Clone Information

BLAST Search Result

Clone Name	baet71b12
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog) (SMA...	31	0.71
2	IF2_AGRT5 (Q8UJ51) Translation initiation factor IF-2	30	1.6
3	NLGN2_HUMAN (Q8NFZ4) Neuroligin-2 precursor	30	1.6
4	NLGN2_RAT (Q62888) Neuroligin-2 precursor	30	1.6
5	NGLN2_MOUSE (Q69ZK9) Neuroligin-2 precursor	30	1.6
6	ERR1_MOUSE (O08580) Steroid hormone receptor ERR1 (Estrogen-rela...	30	1.6
7	B1_FHV (P68829) Protein B1	30	2.1
8	B1_BBV (P68828) Protein B1	30	2.1
9	DPYD_CAEEL (Q18164) Probable dihydropyrimidine dehydrogenase [NA...	30	2.1
10	RDRP_FHV (Q66929) RNA-directed RNA polymerase (EC 2.7.7.48) (RdR...	30	2.1
11	RDRP_BBV (Q96631) RNA-directed RNA polymerase (EC 2.7.7.48) (RdR...	30	2.1
12	STS5_SCHPO (O74454) Protein sts5	30	2.1
13	GCP60_RAT (Q7TNY6) Golgi resident protein GCP60 (Acyl-CoA-bindin...	29	2.7
14	JHD3B_HUMAN (O94953) JmjC domain-containing histone demethylatio...	29	2.7
15	ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P...	29	2.7
16	CYSP7_DICDI (Q94504) Cysteine proteinase 7 precursor (EC 3.4.22....	29	2.7
17	CN103_MOUSE (Q80XK6) Protein C14orf103 homolog	29	2.7
18	PRP46_EMENI (Q5BE22) Pre-mRNA-splicing factor prp46 (Pre-mRNA-pr...	29	2.7
19	ST18_HUMAN (O60284) Suppression of tumorigenicity protein 18 (Zi...	29	3.5
20	ENAM_PIG (O97939) Enamelin precursor [Contains: 89 kDa enamelin;...	29	3.5
21	ERR1_HUMAN (P11474) Steroid hormone receptor ERR1 (Estrogen-rela...	29	3.5
22	H1A_XENLA (P06892) Histone H1A	28	4.6
23	HS32_DICDI (P54658) 32 kDa heat shock protein (4-1 protein)	28	4.6
24	ELF2_HUMAN (Q15723) ETS-related transcription factor Elf-2 (E74-...	28	6.0
25	AT2B2_HUMAN (Q01814) Plasma membrane calcium-transporting ATPase...	28	6.0
26	GCP60_HUMAN (Q9H3P7) Golgi resident protein GCP60 (Acyl-CoA-bind...	28	6.0
27	UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (E...	28	6.0
28	NOS3_PIG (Q28969) Nitric-oxide synthase, endothelial (EC 1.14.13...	28	6.0
29	HME2_MOUSE (P09066) Homeobox protein engrailed-2 (Mo-En-2)	28	6.0
30	YGK3_SCHPO (O94322) Hypothetical protein C725.03 in chromosome II	28	6.0
31	YLB8_CAEEL (P46582) Hypothetical protein C34E10.8	28	6.0
32	CYLC2_BOVIN (Q28092) Cylicin-2 (Cylicin II) (Multiple-band polyp...	28	6.0
33	NHR5_CAEEL (Q9NA51) Nuclear hormone receptor family member nhr-5	28	6.0
34	ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P...	28	7.8
35	SPP2_ASPFU (Q4WP02) Pre-mRNA-splicing factor spp2	28	7.8
36	COX17_CANFA (Q6J3Q7) Cytochrome c oxidase copper chaperone	28	7.8
37	TOP2_PICGU (Q01879) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoi...	28	7.8
38	ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline...	28	7.8
39	YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon ...	28	7.8
40	POLN_BFV (P87515) Nonstructural polyprotein (Polyprotein nsP1234...	28	7.8
41	GGT5_HUMAN (P36269) Gamma-glutamyltransferase 5 precursor (EC 2....	28	7.8

