ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet71b10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ADO_RAT (Q9Z0U5) Aldehyde oxidase (EC 1.2.3.1) 29 3.2
2AT5G1_RAT (Q06645) ATP synthase lipid-binding protein, mitochond... 28 4.2
3CEFE_STRCL (P18548) Deacetoxycephalosporin C synthetase (EC 1.14... 28 5.5
4AT5G1_MOUSE (P48202) ATP synthase lipid-binding protein, mitocho... 27 9.3
5ACSF1_SYNY3 (P72584) Magnesium-protoporphyrin IX monomethyl este... 27 9.3

>ADO_RAT (Q9Z0U5) Aldehyde oxidase (EC 1.2.3.1)|
          Length = 1333

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = -2

Query: 195 CRSSRCCDEQEAEECTLTLGVQSSA 121
           CR+S CC+ +E   C L  G+  SA
Sbjct: 164 CRASGCCESKENGVCCLDQGINGSA 188



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>AT5G1_RAT (Q06645) ATP synthase lipid-binding protein, mitochondrial|
           precursor (EC 3.6.3.14) (ATP synthase proteolipid P1)
           (ATPase protein 9) (ATPase subunit C)
          Length = 136

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
 Frame = -1

Query: 184 PVLRRTGGRGVYLD-----LGRPEFSTKAPSCASHELQI 83
           PVL R+  RG+        L RPE  +K PSC S  LQ+
Sbjct: 11  PVLIRSCTRGLIRPVSASLLSRPEAPSKKPSCCSSPLQV 49



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>CEFE_STRCL (P18548) Deacetoxycephalosporin C synthetase (EC 1.14.20.1) (DAOCS)|
           (Expandase)
          Length = 311

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -2

Query: 150 TLTLGVQSSAPRHHLAPPMSCRLGRSS 70
           TL  G Q  APRHH+A P   ++  SS
Sbjct: 231 TLVTGGQVKAPRHHVAAPRRDQIAGSS 257



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>AT5G1_MOUSE (P48202) ATP synthase lipid-binding protein, mitochondrial|
           precursor (EC 3.6.3.14) (ATP synthase proteolipid P1)
           (ATPase protein 9) (ATPase subunit C)
          Length = 136

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 5/39 (12%)
 Frame = -1

Query: 184 PVLRRTGGRGVYLD-----LGRPEFSTKAPSCASHELQI 83
           P L R+  RG+        L RPE  +K PSC+S  LQ+
Sbjct: 11  PALIRSCTRGLIRPVSASLLSRPEAPSKQPSCSSSPLQV 49



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>ACSF1_SYNY3 (P72584) Magnesium-protoporphyrin IX monomethyl ester [oxidative]|
           cyclase 1 (EC 1.14.13.81) (Mg-protoporphyrin IX
           monomethyl ester oxidative cyclase 1)
          Length = 358

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -1

Query: 169 TGGR--GVYLDLGRPEFSTKAPSCASHELQIRSI 74
           T GR   + LD+  PEF  +  +C S+  Q+R+I
Sbjct: 281 TAGRVFPIILDVNNPEFYNRLETCVSNNEQLRAI 314


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,228,393
Number of Sequences: 219361
Number of extensions: 688759
Number of successful extensions: 1842
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1840
length of database: 80,573,946
effective HSP length: 97
effective length of database: 59,295,929
effective search space used: 1423102296
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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