ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet71b12
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
2dbj|AP004235.4| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
3dbj|AP003960.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
4emb|AL590627.25| Human DNA sequence from clone RP13-467E5 on chr... 44 0.24
5gb|AC120555.9| Mus musculus chromosome 12, clone RP24-311D18, co... 42 0.95
6gb|AC123620.14| Mus musculus chromosome 12, clone RP23-53J21, co... 42 0.95
7ref|XM_468382.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.8
8ref|XM_507042.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 3.8
9ref|XM_874397.1| PREDICTED: Bos taurus similar to splicing facto... 40 3.8
10ref|XM_874322.1| PREDICTED: Bos taurus similar to splicing facto... 40 3.8
11ref|XM_874236.1| PREDICTED: Bos taurus similar to splicing facto... 40 3.8
12ref|XM_874148.1| PREDICTED: Bos taurus similar to splicing facto... 40 3.8
13ref|XM_873967.1| PREDICTED: Bos taurus similar to splicing facto... 40 3.8
14ref|XM_873871.1| PREDICTED: Bos taurus similar to splicing facto... 40 3.8
15ref|XM_873776.1| PREDICTED: Bos taurus similar to splicing facto... 40 3.8
16ref|XM_864599.1| PREDICTED: Bos taurus similar to splicing facto... 40 3.8
17ref|XM_323119.1| Neurospora crassa OR74A hypothetical protein (N... 40 3.8
18ref|XM_956115.1| Neurospora crassa OR74A hypothetical protein (N... 40 3.8
19gb|AC125360.4| Mus musculus BAC clone RP23-58E21 from 12, comple... 40 3.8
20gb|AC108436.5| Mus musculus chromosome 8, clone RP23-230G11, com... 40 3.8
21emb|AL158077.15| Human DNA sequence from clone RP11-471J7 on chr... 40 3.8
22emb|AL109827.8|HSJ309K20 Human DNA sequence from clone RP1-309K2... 40 3.8
23gb|AC162858.6| Mus musculus chromosome 8, clone RP23-117O14, com... 40 3.8
24emb|BX842617.1| Neurospora crassa DNA linkage group V cosmid clo... 40 3.8
25emb|BX571660.1| Wolinella succinogenes, complete genome; segment... 40 3.8
26emb|AL451018.1|NC99H12 Neurospora crassa DNA linkage group V Cos... 40 3.8
27gb|AC161626.6| Pan troglodytes BAC clone CH251-114C24 from chrom... 40 3.8
28ref|NM_169206.1| Drosophila melanogaster grain CG9656-RA (grn), ... 40 3.8
29gb|AC090877.4| Homo sapiens chromosome 15, clone RP11-758N13, co... 40 3.8
30gb|AY071369.1| Drosophila melanogaster RE40104 full length cDNA 40 3.8
31gb|AC010767.7| Homo sapiens chromosome 17, clone RP11-188K10, co... 40 3.8
32gb|AC015943.7| Homo sapiens chromosome 17, clone RP11-581B19, co... 40 3.8
33dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
34gb|AC008094.5|AC008094 Drosophila melanogaster, chromosome 3R, r... 40 3.8
35dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
36dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.8
37gb|AF092497.1|AF092497 Yarrowia lipolytica squalene synthase (SQ... 40 3.8
38dbj|AK104489.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.8
39dbj|AK067252.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.8
40gb|AC078889.20| Homo sapiens 12 BAC RP11-335I12 (Roswell Park Ca... 40 3.8
41gb|AE003677.3| Drosophila melanogaster chromosome 3R, section 15... 40 3.8
42dbj|AP003973.3| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 3.8
43gb|AC160565.2| Pan troglodytes BAC clone CH251-539H3 from chromo... 40 3.8
44emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 3.8
45dbj|D50542.1|DROGATA Drosophila melanogaster mRNA for GATA trans... 40 3.8

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                         
Query: 208      ttccatccccatcattgcagccttt 232
                |||||||||||||||||||||||||
Sbjct: 21599945 ttccatccccatcattgcagccttt 21599969



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>dbj|AP004235.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0006G05
          Length = 56865

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 208   ttccatccccatcattgcagccttt 232
             |||||||||||||||||||||||||
Sbjct: 46319 ttccatccccatcattgcagccttt 46343



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>dbj|AP003960.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1612_A04
          Length = 124833

