ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet71c04 |
|---|---|
| Clone Library Name | barley_pub |
>STABP_XENLA (Q63ZM7) STAM-binding protein-like (EC 3.1.2.15)| Length = 416 Score = 33.1 bits (74), Expect = 0.37 Identities = 19/77 (24%), Positives = 41/77 (53%), Gaps = 3/77 (3%) Frame = +3 Query: 225 EFSGWKPRQRLEVVTQRLATSIFQEMDREEMKMVILRQEQTFRQQV---HEMHRVYHVQK 395 E+ + +QR E + ++ Q++D E+ ++ +L+Q+Q ++QV EM R ++ Sbjct: 117 EYEEYSEKQRKEEEERARRLALQQQLDAEKQRVALLKQQQEQQEQVQAFEEMMRRKELEA 176 Query: 396 QLMRETQIAGKNQAHAE 446 + +R K++ AE Sbjct: 177 ERLRILHQFSKDEPEAE 193
>CJ011_MOUSE (Q9D9B4) Protein C10orf11 homolog| Length = 229 Score = 30.4 bits (67), Expect = 2.4 Identities = 28/92 (30%), Positives = 44/92 (47%) Frame = -3 Query: 464 LELRFRLSVSLVLPSYLRLPHQLFLNMVNSVHLMNLLSECLFLPQDNHLHLLSVHLLENA 285 L+L F L SL S R +L L+ NLL + L LP HLH L+++ + Sbjct: 36 LDLSFNLLRSLEGLSAFRSLEELILDN-------NLLGDDLVLPGLPHLHTLTLNKNQIT 88 Query: 284 SCKSLCDYLQSLSWFPAAEFRSQRRHSLCLSE 189 + L D+L ++ P+ E+ S + C +E Sbjct: 89 DLEYLLDHLAEVT--PSLEYLSLLGNVACPNE 118
>SPEN_DROME (Q8SX83) Protein split ends| Length = 5560 Score = 30.4 bits (67), Expect = 2.4 Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 12/94 (12%) Frame = +3 Query: 210 PSLGAEFSGWKPRQRLEVVTQRLATSIFQEMDREEMKMVILRQEQTFRQQVH-------- 365 P + + +Q+ +V+ + A Q M + + +I RQ+ +QQ+H Sbjct: 3803 PHKNVHLNAHQNQQQPQVIAKMTAHQHQQHMQQFMHQQMIQRQQHMQQQQLHGQSQQITS 3862 Query: 366 ----EMHRVYHVQKQLMRETQIAGKNQAHAETKP 455 +MH+ + Q+Q Q Q HA+ P Sbjct: 3863 APQHQMHQQHQAQQQQQHHNQQHLNQQLHAQQHP 3896
>EPIPL_HUMAN (P58107) Epiplakin (450 kDa epidermal antigen)| Length = 5065 Score = 30.4 bits (67), Expect = 2.4 Identities = 15/37 (40%), Positives = 19/37 (51%) Frame = -1 Query: 277 SLCVTTSNLCLGFQPLNSAPKEGTPSASPREAFLSYS 167 +LCVT L F PL+ P+ G P P F+ YS Sbjct: 428 ALCVTDPETGLAFLPLSGGPRGGEPQGPP---FIKYS 461
>STABP_HUMAN (O95630) STAM-binding protein (EC 3.1.2.15) (Associated molecule| with the SH3 domain of STAM) Length = 424 Score = 30.4 bits (67), Expect = 2.4 Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 3/86 (3%) Frame = +3 Query: 180 KASLGEAEGVPSLGAEFSGWKPRQRLEVVTQRLATSIFQEMDREEMKMVILRQEQTFRQQ 359 KA +AE + E++ + ++ E +I QE+++E+ ++ +Q+Q ++Q Sbjct: 102 KAEELKAELLKRYTKEYTEYNEEKKKEAEELARNMAIQQELEKEKQRVAQQKQQQLEQEQ 161 Query: 360 VH---EMHRVYHVQKQLMRETQIAGK 428 H EM R ++K+ ++ Q GK Sbjct: 162 FHAFEEMIRNQELEKERLKIVQEFGK 187
