ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet70h05 |
|---|---|
| Clone Library Name | barley_pub |
>MEGL_PSEPU (P13254) Methionine gamma-lyase (EC 4.4.1.11) (L-methioninase)| Length = 398 Score = 48.5 bits (114), Expect = 9e-06 Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 3/95 (3%) Frame = +2 Query: 197 PAAALAAARHEFG--EHGGVNMS-IEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRH 367 P A A H + +HGG + + +ATFT + F GE + YSR Sbjct: 8 PGFATRAIHHGYDPQDHGGALVPPVYQTATFTFPTVEYGAACFAGEQAG-----HFYSRI 62 Query: 368 FNPTVLALGRQMAALEGTEAAYCTASGMSAISSVL 472 NPT+ L +MA+LEG EA ASGM AI+S L Sbjct: 63 SNPTLNLLEARMASLEGGEAGLALASGMGAITSTL 97
>METZ_PSEAE (P55218) O-succinylhomoserine sulfhydrylase (EC 2.5.1.-) (OSH| sulfhydrylase) Length = 403 Score = 45.8 bits (107), Expect = 6e-05 Identities = 32/80 (40%), Positives = 42/80 (52%) Frame = +2 Query: 233 GEHGGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAAL 412 GEHG + +S F R F GE+ +YSR+ NPTV ++AAL Sbjct: 34 GEHGEA-LFTTSSYVFRTAADAAAR--FAGEVPGN-----VYSRYTNPTVRTFEERIAAL 85 Query: 413 EGTEAAYCTASGMSAISSVL 472 EG E A TASGMSAI +++ Sbjct: 86 EGAEQAVATASGMSAILALV 105
>MET17_KLULA (Q92441) Protein MET17 [Includes: O-acetylhomoserine sulfhydrylase| (EC 2.5.1.49) (OAH sulfhydrylase) (Homocysteine synthase); O-acetylserine sulfhydrylase (EC 2.5.1.47) (OAS sulfhydrylase)] Length = 443 Score = 40.0 bits (92), Expect = 0.003 Identities = 20/36 (55%), Positives = 26/36 (72%) Frame = +2 Query: 350 YIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSA 457 YIYSR NPT+ L +++AALEG AA T+SG +A Sbjct: 52 YIYSRIMNPTLDVLEKRLAALEGGIAALATSSGQAA 87
>METB_HELPJ (Q9ZMW7) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 380 Score = 38.5 bits (88), Expect = 0.009 Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = +2 Query: 239 HGGVNMSIEASA-TFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALE 415 HGG+N A + + + T R+ +G +G Y YSR NPT AL +A LE Sbjct: 9 HGGINEDATTGAVSVPIYQTSTYRQ---DAIGRHKG--YEYSRSGNPTRFALEELIADLE 63 Query: 416 GTEAAYCTASGMSAISSV 469 G + ASG++ I +V Sbjct: 64 GGVKGFAFASGLAGIHAV 81
>METC_ARATH (P53780) Cystathionine beta-lyase, chloroplast precursor (EC| 4.4.1.8) (CBL) (Beta-cystathionase) (Cysteine lyase) Length = 464 Score = 38.1 bits (87), Expect = 0.012 Identities = 30/108 (27%), Positives = 51/108 (47%) Frame = +2 Query: 146 NGSTEEKALKARRRESDPAAALAAARHEFGEHGGVNMSIEASATFTVMEPDTMRRLFTGE 325 N +T+ + E+ + L ++F ++ + +ATF +P + E Sbjct: 70 NNTTDSLNTMNIKEEASVSTLLVNLDNKFDPFDAMSTPLYQTATFK--QPSAI------E 121 Query: 326 LGPERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSV 469 GP Y Y+R NPT AL +A L+ + A+C SGM+A+S+V Sbjct: 122 NGP-----YDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSAV 164
>CYSD_SCHPO (O13326) O-acetylhomoserine (thiol)-lyase (EC 2.5.1.49)| (O-acetylhomoserine sulfhydrylase) (OAH sulfhydrylase) (Homocysteine synthase) Length = 429 Score = 37.7 bits (86), Expect = 0.015 Identities = 20/41 (48%), Positives = 25/41 (60%) Frame = +2 Query: 350 YIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSVL 472 YIYSR NPT +++AALE AA T+SG SA+ L Sbjct: 55 YIYSRMMNPTADVFEKRIAALEHGAAAIATSSGTSALFMAL 95
