ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet71a04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1PSBP_WHEAT (Q00434) Oxygen-evolving enhancer protein 2, chloropl... 176 1e-44
2PSBP_CUCSA (Q9SLQ8) Oxygen-evolving enhancer protein 2, chloropl... 119 3e-27
3PSBP_PEA (P16059) Oxygen-evolving enhancer protein 2, chloroplas... 116 2e-26
4PSBP1_TOBAC (Q7DM39) Oxygen-evolving enhancer protein 2-1, chlor... 114 7e-26
5PSBP_SPIOL (P12302) Oxygen-evolving enhancer protein 2, chloropl... 112 3e-25
6PSBP_SOLTU (P93566) Oxygen-evolving enhancer protein 2, chloropl... 111 6e-25
7PSBP_LYCES (P29795) Oxygen-evolving enhancer protein 2, chloropl... 111 6e-25
8PSBP_FRIAG (O49080) Oxygen-evolving enhancer protein 2, chloropl... 108 7e-24
9PSBP_SINAL (P11594) Oxygen-evolving enhancer protein 2, chloropl... 107 1e-23
10PSBP1_ARATH (Q42029) Oxygen-evolving enhancer protein 2-1, chlor... 104 9e-23
11PSBP2_TOBAC (P18212) Oxygen-evolving enhancer protein 2-2, chlor... 102 3e-22
12PSBP3_TOBAC (Q04127) Oxygen-evolving enhancer protein 2-3, chlor... 101 8e-22
13PSBP2_ARATH (O49344) Oxygen-evolving enhancer protein 2-2, chlor... 98 7e-21
14PSBP_NARPS (Q40407) Oxygen-evolving enhancer protein 2, chloropl... 95 6e-20
15PSBP_BRAJU (Q96334) Oxygen-evolving enhancer protein 2, chloropl... 88 9e-18
16PSBP_CHLRE (P11471) Oxygen-evolving enhancer protein 2, chloropl... 79 4e-15
17PSBP_EUGGR (P83687) Oxygen-evolving enhancer protein 2 (OEE2) (2... 33 0.20
18TERT_HUMAN (O14746) Telomerase reverse transcriptase (EC 2.7.7.4... 30 2.9
19UPPP_LACPL (Q88SK7) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Un... 28 6.6
20RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine syntha... 28 6.6
21YZN4_CAEEL (P54245) Hypothetical acetylcholine receptor-like pro... 28 8.6

>PSBP_WHEAT (Q00434) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 258

 Score =  176 bits (447), Expect = 1e-44
 Identities = 89/124 (71%), Positives = 89/124 (71%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXXXXXXXX 225
           MASTSCFLHQST            VGRTQLFVCKA KNDEAASDAAVVTSRR        
Sbjct: 1   MASTSCFLHQSTARLAASARPAPAVGRTQLFVCKAQKNDEAASDAAVVTSRRAALSLLAG 60

Query: 226 XXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL 405
                         YGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL
Sbjct: 61  AAAIAVKVSPAAAAYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL 120

Query: 406 RYED 417
           RYED
Sbjct: 121 RYED 124



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>PSBP_CUCSA (Q9SLQ8) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein) (OEC23)
          Length = 263

 Score =  119 bits (298), Expect = 3e-27
 Identities = 62/128 (48%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXXVGRT----QLFVCKAHKNDEAASDAAVVTSRRXXXX 213
           MASTSCFLH                       QL VC+A K   A  +   V SRR    
Sbjct: 1   MASTSCFLHHHALTAAARSSSSPRQAALPKSPQLLVCRAQKQQPAQEEEGGVVSRRLALT 60

Query: 214 XXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFP 393
                             YGEAANVFGK K NTD++ YSG+GFKL IP+KWNPSKEREFP
Sbjct: 61  VLIGAAALGSKVSPADAAYGEAANVFGKPKSNTDYLPYSGDGFKLSIPSKWNPSKEREFP 120

Query: 394 GQVLRYED 417
           GQVLRYED
Sbjct: 121 GQVLRYED 128



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>PSBP_PEA (P16059) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 259

 Score =  116 bits (291), Expect = 2e-26
 Identities = 61/127 (48%), Positives = 69/127 (54%), Gaps = 3/127 (2%)
 Frame = +1