>MATK_POROL (Q3MKB9) Maturase K (Intron maturase)| Length = 509 Score = 30.0 bits (66), Expect = 3.1 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 1/104 (0%) Frame = -3 Query: 419 YLRLPHQLFLNMVNSVHLMNLLSECLFLPQD-NHLHLLSVHLLENASCKSLCDYLQSLSW 243 +L L + L + + +HL L+ + +D + LHLL L E +C SL +S+S Sbjct: 142 FLHLNYALEILIPYPIHLEILVQTLRYWVKDASSLHLLRFFLYEYRNCNSLITPPKSISI 201 Query: 242 FPAAEFRSQRRHSLCLSERSFPLLQLQFVYQARALLVLRCKQAS 111 F + ++R F L V + +L V C Q+S Sbjct: 202 FSKS------------NQRLFLFLYNFHVCEYESLFVFLCNQSS 233
>OLFI9_RAT (P23272) Olfactory receptor-like protein I9| Length = 314 Score = 30.0 bits (66), Expect = 3.1 Identities = 21/53 (39%), Positives = 25/53 (47%) Frame = -3 Query: 425 PSYLRLPHQLFLNMVNSVHLMNLLSECLFLPQDNHLHLLSVHLLENASCKSLC 267 P Y L + LFL M + L NL+ L L D+HLH L N S LC Sbjct: 21 PEYQHLFYALFLAMYLTTLLGNLIIIILIL-LDSHLHTPMYLFLSNLSFADLC 72
>YHY6_YEAST (P38873) Hypothetical 175.8 kDa Trp-Asp repeats-containing protein| in GND1-IKI1 intergenic region Length = 1541 Score = 30.0 bits (66), Expect = 3.1 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%) Frame = +3 Query: 324 VILRQEQTFRQQVHEMH-RVYHVQKQLMRETQIAGKNQAHAE 446 VILR +Q F +Q ++H ++ H+Q Q + Q + + Q H E Sbjct: 801 VILRLQQEFEEQYQQLHSQLQHLQNQSHLQQQQSQQQQQHLE 842
>O1500_RAT (P23273) Olfactory receptor 1500 (Olfactory receptor-like protein| I14) Length = 312 Score = 30.0 bits (66), Expect = 3.1 Identities = 24/61 (39%), Positives = 32/61 (52%), Gaps = 1/61 (1%) Frame = -3 Query: 446 LSVSLVLPS-YLRLPHQLFLNMVNSVHLMNLLSECLFLPQDNHLHLLSVHLLENASCKSL 270 L + L +PS Y L + LFL M ++ L NLL L + D+HLH+ L N S L Sbjct: 13 LLLGLPIPSEYHLLFYALFLAMYLTIILGNLLIIVL-VRLDSHLHMPMYLFLSNLSFSDL 71 Query: 269 C 267 C Sbjct: 72 C 72
>STABP_MOUSE (Q9CQ26) STAM-binding protein (EC 3.1.2.15) (Associated molecule| with the SH3 domain of STAM) Length = 424 Score = 30.0 bits (66), Expect = 3.1 Identities = 18/71 (25%), Positives = 39/71 (54%), Gaps = 3/71 (4%) Frame = +3 Query: 225 EFSGWKPRQRLEVVTQRLATSIFQEMDREEMKMVILRQEQTFRQQVH---EMHRVYHVQK 395 E+ +K R++ E +I QE+++E+ ++ +Q+Q ++Q H EM + ++K Sbjct: 117 EYEQYKERKKKEEEELARNIAIQQELEKEKQRVAQQKQKQLEQEQFHAFEEMIQRQELEK 176 Query: 396 QLMRETQIAGK 428 + ++ Q GK Sbjct: 177 ERLKIVQEFGK 187
>MRAY_CHLTR (O84762) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC| 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase) Length = 336 Score = 29.6 bits (65), Expect = 4.1 Identities = 19/72 (26%), Positives = 28/72 (38%) Frame = -1 Query: 346 VCSCLRITIFISSLSISWKMLVASLCVTTSNLCLGFQPLNSAPKEGTPSASPREAFLSYS 167 V +CL + + + W + L T + CLGF N SP F+ + Sbjct: 194 VIACLGMLVVACTNGAPWAFICCVLLATLAGSCLGFLRYNK---------SPARVFMGDT 244 Query: 166 YSLFTRPELCLC 131 SLF L +C Sbjct: 245 GSLFLGAMLGMC 256
