ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet70f02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_507529.1| PREDICTED Oryza sativa (japonica cultivar-group), P0585G03.37 mRNA Length = 2343 Score = 351 bits (177), Expect = 1e-93 Identities = 269/299 (89%), Gaps = 3/299 (1%) Strand = Plus / Plus Query: 10 cactaccccgcgccgaacccggcggtggccgcggcgcccaaggggcccaagaagccggcc 69 |||||||| |||||||||||||| ||| | ||||||||||||| |||||||| ||||| Sbjct: 1084 cactacccggcgccgaacccggccgtgtcgtcggcgcccaagggcgccaagaaggcggcc 1143 Query: 70 gcgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 129 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1144 acgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 1203 Query: 130 ccggtgtcggacgtcttcggcggcggcgcaccggactacaacgacgccgcggccgctaag 189 || ||||| |||||||||||||||||||| || |||||||||||||||||||| | ||| Sbjct: 1204 cccgtgtccgacgtcttcggcggcggcgcgccagactacaacgacgccgcggcagtcaag 1263 Query: 190 tccccccgcaaaatggacggagccaaggagagggaagactacaacgtggagcgagacgac 249 ||||||||||||||||| ||||| ||||| ||||| |||| |||||||||| ||||| Sbjct: 1264 tccccccgcaaaatggatggagcgaaggacagggaggact---acgtggagcgggacgat 1320 Query: 250 ttcagcttcgggaacaggggcgcgctggacagggacgcggaggccggcgacgagaaggc 308 |||||||||||||||||||||| ||||||||||||||||||| || ||||||||||| Sbjct: 1321 ttcagcttcgggaacaggggcgtcatggacagggacgcggaggcaggggacgagaaggc 1379 Score = 206 bits (104), Expect = 5e-50 Identities = 128/135 (94%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 340 gcggggccgacggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtg 399 |||| ||||||||||||||||||||||||||||||||| || || ||||||||||||||| Sbjct: 1417 gcggcgccgacggcgatgccgccgacgagcgtgatgacccgcctcatcctgatcatggtg 1476 Query: 400 tggcgcaagctcatccgcaaccc-nacacctactccagcctcatcggcctcatctggtcg 458 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1477 tggcgcaagctcatccgcaacccgaacacctactccagcctcatcggcctcatctggtcc 1536 Query: 459 ctcgtctgcttcagg 473 ||||||||||||||| Sbjct: 1537 ctcgtctgcttcagg 1551
>ref|XM_506965.2| PREDICTED Oryza sativa (japonica cultivar-group), P0585G03.37 mRNA Length = 2401 Score = 351 bits (177), Expect = 1e-93 Identities = 269/299 (89%), Gaps = 3/299 (1%) Strand = Plus / Plus Query: 10 cactaccccgcgccgaacccggcggtggccgcggcgcccaaggggcccaagaagccggcc 69 |||||||| |||||||||||||| ||| | ||||||||||||| |||||||| ||||| Sbjct: 1083 cactacccggcgccgaacccggccgtgtcgtcggcgcccaagggcgccaagaaggcggcc 1142 Query: 70 gcgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 129 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1143 acgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 1202 Query: 130 ccggtgtcggacgtcttcggcggcggcgcaccggactacaacgacgccgcggccgctaag 189 || ||||| |||||||||||||||||||| || |||||||||||||||||||| | ||| Sbjct: 1203 cccgtgtccgacgtcttcggcggcggcgcgccagactacaacgacgccgcggcagtcaag 1262 Query: 190 tccccccgcaaaatggacggagccaaggagagggaagactacaacgtggagcgagacgac 249 ||||||||||||||||| ||||| ||||| ||||| |||| |||||||||| ||||| Sbjct: 1263 tccccccgcaaaatggatggagcgaaggacagggaggact---acgtggagcgggacgat 1319 Query: 250 ttcagcttcgggaacaggggcgcgctggacagggacgcggaggccggcgacgagaaggc 308 |||||||||||||||||||||| ||||||||||||||||||| || ||||||||||| Sbjct: 1320 ttcagcttcgggaacaggggcgtcatggacagggacgcggaggcaggggacgagaaggc 1378 Score = 206 bits (104), Expect = 5e-50 Identities = 128/135 (94%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 340 gcggggccgacggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtg 399 |||| ||||||||||||||||||||||||||||||||| || || ||||||||||||||| Sbjct: 1416 gcggcgccgacggcgatgccgccgacgagcgtgatgacccgcctcatcctgatcatggtg 1475 Query: 400 tggcgcaagctcatccgcaaccc-nacacctactccagcctcatcggcctcatctggtcg 458 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1476 tggcgcaagctcatccgcaacccgaacacctactccagcctcatcggcctcatctggtcc 1535 Query: 459 ctcgtctgcttcagg 473 ||||||||||||||| Sbjct: 1536 ctcgtctgcttcagg 1550
