Collagen alpha-1(XV) chain precursor [Contains: Endostatin| (Endostatin-XV)] Length = 1367 Score = 29.6 bits (65), Expect = 3.4 Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG--GRLRPRLNTGER 188 G+PG AP P P P G G G Q G G P + GE+ Sbjct: 632 GSPGEDGAPGEPGPQGPEGQPGLDGASGQQGMKGEKGARGPNGSAGEK 679
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 29.3 bits (64), Expect = 4.4 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +3 Query: 45 WKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGG 155 W+ P R P D V PRG + GC G GG Sbjct: 1624 WRRGPRPRRRPGLTDRVPPRGGPSPRGCRGAGRAGGG 1660
>IE63_SHV21 (P13199) 52 kDa immediate-early phosphoprotein| Length = 417 Score = 29.3 bits (64), Expect = 4.4 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 4/41 (9%) Frame = -3 Query: 158 STARFG----LHSQTTRLVDRASWGDRVRAGRGSHPPRRPF 48 S RFG + S +T + SW DRVR P RPF Sbjct: 85 SPMRFGKRPRISSNSTSRSCKTSWADRVREAAAQRRPSRPF 125
>CO5A2_HUMAN (P05997) Collagen alpha-2(V) chain precursor| Length = 1496 Score = 29.3 bits (64), Expect = 4.4 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = +3 Query: 48 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRL 173 KG PG P P P G + G +GM + G R P L Sbjct: 965 KGDPGEDGQPGPDGPPGPAGTTGQRGIVGMPGQRGERGMPGL 1006
>OTO1_ONCKE (P83371) Otolin-1 precursor| Length = 508 Score = 29.3 bits (64), Expect = 4.4 Identities = 16/57 (28%), Positives = 24/57 (42%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLN 176 GD D+ GAPG + + P+G E+G G++ G R +P N Sbjct: 189 GDKGDKGDQGDTGMPGAPGILGKEGPKGDLGPKGEKGETGLPGLKGDLGERGKPGWN 245
>IF2_DESDG (Q30WJ0) Translation initiation factor IF-2| Length = 984 Score = 29.3 bits (64), Expect = 4.4 Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 7/88 (7%) Frame = +3 Query: 12 ASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG----GRLRPRLNT 179 A + +RA+ P +G P+GP P PR + G P+SG G RP Sbjct: 269 AQAREERAERPDRGPRPAGARPAGPRPGGPRQGDSRPGDGRPAPRSGAPRPGGARPAAGF 328 Query: 180 GERPIA---NKYREGKMKRTLKRESKSI 254 G+ A + + +G+ K+ ++ +++ Sbjct: 329 GQPAQAENSSPFADGQSKKKRQKGRRTV 356
>CXA1_CHICK (P14154) Gap junction alpha-1 protein (Connexin-43) (Cx43)| Length = 380 Score = 29.3 bits (64), Expect = 4.4 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Frame = -1 Query: 253 ILFDSLFKVLFIFPSRYLFAIGLSPVFSLGRS-LPPDLGCIPKQPDSLT 110 ILF S+F+V F+ Y++ LS +++ R P + C +P T Sbjct: 158 ILFKSVFEVAFLLIQWYIYGFSLSAIYTCERDPCPHRVDCFLSRPTEKT 206
>CX56_CHICK (P29415) Gap junction Cx56 protein (Connexin-56)| Length = 510 Score = 29.3 bits (64), Expect = 4.4 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Frame = -1 Query: 253 ILFDSLFKVLFIFPSRYLFAIGLSPVFSLGR-SLPPDLGCIPKQPDSLT 110 I+F +LF+V FI +L+ L PV+ R P + C +P T Sbjct: 174 IIFKTLFEVGFIVGQYFLYGFELKPVYQCSRPPCPHTVDCFISRPTEKT 222