>MRAY_CHLTA (Q3KKT5) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC| 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase) Length = 336 Score = 29.6 bits (65), Expect = 4.1 Identities = 19/72 (26%), Positives = 28/72 (38%) Frame = -1 Query: 346 VCSCLRITIFISSLSISWKMLVASLCVTTSNLCLGFQPLNSAPKEGTPSASPREAFLSYS 167 V +CL + + + W + L T + CLGF N SP F+ + Sbjct: 194 VIACLGMLVVACTNGAPWAFICCVLLATLAGSCLGFLRYNK---------SPARVFMGDT 244 Query: 166 YSLFTRPELCLC 131 SLF L +C Sbjct: 245 GSLFLGAMLGMC 256
>SYA_PSESM (Q885J0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 874 Score = 29.6 bits (65), Expect = 4.1 Identities = 17/41 (41%), Positives = 18/41 (43%) Frame = +2 Query: 311 GDEDGYPEARTNIQTTGS*DAPSLPCSETADEGDADSWEEP 433 GD G P A N T G P PCSE + AD W P Sbjct: 156 GDNKGAPYASDNFWTMGD-TGPCGPCSEIFFDHGADIWGGP 195
>SOX5_MOUSE (P35710) Transcription factor SOX-5| Length = 763 Score = 29.6 bits (65), Expect = 4.1 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 19/97 (19%) Frame = +3 Query: 186 SLGEAEGVPSLGAEFSGWKPRQRLEVVTQ----------------RLATSIFQEMDREEM 317 + GE +G P AE K RQ + ++ Q +LA S E R++M Sbjct: 184 NFGEIKGTPESLAE----KERQLMGMINQLTSLREQLLAAHDEQKKLAASQI-EKQRQQM 238 Query: 318 KMVILRQEQTFRQQ---VHEMHRVYHVQKQLMRETQI 419 ++ +QEQ RQQ + + H++ +Q+Q+ + Q+ Sbjct: 239 ELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQL 275
>SOX5_HUMAN (P35711) Transcription factor SOX-5| Length = 763 Score = 29.6 bits (65), Expect = 4.1 Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 19/97 (19%) Frame = +3 Query: 186 SLGEAEGVPSLGAEFSGWKPRQRLEVVTQ----------------RLATSIFQEMDREEM 317 + GE +G P AE K RQ + ++ Q +LA S E R++M Sbjct: 184 NFGEIKGTPESLAE----KERQLMGMINQLTSLREQLLAAHDEQKKLAASQI-EKQRQQM 238 Query: 318 KMVILRQEQTFRQQ---VHEMHRVYHVQKQLMRETQI 419 ++ +QEQ RQQ + + H++ +Q+Q+ + Q+ Sbjct: 239 ELAKQQQEQIARQQQQLLQQQHKINLLQQQIQVQGQL 275
>POL2_GFLV (P18474) RNA2 polyprotein (P2) [Contains: P2A protein (2A);| Movement protein (2B-MP); Coat protein (2C-CP)] Length = 1109 Score = 29.6 bits (65), Expect = 4.1 Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 14/99 (14%) Frame = -3 Query: 446 LSVSLVLPSY---LRLPHQLF--LNMVNSVHLMNLLSECLFLPQD-----NHLHLLSVHL 297 ++ LV+P++ +RLP F L V S N ++ + D + H L H Sbjct: 646 ITAGLVMPTFKIVIRLPANAFTGLTWVMSFDAYNRITSRITASADPVYTLSVPHWLIHHK 705 Query: 296 LENASCK----SLCDYLQSLSWFPAAEFRSQRRHSLCLS 192 L SC+ LC + WF + F S R H CL+ Sbjct: 706 LGTFSCEIDYGELCGHAM---WFKSTTFESPRLHFTCLT 741