>dbj|AK102343.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033091B16, full insert sequence Length = 2402 Score = 351 bits (177), Expect = 1e-93 Identities = 269/299 (89%), Gaps = 3/299 (1%) Strand = Plus / Plus Query: 10 cactaccccgcgccgaacccggcggtggccgcggcgcccaaggggcccaagaagccggcc 69 |||||||| |||||||||||||| ||| | ||||||||||||| |||||||| ||||| Sbjct: 1084 cactacccggcgccgaacccggccgtgtcgtcggcgcccaagggcgccaagaaggcggcc 1143 Query: 70 gcgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 129 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1144 acgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 1203 Query: 130 ccggtgtcggacgtcttcggcggcggcgcaccggactacaacgacgccgcggccgctaag 189 || ||||| |||||||||||||||||||| || |||||||||||||||||||| | ||| Sbjct: 1204 cccgtgtccgacgtcttcggcggcggcgcgccagactacaacgacgccgcggcagtcaag 1263 Query: 190 tccccccgcaaaatggacggagccaaggagagggaagactacaacgtggagcgagacgac 249 ||||||||||||||||| ||||| ||||| ||||| |||| |||||||||| ||||| Sbjct: 1264 tccccccgcaaaatggatggagcgaaggacagggaggact---acgtggagcgggacgat 1320 Query: 250 ttcagcttcgggaacaggggcgcgctggacagggacgcggaggccggcgacgagaaggc 308 |||||||||||||||||||||| ||||||||||||||||||| || ||||||||||| Sbjct: 1321 ttcagcttcgggaacaggggcgtcatggacagggacgcggaggcaggggacgagaaggc 1379 Score = 206 bits (104), Expect = 5e-50 Identities = 128/135 (94%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 340 gcggggccgacggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtg 399 |||| ||||||||||||||||||||||||||||||||| || || ||||||||||||||| Sbjct: 1417 gcggcgccgacggcgatgccgccgacgagcgtgatgacccgcctcatcctgatcatggtg 1476 Query: 400 tggcgcaagctcatccgcaaccc-nacacctactccagcctcatcggcctcatctggtcg 458 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1477 tggcgcaagctcatccgcaacccgaacacctactccagcctcatcggcctcatctggtcc 1536 Query: 459 ctcgtctgcttcagg 473 ||||||||||||||| Sbjct: 1537 ctcgtctgcttcagg 1551
>dbj|AK099634.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059F15, full insert sequence Length = 2343 Score = 351 bits (177), Expect = 1e-93 Identities = 269/299 (89%), Gaps = 3/299 (1%) Strand = Plus / Plus Query: 10 cactaccccgcgccgaacccggcggtggccgcggcgcccaaggggcccaagaagccggcc 69 |||||||| |||||||||||||| ||| | ||||||||||||| |||||||| ||||| Sbjct: 1084 cactacccggcgccgaacccggccgtgtcgtcggcgcccaagggcgccaagaaggcggcc 1143 Query: 70 gcgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 129 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1144 acgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 1203 Query: 130 ccggtgtcggacgtcttcggcggcggcgcaccggactacaacgacgccgcggccgctaag 189 || ||||| |||||||||||||||||||| || |||||||||||||||||||| | ||| Sbjct: 1204 cccgtgtccgacgtcttcggcggcggcgcgccagactacaacgacgccgcggcagtcaag 1263 Query: 190 tccccccgcaaaatggacggagccaaggagagggaagactacaacgtggagcgagacgac 249 ||||||||||||||||| ||||| ||||| ||||| |||| |||||||||| ||||| Sbjct: 1264 tccccccgcaaaatggatggagcgaaggacagggaggact---acgtggagcgggacgat 1320 Query: 250 