>METB_HELPY (P56069) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 380 Score = 36.6 bits (83), Expect = 0.034 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = +2 Query: 239 HGGVNMSIEASA-TFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALE 415 HGG++ A + + + T R+ +G +G Y YSR NPT AL +A LE Sbjct: 9 HGGISEDATTGAVSVPIYQTSTYRQ---DAIGRHKG--YEYSRSGNPTRFALEELIADLE 63 Query: 416 GTEAAYCTASGMSAISSV 469 G + ASG++ I +V Sbjct: 64 GGVKGFAFASGLAGIHAV 81
>MET17_YEAST (P06106) Protein MET17 [Includes: O-acetylhomoserine sulfhydrylase| (EC 2.5.1.49) (OAH sulfhydrylase) (Homocysteine synthase); O-acetylserine sulfhydrylase (EC 2.5.1.47) (OAS sulfhydrylase)] Length = 443 Score = 36.2 bits (82), Expect = 0.044 Identities = 18/36 (50%), Positives = 23/36 (63%) Frame = +2 Query: 350 YIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSA 457 Y+YSR NPT L ++AALEG AA +SG +A Sbjct: 53 YVYSRFQNPTSNVLEERIAALEGGAAALAVSSGQAA 88
>METB_ARATH (P55217) Cystathionine gamma-synthase, chloroplast precursor (EC| 2.5.1.48) (CGS) (O-succinylhomoserine (thiol)-lyase) Length = 563 Score = 35.4 bits (80), Expect = 0.075 Identities = 18/46 (39%), Positives = 28/46 (60%) Frame = +2 Query: 335 ERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSVL 472 +R + Y R+ NPT + L +++ALEG E+ ASGM A + +L Sbjct: 219 KRSVSFEYGRYGNPTTVVLEDKISALEGAESTLVMASGMCASTVML 264
>METB_ECOLI (P00935) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 386 Score = 35.4 bits (80), Expect = 0.075 Identities = 30/88 (34%), Positives = 41/88 (46%) Frame = +2 Query: 206 ALAAARHEFGEHGGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVL 385 A+ + ++ ++G V I S+T+ FTG P D YSR NPT Sbjct: 9 AVRSGLNDDEQYGCVVPPIHLSSTYN----------FTGFNEPRAHD---YSRRGNPTRD 55 Query: 386 ALGRQMAALEGTEAAYCTASGMSAISSV 469 + R +A LEG A T +GMSAI V Sbjct: 56 VVQRALAELEGGAGAVLTNTGMSAIHLV 83
>CYSD_EMENI (P50125) O-acetylhomoserine (thiol)-lyase (EC 2.5.1.49)| (O-acetylhomoserine sulfhydrylase) (OAH sulfhydrylase) (Homocysteine synthase) Length = 437 Score = 35.0 bits (79), Expect = 0.099 Identities = 18/35 (51%), Positives = 23/35 (65%) Frame = +2 Query: 353 IYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSA 457 IYSR NPTV +++AALEG AA +SG +A Sbjct: 57 IYSRIMNPTVDVFEKRIAALEGGVAAVAASSGQAA 91
>METC_LACLC (P0A4K3) Cystathionine beta-lyase (EC 4.4.1.8) (CBL)| (Beta-cystathionase) (Cysteine lyase) Length = 380 Score = 33.1 bits (74), Expect = 0.37 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Frame = +2 Query: 239 HGGVNMSIEASA-TFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALE 415 HGG++ A + + + T ++ G+ P+ Y YSR NPT AL +A LE Sbjct: 10 HGGISTDKTTGAVSVPIYQTSTYKQNGLGQ--PKE---YEYSRSGNPTRHALEELIADLE 64 Query: 416 GTEAAYCTASGMSAISSVL 472 G + +SG++ I +VL Sbjct: 65 GGVQGFAFSSGLAGIHAVL 83
>METC_LACLA (P0A4K2) Cystathionine beta-lyase (EC 4.4.1.8) (CBL)| (Beta-cystathionase) (Cysteine lyase) Length = 380 Score = 33.1 bits (74), Expect = 0.37 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Frame = +2 Query: 239 HGGVNMSIEASA-TFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALE 415 HGG++ A + + + T ++ G+ P+ Y YSR NPT AL +A LE Sbjct: 10 HGGISTDKTTGAVSVPIYQTSTYKQNGLGQ--PKE---YEYSRSGNPTRHALEELIADLE 64 Query: 416 GTEAAYCTASGMSAISSVL 472 G + +SG++ I +VL Sbjct: 65 GGVQGFAFSSGLAGIHAVL 83