>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)|
            (SMART/HDAC1-associated repressor protein)
          Length = 3644

 Score = 31.2 bits (69), Expect = 0.71
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -3

Query: 243  RSSXKAAMMGMEPASTKGMAAAPPTPRSQKEKPKPKLPMAKC 118
            R+S         PA+ +  AA P  P+ +K   KP  P A+C
Sbjct: 2355 RASEAEQTQSESPAAEEATAATPEAPQEEKPSEKPPSPPAEC 2396

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>IF2_AGRT5 (Q8UJ51) Translation initiation factor IF-2|
          Length = 913

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 8/57 (14%)
 Frame = -3

Query: 240 SSXKAAMMGMEPASTKGMAAAPPTPRSQKE--------KPKPKLPMAKCPREGRCSG 94
           +S  AA +  EPAS +  AAA P PR+           +  P  P A  PR  R  G
Sbjct: 189 ASQPAAEVRAEPASERPAAAAAPAPRTDARPQSAAAAPRSAPATPDAAAPRGRRTGG 245

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>NLGN2_HUMAN (Q8NFZ4) Neuroligin-2 precursor|
          Length = 835

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 154 RKAQAEAANGKMPKGGQMLWPSAGRVLPDEWSMPQIWSRKGGASG 20
           R+      +G    GG  L P+AGR LP E  +  +  ++GG  G
Sbjct: 710 RRLSPPGGSGSGVPGGGPLLPAAGRELPPEEELVSLQLKRGGGVG 754

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>NLGN2_RAT (Q62888) Neuroligin-2 precursor|
          Length = 836

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 154 RKAQAEAANGKMPKGGQMLWPSAGRVLPDEWSMPQIWSRKGGASG 20
           R+      +G    GG  L P+AGR LP E  +  +  ++GG  G
Sbjct: 711 RRLSPPGGSGSGVPGGGPLLPTAGRELPPEEELVSLQLKRGGGVG 755

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>NGLN2_MOUSE (Q69ZK9) Neuroligin-2 precursor|
          Length = 836

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -2

Query: 154 RKAQAEAANGKMPKGGQMLWPSAGRVLPDEWSMPQIWSRKGGASG 20
           R+      +G    GG  L P+AGR LP E  +  +  ++GG  G
Sbjct: 711 RRLSPPGGSGSGVPGGGPLLPTAGRELPPEEELVSLQLKRGGGVG 755

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>ERR1_MOUSE (O08580) Steroid hormone receptor ERR1 (Estrogen-related receptor,|
           alpha) (ERR-alpha) (Estrogen receptor-like 1) (Fragment)
          Length = 462

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -3

Query: 240 SSXKAAMMGMEPASTKGMAAAPPTPRSQKE-KPKPKLPMAKCPREGRC 100
           S+  + ++G+EP   K   A+P +P+   E + +P + +A  P   RC
Sbjct: 39  STMSSQVVGIEPLYIKAEPASPDSPKGSSETETEPPVTLASGPAPARC 86

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>B1_FHV (P68829) Protein B1|
          Length = 102

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
 Frame = -2

Query: 211 GTSKHKGDGSGTTH-TSLP---ERKAQAEAANGKMPKGGQMLWPSAGRVLPDEWSMPQIW 44
           GTS+   +G G++H   LP   E++AQ      ++PK G+    S G +   E     I 
Sbjct: 13  GTSRPHSNGGGSSHGNELPRRTEQRAQGPRQPARLPKQGKTNGKSDGNITAGETQRGGIP 72

Query: 43  SRKGGASG 20
             KG   G
Sbjct: 73  RGKGPRGG 80

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>B1_BBV (P68828) Protein B1|
          Length = 102

