| Clone Name | baet71a04 |
|---|---|
| Clone Library Name | barley_pub |
>PSBP_WHEAT (Q00434) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 176 bits (447), Expect = 1e-44 Identities = 89/124 (71%), Positives = 89/124 (71%) Frame = +1 Query: 46 MASTSCFLHQSTXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXXXXXXXX 225 MASTSCFLHQST VGRTQLFVCKA KNDEAASDAAVVTSRR Sbjct: 1 MASTSCFLHQSTARLAASARPAPAVGRTQLFVCKAQKNDEAASDAAVVTSRRAALSLLAG 60 Query: 226 XXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL 405 YGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL Sbjct: 61 AAAIAVKVSPAAAAYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL 120 Query: 406 RYED 417 RYED Sbjct: 121 RYED 124
>PSBP_CUCSA (Q9SLQ8) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (OEC23) Length = 263 Score = 119 bits (298), Expect = 3e-27 Identities = 62/128 (48%), Positives = 68/128 (53%), Gaps = 4/128 (3%) Frame = +1 Query: 46 MASTSCFLHQSTXXXXXXXXXXXXVGRT----QLFVCKAHKNDEAASDAAVVTSRRXXXX 213 MASTSCFLH QL VC+A K A + V SRR Sbjct: 1 MASTSCFLHHHALTAAARSSSSPRQAALPKSPQLLVCRAQKQQPAQEEEGGVVSRRLALT 60 Query: 214 XXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFP 393 YGEAANVFGK K NTD++ YSG+GFKL IP+KWNPSKEREFP Sbjct: 61 VLIGAAALGSKVSPADAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREFP 120 Query: 394 GQVLRYED 417 GQVLRYED Sbjct: 121 GQVLRYED 128
>PSBP_PEA (P16059) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 259 Score = 116 bits (291), Expect = 2e-26 Identities = 61/127 (48%), Positives = 69/127 (54%), Gaps = 3/127 (2%) Frame = +1 Query: 46 MASTSCFLHQS---TXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXXXXX 216 MAST CFLH T + VCKA K D+ V SRR Sbjct: 1 MASTQCFLHHQYAITTPTRTLSQRQVVTTKPNHIVCKAQKQDDVVD---AVVSRRLALSV 57 Query: 217 XXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPG 396 YGEAANVFGKAK NTD++ Y+G+GFKL++PAKWNPSKEREFPG Sbjct: 58 LIGAAAVGSKVSPADAAYGEAANVFGKAKTNTDYLPYNGDGFKLLVPAKWNPSKEREFPG 117 Query: 397 QVLRYED 417 QVLRYED Sbjct: 118 QVLRYED 124
>PSBP1_TOBAC (Q7DM39) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 268 Score = 114 bits (286), Expect = 7e-26 Identities = 61/133 (45%), Positives = 70/133 (52%), Gaps = 9/133 (6%) Frame = +1 Query: 46 MASTSCFLHQSTXXXXXXXXXXXXVGRTQL-------FVCKAHKNDEAASDA--AVVTSR 198 MAST CFLHQ + + VC+A K D +VV SR Sbjct: 1 MASTQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSR 60 Query: 199 RXXXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSK 378 R YGEAANVFGK K+NTDF+AY+G+GFKL +PAKWNPSK Sbjct: 61 RLALTVLIGAAAIGSKVSPADAAYGEAANVFGKPKENTDFLAYNGDGFKLQVPAKWNPSK 120 Query: 379 EREFPGQVLRYED 417 E EFPGQVLRYED Sbjct: 121 EVEFPGQVLRYED 133
>PSBP_SPIOL (P12302) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 267 Score = 112 bits (281), Expect = 3e-25 Identities = 61/134 (45%), Positives = 74/134 (55%), Gaps = 10/134 (7%) Frame = +1 Query: 46 MASTSCFLHQSTXXXXXXXXXXXXVGRTQL-------FVCKAHKNDEAASDAAVVTS--- 195 MAST+CFLH R Q VCKA K D+ ++A V+ S Sbjct: 1 MASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDD--NEANVLNSGVS 58 Query: 196 RRXXXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPS 375 RR YGEAANVFGK KKNT+F+ Y+G+GFKL++P+KWNPS Sbjct: 59 RRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPS 118 Query: 376 KEREFPGQVLRYED 417 KE+EFPGQVLRYED Sbjct: 119 KEKEFPGQVLRYED 132