>TRHY_HUMAN (Q07283) Trichohyalin| Length = 1898 Score = 29.6 bits (65), Expect = 4.1 Identities = 14/41 (34%), Positives = 27/41 (65%) Frame = +3 Query: 294 QEMDREEMKMVILRQEQTFRQQVHEMHRVYHVQKQLMRETQ 416 Q++ R+E + L++EQ R+Q E+ R + ++QL +ET+ Sbjct: 1653 QQLRRQERERKFLQEEQQLRRQ--ELERKFREEEQLRQETE 1691 Score = 29.6 bits (65), Expect = 4.1 Identities = 16/55 (29%), Positives = 31/55 (56%) Frame = +3 Query: 294 QEMDREEMKMVILRQEQTFRQQVHEMHRVYHVQKQLMRETQIAGKNQAHAETKPK 458 Q++ R+E + L +EQ RQ E HR + ++QL++E + + Q H + + + Sbjct: 1393 QQVRRQERERKFLEEEQQLRQ---ERHRKFREEEQLLQERE---EQQLHRQERDR 1441
>STABP_RAT (Q8R424) STAM-binding protein (EC 3.1.2.15) (Associated molecule| with the SH3 domain of STAM) Length = 424 Score = 29.6 bits (65), Expect = 4.1 Identities = 15/65 (23%), Positives = 37/65 (56%) Frame = +3 Query: 225 EFSGWKPRQRLEVVTQRLATSIFQEMDREEMKMVILRQEQTFRQQVHEMHRVYHVQKQLM 404 E+ +K R++ E +I QE+++E+ ++ +Q+Q ++Q H ++ +QKQ + Sbjct: 117 EYEQYKERKKKEEEELARNIAIQQELEKEKQRVAQQKQKQLEQEQFHAFEKM--IQKQEL 174 Query: 405 RETQI 419 + ++ Sbjct: 175 EKERL 179
>SOX6_HUMAN (P35712) Transcription factor SOX-6| Length = 828 Score = 29.3 bits (64), Expect = 5.3 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 19/90 (21%) Frame = +3 Query: 189 LGEAEGVPSLGAEFSGWKPRQRLEVVTQ----------------RLATSIFQEMDREEMK 320 LGE +G P AE K RQ ++TQ +LA S E R++M Sbjct: 174 LGEIKGTPESLAE----KERQLSTMITQLISLREQLLAAHDEQKKLAASQI-EKQRQQMD 228 Query: 321 MVILRQEQTFRQQ---VHEMHRVYHVQKQL 401 + +QEQ RQQ + + H++ +Q+Q+ Sbjct: 229 LARQQQEQIARQQQQLLQQQHKINLLQQQI 258
>SOX6_MOUSE (P40645) Transcription factor SOX-6 (SOX-LZ)| Length = 827 Score = 29.3 bits (64), Expect = 5.3 Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 19/90 (21%) Frame = +3 Query: 189 LGEAEGVPSLGAEFSGWKPRQRLEVVTQ----------------RLATSIFQEMDREEMK 320 LGE +G P AE K RQ ++TQ +LA S E R++M Sbjct: 174 LGEIKGTPESLAE----KERQLSTMITQLISLREQLLAAHDEQKKLAASQI-EKQRQQMD 228 Query: 321 MVILRQEQTFRQQ---VHEMHRVYHVQKQL 401 + +QEQ RQQ + + H++ +Q+Q+ Sbjct: 229 LARQQQEQIARQQQQLLQQQHKINLLQQQI 258
>ISPD_NEIMB (Q9JYM4) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase| (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT) Length = 229 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Frame = +3 Query: 216 LGAEFSGWKPRQRLEVVTQRL---ATSIFQEMDREEMKMVILRQEQTFRQQV 362 +GA F KP+Q +E+ ++ + IF+ + ++ +V++ E TF +V Sbjct: 14 IGARFGADKPKQYVEIGSKTVLEHTIGIFERHEAVDLTVVVVSPEDTFADKV 65