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
 Frame = -2

Query: 211 GTSKHKGDGSGTTH-TSLP---ERKAQAEAANGKMPKGGQMLWPSAGRVLPDEWSMPQIW 44
           GTS+   +G G++H   LP   E++AQ      ++PK G+    S G +   E     I 
Sbjct: 13  GTSRPHSNGGGSSHGNELPRRTEQRAQGPRQPARLPKQGKTNGKSDGNITAGETQRGGIP 72

Query: 43  SRKGGASG 20
             KG   G
Sbjct: 73  RGKGPRGG 80

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>DPYD_CAEEL (Q18164) Probable dihydropyrimidine dehydrogenase [NADP+] (EC|
           1.3.1.2) (DPD) (DHPDHase) (Dihydrouracil dehydrogenase)
           (Dihydrothymine dehydrogenase)
          Length = 1059

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 16/33 (48%), Positives = 17/33 (51%)
 Frame = -2

Query: 232 KGCNDGDGTSKHKGDGSGTTHTSLPERKAQAEA 134
           KGC    G SK K D     HT+L ER A  EA
Sbjct: 59  KGCGSTCGESKLKNDFRDIKHTTLSERGALKEA 91

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>RDRP_FHV (Q66929) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA|
            replicase) (Protein A)
          Length = 998

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
 Frame = -2

Query: 211  GTSKHKGDGSGTTH-TSLP---ERKAQAEAANGKMPKGGQMLWPSAGRVLPDEWSMPQIW 44
            GTS+   +G G++H   LP   E++AQ      ++PK G+    S G +   E     I 
Sbjct: 909  GTSRPHSNGGGSSHGNELPRRTEQRAQGPRQPARLPKQGKTNGKSDGNITAGETQRGGIP 968

Query: 43   SRKGGASG 20
              KG   G
Sbjct: 969  RGKGPRGG 976

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>RDRP_BBV (Q96631) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA|
            replicase) (Protein A)
          Length = 998

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
 Frame = -2

Query: 211  GTSKHKGDGSGTTH-TSLP---ERKAQAEAANGKMPKGGQMLWPSAGRVLPDEWSMPQIW 44
            GTS+   +G G++H   LP   E++AQ      ++PK G+    S G +   E     I 
Sbjct: 909  GTSRPHSNGGGSSHGNELPRRTEQRAQGPRQPARLPKQGKTNGKSDGNITAGETQRGGIP 968

Query: 43   SRKGGASG 20
              KG   G
Sbjct: 969  RGKGPRGG 976

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>STS5_SCHPO (O74454) Protein sts5|
          Length = 1066

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
 Frame = +2

Query: 2   SHTQTHAGGSSFPAPDLWH*PLIRKDSPSRRPE-----HLPSLGHFAIGSFGLGFS 154
           +++ THA   SFP   + H      ++ + RPE     H  S G  ++GS G GFS
Sbjct: 226 TNSPTHAANPSFPGTIVTH------NTSNFRPEGGGHRHRRSTGSLSVGSSGSGFS 275

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>GCP60_RAT (Q7TNY6) Golgi resident protein GCP60 (Acyl-CoA-binding|
           domain-containing protein 3) (Golgi phosphoprotein 1)
           (GOLPH1) (Golgi complex-associated protein 1) (GOCAP1)
           (DMT1-associated protein) (DAP)
          Length = 525

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = -2

Query: 190 DGSGTTHTSLPERKAQAEAANGKMPKGGQMLWPSAGRVLPDEWSMPQI 47
           +G   THT  PE+  + EAA   +  G +   P      P  W+ PQI
Sbjct: 331 NGQAKTHTENPEKVLEPEAAEEALENGPKDSLPVI--AAPSMWTRPQI 376

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>JHD3B_HUMAN (O94953) JmjC domain-containing histone demethylation protein 3B|
           (EC 1.14.11.-) (Jumonji domain-containing protein 2B)
          Length = 1096

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 21/48 (43%), Positives = 24/48 (50%)
 Frame = -3