>CO1A2_CHICK (P02467) Collagen alpha-2(I) chain precursor (Fragments)| Length = 1362 Score = 29.3 bits (64), Expect = 4.4 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +3 Query: 48 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRL 173 KG PG V P P P G E G G+ G + P L Sbjct: 619 KGEPGNVGPAGAPGPAGPGGIPGERGVAGVPGGKGEKGAPGL 660 Score = 29.3 bits (64), Expect = 4.4 Identities = 20/59 (33%), Positives = 23/59 (38%), Gaps = 3/59 (5%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAP---RGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKYREGK 218 G PG P P P P RG V E G G + +SG + P P EGK Sbjct: 320 GLPGPRGIPGPPGPAGPSGARGLVGEPGPAGAKGESGNKGEPGAAGPPGPPGPSGEEGK 378 Score = 28.5 bits (62), Expect = 7.6 Identities = 18/55 (32%), Positives = 20/55 (36%) Frame = +3 Query: 3 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRP 167 SG + QV G PG P PV P GA G G Q G + P Sbjct: 955 SGALGAPGPHGQVGPSGKPGNRGDPGPVGPVGPAGAFGPRGLAGPQGPRGEKGEP 1009
>SCA4_RICJA (Q9AJ79) Antigenic heat-stable 120 kDa protein (PS120) (120 kDa| antigen) (Protein PS 120) (rps120) Length = 1018 Score = 29.3 bits (64), Expect = 4.4 Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 1/40 (2%) Frame = +3 Query: 171 LNTGE-RPIANKYREGKMKRTLKRESKSIPPYTTTAPLLA 287 LNT E P+ANK + K+TL++E K TTT L A Sbjct: 7 LNTSEFDPLANKEYTEEQKQTLEQEQKEFLSQTTTPELEA 46
>CUC2C_HAECO (P16252) Cuticle collagen 2C (Fragment)| Length = 210 Score = 29.3 bits (64), Expect = 4.4 Identities = 19/52 (36%), Positives = 21/52 (40%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKY 206 GAPG AP P PRG G G G +P GER + KY Sbjct: 145 GAPGHPGAPGAPGEKGPRGQDGHPGAPGNAGHPGQPGQPG-PPGERGVCPKY 195
>CO3A1_HUMAN (P02461) Collagen alpha-1(III) chain precursor| Length = 1466 Score = 29.3 bits (64), Expect = 4.4 Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 17/64 (26%) Frame = +3 Query: 48 KGAPGRVRAP------------SGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLN 176 +G PG AP P P PRG V SG G SG G PR N Sbjct: 1109 RGFPGNPGAPGSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGN 1168 Query: 177 TGER 188 GER Sbjct: 1169 RGER 1172 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/49 (32%), Positives = 19/49 (38%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 G DR + GAPG P P PV P G + G G +G Sbjct: 1026 GSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAG 1074
>YIS3_YEAST (P40563) Protein YIR003W| Length = 679 Score = 29.3 bits (64), Expect = 4.4 Identities = 15/48 (31%), Positives = 22/48 (45%) Frame = +2 Query: 161 PSKAKYRRETDSEQVPRGKDEKDFEKRVKEYPAIHHHSPTVSEHAHRT 304 PS+ E D +PR + +KDFE V++ + VSE T Sbjct: 319 PSQIASEEENDVPVIPRSRPKKDFEAHVQKEELPNTQEKRVSEECDST 366
>PGCA_MOUSE (Q61282) Aggrecan core protein precursor (Cartilage-specific| proteoglycan core protein) (CSPCP) Length = 2132 Score = 29.3 bits (64), Expect = 4.4 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Frame = +3 Query: 9 DASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQP-KSGGRLRPRLNTG 182 ++ SA+ +VPW P R PSG + +P G+ + SG + SGG + +G Sbjct: 868 ESGSASGDGEVPWSHTPTVGRLPSGGE--SPEGSASASGTGDLSGLPSGGEITETSTSG 924
>EMID2_HUMAN (Q96A83) Collagen alpha-1(XXVI) chain precursor (EMI| domain-containing protein 2) (Emu2 protein) (Emilin and multimerin domain-containing protein 2) Length = 441 Score = 29.3 bits (64), Expect = 4.4 Identities = 17/52 (32%), Positives = 21/52 (40%) Frame = +3 Query: 3 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 158 +GD+ A+ G PG P P P PRG G G Q +G R Sbjct: 286 NGDSRLASAIVDTVLAGVPGPRGPPGPPGPPGPRGPPGPPGTPGSQGLAGER 337