ttcagcttcgggaacaggggcgcgctggacagggacgcggaggccggcgacgagaaggc 308 |||||||||||||||||||||| ||||||||||||||||||| || ||||||||||| Sbjct: 1321 ttcagcttcgggaacaggggcgtcatggacagggacgcggaggcaggggacgagaaggc 1379 Score = 206 bits (104), Expect = 5e-50 Identities = 128/135 (94%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 340 gcggggccgacggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtg 399 |||| ||||||||||||||||||||||||||||||||| || || ||||||||||||||| Sbjct: 1417 gcggcgccgacggcgatgccgccgacgagcgtgatgacccgcctcatcctgatcatggtg 1476 Query: 400 tggcgcaagctcatccgcaaccc-nacacctactccagcctcatcggcctcatctggtcg 458 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1477 tggcgcaagctcatccgcaacccgaacacctactccagcctcatcggcctcatctggtcc 1536 Query: 459 ctcgtctgcttcagg 473 ||||||||||||||| Sbjct: 1537 ctcgtctgcttcagg 1551
>gb|AF056027.1|AF056027 Oryza sativa auxin transport protein REH1 (REH1) mRNA, complete cds Length = 2358 Score = 351 bits (177), Expect = 1e-93 Identities = 269/299 (89%), Gaps = 3/299 (1%) Strand = Plus / Plus Query: 10 cactaccccgcgccgaacccggcggtggccgcggcgcccaaggggcccaagaagccggcc 69 |||||||| |||||||||||||| ||| | ||||||||||||| |||||||| ||||| Sbjct: 1085 cactacccggcgccgaacccggccgtgtcgtcggcgcccaagggcgccaagaaggcggcc 1144 Query: 70 gcgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 129 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1145 acgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 1204 Query: 130 ccggtgtcggacgtcttcggcggcggcgcaccggactacaacgacgccgcggccgctaag 189 || ||||| |||||||||||||||||||| || |||||||||||||||||||| | ||| Sbjct: 1205 cccgtgtccgacgtcttcggcggcggcgcgccagactacaacgacgccgcggcagtcaag 1264 Query: 190 tccccccgcaaaatggacggagccaaggagagggaagactacaacgtggagcgagacgac 249 ||||||||||||||||| ||||| ||||| ||||| |||| |||||||||| ||||| Sbjct: 1265 tccccccgcaaaatggatggagcgaaggacagggaggact---acgtggagcgggacgat 1321 Query: 250 ttcagcttcgggaacaggggcgcgctggacagggacgcggaggccggcgacgagaaggc 308 |||||||||||||||||||||| ||||||||||||||||||| || ||||||||||| Sbjct: 1322 ttcagcttcgggaacaggggcgtcatggacagggacgcggaggcaggggacgagaaggc 1380 Score = 206 bits (104), Expect = 5e-50 Identities = 128/135 (94%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 340 gcggggccgacggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtg 399 |||| ||||||||||||||||||||||||||||||||| || || ||||||||||||||| Sbjct: 1418 gcggcgccgacggcgatgccgccgacgagcgtgatgacccgcctcatcctgatcatggtg 1477 Query: 400 tggcgcaagctcatccgcaaccc-nacacctactccagcctcatcggcctcatctggtcg 458 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1478 tggcgcaagctcatccgcaacccgaacacctactccagcctcatcggcctcatctggtcc 1537 Query: 459 ctcgtctgcttcagg 473 ||||||||||||||| Sbjct: 1538 ctcgtctgcttcagg 1552
>ref|XM_467740.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1845 Score = 256 bits (129), Expect = 6e-65 Identities = 177/193 (91%) Strand = Plus / Plus Query: 10 cactaccccgcgccgaacccggcggtggccgcggcgcccaaggggcccaagaagccggcc 69 |||||||| |||||||||||||| ||| | ||||||||||||| |||||||| ||||| Sbjct: 895 cactacccggcgccgaacccggccgtgtcgtcggcgcccaagggcgccaagaaggcggcc 954 Query: 70 gcgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 129 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 955 acgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 1014 Query: 130 ccggtgtcggacgtcttcggcggcggcgcaccggactacaacgacgccgcggccgctaag 189 || ||||| |||||||||||||||||||| || |||||||||||||||||||| | ||| Sbjct: 