Query: 165 RSQKEKPKPKLPMAKCPREGRCSGRLLGESFLMSGQCHKSGAGKEEPP 22
           RSQ +KPKP+ P  K P EG     LL E    +G   K  AG E  P
Sbjct: 377 RSQPKKPKPEDP--KFPGEGTAGAALLEE----AGGSVKEEAGPEVDP 418

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>ICP0_BHV1J (P29128) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 22/74 (29%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
 Frame = -3

Query: 219 MGMEPASTKGMAAAPPTPRSQKEKPKPKLPMA----------KCPREGRCSGRLLGESFL 70
           +   P       +APP+ RS+  +  P+LP A           C  E R  GR  G   +
Sbjct: 369 LARRPCGRAAAVSAPPSSRSRGGRRDPRLPAAPRAAPAAQARACSPEPREEGRGAGLG-V 427

Query: 69  MSGQCHKSGAGKEE 28
            +G+    GAG EE
Sbjct: 428 AAGETAGWGAGSEE 441

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>CYSP7_DICDI (Q94504) Cysteine proteinase 7 precursor (EC 3.4.22.-) (Proteinase|
           1)
          Length = 460

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 17/73 (23%), Positives = 27/73 (36%)
 Frame = -2

Query: 229 GCNDGDGTSKHKGDGSGTTHTSLPERKAQAEAANGKMPKGGQMLWPSAGRVLPDEWSMPQ 50
           G   G G+    G GSG+   S     + + + +         ++P+AG    D W +  
Sbjct: 368 GSGSGSGSGSGSGSGSGSVSGSASGSASGSASGSSSGSNSNGGVYPTAG----DYWIVKN 423

Query: 49  IWSRKGGASGVCL 11
            W    G  G  L
Sbjct: 424 SWGTSWGMDGYIL 436

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>CN103_MOUSE (Q80XK6) Protein C14orf103 homolog|
          Length = 908

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 22/68 (32%), Positives = 25/68 (36%), Gaps = 3/68 (4%)
 Frame = -3

Query: 195 KGMAAAPPTPRSQKEKPKPKLPMAKCPREGR---CSGRLLGESFLMSGQCHKSGAGKEEP 25
           K  A APPT  ++        P     R GR   C G+     FLM  Q  K     E  
Sbjct: 394 KDFATAPPTSPAKSYISPHSSPSQTPTRHGRHTVCGGKGRNHDFLMEIQLSKVKFQHEVY 453

Query: 24  PACVCVCE 1
           P C   CE
Sbjct: 454 PPCKPECE 461

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>PRP46_EMENI (Q5BE22) Pre-mRNA-splicing factor prp46 (Pre-mRNA-processing|
           protein 46)
          Length = 452

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
 Frame = -2

Query: 208 TSKHKGDGSGT---THTSLPERKAQAEAANGKMPKGGQMLWPSAGRVLPDEWSMP 53
           +S+ +G GSG      T+L  R  +A  A G       +  PSA R  P EW  P
Sbjct: 78  SSRSEGSGSGDKSGASTALVRRGGRASGAAGDDKPTSLIQRPSATRQQPPEWHAP 132

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>ST18_HUMAN (O60284) Suppression of tumorigenicity protein 18 (Zinc finger|
           protein 387)
          Length = 1047

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 207 PASTKGMAAAPPTPRSQKEKPKPKLPMAKCPREGRCSGR 91
           P + KG     PT + +KE P+ K P+  C  +G  SG+
Sbjct: 793 PRARKGGVKMTPT-KEEKEDPELKCPVIGCDGQGHISGK 830

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>ENAM_PIG (O97939) Enamelin precursor [Contains: 89 kDa enamelin; 142 kDa|
           enamelin; 155 kDa enamelin; 56 kDa enamelin; 32 kDa
           enamelin; 25 kDa enamelin; 34 kDa enamelin]
          Length = 1142

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = -3

Query: 210 EPASTKGMAAAPPTPRSQK-EKPKPKLPMAKCP 115
           +P+++K  +   P P SQK  +P+PK P  K P
Sbjct: 107 KPSASKQQSKTDPAPESQKPNQPQPKTPTPKQP 139