>CYS3_YEAST (P31373) Cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) Length = 393 Score = 32.0 bits (71), Expect = 0.83 Identities = 22/78 (28%), Positives = 35/78 (44%) Frame = +2 Query: 239 HGGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALEG 418 H G ++ + S V+EP ++ F Y YSR NP L R +AALE Sbjct: 14 HAGEHVDVHGS----VIEPISLSTTFKQSSPANPIGTYEYSRSQNPNRENLERAVAALEN 69 Query: 419 TEAAYCTASGMSAISSVL 472 + +SG + +++L Sbjct: 70 AQYGLAFSSGSATTATIL 87
>METB_MYCTU (P66875) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 388 Score = 32.0 bits (71), Expect = 0.83 Identities = 27/77 (35%), Positives = 36/77 (46%) Frame = +2 Query: 242 GGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALEGT 421 G VN+ I AS+TF +G RG + Y+R NPT AL +AA+E Sbjct: 30 GAVNVPIYASSTFA-----------QDGVGGLRGG-FEYARTGNPTRAALEASLAAVEEG 77 Query: 422 EAAYCTASGMSAISSVL 472 A +SGM+A L Sbjct: 78 AFARAFSSGMAATDCAL 94
>METB_MYCBO (P66876) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 388 Score = 32.0 bits (71), Expect = 0.83 Identities = 27/77 (35%), Positives = 36/77 (46%) Frame = +2 Query: 242 GGVNMSIEASATFTVMEPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQMAALEGT 421 G VN+ I AS+TF +G RG + Y+R NPT AL +AA+E Sbjct: 30 GAVNVPIYASSTFA-----------QDGVGGLRGG-FEYARTGNPTRAALEASLAAVEEG 77 Query: 422 EAAYCTASGMSAISSVL 472 A +SGM+A L Sbjct: 78 AFARAFSSGMAATDCAL 94
>CGL_RAT (P18757) Cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) (Probasin-related antigen) (PRB-RA) Length = 398 Score = 32.0 bits (71), Expect = 0.83 Identities = 15/46 (32%), Positives = 27/46 (58%) Frame = +2 Query: 332 PERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSV 469 P + ++YSR NPT L + +AAL+G + A G++A +++ Sbjct: 51 PGQSSGFVYSRSGNPTRNCLEKAVAALDGAKHCLTFARGLAATTTI 96
>METB_HERAU (P24601) Probable cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) (Fragment) Length = 319 Score = 31.6 bits (70), Expect = 1.1 Identities = 18/41 (43%), Positives = 25/41 (60%) Frame = +2 Query: 350 YIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSVL 472 Y YSR NPT AL +AALE + A ASG+ A ++++ Sbjct: 44 YEYSRTDNPTRTALQTCLAALEEAKHALVFASGLGASTTLM 84
>CGL_MOUSE (Q8VCN5) Cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) Length = 398 Score = 31.2 bits (69), Expect = 1.4 Identities = 16/46 (34%), Positives = 27/46 (58%) Frame = +2 Query: 332 PERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSV 469 P + + YSR NPT L + +AAL+G + + ASG++A ++ Sbjct: 51 PGQSSGFEYSRSGNPTRNCLEKAVAALDGAKHSLAFASGLAATITI 96
>CGL_MACFA (Q60HG7) Cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) Length = 405 Score = 30.4 bits (67), Expect = 2.4 Identities = 16/49 (32%), Positives = 27/49 (55%) Frame = +2 Query: 323 ELGPERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSV 469 + P + + YSR NPT L + +AAL+G + ASG++A ++ Sbjct: 49 QAAPGQHSGFEYSRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVTI 97
>UL56_HHV11 (P10240) Protein UL56| Length = 197 Score = 30.0 bits (66), Expect = 3.2 Identities = 21/70 (30%), Positives = 30/70 (42%) Frame = +2 Query: 113 PTPQNDGFGDDNGSTEEKALKARRRESDPAAALAAARHEFGEHGGVNMSIEASATFTVME 292 PT +G + G + + A +A RR + A A R FG G + + T V Sbjct: 64 PTSSGEGEASERGRSRQAAQRAARR-ARRRAERRAQRRSFGPGGLLATPLFLPETRLVAP 122 Query: 293 PDTMRRLFTG 322 PD R L +G Sbjct: 123 PDITRDLLSG 132