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                      
Query: 208   ttccatccccatcattgcagccttt 232
             |||||||||||||||||||||||||
Sbjct: 30401 ttccatccccatcattgcagccttt 30425



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>emb|AL590627.25| Human DNA sequence from clone RP13-467E5 on chromosome 9 Contains a
             pseudogene similar to part of SET translocation (myeloid
             leukemia-associated) (SET), the 5' end of the gene for
             euchromatic histone methyltransferase 1 (FLJ12879,
             KIAA1876) (Eu-HMTase1) and two CpG islands, complete
             sequence
          Length = 166141

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 53    tggcattgaccactcatcagga 74
             ||||||||||||||||||||||
Sbjct: 47238 tggcattgaccactcatcagga 47259



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>gb|AC120555.9| Mus musculus chromosome 12, clone RP24-311D18, complete sequence
          Length = 164820

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 185   gccatcccctttgtgcttgct 205
             |||||||||||||||||||||
Sbjct: 10060 gccatcccctttgtgcttgct 10080



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>gb|AC123620.14| Mus musculus chromosome 12, clone RP23-53J21, complete sequence
          Length = 182783

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 185    gccatcccctttgtgcttgct 205
              |||||||||||||||||||||
Sbjct: 143414 gccatcccctttgtgcttgct 143434



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>ref|XM_468382.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1327

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 ggcagcttcggcttgggctt 150
           ||||||||||||||||||||
Sbjct: 727 ggcagcttcggcttgggctt 708



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>ref|XM_507042.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1293_E04.28
           mRNA
          Length = 1332

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 ggcagcttcggcttgggctt 150
           ||||||||||||||||||||
Sbjct: 728 ggcagcttcggcttgggctt 709



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>ref|XM_874397.1| PREDICTED: Bos taurus similar to splicing factor,
           arginine/serine-rich 12, transcript variant 9
           (LOC507801), mRNA
          Length = 2478

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 ggcagcttcggcttgggctt 150
           ||||||||||||||||||||
Sbjct: 92  ggcagcttcggcttgggctt 111



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>ref|XM_874322.1| PREDICTED: Bos taurus similar to splicing factor,
           arginine/serine-rich 12, transcript variant 8
           (LOC507801), mRNA
          Length = 2467

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 ggcagcttcggcttgggctt 150
           ||||||||||||||||||||
Sbjct: 57  ggcagcttcggcttgggctt 76



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>ref|XM_874236.1| PREDICTED: Bos taurus similar to splicing factor,
           arginine/serine-rich 12, transcript variant 7
           (LOC507801), mRNA
          Length = 1207

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 ggcagcttcggcttgggctt 150
           ||||||||||||||||||||
Sbjct: 92  ggcagcttcggcttgggctt 111



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>ref|XM_874148.1| PREDICTED: Bos taurus similar to splicing factor,
           arginine/serine-rich 12, transcript variant 6
           (LOC507801), mRNA
          Length = 2449

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 ggcagcttcggcttgggctt 150
           ||||||||||||||||||||
Sbjct: 57  ggcagcttcggcttgggctt 76



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>ref|XM_873967.1| PREDICTED: Bos taurus similar to splicing factor,
           arginine/serine-rich 12, transcript variant 5
           (LOC507801), mRNA
          Length = 860

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 ggcagcttcggcttgggctt 150
           ||||||||||||||||||||
Sbjct: 57  ggcagcttcggcttgggctt 76



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>ref|XM_873871.1| PREDICTED: Bos taurus similar to splicing factor,
           arginine/serine-rich 12, transcript variant 4
           (LOC507801), mRNA
          Length = 640

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 ggcagcttcggcttgggctt 150
           ||||||||||||||||||||
Sbjct: 125 ggcagcttcggcttgggctt 144



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>ref|XM_873776.1| PREDICTED: Bos taurus similar to splicing factor,
           arginine/serine-rich 12, transcript variant 3
           (LOC507801), mRNA
          Length = 562

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 ggcagcttcggcttgggctt 150
           ||||||||||||||||||||
Sbjct: 59  ggcagcttcggcttgggctt 78



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>ref|XM_864599.1| PREDICTED: Bos taurus similar to splicing factor,
           arginine/serine-rich 12, transcript variant 2
           (LOC507801), mRNA
          Length = 4002

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 131 ggcagcttcggcttgggctt 150
           ||||||||||||||||||||
Sbjct: 92  ggcagcttcggcttgggctt 111