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>ERR1_HUMAN (P11474) Steroid hormone receptor ERR1 (Estrogen-related receptor,|
           alpha) (ERR-alpha) (Estrogen receptor-like 1)
          Length = 519

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -3

Query: 240 SSXKAAMMGMEPASTKGMAAAPPTPRSQKE-KPKPKLPMAKCPREGRC 100
           S+  + ++G+EP   K   A+P +P+   E + +P + +A  P   RC
Sbjct: 96  SAMSSQVVGIEPLYIKAEPASPDSPKGSSETETEPPVALAPGPAPTRC 143

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>H1A_XENLA (P06892) Histone H1A|
          Length = 209

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
 Frame = -3

Query: 270 SINMGKKRCRSSXKAAMMGMEPAST---KGMAAAPPTPRSQKEKPKPKLPMAKCPRE 109
           S  + KK+ +S  KAA     P +    K  AAA  T +S K KPK     AK P++
Sbjct: 107 SFKLNKKQLQSKDKAAAKKKAPLAAEAKKPAAAAKKTAKSPK-KPKKVSAAAKSPKK 162

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>HS32_DICDI (P54658) 32 kDa heat shock protein (4-1 protein)|
          Length = 281

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 231 KAAMMGMEPASTKGMAAAPPTPRSQKEKPKPKLP 130
           KAA    E A+ K  AA+P  P++ + K  PK P
Sbjct: 219 KAAAQQPEKANNKPAAASPAKPQNNQSKNAPKQP 252

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>ELF2_HUMAN (Q15723) ETS-related transcription factor Elf-2 (E74-like factor 2)|
           (New ETS-related factor)
          Length = 593

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = -3

Query: 210 EPASTKGMAAAPPTPRSQKEKPKPKLPMAKCPREGRCSGRLLGESFL 70
           EP   K +   P T +S      P+L + K PREG+ +   L E  L
Sbjct: 169 EPMKKKKVGRKPKTQQSPISNGSPELGIKKKPREGKGNTTYLWEFLL 215

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>AT2B2_HUMAN (Q01814) Plasma membrane calcium-transporting ATPase 2 (EC 3.6.3.8)|
           (PMCA2) (Plasma membrane calcium pump isoform 2) (Plasma
           membrane calcium ATPase isoform 2)
          Length = 1243

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = -2

Query: 259 GKEEM*E*XKGCNDGDGTSKHKGDGSGTTHTSLPERKAQAEAANGKMPKG 110
           G+EE  +  KG   GDG      DG+  ++ +     A A   NGKM  G
Sbjct: 293 GEEEEKKDKKGVKKGDGLQLPAADGAAASNAA---DSANASLVNGKMQDG 339

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>GCP60_HUMAN (Q9H3P7) Golgi resident protein GCP60 (Acyl-CoA-binding|
           domain-containing protein 3) (Golgi phosphoprotein 1)
           (GOLPH1) (Golgi complex-associated protein 1) (GOCAP1)
           (PBR- and PKA-associated protein 7) (Peripherial
           benzodiazepine receptor-asso
          Length = 527

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = -2

Query: 190 DGSGTTHTSLPERKAQAEAANGKMPKGGQMLWPSAGRVLPDEWSMPQI 47
           +G   THT   E++ + EAA   +  G +   P      P  W+ PQI
Sbjct: 334 NGQAKTHTDSSEKELEPEAAEEALENGPKESLPVI--AAPSMWTRPQI 379

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>UBP51_HUMAN (Q70EK9) Ubiquitin carboxyl-terminal hydrolase 51 (EC 3.1.2.15)|
           (Ubiquitin thioesterase 51)
           (Ubiquitin-specific-processing protease 51)
           (Deubiquitinating enzyme 51)
          Length = 711

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 20/63 (31%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
 Frame = -3