>CGL_HUMAN (P32929) Cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) Length = 405 Score = 30.0 bits (66), Expect = 3.2 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = +2 Query: 356 YSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSV 469 YSR NPT L + +AAL+G + ASG++A ++ Sbjct: 60 YSRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVTI 97
>ATR_KLULA (Q6CT34) Serine/threonine-protein kinase MEC1 (EC 2.7.11.1)| (DNA-damage checkpoint kinase MEC1) (Mitosis entry checkpoint protein 1) (ATR homolog) Length = 2287 Score = 30.0 bits (66), Expect = 3.2 Identities = 29/107 (27%), Positives = 41/107 (38%), Gaps = 2/107 (1%) Frame = +2 Query: 137 GDDNGSTEEKALKARRRESDPAAALAAARHEFGEHGGVNMSIEASATFTVMEPDTMRRLF 316 G+D EEK LK R S A+A +H F SIE T + R+ + Sbjct: 661 GNDKSLVEEKKLKLLDRNSRQIFAVALVKHGF-------FSIETIQTLFLNTAPKFRKNY 713 Query: 317 TGELGPERGDLYIYSRHFNPTVLALGRQMAALEG--TEAAYCTASGM 451 LY+ VL + +Q+ L+G TE C S + Sbjct: 714 I--------TLYLPDYKTLAEVLKMSKQILTLDGQITETERCVLSSL 752
>CGL_CAEEL (P55216) Putative cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) Length = 392 Score = 30.0 bits (66), Expect = 3.2 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = +2 Query: 356 YSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSVL 472 YSR NPT L + +AALE + +SG++A S+++ Sbjct: 49 YSRAGNPTRDVLQKNLAALEDAKHCQVFSSGLAATSAII 87
>FTHS_STAAW (Q8NW37) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 555 Score = 29.6 bits (65), Expect = 4.1 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 131 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 250 GFG D G+ + +KAR DPAA + A HGGV Sbjct: 300 GFGSDLGAEKFMDIKAREAGFDPAAVVVVATIRALKMHGGV 340
>FTHS_STAAS (Q6G8J5) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 555 Score = 29.6 bits (65), Expect = 4.1 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 131 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 250 GFG D G+ + +KAR DPAA + A HGGV Sbjct: 300 GFGSDLGAEKFMDIKAREAGFDPAAVVVVATIRALKMHGGV 340
>FTHS_STAAR (Q6GFX6) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 555 Score = 29.6 bits (65), Expect = 4.1 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 131 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 250 GFG D G+ + +KAR DPAA + A HGGV Sbjct: 300 GFGSDLGAEKFMDIKAREAGFDPAAVVVVATIRALKMHGGV 340
>LEU3_SYMTH (Q67JY2) 3-isopropylmalate dehydrogenase (EC 1.1.1.85) (Beta-IPM| dehydrogenase) (IMDH) (3-IPM-DH) Length = 368 Score = 29.3 bits (64), Expect = 5.4 Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 5/79 (6%) Frame = +2 Query: 53 PTVPMAHVLAAAEPLTLLKRPTP-----QNDGFGDDNGSTEEKALKARRRESDPAAALAA 217 P V + H+LA + +L+RP ++ FGD ++E A+ P+A+L A Sbjct: 218 PDVEVEHLLADNAAMQILRRPGDFDVMLASNLFGDF--LSDEAAMLTGSIGLLPSASLGA 275 Query: 218 ARHEFGEHGGVNMSIEASA 274 AR+ FG G I SA Sbjct: 276 ARNRFGLPKGFYEPIHGSA 294
>SEMG1_HUMAN (P04279) Semenogelin-1 precursor (Semenogelin I) (SGI) [Contains:| Alpha-inhibin-92; Alpha-inhibin-31; Seminal basic protein] Length = 462 Score = 29.3 bits (64), Expect = 5.4 Identities = 19/83 (22%), Positives = 36/83 (43%) Frame = +2 Query: 104 LKRPTPQNDGFGDDNGSTEEKALKARRRESDPAAALAAARHEFGEHGGVNMSIEASATFT 283 ++ P P+ + + +N E ++ RE D + RH+ G HGG+++ I Sbjct: 388 IQAPNPKQEPWHGENAKGESG--QSTNREQDLLSHEQKGRHQHGSHGGLDIVI------- 438 Query: 284 VMEPDTMRRLFTGELGPERGDLY 352 + + D R L +R L+ Sbjct: 439 IEQEDDSDRHLAQHLNNDRNPLF 461