>ISPD_NEIMA (Q9JTM3) 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase| (EC 2.7.7.60) (4-diphosphocytidyl-2C-methyl-D-erythritol synthase) (MEP cytidylyltransferase) (MCT) Length = 229 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/52 (26%), Positives = 29/52 (55%), Gaps = 3/52 (5%) Frame = +3 Query: 216 LGAEFSGWKPRQRLEVVTQRL---ATSIFQEMDREEMKMVILRQEQTFRQQV 362 +GA F KP+Q +E+ ++ + IF+ + ++ +V++ E TF +V Sbjct: 14 IGARFGADKPKQYVEIGSKTVLEHTIGIFERHEAVDLTVVVVSPEDTFADKV 65
>PFR1_TRYBB (P22225) 69 kDa paraflagellar rod protein (69 kDa PFR protein)| (PFR-A/PFR-B) Length = 600 Score = 28.9 bits (63), Expect = 6.9 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 7/49 (14%) Frame = +3 Query: 213 SLGAEFSGWKPRQRLEVVTQRLATSIFQEM-------DREEMKMVILRQ 338 +L + W+ Q LE V QRL T F+E+ DREE + V +Q Sbjct: 333 NLDKQDEAWRRIQELERVLQRLGTERFEEVKRRIEENDREEKRKVEYQQ 381
>TR240_HUMAN (Q9UHV7) Thyroid hormone receptor-associated protein complex 240 kDa| component (Trap240) (Thyroid hormone receptor-associated protein 1) (Vitamin D3 receptor-interacting protein complex component DRIP250) (DRIP 250) (Activator-recruited cofac Length = 2174 Score = 28.9 bits (63), Expect = 6.9 Identities = 17/38 (44%), Positives = 20/38 (52%) Frame = -1 Query: 340 SCLRITIFISSLSISWKMLVASLCVTTSNLCLGFQPLN 227 SC I +F +S S+ VAS TT NL L F P N Sbjct: 1956 SCTHILVFPTSASVQ----VASATYTTENLDLAFNPNN 1989
>ASPM_MACMU (P62292) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3479 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = +3 Query: 174 ERKASLGEAEGVPSLGAEFSGWKPRQRLEVVTQRLATSIFQE 299 ERK+ L + V ++ A F G K RQ+L++V++ +I + Sbjct: 2734 ERKSFLPVQKSVRTIQAAFRGMKVRQKLKIVSEEKMAAIVNQ 2775
>ASPM_MACFA (P62291) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3476 Score = 28.9 bits (63), Expect = 6.9 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = +3 Query: 174 ERKASLGEAEGVPSLGAEFSGWKPRQRLEVVTQRLATSIFQE 299 ERK+ L + V ++ A F G K RQ+L++V++ +I + Sbjct: 2731 ERKSFLPVQKSVRTIQAAFRGMKVRQKLKIVSEEKMAAIVNQ 2772
>HIS82_LEGPL (Q5WV43) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase 2) Length = 369 Score = 28.9 bits (63), Expect = 6.9 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 428 LPSYLRL-PHQLFLNMVNSVHLMNLLSECLFLPQDNHL 318 L SYL++ P QLFL+ S +L N+L C L D H+ Sbjct: 80 LASYLKVKPEQLFLSN-GSDYLFNILLNCFALHTDRHI 116
>HIS82_LEGPH (Q5ZU10) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase 2) Length = 369 Score = 28.9 bits (63), Expect = 6.9 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 428 LPSYLRL-PHQLFLNMVNSVHLMNLLSECLFLPQDNHL 318 L SYL++ P QLFL+ S +L N+L C L D H+ Sbjct: 80 LASYLKVKPEQLFLSN-GSDYLFNILLNCFALHTDRHI 116