Query: 249 RCRSSXKAAMMGMEPA----------STKGMAAAPPTPRSQKEKPKPKLPMAKCPREGRC 100
           RC SS        +P           S  G++A PP P      P P  P A  PR  R 
Sbjct: 90  RCHSSSSPVCPRRKPRPRPQPRARSRSQPGLSAPPPPPARPPPPPPPPPPPAPRPRAWRG 149

Query: 99  SGR 91
           S R
Sbjct: 150 SRR 152

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>NOS3_PIG (Q28969) Nitric-oxide synthase, endothelial (EC 1.14.13.39)|
           (EC-NOS) (NOS type III) (NOSIII) (Endothelial NOS)
           (eNOS) (Constitutive NOS) (cNOS)
          Length = 1204

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 13/34 (38%), Positives = 15/34 (44%)
 Frame = -3

Query: 207 PASTKGMAAAPPTPRSQKEKPKPKLPMAKCPREG 106
           PA     A AP TP + +  P P  P    P EG
Sbjct: 33  PAPEPSRAPAPATPHAPEHSPAPNSPTLTRPPEG 66

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>HME2_MOUSE (P09066) Homeobox protein engrailed-2 (Mo-En-2)|
          Length = 324

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/42 (38%), Positives = 19/42 (45%)
 Frame = -2

Query: 214 DGTSKHKGDGSGTTHTSLPERKAQAEAANGKMPKGGQMLWPS 89
           DG  K +G G G    S     +QA A  G  P    MLWP+
Sbjct: 169 DGVLKARGLGGGDLSVSSDSDSSQASATLGAQP----MLWPA 206

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>YGK3_SCHPO (O94322) Hypothetical protein C725.03 in chromosome II|
          Length = 257

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -1

Query: 218 WGWNQQAQRGWQRHHPHLAPRKKSPSRSCQWQ 123
           W W ++ +R W+ H P L     +P    ++Q
Sbjct: 154 WSWEEERRRIWELHSPELRASFSTPPSYSKYQ 185

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>YLB8_CAEEL (P46582) Hypothetical protein C34E10.8|
          Length = 1024

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)
 Frame = -3

Query: 240  SSXKAAMMGMEPASTKGMAAAPPTPRSQKEKPK---PKLPMAKCPR 112
            SS  A  +  EP + K    + P P  +KEK K   PK P +   R
Sbjct: 877  SSSSAETVSGEPPAKKSSDVSAPVPSPEKEKEKIDRPKTPKSSTKR 922

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>CYLC2_BOVIN (Q28092) Cylicin-2 (Cylicin II) (Multiple-band polypeptide II)|
          Length = 488

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = -3

Query: 177 PPTPRSQKEKPKPKLPMAKCPREGRCSGRLLGESFLMSGQCHKSGAGKEEPP 22
           PP+    K+  KP  P  K  +E +       ES +   +  K    KEE P
Sbjct: 104 PPSQEDAKQAAKPSSPKVKKSKEDKDKSDSEAESIVSKEKPRKLSKAKEEKP 155

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>NHR5_CAEEL (Q9NA51) Nuclear hormone receptor family member nhr-5|
          Length = 703

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
 Frame = -3

Query: 255 KKRCRSSX--KAAMMGMEPASTKGMAAAPPTPRSQKEKPKPKLPMAKCPREGR 103
           K +CRS    K    GM PA  +    APP PR      KP   +A C +  R
Sbjct: 92  KTQCRSCRFNKCLREGMNPAYVRPNRDAPPKPR------KPTTTVATCDQTDR 138

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>ICP0_BHV1K (P29836) Trans-acting transcriptional protein ICP0 (P135 protein)|
           (IER 2.9/ER2.6)
          Length = 676

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 10/74 (13%)
 Frame = -3

Query: 219 MGMEPASTKGMAAAPPTPRSQKEKPKPKLPMA----------KCPREGRCSGRLLGESFL 70
           +   P       +APP+ RS+  +  P+LP A           C  E R  GR  G   +
Sbjct: 369 LARRPCGRAAAVSAPPSSRSRGGRRDPRLPAAPRAAPAAQARACSPEPREEGRGAGLG-V 427