>CO3A1_BOVIN (P04258) Collagen alpha-1(III) chain| Length = 1049 Score = 29.3 bits (64), Expect = 4.4 Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 17/64 (26%) Frame = +3 Query: 48 KGAPGRVRAP------------SGPDPVAPRGAVNESGCLGMQPKSG-----GRLRPRLN 176 +G PG AP P P PRG V SG G SG G PR N Sbjct: 953 RGFPGNPGAPGSPGPAGHQGAVGSPGPAGPRGPVGPSGPPGKDGASGHPGPIGPPGPRGN 1012 Query: 177 TGER 188 GER Sbjct: 1013 RGER 1016 Score = 29.3 bits (64), Expect = 4.4 Identities = 17/49 (34%), Positives = 20/49 (40%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 G + DR + GAPG P P PV P G + G G SG Sbjct: 870 GAPGAKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGETGPAGPSG 918 Score = 28.9 bits (63), Expect = 5.8 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +3 Query: 48 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 158 +G PG P GP P +G SG G K G R Sbjct: 569 QGMPGERGGPGGPGPKGDKGEPGSSGVDGAPGKDGPR 605
>COL39_CAEEL (Q09455) Cuticle collagen 39 precursor| Length = 323 Score = 28.9 bits (63), Expect = 5.8 Identities = 14/36 (38%), Positives = 16/36 (44%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGR 158 G+PG AP P P P G G G Q +G R Sbjct: 138 GSPGPAGAPGAPGPQGPNGQPGHPGQGGSQGPAGPR 173
>CXA8_CHICK (P36381) Gap junction alpha-8 protein (Connexin-45.6) (Cx45.6)| Length = 399 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%) Frame = -1 Query: 253 ILFDSLFKVLFIFPSRYLFAIGLSPVFSLGRSLPPDL-GCIPKQPDSLT 110 I+F +LF+V FI +L+ + P++ GR P+L C +P T Sbjct: 156 IIFKTLFEVGFIVGQYFLYGFRILPLYRCGRWPCPNLVDCFVSRPTEKT 204
>DDEF1_BOVIN (O97902) 130-kDa phosphatidylinositol 4,5-biphosphate-dependent ARF1| GTPase-activating protein (PIP2-dependent ARF1 GAP) (ADP-ribosylation factor-directed GTPase-activating protein 1) (ARF GTPase-activating protein 1) (Development and differe Length = 1129 Score = 28.9 bits (63), Expect = 5.8 Identities = 25/91 (27%), Positives = 37/91 (40%) Frame = +3 Query: 36 QVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKYREG 215 ++P K PG + P P +AP+ + G P G L P+ G+ P + + Sbjct: 935 ELPQKPPPGDL--PPKPTELAPKPPI------GDLPPKPGELPPKPQLGDLPPKPQLAD- 985 Query: 216 KMKRTLKRESKSIPPYTTTAPLLASTHTGHA 308 K + K +PP LLA TG A Sbjct: 986 ---LPPKPQVKDLPPKPQLGELLAKPQTGDA 1013
>SPT5H_BRARE (Q9DDT5) Transcription elongation factor SPT5 (DRB| sensitivity-inducing factor large subunit) (DSIF large subunit) (Protein foggy) Length = 1084 Score = 28.9 bits (63), Expect = 5.8 Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 4/50 (8%) Frame = -3 Query: 164 TESTARFGLHSQ-TTRLVDR---ASWGDRVRAGRGSHPPRRPFPGDLGPV 27 TESTAR LHS T VDR + G + R GR S R P G P+ Sbjct: 726 TESTARVELHSTCQTISVDRQRLTTVGGKERQGRSSTHLRTPMYGSQTPI 775
>RL15_STAES (Q8CRH9) 50S ribosomal protein L15| Length = 146 Score = 28.9 bits (63), Expect = 5.8 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 2/51 (3%) Frame = +3 Query: 48 KGAPG--RVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 194 K A G RVR G G + G G + +SGG++RP G+ P+ Sbjct: 7 KAAEGSRRVRNRVGRGAATGNGKTSGRGQKGQKARSGGKVRPGFEGGQLPL 57