>HIS82_LEGPA (Q5X3Q5) Histidinol-phosphate aminotransferase 2 (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase 2) Length = 369 Score = 28.9 bits (63), Expect = 6.9 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -3 Query: 428 LPSYLRL-PHQLFLNMVNSVHLMNLLSECLFLPQDNHL 318 L SYL++ P QLFL+ S +L N+L C L D H+ Sbjct: 80 LASYLKVKPEQLFLSN-GSDYLFNILLNCFALHTDRHI 116
>POL2_GFLVN (Q91HK5) RNA2 polyprotein (P2) [Contains: P2A protein (2A);| Movement protein (2B-MP); Coat protein (2C-CP)] Length = 1110 Score = 28.5 bits (62), Expect = 9.1 Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 14/99 (14%) Frame = -3 Query: 446 LSVSLVLPSY---LRLPHQLF--LNMVNSVHLMNLLSECLFLPQD-----NHLHLLSVHL 297 ++ LV+P++ +RLP F L V S N ++ + D + H L H Sbjct: 647 ITAGLVMPTFKIVIRLPANAFTGLTWVMSFDAYNRITSRITTSADPVYTLSVPHWLIHHK 706 Query: 296 LENASCK----SLCDYLQSLSWFPAAEFRSQRRHSLCLS 192 L SC+ LC + WF + F S + H CL+ Sbjct: 707 LGTFSCEIDYGELCGHAM---WFKSTTFESPKLHFTCLT 742
>MED12_HUMAN (Q93074) Mediator of RNA polymerase II transcription subunit 12| (Thyroid hormone receptor-associated protein complex 230 kDa component) (Trap230) (Activator-recruited cofactor 240 kDa component) (ARC240) (CAG repeat protein 45) (OPA-containin Length = 2212 Score = 28.5 bits (62), Expect = 9.1 Identities = 12/36 (33%), Positives = 20/36 (55%) Frame = -1 Query: 337 CLRITIFISSLSISWKMLVASLCVTTSNLCLGFQPL 230 C +T + SLS W ++ +LC +++N GF L Sbjct: 1113 CAELTGYCKSLSAEWLGVLKALCCSSNNGTCGFNDL 1148
>SAFB1_RAT (O88453) Scaffold attachment factor B (Scaffold attachment factor| B1) (SAF-B) Length = 931 Score = 28.5 bits (62), Expect = 9.1 Identities = 18/78 (23%), Positives = 39/78 (50%), Gaps = 4/78 (5%) Frame = +3 Query: 246 RQRLEVVTQRLATSIF----QEMDREEMKMVILRQEQTFRQQVHEMHRVYHVQKQLMRET 413 R+RLE+ +RLA + M+RE ++ + EQ R+ E R++ +++L R+ Sbjct: 665 RERLEIARERLAFHRHRLERERMERERLERERMHVEQERRR---EQERIHREREELRRQQ 721 Query: 414 QIAGKNQAHAETKPKLEI 467 ++ + + + E+ Sbjct: 722 ELRYEQERRPAVRRPYEV 739
>MRAY_CHLMU (Q9PLG6) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC| 2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase) Length = 335 Score = 28.5 bits (62), Expect = 9.1 Identities = 20/72 (27%), Positives = 28/72 (38%) Frame = -1 Query: 346 VCSCLRITIFISSLSISWKMLVASLCVTTSNLCLGFQPLNSAPKEGTPSASPREAFLSYS 167 V +CL + I + W + L T + CLGF N SP F+ + Sbjct: 193 VIACLGMLIVTFAYGAPWAFISGVLLATLAGSCLGFLYYN---------RSPARIFMGDT 243 Query: 166 YSLFTRPELCLC 131 SLF L +C Sbjct: 244 GSLFLGGMLGIC 255