1015 cccgtgtccgacgtcttcggcggcggcgcgccagactacaacgacgccgcggcagtcaag 1074 Query: 190 tccccccgcaaaa 202 ||||||||||||| Sbjct: 1075 tccccccgcaaaa 1087 Score = 206 bits (104), Expect = 5e-50 Identities = 128/135 (94%), Gaps = 1/135 (0%) Strand = Plus / Plus Query: 340 gcggggccgacggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtg 399 |||| ||||||||||||||||||||||||||||||||| || || ||||||||||||||| Sbjct: 1324 gcggcgccgacggcgatgccgccgacgagcgtgatgacccgcctcatcctgatcatggtg 1383 Query: 400 tggcgcaagctcatccgcaaccc-nacacctactccagcctcatcggcctcatctggtcg 458 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 1384 tggcgcaagctcatccgcaacccgaacacctactccagcctcatcggcctcatctggtcc 1443 Query: 459 ctcgtctgcttcagg 473 ||||||||||||||| Sbjct: 1444 ctcgtctgcttcagg 1458 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Plus Query: 233 acgtggagcgagacgacttcagcttcgggaacaggggcgcgctggacagggacgcggagg 292 |||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 1211 acgtggagcgggacgatttcagcttcgggaacaggggcgtcatggacagggacgcggagg 1270 Query: 293 ccggcgacgagaaggc 308 | || ||||||||||| Sbjct: 1271 caggggacgagaaggc 1286
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 256 bits (129), Expect = 6e-65 Identities = 177/193 (91%) Strand = Plus / Minus Query: 10 cactaccccgcgccgaacccggcggtggccgcggcgcccaaggggcccaagaagccggcc 69 |||||||| |||||||||||||| ||| | ||||||||||||| |||||||| ||||| Sbjct: 31179409 cactacccggcgccgaacccggccgtgtcgtcggcgcccaagggcgccaagaaggcggcc 31179350 Query: 70 gcgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 129 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 31179349 acgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 31179290 Query: 130 ccggtgtcggacgtcttcggcggcggcgcaccggactacaacgacgccgcggccgctaag 189 || ||||| |||||||||||||||||||| || |||||||||||||||||||| | ||| Sbjct: 31179289 cccgtgtccgacgtcttcggcggcggcgcgccagactacaacgacgccgcggcagtcaag 31179230 Query: 190 tccccccgcaaaa 202 ||||||||||||| Sbjct: 31179229 tccccccgcaaaa 31179217 Score = 206 bits (104), Expect = 5e-50 Identities = 128/135 (94%), Gaps = 1/135 (0%) Strand = Plus / Minus Query: 340 gcggggccgacggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtg 399 |||| ||||||||||||||||||||||||||||||||| || || ||||||||||||||| Sbjct: 31178980 gcggcgccgacggcgatgccgccgacgagcgtgatgacccgcctcatcctgatcatggtg 31178921 Query: 400 tggcgcaagctcatccgcaaccc-nacacctactccagcctcatcggcctcatctggtcg 458 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 31178920 tggcgcaagctcatccgcaacccgaacacctactccagcctcatcggcctcatctggtcc 31178861 Query: 459 ctcgtctgcttcagg 473 ||||||||||||||| Sbjct: 31178860 ctcgtctgcttcagg 31178846 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 233 acgtggagcgagacgacttcagcttcgggaacaggggcgcgctggacagggacgcggagg 292 |||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 31179093 acgtggagcgggacgatttcagcttcgggaacaggggcgtcatggacagggacgcggagg 31179034 Query: 293 ccggcgacgagaaggc 308 | || ||||||||||| Sbjct: 31179033 caggggacgagaaggc 31179018 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 acaacgacgccgcggccgct 186 |||||||||||||||||||| Sbjct: 25206840 acaacgacgccgcggccgct 25206859