Query: 46  MASTSCFLHQS---TXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXXXXX 216
           MAST CFLH     T              +    VCKA K D+       V SRR     
Sbjct: 1   MASTQCFLHHQYAITTPTRTLSQRQVVTTKPNHIVCKAQKQDDVVD---AVVSRRLALSV 57

Query: 217 XXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPG 396
                            YGEAANVFGKAK NTD++ Y+G+GFKL++PAKWNPSKEREFPG
Sbjct: 58  LIGAAAVGSKVSPADAAYGEAANVFGKAKTNTDYLPYNGDGFKLLVPAKWNPSKEREFPG 117

Query: 397 QVLRYED 417
           QVLRYED
Sbjct: 118 QVLRYED 124



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>PSBP1_TOBAC (Q7DM39) Oxygen-evolving enhancer protein 2-1, chloroplast|
           precursor (OEE2) (23 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 23 kDa subunit) (23 kDa
           thylakoid membrane)
          Length = 268

 Score =  114 bits (286), Expect = 7e-26
 Identities = 61/133 (45%), Positives = 70/133 (52%), Gaps = 9/133 (6%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXXVGRTQL-------FVCKAHKNDEAASDA--AVVTSR 198
           MAST CFLHQ                +  +        VC+A K      D   +VV SR
Sbjct: 1   MASTQCFLHQHALSSSAARTTSSVSSQRYVSSLKPNQLVCRAQKQSSPQEDDGNSVVVSR 60

Query: 199 RXXXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSK 378
           R                      YGEAANVFGK K+NTDF+AY+G+GFKL +PAKWNPSK
Sbjct: 61  RLALTVLIGAAAIGSKVSPADAAYGEAANVFGKPKENTDFLAYNGDGFKLQVPAKWNPSK 120

Query: 379 EREFPGQVLRYED 417
           E EFPGQVLRYED
Sbjct: 121 EVEFPGQVLRYED 133



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>PSBP_SPIOL (P12302) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 267

 Score =  112 bits (281), Expect = 3e-25
 Identities = 61/134 (45%), Positives = 74/134 (55%), Gaps = 10/134 (7%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXXVGRTQL-------FVCKAHKNDEAASDAAVVTS--- 195
           MAST+CFLH                 R Q         VCKA K D+  ++A V+ S   
Sbjct: 1   MASTACFLHHHAAISSPAAGRGSAAQRYQAVSIKPNQIVCKAQKQDD--NEANVLNSGVS 58

Query: 196 RRXXXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPS 375
           RR                      YGEAANVFGK KKNT+F+ Y+G+GFKL++P+KWNPS
Sbjct: 59  RRLALTVLIGAAAVGSKVSPADAAYGEAANVFGKPKKNTEFMPYNGDGFKLLVPSKWNPS 118

Query: 376 KEREFPGQVLRYED 417
           KE+EFPGQVLRYED
Sbjct: 119 KEKEFPGQVLRYED 132



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>PSBP_SOLTU (P93566) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 260

 Score =  111 bits (278), Expect = 6e-25
 Identities = 59/124 (47%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
 Frame = +1

Query: 49  ASTSCFLHQSTXXXXXXXXXXXXVG-RTQLFVCKAHKNDEAASDAAVVTSRRXXXXXXXX 225
           AST CFLHQ                 +    +C+A K D+A + +  V SRR        
Sbjct: 3   ASTQCFLHQYHALRSSPARTSSVPSPKPNQLICRAQKQDDANNTSNAV-SRRLALTLLIG 61

Query: 226 XXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL 405
                         YGEAANVFGK K+NTDF+ Y+G+GFKL IPAKWNPSKE EFPGQVL
Sbjct: 62  TAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQIPAKWNPSKEIEFPGQVL 121

Query: 406 RYED 417
           RYED
Sbjct: 122 RYED 125



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>PSBP_LYCES (P29795) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 258

 Score =  111 bits (278), Expect = 6e-25
 Identities = 60/124 (48%), Positives = 71/124 (57%), Gaps = 1/124 (0%)
 Frame = +1