Query: 69  MSGQCHKSGAGKEE 28
            +G+    G G EE
Sbjct: 428 AAGETAGWGVGSEE 441

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>SPP2_ASPFU (Q4WP02) Pre-mRNA-splicing factor spp2|
          Length = 541

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 24  EAPPFLLQICGIDHSSGRTLPADGQSI 104
           EAPP    + G D  +G  L ADG+++
Sbjct: 66  EAPPAFEDVAGFDTHTGTVLSADGRAV 92

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>COX17_CANFA (Q6J3Q7) Cytochrome c oxidase copper chaperone|
          Length = 62

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 192 GMAAAPPTPRSQKEKPKPKLPMAKCP 115
           G+AAA P P   +EK KP  P   CP
Sbjct: 2   GLAAASPAPSDSQEK-KPLKPCCACP 26

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>TOP2_PICGU (Q01879) DNA topoisomerase 2 (EC 5.99.1.3) (DNA topoisomerase II)|
           (Fragment)
          Length = 389

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = -3

Query: 210 EPASTKGMAAAPPTPRSQKEKPKPKL 133
           EP+  K ++AAPP  ++ K KPK ++
Sbjct: 259 EPSVAKTVSAAPPKRKTPKSKPKKEV 284

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>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein|
           1) (NDPP-1)
          Length = 802

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = -3

Query: 213 MEPASTKGMAAAPPTPRSQKEKPKPKLPMAKCP 115
           + P  T G AA PP P      P P LP    P
Sbjct: 431 VSPPPTSGPAAPPPPPPPPPPPPPPPLPPPPLP 463

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>YT35_STRFR (P20186) Hypothetical 35.5 kDa protein in transposon Tn4556|
          Length = 348

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 22/75 (29%), Positives = 28/75 (37%)
 Frame = -3

Query: 243 RSSXKAAMMGMEPASTKGMAAAPPTPRSQKEKPKPKLPMAKCPREGRCSGRLLGESFLMS 64
           R++  A      PA     AA PP PR     P+P    A+ P    CS      S    
Sbjct: 261 RTTPSAPRPSSRPARPPIPAARPP-PRRTPGTPRPAAARARAP--AGCSPARRTPSAPTD 317

Query: 63  GQCHKSGAGKEEPPA 19
            +C  +  G   PPA
Sbjct: 318 RRCRAARRGSPRPPA 332

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>POLN_BFV (P87515) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC 3
          Length = 2410

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = -1

Query: 284  PNSFKASTWERRDVGVVXRLQ*WGWNQQAQRGWQRHHPHLAPRKKS 147
            P ++    W+ R  G +     +G++QQA     R HP+L  R+KS
Sbjct: 1074 PMTYTKDHWDNRVGGKM-----YGFSQQAYDQLARRHPYLRGREKS 1114

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>GGT5_HUMAN (P36269) Gamma-glutamyltransferase 5 precursor (EC 2.3.2.2)|
           (Gamma-glutamyltranspeptidase 5)
           (Gamma-glutamyltransferase-like activity 1) (GGT-rel)
           [Contains: Gamma-glutamyltransferase 5 heavy chain;
           Gamma-glutamyltransferase 5 light chain]
          Length = 586

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 16/76 (21%)
 Frame = -2

Query: 193 GDGSGTTHTSLPERKAQAEAANGKM--PKGGQMLWPSAGRVLPDE---------WS---- 59
           G G+GT+H S+      A AA   +  P G  +  P  G +L +E         W     
Sbjct: 383 GHGTGTSHVSVLGEDGSAVAATSTINTPFGAMVYSPRTGIILNNELLDLCERCPWGSGTT 442

Query: 58  -MPQIWSRKGGASGVC 14
             P    R GGA G C
Sbjct: 443 PSPVSGDRVGGAPGRC 458


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,625,077
Number of Sequences: 219361
Number of extensions: 1059191
Number of successful extensions: 4744
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 4402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4728
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result