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>ref|XM_323119.1| Neurospora crassa OR74A hypothetical protein (NCU03819.1) partial
            mRNA
          Length = 6255

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 136  cttcggcttgggcttttctt 155
            ||||||||||||||||||||
Sbjct: 5457 cttcggcttgggcttttctt 5438



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>ref|XM_956115.1| Neurospora crassa OR74A hypothetical protein (NCU03819.1) partial
            mRNA
          Length = 6255

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 136  cttcggcttgggcttttctt 155
            ||||||||||||||||||||
Sbjct: 5457 cttcggcttgggcttttctt 5438



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>gb|AC125360.4| Mus musculus BAC clone RP23-58E21 from 12, complete sequence
          Length = 170040

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 29     tcctcctttcctgctccagatttg 52
              |||| |||||||||||||||||||
Sbjct: 134679 tccttctttcctgctccagatttg 134702



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>gb|AC108436.5| Mus musculus chromosome 8, clone RP23-230G11, complete sequence
          Length = 185534

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 27     gctcctcctttcctgctcca 46
              ||||||||||||||||||||
Sbjct: 135269 gctcctcctttcctgctcca 135250



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>emb|AL158077.15| Human DNA sequence from clone RP11-471J7 on chromosome 9 Contains the
            5' end of the SLC24A2 gene for solute carrier family 24
            (sodium/potassium/calcium exchanger), member 2 (NCKX2)
            and a CpG island, complete sequence
          Length = 159900

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 29   tcctcctttcctgctccaga 48
            ||||||||||||||||||||
Sbjct: 5167 tcctcctttcctgctccaga 5148



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>emb|AL109827.8|HSJ309K20 Human DNA sequence from clone RP1-309K20 on chromosome 20 Contains
            the 5' end of the FER1L4 gene for fer-1-like 4 (C.
            elegans), the C20orf124 gene for chromosome 20 open
            reading frame 124, the SPAG4 gene for sperm associated
            antigen 4, the CPNE1 gene for copine I, the RBM12 gene
            for RNA binding motif protein 12, the 3' end of the NIFS
            gene for nitrogen fixation 1 (S. cerevisiae) and four CpG
            islands, complete sequence
          Length = 98599

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 28   ctcctcctttcctgctccag 47
            ||||||||||||||||||||
Sbjct: 4207 ctcctcctttcctgctccag 4188



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>gb|AC162858.6| Mus musculus chromosome 8, clone RP23-117O14, complete sequence
          Length = 167086

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 27   gctcctcctttcctgctcca 46
            ||||||||||||||||||||
Sbjct: 8033 gctcctcctttcctgctcca 8052



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>emb|BX842617.1| Neurospora crassa DNA linkage group V cosmid clone 82C3
          Length = 40661

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 136  cttcggcttgggcttttctt 155
            ||||||||||||||||||||
Sbjct: 1414 cttcggcttgggcttttctt 1395



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>emb|BX571660.1| Wolinella succinogenes, complete genome; segment 4/7
          Length = 349926

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 134    agcttcggcttgggcttttc 153
              ||||||||||||||||||||
Sbjct: 180575 agcttcggcttgggcttttc 180556



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>emb|AL451018.1|NC99H12 Neurospora crassa DNA linkage group V Cosmid contig 99H12
          Length = 85165

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 136   cttcggcttgggcttttctt 155
             ||||||||||||||||||||
Sbjct: 71660 cttcggcttgggcttttctt 71641



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>gb|AC161626.6| Pan troglodytes BAC clone CH251-114C24 from chromosome unknown,
             complete sequence
          Length = 167136

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    ctcctcctttcctgctccag 47
             ||||||||||||||||||||
Sbjct: 57359 ctcctcctttcctgctccag 57340



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>ref|NM_169206.1| Drosophila melanogaster grain CG9656-RA (grn), mRNA
          Length = 3467

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  gtgtgggtggtgccgctgcc 187
            ||||||||||||||||||||
Sbjct: 1164 gtgtgggtggtgccgctgcc 1145



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>gb|AC090877.4| Homo sapiens chromosome 15, clone RP11-758N13, complete sequence
          Length = 181460

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   ttgggcttttctttctggga 162
             ||||||||||||||||||||
Sbjct: 71668 ttgggcttttctttctggga 71649