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 28.9 bits (63), Expect = 5.8 Identities = 15/49 (30%), Positives = 19/49 (38%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 G + D + G PG AP P P P G E+G G + G Sbjct: 154 GPPGAPGDPGEAGTPGRPGTDAAPGSPGPRGPPGPAGEAGAPGPAGEPG 202 Score = 28.5 bits (62), Expect = 7.6 Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Frame = +3 Query: 51 GAPGRVRAPSG---PDPVAPRGAVNESGCLGMQPKSG--GRLRPRLNTGERPIANKY 206 G PG AP P P P+GA G G +SG G P GE+ I KY Sbjct: 225 GPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKGICPKY 281
>CO9A2_HUMAN (Q14055) Collagen alpha-2(IX) chain precursor| Length = 689 Score = 28.9 bits (63), Expect = 5.8 Identities = 14/37 (37%), Positives = 16/37 (43%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRL 161 GAPG P P PV G + CLG + RL Sbjct: 644 GAPGEAGRPGLPGPVGLPGFCEPAACLGASAYASARL 680
>HSV2_EMENI (Q5B464) SVP1-like protein 2| Length = 317 Score = 28.9 bits (63), Expect = 5.8 Identities = 22/74 (29%), Positives = 30/74 (40%), Gaps = 5/74 (6%) Frame = -1 Query: 220 IFPSRYLFAIGLSPVFSLGRSLP-----PDLGCIPKQPDSLTAPRGATGSGPDGALTLPG 56 +F Y FA S F LG P P LG + +P P+G G D + + G Sbjct: 231 VFSDVYSFA---SAHFELGEEEPGPTYAPPLGTVLGRP-----PKGVIGWSNDNTILVVG 282 Query: 55 APFQGTWARSVAED 14 + G W + V D Sbjct: 283 SGSDGRWEKFVLRD 296
>CNTP4_HUMAN (Q9C0A0) Contactin-associated protein-like 4 precursor (Cell| recognition molecule Caspr4) Length = 1308 Score = 28.9 bits (63), Expect = 5.8 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +3 Query: 75 PSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNT 179 PS PDPV G V ES C+ QP + R R ++ Sbjct: 1185 PSHPDPVTVTGHVTESSCMA-QPGTDATSRERTHS 1218
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%) Frame = +2 Query: 368 GKAVKDLPSSA-LFGEARVTMRKTA 439 GKAVK PSS+ + G +VTMRKTA Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTA 39
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%) Frame = +2 Query: 368 GKAVKDLPSSA-LFGEARVTMRKTA 439 GKAVK PSS+ + G +VTMRKTA Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTA 39
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 28.9 bits (63), Expect = 5.8 Identities = 16/24 (66%), Positives = 18/24 (75%), Gaps = 1/24 (4%) Frame = +2 Query: 368 GKAVKDLP-SSALFGEARVTMRKT 436 GKAVK P +S +FG RVTMRKT Sbjct: 15 GKAVKLSPGASEVFGTGRVTMRKT 38
>CO2A1_BOVIN (P02459) Collagen alpha-1(II) chain precursor (Fragments)| Length = 747 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/34 (41%), Positives = 18/34 (52%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 GAPG AP P P P G +G LG + ++G Sbjct: 238 GAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTG 271
>YGIK_SALTY (P40800) Hypothetical protein ygiK| Length = 435 Score = 28.5 bits (62), Expect = 7.6 Identities = 16/36 (44%), Positives = 22/36 (61%) Frame = -1 Query: 253 ILFDSLFKVLFIFPSRYLFAIGLSPVFSLGRSLPPD 146 +LF S F ++ FAIGLS +FS+ +LPPD Sbjct: 11 VLFGS-FAIILAVGVPITFAIGLSSLFSILIALPPD 45