Query: 49  ASTSCFLHQ-STXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXXXXXXXX 225
           AST CFLHQ                 +    +C+A K D+A S+AAV  SRR        
Sbjct: 3   ASTQCFLHQYHALRSSPARTSSVSSPKPNQLICRAQKQDDA-SNAAV--SRRLALTLLIG 59

Query: 226 XXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVL 405
                         YGEAANVFGK K+NTDF+ Y+G+GFKL +PAKWNPSKE E+PGQVL
Sbjct: 60  TAAIGSKVSPADAAYGEAANVFGKPKENTDFLPYNGDGFKLQVPAKWNPSKEVEYPGQVL 119

Query: 406 RYED 417
           RYED
Sbjct: 120 RYED 123



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>PSBP_FRIAG (O49080) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 264

 Score =  108 bits (269), Expect = 7e-24
 Identities = 57/130 (43%), Positives = 73/130 (56%), Gaps = 6/130 (4%)
 Frame = +1

Query: 46  MASTSCFLHQ------STXXXXXXXXXXXXVGRTQLFVCKAHKNDEAASDAAVVTSRRXX 207
           MAS++CFL        +T            +  +QL +C+A K+ +   +++   SRR  
Sbjct: 1   MASSACFLLHHAPSTPATTSRTPSHRLVPTIKPSQL-ICRAQKSSDTDENSSTAVSRRLA 59

Query: 208 XXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKERE 387
                               YGEAANVFGKAK NTDF+ Y+G+GF L+IPAKWNPSKE E
Sbjct: 60  LTILIGSAAVGTKIAPANAAYGEAANVFGKAKTNTDFLPYTGDGFNLLIPAKWNPSKEVE 119

Query: 388 FPGQVLRYED 417
           FPGQVLRYED
Sbjct: 120 FPGQVLRYED 129



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>PSBP_SINAL (P11594) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 260

 Score =  107 bits (266), Expect = 1e-23
 Identities = 56/128 (43%), Positives = 68/128 (53%), Gaps = 4/128 (3%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXXVGRTQL----FVCKAHKNDEAASDAAVVTSRRXXXX 213
           MA ++CFLHQS               +  +     VCKA +  E  +      SRR    
Sbjct: 1   MAYSACFLHQSALASSTARSSPSSSSQRYVSISKLVCKAQQTHEEDNSTV---SRRLALT 57

Query: 214 XXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFP 393
                             YGEAANVFGK KKNTDF AYSG+GF++ +PAKWNPS+E E+P
Sbjct: 58  LLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSREVEYP 117

Query: 394 GQVLRYED 417
           GQVLRYED
Sbjct: 118 GQVLRYED 125



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>PSBP1_ARATH (Q42029) Oxygen-evolving enhancer protein 2-1, chloroplast|
           precursor (OEE2) (23 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 23 kDa subunit) (23 kDa
           thylakoid membrane protein)
          Length = 263

 Score =  104 bits (259), Expect = 9e-23
 Identities = 54/131 (41%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXXVGRTQL-------FVCKAHKNDEAASDAAVVTSRRX 204
           MA ++CFLHQS               +  +        +CKA ++ E  + A    SRR 
Sbjct: 1   MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQSHEDDNSAV---SRRL 57

Query: 205 XXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKER 384
                                YGEAANVFGK K NTDF+ Y+G+GFK+ +PAKWNPSKE 
Sbjct: 58  ALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEI 117

Query: 385 EFPGQVLRYED 417
           E+PGQVLR+ED
Sbjct: 118 EYPGQVLRFED 128



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>PSBP2_TOBAC (P18212) Oxygen-evolving enhancer protein 2-2, chloroplast|
           precursor (OEE2) (23 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 23 kDa subunit) (23 kDa
           thylakoid membrane)
          Length = 265

 Score =  102 bits (255), Expect = 3e-22
 Identities = 56/130 (43%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXXVGRT----QLFVCKAHKNDEAASDA--AVVTSRRXX 207
           MAST CFLH               +  +    QL VC+A K      D   +V  SRR  
Sbjct: 1   MASTQCFLHHHALSTPARTPLVRSIVPSLKPNQLLVCRAQKQSAPQEDNVNSVSVSRRLA 60