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>gb|AY071369.1| Drosophila melanogaster RE40104 full length cDNA
          Length = 3465

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  gtgtgggtggtgccgctgcc 187
            ||||||||||||||||||||
Sbjct: 1164 gtgtgggtggtgccgctgcc 1145



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>gb|AC010767.7| Homo sapiens chromosome 17, clone RP11-188K10, complete sequence
          Length = 184952

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    tgggcttttctttctgggag 163
              ||||||||||||||||||||
Sbjct: 165012 tgggcttttctttctgggag 164993



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>gb|AC015943.7| Homo sapiens chromosome 17, clone RP11-581B19, complete sequence
          Length = 161958

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 144   tgggcttttctttctgggag 163
             ||||||||||||||||||||
Sbjct: 97927 tgggcttttctttctgggag 97946



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 131      ggcagcttcggcttgggctt 150
                ||||||||||||||||||||
Sbjct: 34942307 ggcagcttcggcttgggctt 34942288



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>gb|AC008094.5|AC008094 Drosophila melanogaster, chromosome 3R, region 84F-84F, BAC clone
             BACR45A07, complete sequence
          Length = 170498

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   gtgtgggtggtgccgctgcc 187
             ||||||||||||||||||||
Sbjct: 46222 gtgtgggtggtgccgctgcc 46241



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>dbj|AP005111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0643F09
          Length = 161001

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 131  ggcagcttcggcttgggctt 150
            ||||||||||||||||||||
Sbjct: 2648 ggcagcttcggcttgggctt 2629



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>dbj|AP004120.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1293_E04
          Length = 118192

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 131    ggcagcttcggcttgggctt 150
              ||||||||||||||||||||
Sbjct: 101804 ggcagcttcggcttgggctt 101785



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>gb|AF092497.1|AF092497 Yarrowia lipolytica squalene synthase (SQS) gene, complete cds
          Length = 2293

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   tcatcaggaaggactctccc 85
            ||||||||||||||||||||
Sbjct: 1862 tcatcaggaaggactctccc 1881



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>dbj|AK104489.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-B08, full
           insert sequence
          Length = 1328

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 ggcagcttcggcttgggctt 150
           ||||||||||||||||||||
Sbjct: 727 ggcagcttcggcttgggctt 708



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>dbj|AK067252.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098L06, full
           insert sequence
          Length = 1332

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 131 ggcagcttcggcttgggctt 150
           ||||||||||||||||||||
Sbjct: 728 ggcagcttcggcttgggctt 709



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>gb|AC078889.20| Homo sapiens 12 BAC RP11-335I12 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163992

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 43     tccagatttgtggcattgaccact 66
              |||||||||||| |||||||||||
Sbjct: 110623 tccagatttgtgtcattgaccact 110600



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>gb|AE003677.3| Drosophila melanogaster chromosome 3R, section 15 of 118 of the complete
              sequence
          Length = 228314

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 168    gtgtgggtggtgccgctgcc 187
              ||||||||||||||||||||
Sbjct: 196480 gtgtgggtggtgccgctgcc 196499



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>dbj|AP003973.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-89C3, complete
              sequence
          Length = 189099

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 192    cctttgtgcttgctggttcc 211
              ||||||||||||||||||||
Sbjct: 138103 cctttgtgcttgctggttcc 138084



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>gb|AC160565.2| Pan troglodytes BAC clone CH251-539H3 from chromosome unknown, complete
              sequence
          Length = 166497

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 28     ctcctcctttcctgctccag 47
              ||||||||||||||||||||
Sbjct: 158170 ctcctcctttcctgctccag 158151



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>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 66      tcatcaggaaggactctccc 85
               ||||||||||||||||||||
Sbjct: 1016169 tcatcaggaaggactctccc 1016150



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>dbj|D50542.1|DROGATA Drosophila melanogaster mRNA for GATA transcription factor,
           complete cds
          Length = 3112

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 168 gtgtgggtggtgccgctgcc 187
           ||||||||||||||||||||
Sbjct: 969 gtgtgggtggtgccgctgcc 950


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,819,646
Number of Sequences: 3902068
Number of extensions: 2819646
Number of successful extensions: 52816
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52716
Number of HSP's gapped (non-prelim): 100
length of query: 287
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 265
effective length of database: 17,147,199,772
effective search space: 4544007939580
effective search space used: 4544007939580
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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