>Y1491_METJA (Q58886) Hypothetical protein MJ1491| Length = 127 Score = 28.5 bits (62), Expect = 7.6 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%) Frame = -1 Query: 298 VCVLANSGAVVVYGGILFDSLFKVL-FIFPSRYLFAIGLSPVFSLGRS 158 +C N G V G++ + +L F+F S YL A+GL G S Sbjct: 51 ICDYENCGLVGAISGVIGGVIASILSFLFMSAYLSALGLKAAMFTGAS 98
>CAS4_EPHMU (P18503) Short-chain collagen C4 (Fragment)| Length = 366 Score = 28.5 bits (62), Expect = 7.6 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +3 Query: 48 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 +GAPG AP P P P+G + G G + G Sbjct: 48 QGAPGAPGAPGLPGPAGPQGPKGDKGLPGNDGQPG 82
>CO8A2_HUMAN (P25067) Collagen alpha-2(VIII) chain precursor (Endothelial| collagen) Length = 703 Score = 28.5 bits (62), Expect = 7.6 Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGA---VNESGCLGMQPKSGGRLRPRLNTGERP 191 G+PG P P P P GA +E+G G+ +GG L G +P Sbjct: 513 GSPGITGPPGPPGPPGPPGAPGAFDETGIAGLHLPNGGVEGAVLGKGGKP 562
>EFNB3_MOUSE (O35393) Ephrin-B3 precursor| Length = 340 Score = 28.5 bits (62), Expect = 7.6 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 3/65 (4%) Frame = -1 Query: 190 GLSPVFSLGRSLPPDLGCIPKQPDS---LTAPRGATGSGPDGALTLPGAPFQGTWARSVA 20 G+ + +G+S P G +P++P S + RGA S G T+PG P +R Sbjct: 160 GMKVLLRVGQS--PRGGAVPRKPVSEMPMERDRGAAHSAEPGRDTIPGDPSSNATSRGAE 217 Query: 19 EDASP 5 P Sbjct: 218 GPLPP 222
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 28.5 bits (62), Expect = 7.6 Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 1/25 (4%) Frame = +2 Query: 368 GKAVKDLPSSA-LFGEARVTMRKTA 439 GK VK PSS+ + G R+TMRKTA Sbjct: 15 GKTVKLAPSSSEITGNGRITMRKTA 39
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 28.5 bits (62), Expect = 7.6 Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%) Frame = +2 Query: 368 GKAVKDLPSSA-LFGEARVTMRKTA 439 GKAVK PSS+ + G +VTMRKTA Sbjct: 14 GKAVKLSPSSSEVTGNGKVTMRKTA 38
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 28.5 bits (62), Expect = 7.6 Identities = 16/25 (64%), Positives = 19/25 (76%), Gaps = 1/25 (4%) Frame = +2 Query: 368 GKAVKDLPSSA-LFGEARVTMRKTA 439 GKAVK PSS+ + G +VTMRKTA Sbjct: 14 GKAVKLSPSSSEVTGNGKVTMRKTA 38
>CO6A1_HUMAN (P12109) Collagen alpha-1(VI) chain precursor| Length = 1028 Score = 28.1 bits (61), Expect = 9.9 Identities = 20/55 (36%), Positives = 23/55 (41%), Gaps = 6/55 (10%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGR-----VRAPSG-PDPVAPRGAVNESGCLGMQPKSG 152 G+ A D GAPG R P G P P PRG E+G G Q + G Sbjct: 404 GEKGEAGDEGNPGPDGAPGERGGPGERGPRGTPGPRGPRGDPGEAGPQGDQGREG 458
>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor| Length = 1022 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/53 (32%), Positives = 21/53 (39%) Frame = +3 Query: 6 GDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLR 164 GDA +R KG PGR P P +G+ G G Q G + R Sbjct: 358 GDAGDQGERGDEGMKGDPGRPGRSGPPGPPGEKGSPGIPGNPGAQGPGGTKGR 410
>RCOR2_HUMAN (Q8IZ40) REST corepressor 2| Length = 523 Score = 28.1 bits (61), Expect = 9.9 Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 6/52 (11%) Frame = -1 Query: 181 PVFSLGRSLPPDLGCIPKQPD------SLTAPRGATGSGPDGALTLPGAPFQ 44 P GR L P L P QP +L APR + GP TL GAP + Sbjct: 468 PPLQQGRFLQPRLA--PNQPPPPLIRPALAAPRHSARPGPQPPPTLIGAPLE 517