>CCD27_HUMAN (Q2M243) Coiled-coil domain-containing protein 27| Length = 656 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/44 (31%), Positives = 27/44 (61%) Frame = +3 Query: 246 RQRLEVVTQRLATSIFQEMDREEMKMVILRQEQTFRQQVHEMHR 377 RQ+L+ +T + + ++ ++ +EM +I + Q RQQV E+ R Sbjct: 475 RQQLQAMTDKFS-NLREDKKHQEMMGLIEKDNQLLRQQVSELER 517
>ASPM_AOTVO (P62283) Abnormal spindle-like microcephaly-associated protein| homolog Length = 3473 Score = 28.5 bits (62), Expect = 9.1 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +3 Query: 174 ERKASLGEAEGVPSLGAEFSGWKPRQRLEVVTQRLATSIFQE 299 ERK+ L + V ++ A F G K RQ+L+ V+Q +I + Sbjct: 2727 ERKSFLAVQKSVRTIQAAFRGMKVRQKLKNVSQEKMAAIVNQ 2768
>OLF1_RAT (P70526) Olfactory receptor 1 (Olfactory receptor 1469) (Olfactory| receptor OR5) (Olfactory receptor HGL-SP1) (Olfactory receptor-like protein I54) Length = 314 Score = 28.5 bits (62), Expect = 9.1 Identities = 19/53 (35%), Positives = 26/53 (49%) Frame = -3 Query: 425 PSYLRLPHQLFLNMVNSVHLMNLLSECLFLPQDNHLHLLSVHLLENASCKSLC 267 P + + + LFL+M + L NL+ L L D+HLH L N S LC Sbjct: 21 PEHQHVFYALFLSMYLTTVLGNLIIIILIL-LDSHLHTPMYLFLSNLSFSDLC 72
>V248_FOWPV (P14364) Hypothetical protein FPV248 (BamHI-ORF6)| Length = 151 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = -3 Query: 452 FRLSVSLVLPSYLRLPHQLFLNMVNSVHLMNLLSECLFLPQDNHL 318 F L V + SY++ +QL +++ LM+ L E + L DN++ Sbjct: 107 FSLKVVKFINSYIQDSYQLEYELIHKKSLMDQLKEIILLNDDNNM 151
>UBR1_SCHPO (O60152) Ubiquitin-protein ligase E3 component N-recognin-1 (EC| 6.-.-.-) (N-end-recognizing protein) Length = 1958 Score = 28.5 bits (62), Expect = 9.1 Identities = 14/40 (35%), Positives = 19/40 (47%) Frame = -3 Query: 335 PQDNHLHLLSVHLLENASCKSLCDYLQSLSWFPAAEFRSQ 216 P NH H LS+ CK+LC+ + + W P E Q Sbjct: 1315 PYRNHPHNLSMKEFLCPLCKALCNTIFPILWRPKEEINFQ 1354
>YDH3_SHV2C (P22577) Hypothetical 9.5 kDa protein in DHFR 3'region (ORF3)| Length = 103 Score = 28.5 bits (62), Expect = 9.1 Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 2/27 (7%) Frame = -1 Query: 466 ISSLGFV--SA*AWFFPAICVSLISCF 392 +SS+G++ + A FF +CV+L+SCF Sbjct: 70 VSSIGYLRFGSLAIFFKTVCVALVSCF 96 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,994,137 Number of Sequences: 219361 Number of extensions: 1178879 Number of successful extensions: 4017 Number of sequences better than 10.0: 39 Number of HSP's better than 10.0 without gapping: 3824 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4007 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