Query: 208 XXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKERE 387
                               YGEAANVFGK K +TDF  Y+G+GFKL IP+KWNP+KE E
Sbjct: 61  LTVLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEVE 120

Query: 388 FPGQVLRYED 417
           +PGQVLR+ED
Sbjct: 121 YPGQVLRFED 130



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>PSBP3_TOBAC (Q04127) Oxygen-evolving enhancer protein 2-3, chloroplast|
           precursor (OEE2) (23 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 23 kDa subunit) (23 kDa
           thylakoid membrane)
          Length = 266

 Score =  101 bits (251), Expect = 8e-22
 Identities = 55/131 (41%), Positives = 65/131 (49%), Gaps = 7/131 (5%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXXV----GRTQLFVCKAHKNDEAASDA---AVVTSRRX 204
           MAST CFLH               +       QL VC+A     A       +V  SRR 
Sbjct: 1   MASTQCFLHHHALSTPARTSLVRGIVPSLKSNQLLVCRAQNKQSAPQQDNVNSVSVSRRL 60

Query: 205 XXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKER 384
                                YGEAANVFGK K +TDF  Y+G+GFKL IP+KWNP+KE 
Sbjct: 61  ALTLLIGAAAVGSKVSPADAAYGEAANVFGKPKTDTDFQTYNGDGFKLQIPSKWNPNKEV 120

Query: 385 EFPGQVLRYED 417
           E+PGQVLR+ED
Sbjct: 121 EYPGQVLRFED 131



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>PSBP2_ARATH (O49344) Oxygen-evolving enhancer protein 2-2, chloroplast|
           precursor (OEE2) (23 kDa subunit of oxygen evolving
           system of photosystem II) (OEC 23 kDa subunit) (23 kDa
           thylakoid membrane protein)
          Length = 265

 Score = 98.2 bits (243), Expect = 7e-21
 Identities = 56/132 (42%), Positives = 68/132 (51%), Gaps = 8/132 (6%)
 Frame = +1

Query: 46  MASTSCFLHQSTXXXXXXXXXXXX--------VGRTQLFVCKAHKNDEAASDAAVVTSRR 201
           MA +  FLHQS                     + R    VC+A ++ E  + A  V  R 
Sbjct: 1   MAYSPSFLHQSALASSAGRSSSSSSSSFRHVSLSRPVHLVCRAQQSQENNNSA--VFRRL 58

Query: 202 XXXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKE 381
                                 YGEAANVFGK KKNTDF+ Y+GEGFK+ IP+KWNPSKE
Sbjct: 59  ALTLLVGAAAIGSKVSPAPXAAYGEAANVFGKPKKNTDFLPYTGEGFKIQIPSKWNPSKE 118

Query: 382 REFPGQVLRYED 417
            E+PGQVLR+ED
Sbjct: 119 IEYPGQVLRFED 130



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>PSBP_NARPS (Q40407) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein)
          Length = 265

 Score = 95.1 bits (235), Expect = 6e-20
 Identities = 52/130 (40%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
 Frame = +1

Query: 46  MASTSCFLHQ-----STXXXXXXXXXXXXVGRTQLFVCKAHKND-EAASDAAVVTSRRXX 207
           MAST+CFLH      +T              + Q    +    + + A++   + SRR  
Sbjct: 1   MASTACFLHHHAPSPATSNLSRTRSATNRDEQQQEHSARLQSPEADCATENDALLSRRLA 60

Query: 208 XXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKERE 387
                               YGE+ANVFGK K NTDF   +G+GFK++IP+KWNPSKE E
Sbjct: 61  LTILIGGAALGSRVSAADAAYGESANVFGKPKTNTDFQTVTGDGFKILIPSKWNPSKEVE 120

Query: 388 FPGQVLRYED 417
           FPGQVLRYED
Sbjct: 121 FPGQVLRYED 130



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>PSBP_BRAJU (Q96334) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2) (23 kDa subunit of oxygen evolving system of
           photosystem II) (OEC 23 kDa subunit) (23 kDa thylakoid
           membrane protein) (Fragment)
          Length = 217

 Score = 87.8 bits (216), Expect = 9e-18
 Identities = 41/81 (50%), Positives = 48/81 (59%)
 Frame = +1