>PSBP_SOLTU (P93566) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 111 bits (278), Expect = 6e-25 Identities = 59/124 (47%), Positives = 69/124 (55%), Gaps = 1/124 (0%) Frame = +1 Query: 49 ASTSCFLHQSTXXXXXXXXXXXXVG-RTQLFVCKAHKNDEAASDAAVVTSRRXXXXXXXX 225 AST CFLHQ + +C+A K D+A + + V SRR Sbjct: 3 ASTQCFLHQYHALRSSPARTSSVPSPKPNQLICRAQKQDDANNTSNAV-SRRLALTLLIG 61 Query: 226 XXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL 405 YGEAANVFGK K+NTDF+ Y+G+GFKL IPAKWNPSKE EFPGQVL Sbjct: 62 TAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPGQVL 121 Query: 406 RYED 417 RYED Sbjct: 122 RYED 125
>PSBP_LYCES (P29795) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 258 Score = 111 bits (278), Expect = 6e-25 Identities = 60/124 (48%), Positives = 71/124 (57%), Gaps = 1/124 (0%) Frame = +1 Query: 49 ASTSCFLHQ-STXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXXXXXXXX 225 AST CFLHQ + +C+A K D+A S+AAV SRR Sbjct: 3 ASTQCFLHQYHALRSSPARTSSVSSPKPNQLICRAQKQDDA-SNAAV--SRRLALTLLIG 59 Query: 226 XXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL 405 YGEAANVFGK K+NTDF+ Y+G+GFKL +PAKWNPSKE E+PGQVL Sbjct: 60 TAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEYPGQVL 119 Query: 406 RYED 417 RYED Sbjct: 120 RYED 123
>PSBP_FRIAG (O49080) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 264 Score = 108 bits (269), Expect = 7e-24 Identities = 57/130 (43%), Positives = 73/130 (56%), Gaps = 6/130 (4%) Frame = +1 Query: 46 MASTSCFLHQ------STXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXX 207 MAS++CFL +T + +QL +C+A K+ + +++ SRR Sbjct: 1 MASSACFLLHHAPSTPATTSRTPSHRLVPTIKPSQL-ICRAQKSSDTDENSSTAVSRRLA 59 Query: 208 XXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKERE 387 YGEAANVFGKAK NTDF+ Y+G+GF L+IPAKWNPSKE E Sbjct: 60 LTILIGSAAVGTKIAPANAAYGEAANVFGKAKTNTDFLPYTGDGFNLLIPAKWNPSKEVE 119 Query: 388 FPGQVLRYED 417 FPGQVLRYED Sbjct: 120 FPGQVLRYED 129
>PSBP_SINAL (P11594) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 260 Score = 107 bits (266), Expect = 1e-23 Identities = 56/128 (43%), Positives = 68/128 (53%), Gaps = 4/128 (3%) Frame = +1 Query: 46 MASTSCFLHQSTXXXXXXXXXXXXVGRTQL----FVCKAHKNDEAASDAAVVTSRRXXXX 213 MA ++CFLHQS + + VCKA + E + SRR Sbjct: 1 MAYSACFLHQSALASSTARSSPSSSSQRYVSISKLVCKAQQTHEEDNSTV---SRRLALT 57 Query: 214 XXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFP 393 YGEAANVFGK KKNTDF AYSG+GF++ +PAKWNPS+E E+P Sbjct: 58 LLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYP 117 Query: 394 GQVLRYED 417 GQVLRYED Sbjct: 118 GQVLRYED 125
>PSBP1_ARATH (Q42029) Oxygen-evolving enhancer protein 2-1, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 263 Score = 104 bits (259), Expect = 9e-23 Identities = 54/131 (41%), Positives = 69/131 (52%), Gaps = 7/131 (5%) Frame = +1 Query: 46 MASTSCFLHQSTXXXXXXXXXXXXVGRTQL-------FVCKAHKNDEAASDAAVVTSRRX 204 MA ++CFLHQS + + +CKA ++ E + A SRR Sbjct: 1 MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQSHEDDNSAV---SRRL 57 Query: 205 XXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKER 384 YGEAANVFGK K NTDF+ Y+G+GFK+ +PAKWNPSKE Sbjct: 58 ALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEI 117 Query: 385 EFPGQVLRYED 417 E+PGQVLR+ED Sbjct: 118 EYPGQVLRFED 128