>CO1A2_HUMAN (P08123) Collagen alpha-2(I) chain precursor| Length = 1366 Score = 28.1 bits (61), Expect = 9.9 Identities = 21/56 (37%), Positives = 24/56 (42%) Frame = +3 Query: 48 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKYREG 215 KG PG V A P P G E G G+ G + P L GE I N R+G Sbjct: 621 KGEPGVVGAVGTAGPSGPSGLPGERGAAGIPGGKGEKGEPGLR-GE--IGNPGRDG 673
>GRASP_RAT (Q8R4T5) General receptor for phosphoinositides 1-associated| scaffold protein (GRP1-associated scaffold protein) (Tamalin) (95 kDa postsynaptic density protein discs-large ZO-1 domain-containing protein) (PSD-95 PDZ domain-containing protein) Length = 394 Score = 28.1 bits (61), Expect = 9.9 Identities = 20/49 (40%), Positives = 22/49 (44%) Frame = -1 Query: 151 PDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAEDASP 5 PDL + PDS A T SGP A PGAP G + ED P Sbjct: 19 PDLA--GRAPDSEAARAAPTPSGPPAAAAPPGAP--GDELYAALEDYHP 63
>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)| (LC collagen) Length = 2944 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/50 (38%), Positives = 21/50 (42%) Frame = +3 Query: 3 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 +G A D KG PGR P P PV PRG E G G + G Sbjct: 1600 TGRAGPPGDSGPPGEKGDPGR---PGPPGPVGPRGRDGEVGEKGDEGPPG 1646
>CAC1A_RAT (P54282) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide, isoform 4) (Brain calcium channel I) (BI) (RAT brain class A) (RBA-I) Length = 2212 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -2 Query: 84 GRTGLSPSQAPLSRGLGPGPSLRTRLQ 4 G +GL PS A + PGP+L T Q Sbjct: 1044 GHSGLPPSPAKIGNSTNPGPALATNPQ 1070
>CAC1A_MOUSE (P97445) Voltage-dependent P/Q-type calcium channel alpha-1A subunit| (Voltage-gated calcium channel alpha subunit Cav2.1) (Calcium channel, L type, alpha-1 polypeptide isoform 4) (Brain calcium channel I) (BI) Length = 2164 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -2 Query: 84 GRTGLSPSQAPLSRGLGPGPSLRTRLQ 4 G +GL PS A + PGP+L T Q Sbjct: 996 GHSGLPPSPAKIGNSTNPGPALATNPQ 1022
>1C02_HUMAN (P30501) HLA class I histocompatibility antigen, Cw-2 alpha chain| precursor (MHC class I antigen Cw*2) Length = 366 Score = 28.1 bits (61), Expect = 9.9 Identities = 15/46 (32%), Positives = 23/46 (50%) Frame = -3 Query: 167 WTESTARFGLHSQTTRLVDRASWGDRVRAGRGSHPPRRPFPGDLGP 30 W T ++ +QT R+ R G ++ GSH +R + DLGP Sbjct: 84 WDRETQKYNRQAQTDRVNLRKLRGYYNQSEAGSHTLQRMYGCDLGP 129
>Y2127_STRCO (P40182) Hypothetical protein SCO2127| Length = 191 Score = 28.1 bits (61), Expect = 9.9 Identities = 19/52 (36%), Positives = 24/52 (46%) Frame = -1 Query: 169 LGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTWARSVAED 14 + LPP P + D++ R ATG GA PGA WA + AED Sbjct: 1 MSEELPPSEAPRPDEADAVDETR-ATGE-TRGAAQEPGASDADAWATACAED 50
>COLE_LEPMA (P98085) Inner ear-specific collagen precursor (Saccular collagen)| Length = 419 Score = 28.1 bits (61), Expect = 9.9 Identities = 22/73 (30%), Positives = 28/73 (38%) Frame = +3 Query: 3 SGDASSATDRAQVPWKGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTG 182 +GD D+ V G PG P +G E G G++ G R P LN Sbjct: 105 NGDIGEKGDQGPVGLPGVPGIPGKPGEKGDPGLKGDKGERGFSGLKGDPGERGEPGLNGT 164 Query: 183 ERPIANKYREGKM 221 + I REG M Sbjct: 165 KGSIG---REGPM 174