Query: 175 DAAVVTSRRXXXXXXXXXXXXXXXXXXXXXXYGEAANVFGKAKKNTDFVAYSGEGFKLMI 354
           D     SRR                      YGEAANVFGK K NTDF A +G+GF++ +
Sbjct: 2   DDTSTVSRRLALTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFTAINGDGFQVQV 61

Query: 355 PAKWNPSKEREFPGQVLRYED 417
           PAKWNPS+E E+PGQVLRYED
Sbjct: 62  PAKWNPSREVEYPGQVLRYED 82



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>PSBP_CHLRE (P11471) Oxygen-evolving enhancer protein 2, chloroplast precursor|
           (OEE2)
          Length = 245

 Score = 79.0 bits (193), Expect = 4e-15
 Identities = 32/50 (64%), Positives = 41/50 (82%)
 Frame = +1

Query: 268 YGEAANVFGKAKKNTDFVAYSGEGFKLMIPAKWNPSKEREFPGQVLRYED 417
           YG++ANVFGK    + FV Y+G+GF L++PAKWNPSKE +FPG +LRYED
Sbjct: 59  YGDSANVFGKVTNKSGFVPYAGDGFALLLPAKWNPSKENDFPGVILRYED 108



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>PSBP_EUGGR (P83687) Oxygen-evolving enhancer protein 2 (OEE2) (23 kDa subunit|
           of oxygen evolving system of photosystem II) (OEC 23 kDa
           subunit) (23 kDa thylakoid membrane protein) (Fragment)
          Length = 30

 Score = 33.5 bits (75), Expect = 0.20
 Identities = 14/25 (56%), Positives = 17/25 (68%)
 Frame = +1

Query: 268 YGEAANVFGKAKKNTDFVAYSGEGF 342
           YGE ANVFGK K+   F   SG+G+
Sbjct: 2   YGEGANVFGKRKETDQFFEISGDGW 26



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>TERT_HUMAN (O14746) Telomerase reverse transcriptase (EC 2.7.7.49) (Telomerase|
           catalytic subunit) (HEST2) (Telomerase-associated
           protein 2) (TP2)
          Length = 1132

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 21/49 (42%), Positives = 23/49 (46%), Gaps = 8/49 (16%)
 Frame = -1

Query: 166 PRHSCAPCRRTAGCARR-----REQGAPR---QPGARWTGGGSRRWTPL 44
           P H+  P RR  GC R      RE G P     PGAR  GG + R  PL
Sbjct: 187 PPHASGP-RRRLGCERAWNHSVREAGVPLGLPAPGARRRGGSASRSLPL 234



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>UPPP_LACPL (Q88SK7) Undecaprenyl-diphosphatase (EC 3.6.1.27) (Undecaprenyl|
           pyrophosphate phosphatase) (Bacitracin resistance
           protein)
          Length = 275

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = -3

Query: 404 STCPGNSRSLLGFHLAGIISLNPSPLYATKSVFFFALPNTF 282
           S  PG SRS  G  + G I +  S   AT+  FF A+P  F
Sbjct: 163 SLIPGTSRS--GATILGAILIGTSRYVATEFSFFMAIPTMF 201



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>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC|
           5.4.99.-) (rRNA-uridine isomerase B) (rRNA
           pseudouridylate synthase B)
          Length = 550

 Score = 28.5 bits (62), Expect = 6.6
 Identities = 12/17 (70%), Positives = 13/17 (76%)
 Frame = -1

Query: 106 GAPRQPGARWTGGGSRR 56
           GAPR PG R  GGG+RR
Sbjct: 525 GAPRGPGGRPPGGGNRR 541



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>YZN4_CAEEL (P54245) Hypothetical acetylcholine receptor-like protein F18G5.4|
           precursor
          Length = 615

 Score = 28.1 bits (61), Expect = 8.6
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = -1

Query: 412 RNGAPAQGTHAPCWGSTW 359
           RNGA  QG H P W   W
Sbjct: 410 RNGAANQGRHVPAWMQKW 427


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,754,995
Number of Sequences: 219361
Number of extensions: 683738
Number of successful extensions: 2157
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2143
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2228238148
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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