>PSBP2_TOBAC (P18212) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 265 Score = 102 bits (255), Expect = 3e-22 Identities = 56/130 (43%), Positives = 67/130 (51%), Gaps = 6/130 (4%) Frame = +1 Query: 46 MASTSCFLHQSTXXXXXXXXXXXXVGRT----QLFVCKAHKNDEAASDA--AVVTSRRXX 207 MAST CFLH + + QL VC+A K D +V SRR Sbjct: 1 MASTQCFLHHHALSTPARTPLVRSIVPSLKPNQLLVCRAQKQSAPQEDNVNSVSVSRRLA 60 Query: 208 XXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKERE 387 YGEAANVFGK K +TDF Y+G+GFKL IP+KWNP+KE E Sbjct: 61 LTVLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVE 120 Query: 388 FPGQVLRYED 417 +PGQVLR+ED Sbjct: 121 YPGQVLRFED 130
>PSBP3_TOBAC (Q04127) Oxygen-evolving enhancer protein 2-3, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane) Length = 266 Score = 101 bits (251), Expect = 8e-22 Identities = 55/131 (41%), Positives = 65/131 (49%), Gaps = 7/131 (5%) Frame = +1 Query: 46 MASTSCFLHQSTXXXXXXXXXXXXV----GRTQLFVCKAHKNDEAASDA---AVVTSRRX 204 MAST CFLH + QL VC+A A +V SRR Sbjct: 1 MASTQCFLHHHALSTPARTSLVRGIVPSLKSNQLLVCRAQNKQSAPQQDNVNSVSVSRRL 60 Query: 205 XXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKER 384 YGEAANVFGK K +TDF Y+G+GFKL IP+KWNP+KE Sbjct: 61 ALTLLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEV 120 Query: 385 EFPGQVLRYED 417 E+PGQVLR+ED Sbjct: 121 EYPGQVLRFED 131
>PSBP2_ARATH (O49344) Oxygen-evolving enhancer protein 2-2, chloroplast| precursor (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 98.2 bits (243), Expect = 7e-21 Identities = 56/132 (42%), Positives = 68/132 (51%), Gaps = 8/132 (6%) Frame = +1 Query: 46 MASTSCFLHQSTXXXXXXXXXXXX--------VGRTQLFVCKAHKNDEAASDAAVVTSRR 201 MA + FLHQS + R VC+A ++ E + A V R Sbjct: 1 MAYSPSFLHQSALASSAGRSSSSSSSSFRHVSLSRPVHLVCRAQQSQENNNSA--VFRRL 58 Query: 202 XXXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKE 381 YGEAANVFGK KKNTDF+ Y+GEGFK+ IP+KWNPSKE Sbjct: 59 ALTLLVGAAAIGSKVSPAPXAAYGEAANVFGKPKKNTDFLPYTGEGFKIQIPSKWNPSKE 118 Query: 382 REFPGQVLRYED 417 E+PGQVLR+ED Sbjct: 119 IEYPGQVLRFED 130
>PSBP_NARPS (Q40407) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) Length = 265 Score = 95.1 bits (235), Expect = 6e-20 Identities = 52/130 (40%), Positives = 67/130 (51%), Gaps = 6/130 (4%) Frame = +1 Query: 46 MASTSCFLHQ-----STXXXXXXXXXXXXVGRTQLFVCKAHKND-EAASDAAVVTSRRXX 207 MAST+CFLH +T + Q + + + A++ + SRR Sbjct: 1 MASTACFLHHHAPSPATSNLSRTRSATNRDEQQQEHSARLQSPEADCATENDALLSRRLA 60 Query: 208 XXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKERE 387 YGE+ANVFGK K NTDF +G+GFK++IP+KWNPSKE E Sbjct: 61 LTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKWNPSKEVE 120 Query: 388 FPGQVLRYED 417 FPGQVLRYED Sbjct: 121 FPGQVLRYED 130