>COHA1_HUMAN (Q9UMD9) Collagen alpha-1(XVII) chain (Bullous pemphigoid antigen 2)| (180 kDa bullous pemphigoid antigen 2) Length = 1497 Score = 28.1 bits (61), Expect = 9.9 Identities = 16/39 (41%), Positives = 17/39 (43%) Frame = +3 Query: 48 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLR 164 KG G P P P PRG E G G Q +G R R Sbjct: 1452 KGDRGPAGPPGHPGPPGPRGHKGEKGDKGDQVYAGRRRR 1490
>COBA2_MOUSE (Q64739) Collagen alpha-2(XI) chain precursor| Length = 1736 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = +3 Query: 48 KGAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 KG PG V AP PV P G + G G++ G Sbjct: 1338 KGDPGAVGAPGKTGPVGPAGLAGKPGPDGLRGLPG 1372 Score = 28.1 bits (61), Expect = 9.9 Identities = 13/34 (38%), Positives = 17/34 (50%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSG 152 G G+ P P V P+G ESG +G + SG Sbjct: 913 GFQGKTGPPGPPGVVGPQGTAGESGPMGERGHSG 946
>CO1A2_RAT (P02466) Collagen alpha-2(I) chain precursor| Length = 1372 Score = 28.1 bits (61), Expect = 9.9 Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 12/68 (17%) Frame = +3 Query: 51 GAPGRVRAPSGPDP------------VAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPI 194 G PG AP P P PRG V E G G + ++G + P + P Sbjct: 319 GLPGVAGAPGLPGPRGIPGPVGAAGATGPRGLVGEPGPAGSKGETGNKGEPGSAGAQGPP 378 Query: 195 ANKYREGK 218 EGK Sbjct: 379 GPSGEEGK 386
>CAFF_RIFPA (P30754) Fibril-forming collagen alpha chain (Fragment)| Length = 1027 Score = 28.1 bits (61), Expect = 9.9 Identities = 18/54 (33%), Positives = 23/54 (42%), Gaps = 8/54 (14%) Frame = +3 Query: 48 KGAPGRVRAPSGPDPVAPRGAVNESGCLGM--------QPKSGGRLRPRLNTGE 185 +G PG P PRGA E+G G QP GR+ PR +G+ Sbjct: 951 QGTPGHSGESGPPGAPGPRGARGEAGGRGSQGPPGKDGQPGPSGRVGPRGPSGD 1004
>FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related protein FKHL7)| (Forkhead-related transcription factor 3) (FREAC-3) Length = 553 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/52 (32%), Positives = 26/52 (50%) Frame = -1 Query: 190 GLSPVFSLGRSLPPDLGCIPKQPDSLTAPRGATGSGPDGALTLPGAPFQGTW 35 G++P +LG + P + P S T+ G++G G GA GA GT+ Sbjct: 343 GIAPPLALG-AYSPGQSSLYSSPCSQTSSAGSSGGGGGGAGAAGGAGGAGTY 393
>YXWK_CAEEL (Q21184) Putative cuticle collagen F55C10.3| Length = 266 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/52 (32%), Positives = 21/52 (40%) Frame = +3 Query: 51 GAPGRVRAPSGPDPVAPRGAVNESGCLGMQPKSGGRLRPRLNTGERPIANKY 206 G PG P P P P G + G G P + G+ GE+ I KY Sbjct: 201 GQPGHDGQPGAPGPKGPNGNPGQPGADG-NPGAPGQSGTPGGVGEKGICPKY 251 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,588,291 Number of Sequences: 219361 Number of extensions: 1389493 Number of successful extensions: 6873 Number of sequences better than 10.0: 105 Number of HSP's better than 10.0 without gapping: 5295 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6793 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