>dbj|AP005297.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1734_E02 Length = 168566 Score = 256 bits (129), Expect = 6e-65 Identities = 177/193 (91%) Strand = Plus / Minus Query: 10 cactaccccgcgccgaacccggcggtggccgcggcgcccaaggggcccaagaagccggcc 69 |||||||| |||||||||||||| ||| | ||||||||||||| |||||||| ||||| Sbjct: 59252 cactacccggcgccgaacccggccgtgtcgtcggcgcccaagggcgccaagaaggcggcc 59193 Query: 70 gcgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 129 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 59192 acgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 59133 Query: 130 ccggtgtcggacgtcttcggcggcggcgcaccggactacaacgacgccgcggccgctaag 189 || ||||| |||||||||||||||||||| || |||||||||||||||||||| | ||| Sbjct: 59132 cccgtgtccgacgtcttcggcggcggcgcgccagactacaacgacgccgcggcagtcaag 59073 Query: 190 tccccccgcaaaa 202 ||||||||||||| Sbjct: 59072 tccccccgcaaaa 59060 Score = 206 bits (104), Expect = 5e-50 Identities = 128/135 (94%), Gaps = 1/135 (0%) Strand = Plus / Minus Query: 340 gcggggccgacggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtg 399 |||| ||||||||||||||||||||||||||||||||| || || ||||||||||||||| Sbjct: 58823 gcggcgccgacggcgatgccgccgacgagcgtgatgacccgcctcatcctgatcatggtg 58764 Query: 400 tggcgcaagctcatccgcaaccc-nacacctactccagcctcatcggcctcatctggtcg 458 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 58763 tggcgcaagctcatccgcaacccgaacacctactccagcctcatcggcctcatctggtcc 58704 Query: 459 ctcgtctgcttcagg 473 ||||||||||||||| Sbjct: 58703 ctcgtctgcttcagg 58689 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 233 acgtggagcgagacgacttcagcttcgggaacaggggcgcgctggacagggacgcggagg 292 |||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 58936 acgtggagcgggacgatttcagcttcgggaacaggggcgtcatggacagggacgcggagg 58877 Query: 293 ccggcgacgagaaggc 308 | || ||||||||||| Sbjct: 58876 caggggacgagaaggc 58861
>dbj|AP004800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0585G03 Length = 173649 Score = 256 bits (129), Expect = 6e-65 Identities = 177/193 (91%) Strand = Plus / Minus Query: 10 cactaccccgcgccgaacccggcggtggccgcggcgcccaaggggcccaagaagccggcc 69 |||||||| |||||||||||||| ||| | ||||||||||||| |||||||| ||||| Sbjct: 168633 cactacccggcgccgaacccggccgtgtcgtcggcgcccaagggcgccaagaaggcggcc 168574 Query: 70 gcgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 129 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168573 acgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 168514 Query: 130 ccggtgtcggacgtcttcggcggcggcgcaccggactacaacgacgccgcggccgctaag 189 || ||||| |||||||||||||||||||| || |||||||||||||||||||| | ||| Sbjct: 168513 cccgtgtccgacgtcttcggcggcggcgcgccagactacaacgacgccgcggcagtcaag 168454 Query: 190 tccccccgcaaaa 202 ||||||||||||| Sbjct: 168453 tccccccgcaaaa 168441 Score = 206 bits (104), Expect = 5e-50 Identities = 128/135 (94%), Gaps = 1/135 (0%) Strand = Plus / Minus Query: 340 gcggggccgacggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtg 399 |||| ||||||||||||||||||||||||||||||||| || || ||||||||||||||| Sbjct: 168204 gcggcgccgacggcgatgccgccgacgagcgtgatgacccgcctcatcctgatcatggtg 168145 Query: 400 tggcgcaagctcatccgcaaccc-nacacctactccagcctcatcggcctcatctggtcg 458 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 168144 tggcgcaagctcatccgcaacccgaacacctactccagcctcatcggcctcatctggtcc 168085 Query: 459 ctcgtctgcttcagg 473 ||||||||||||||| Sbjct: 168084 ctcgtctgcttcagg 168070 Score = 95.6 bits (48), Expect = 1e-16 Identities = 69/76 (90%) Strand = Plus / Minus Query: 233 acgtggagcgagacgacttcagcttcgggaacaggggcgcgctggacagggacgcggagg 292 |||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 168317 acgtggagcgggacgatttcagcttcgggaacaggggcgtcatggacagggacgcggagg 168258 Query: 293 ccggcgacgagaaggc 308 | || ||||||||||| Sbjct: 168257 caggggacgagaaggc 168242