>PSBP_BRAJU (Q96334) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) (23 kDa subunit of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (Fragment) Length = 217 Score = 87.8 bits (216), Expect = 9e-18 Identities = 41/81 (50%), Positives = 48/81 (59%) Frame = +1 Query: 175 DAAVVTSRRXXXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMI 354 D SRR YGEAANVFGK K NTDF A +G+GF++ + Sbjct: 2 DDTSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFTAINGDGFQVQV 61 Query: 355 PAKWNPSKEREFPGQVLRYED 417 PAKWNPS+E E+PGQVLRYED Sbjct: 62 PAKWNPSREVEYPGQVLRYED 82
>PSBP_CHLRE (P11471) Oxygen-evolving enhancer protein 2, chloroplast precursor| (OEE2) Length = 245 Score = 79.0 bits (193), Expect = 4e-15 Identities = 32/50 (64%), Positives = 41/50 (82%) Frame = +1 Query: 268 YGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVLRYED 417 YG++ANVFGK + FV Y+G+GF L++PAKWNPSKE +FPG +LRYED Sbjct: 59 YGDSANVFGKVTNKSGFVPYAGDGFALLLPAKWNPSKENDFPGVILRYED 108
>PSBP_EUGGR (P83687) Oxygen-evolving enhancer protein 2 (OEE2) (23 kDa subunit| of oxygen evolving system of photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid membrane protein) (Fragment) Length = 30 Score = 33.5 bits (75), Expect = 0.20 Identities = 14/25 (56%), Positives = 17/25 (68%) Frame = +1 Query: 268 YGEAANVFGKAKKNTDFVAYSGEGF 342 YGE ANVFGK K+ F SG+G+ Sbjct: 2 YGEGANVFGKRKETDQFFEISGDGW 26
>TERT_HUMAN (O14746) Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase| catalytic subunit) (HEST2) (Telomerase-associated protein 2) (TP2) Length = 1132 Score = 29.6 bits (65), Expect = 2.9 Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 8/49 (16%) Frame = -1 Query: 166 PRHSCAPCRRTAGCARR-----REQGAPR---QPGARWTGGGSRRWTPL 44 P H+ P RR GC R RE G P PGAR GG + R PL Sbjct: 187 PPHASGP-RRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPL 234
>UPPP_LACPL (Q88SK7) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl| pyrophosphate phosphatase) (Bacitracin resistance protein) Length = 275 Score = 28.5 bits (62), Expect = 6.6 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -3 Query: 404 STCPGNSRSLLGFHLAGIISLNPSPLYATKSVFFFALPNTF 282 S PG SRS G + G I + S AT+ FF A+P F Sbjct: 163 SLIPGTSRS--GATILGAILIGTSRYVATEFSFFMAIPTMF 201
>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC| 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 550 Score = 28.5 bits (62), Expect = 6.6 Identities = 12/17 (70%), Positives = 13/17 (76%) Frame = -1 Query: 106 GAPRQPGARWTGGGSRR 56 GAPR PG R GGG+RR Sbjct: 525 GAPRGPGGRPPGGGNRR 541
>YZN4_CAEEL (P54245) Hypothetical acetylcholine receptor-like protein F18G5.4| precursor Length = 615 Score = 28.1 bits (61), Expect = 8.6 Identities = 10/18 (55%), Positives = 10/18 (55%) Frame = -1 Query: 412 RNGAPAQGTHAPCWGSTW 359 RNGA QG H P W W Sbjct: 410 RNGAANQGRHVPAWMQKW 427 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,754,995 Number of Sequences: 219361 Number of extensions: 683738 Number of successful extensions: 2157 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 2084 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2143 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2228238148 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)