>ACON_MYCAV (O08451) Aconitate hydratase (EC 4.2.1.3) (Citrate hydro-lyase)| (Aconitase) Length = 961 Score = 28.9 bits (63), Expect = 7.1 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 1/98 (1%) Frame = +2 Query: 113 PTPQNDGFGDDNGSTEEKALKARRRESDPAAALAAARHEFG-EHGGVNMSIEASATFTVM 289 P ++G DD + + A A R S+P + EF +HG V ++ S T T Sbjct: 445 PGAPSNGHADDLPAVQSAAAHANGRPSNPVTVRSDELGEFVLDHGAVVIAAVTSCTNT-S 503 Query: 290 EPDTMRRLFTGELGPERGDLYIYSRHFNPTVLALGRQM 403 P+ M L L +R + + S+ + T +A G Q+ Sbjct: 504 NPEVM--LGAALLARQRVEKGLASKPWVKTTMAPGSQV 539
>METB_HAEIN (P44502) Cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) Length = 369 Score = 28.9 bits (63), Expect = 7.1 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +2 Query: 320 GELGPERGDLYIYSRHFNPTVLALGRQMAALEGTEAAYCTASGMSAISSVL 472 G G + Y+R NPT L +A LE + + +SGM+AI ++ Sbjct: 36 GHCGIGESTGFDYTRTKNPTRTVLEETIAKLENGDRGFAFSSGMAAIQVLM 86
>RS16_RHILO (Q98E70) 30S ribosomal protein S16| Length = 133 Score = 28.9 bits (63), Expect = 7.1 Identities = 18/62 (29%), Positives = 27/62 (43%) Frame = +2 Query: 35 KHPVIRPTVPMAHVLAAAEPLTLLKRPTPQNDGFGDDNGSTEEKALKARRRESDPAAALA 214 KH + P VL + L KR N + +E+A ++ + D AAA+A Sbjct: 59 KHWLSHGAQPTDRVLRFLDEAGLAKRDARSNPKKAEPGKKAQERAALLKKAQEDAAAAVA 118 Query: 215 AA 220 AA Sbjct: 119 AA 120
>RS16_RHIME (Q92L43) 30S ribosomal protein S16| Length = 124 Score = 28.5 bits (62), Expect = 9.2 Identities = 16/65 (24%), Positives = 29/65 (44%) Frame = +2 Query: 35 KHPVIRPTVPMAHVLAAAEPLTLLKRPTPQNDGFGDDNGSTEEKALKARRRESDPAAALA 214 +H + + P V+ + L KRP N +E+A +A+++ + AAA + Sbjct: 60 QHWIAQGAQPTDRVMRFLDQAGLAKRPARNNPTKAQPGKKAQERAAEAKQKAEEAAAAAS 119 Query: 215 AARHE 229 A E Sbjct: 120 EAAAE 124
>CYSA_STRCO (Q59829) Putative cystathionine gamma-lyase (EC 4.4.1.1)| (Gamma-cystathionase) Length = 392 Score = 28.5 bits (62), Expect = 9.2 Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 4/45 (8%) Frame = +2 Query: 350 YIYSRHFNPTVLALGRQMAALEGT-EAAYCT---ASGMSAISSVL 472 Y Y R NPT L + LE EA T ASGM+AISSVL Sbjct: 61 YTYGRDENPTWTRLESAIGELEAPGEAGVETLVFASGMAAISSVL 105
>FTHS_STAES (Q8CNV9) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 555 Score = 28.5 bits (62), Expect = 9.2 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 131 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 250 GFG D G+ + +KAR DP+A + A HGGV Sbjct: 300 GFGSDLGAEKFMNIKAREAGFDPSAVVVVATIRALKMHGGV 340
>FTHS_STAEQ (Q5HNH4) Formate--tetrahydrofolate ligase (EC 6.3.4.3)| (Formyltetrahydrofolate synthetase) (FHS) (FTHFS) Length = 555 Score = 28.5 bits (62), Expect = 9.2 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +2 Query: 131 GFGDDNGSTEEKALKARRRESDPAAALAAAR-HEFGEHGGV 250 GFG D G+ + +KAR DP+A + A HGGV Sbjct: 300 GFGSDLGAEKFMNIKAREAGFDPSAVVVVATIRALKMHGGV 340 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 39,325,801 Number of Sequences: 219361 Number of extensions: 666722 Number of successful extensions: 2538 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 2477 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2532 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