>gb|AY106004.1| Zea mays PCO072074 mRNA sequence Length = 1426 Score = 246 bits (124), Expect = 6e-62 Identities = 154/164 (93%) Strand = Plus / Plus Query: 10 cactaccccgcgccgaacccggcggtggccgcggcgcccaaggggcccaagaagccggcc 69 ||||||||||||||||||||||| |||||||||||||||||||| ||| |||| |||| Sbjct: 1259 cactaccccgcgccgaacccggccgtggccgcggcgcccaagggcgccaggaaggcggcg 1318 Query: 70 gcgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 129 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1319 acgaacgggcaggccaagggcgaggacctccacatgttcgtctggagctccagcgcgtcg 1378 Query: 130 ccggtgtcggacgtcttcggcggcggcgcaccggactacaacga 173 || |||||||||||||||||||| ||||| |||||||||||||| Sbjct: 1379 cccgtgtcggacgtcttcggcggtggcgccccggactacaacga 1422
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 222 bits (112), Expect = 8e-55 Identities = 124/127 (97%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 345 gccgacggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcg 404 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 6878710 gccgacggcgatgccgccgacgagcgtgatgacgcggctcatcctgatcatggtgtggcg 6878769 Query: 405 caagctcatccgcaa-cccnacacctactccagcctcatcggcctcatctggtcgctcgt 463 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 6878770 caagctcatccgcaaccccaacacctactccagcctcatcggcctcatctggtcgctcgt 6878829 Query: 464 ctgcttc 470 ||||||| Sbjct: 6878830 ctgcttc 6878836 Score = 165 bits (83), Expect = 2e-37 Identities = 113/122 (92%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 353 cgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctca 412 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 26818797 cgatgccgccgacgagcgtgatgacgcggctcatcctcatcatggtgtggcgcaagctca 26818856 Query: 413 tccgcaa-cccnacacctactccagcctcatcggcctcatctggtcgctcgtctgcttca 471 || | || ||| |||||||||||||||||||||||||| ||||||| ||||||| ||||| Sbjct: 26818857 tcagaaaccccaacacctactccagcctcatcggcctcgtctggtccctcgtctccttca 26818916 Query: 472 gg 473 || Sbjct: 26818917 gg 26818918 Score = 97.6 bits (49), Expect = 3e-17 Identities = 81/91 (89%), Gaps = 3/91 (3%) Strand = Plus / Plus Query: 94 gacctccacatgttcgtctggagctccagcgcgtcgccggtgtcggacgtcttcggcggc 153 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| | Sbjct: 6878349 gacctccacatgttcgtctggagctccagcgcgtcgcccgtgtccgacgtcttcggcaac 6878408 Query: 154 ggcgcaccggactacaacgacgccgcggccg 184 ||||| || |||||||||||||| |||| Sbjct: 6878409 ggcgcc---gagtacaacgacgccgccgccg 6878436 Score = 95.6 bits (48), Expect = 1e-16 Identities = 126/152 (82%), Gaps = 15/152 (9%) Strand = Plus / Plus Query: 8 ggcactaccccgcgccgaacccggcggtggccgcggcgcccaaggggcccaagaagccgg 67 |||| ||||| ||||| |||||||| |||| ||| |||||||| ||||||||| ||| Sbjct: 6878260 ggcagtacccggcgcccaacccggccatggcggcgccgcccaag---cccaagaaggcgg 6878316 Query: 68 ccgcgaacgggcaggccaagggcgag---------gacctccacatgttcgtctggagct 118 || ||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 6878317 cc---aacggccaggccaagggcgaggacggcaaagacctccacatgttcgtctggagct 6878373 Query: 119 ccagcgcgtcgccggtgtcggacgtcttcggc 150 ||||||||||||| ||||| |||||||||||| Sbjct: 6878374 ccagcgcgtcgcccgtgtccgacgtcttcggc 6878405 Score = 75.8 bits (38), Expect = 1e-10 Identities = 67/74 (90%), Gaps = 2/74 (2%) Strand = Plus / Plus Query: 234 cgtggagcgagacgacttcagcttcgggaacaggggcg-cgctggacagggacgcggagg 292 ||||||| | ||||||||||||||||||||||| |||| ||| | | ||||||||||||| Sbjct: 6878584 cgtggagagggacgacttcagcttcgggaacagaggcgtcgccg-agagggacgcggagg 6878642 Query: 293 ccggcgacgagaag 306 |||||||||||||| Sbjct: 6878643 ccggcgacgagaag 6878656 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 100 cacatgttcgtctggagctccagcgcgtcgccggtgtcgga 140 ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 26818387 cacatgttcgtgtggagctctagcgcgtcgccggtgtcgga 26818427
>dbj|AP005522.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0479H10 Length = 139874 Score = 222 bits (112), Expect = 8e-55 Identities = 124/127 (97%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 345 gccgacggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcg 404 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 68235 gccgacggcgatgccgccgacgagcgtgatgacgcggctcatcctgatcatggtgtggcg 68294 Query: 405 caagctcatccgcaa-cccnacacctactccagcctcatcggcctcatctggtcgctcgt 463 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 68295 caagctcatccgcaaccccaacacctactccagcctcatcggcctcatctggtcgctcgt 68354 Query: 464 ctgcttc 470 ||||||| Sbjct: 68355 ctgcttc 68361 Score = 97.6 bits (49), Expect = 3e-17 Identities = 81/91 (89%), Gaps = 3/91 (3%) Strand = Plus / Plus Query: 94 gacctccacatgttcgtctggagctccagcgcgtcgccggtgtcggacgtcttcggcggc 153 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| | Sbjct: 67874 gacctccacatgttcgtctggagctccagcgcgtcgcccgtgtccgacgtcttcggcaac 67933 Query: 154 ggcgcaccggactacaacgacgccgcggccg 184 ||||| || |||||||||||||| |||| Sbjct: 67934 ggcgcc---gagtacaacgacgccgccgccg 67961 Score = 95.6 bits (48), Expect = 1e-16 Identities = 126/152 (82%), Gaps = 15/152 (9%) Strand = Plus / Plus Query: 8 ggcactaccccgcgccgaacccggcggtggccgcggcgcccaaggggcccaagaagccgg 67 |||| ||||| ||||| |||||||| |||| ||| |||||||| ||||||||| ||| Sbjct: 67785 ggcagtacccggcgcccaacccggccatggcggcgccgcccaag---cccaagaaggcgg 67841 Query: 68 ccgcgaacgggcaggccaagggcgag---------gacctccacatgttcgtctggagct 118 || ||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 67842 cc---aacggccaggccaagggcgaggacggcaaagacctccacatgttcgtctggagct 67898 Query: 119 ccagcgcgtcgccggtgtcggacgtcttcggc 150 ||||||||||||| ||||| |||||||||||| Sbjct: 67899 ccagcgcgtcgcccgtgtccgacgtcttcggc 67930 Score = 75.8 bits (38), Expect = 1e-10 Identities = 67/74 (90%), Gaps = 2/74 (2%) Strand = Plus / Plus Query: 234 cgtggagcgagacgacttcagcttcgggaacaggggcg-cgctggacagggacgcggagg 292 ||||||| | ||||||||||||||||||||||| |||| ||| | | ||||||||||||| Sbjct: 68109 cgtggagagggacgacttcagcttcgggaacagaggcgtcgccg-agagggacgcggagg 68167 Query: 293 ccggcgacgagaag 306 |||||||||||||| Sbjct: 68168 ccggcgacgagaag 68181
>dbj|AK103208.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033122I23, full insert sequence Length = 2470 Score = 222 bits (112), Expect = 8e-55 Identities = 124/127 (97%), Gaps = 1/127 (0%) Strand = Plus / Plus Query: 345 gccgacggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcg 404 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1401 gccgacggcgatgccgccgacgagcgtgatgacgcggctcatcctgatcatggtgtggcg 1460 Query: 405 caagctcatccgcaa-cccnacacctactccagcctcatcggcctcatctggtcgctcgt 463 ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1461 caagctcatccgcaaccccaacacctactccagcctcatcggcctcatctggtcgctcgt 1520 Query: 464 ctgcttc 470 ||||||| Sbjct: 1521 ctgcttc 1527 Score = 97.6 bits (49), Expect = 3e-17 Identities = 81/91 (89%), Gaps = 3/91 (3%) Strand = Plus / Plus Query: 94 gacctccacatgttcgtctggagctccagcgcgtcgccggtgtcggacgtcttcggcggc 153 |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| | Sbjct: 1141 gacctccacatgttcgtctggagctccagcgcgtcgcccgtgtccgacgtcttcggcaac 1200 Query: 154 ggcgcaccggactacaacgacgccgcggccg 184 ||||| || |||||||||||||| |||| Sbjct: 1201 ggcgcc---gagtacaacgacgccgccgccg 1228 Score = 95.6 bits (48), Expect = 1e-16 Identities = 126/152 (82%), Gaps = 15/152 (9%) Strand = Plus / Plus Query: 8 ggcactaccccgcgccgaacccggcggtggccgcggcgcccaaggggcccaagaagccgg 67 |||| ||||| ||||| |||||||| |||| ||| |||||||| ||||||||| ||| Sbjct: 1052 ggcagtacccggcgcccaacccggccatggcggcgccgcccaag---cccaagaaggcgg 1108 Query: 68 ccgcgaacgggcaggccaagggcgag---------gacctccacatgttcgtctggagct 118 || ||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1109 cc---aacggccaggccaagggcgaggacggcaaagacctccacatgttcgtctggagct 1165 Query: 119 ccagcgcgtcgccggtgtcggacgtcttcggc 150 ||||||||||||| ||||| |||||||||||| Sbjct: 1166 ccagcgcgtcgcccgtgtccgacgtcttcggc 1197 Score = 75.8 bits (38), Expect = 1e-10 Identities = 67/74 (90%), Gaps = 2/74 (2%) Strand = Plus / Plus Query: 234 cgtggagcgagacgacttcagcttcgggaacaggggcg-cgctggacagggacgcggagg 292 ||||||| | ||||||||||||||||||||||| |||| ||| | | ||||||||||||| Sbjct: 1275 cgtggagagggacgacttcagcttcgggaacagaggcgtcgccg-agagggacgcggagg 1333 Query: 293 ccggcgacgagaag 306 |||||||||||||| Sbjct: 1334 ccggcgacgagaag 1347
>gb|AY108500.1| Zea mays PCO136059 mRNA sequence Length = 1188 Score = 196 bits (99), Expect = 5e-47 Identities = 124/130 (95%), Gaps = 2/130 (1%) Strand = Plus / Plus Query: 345 gccgacggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcg 404 ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 56 gccgacggcgatgccgccgacgagcgtcatgacccggctgatcctgatcatggtgtggcg 115 Query: 405 caagctcatccgcaaccc-nacacctactccagcctcatcggcctcatctggtcgctcgt 463 ||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||| Sbjct: 116 caa-ctcatccgcaacccaaacacctactccagcctcatcggcgtcatctggtcgctcgt 174 Query: 464 ctgcttcagg 473 |||||||||| Sbjct: 175 ctgcttcagg 184
>gb|AY496058.1| Triticum aestivum auxin transporter PIN1 mRNA, complete cds Length = 1764 Score = 168 bits (85), Expect = 1e-38 Identities = 121/132 (91%), Gaps = 1/132 (0%) Strand = Plus / Plus Query: 340 gcggggccgacggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtg 399 |||| ||| |||| |||||||||||| ||||||||||| || || ||||| ||||||||| Sbjct: 1243 gcggcgcccacggtgatgccgccgaccagcgtgatgacccgcctcatcctcatcatggtg 1302 Query: 400 tggcgcaagctcatccgcaa-cccnacacctactccagcctcatcggcctcatctggtcg 458 |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| Sbjct: 1303 tggcgcaagctcatccgcaaccccaacacctactccagcctcatcggcctcatctggtcc 1362 Query: 459 ctcgtctgcttc 470 |||||||||||| Sbjct: 1363 ctcgtctgcttc 1374 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 92 aggacctccacatgttcgtctggagctccagcgcgtcgccggtgtcggacgtcttcggc 150 ||||||| ||||||||||| |||||||||||||||||||| ||||| ||||| |||||| Sbjct: 1010 aggacctgcacatgttcgtgtggagctccagcgcgtcgcccgtgtccgacgtgttcggc 1068 Score = 60.0 bits (30), Expect = 7e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 280 agggacgcggaggccggcgacgagaaggcc 309 |||||||||||||||||||||||||||||| Sbjct: 1183 agggacgcggaggccggcgacgagaaggcc 1212 Score = 48.1 bits (24), Expect = 0.026 Identities = 30/32 (93%) Strand = Plus / Plus Query: 234 cgtggagcgagacgacttcagcttcgggaaca 265 ||||||||| ||||| |||||||||||||||| Sbjct: 1146 cgtggagcgtgacgagttcagcttcgggaaca 1177
>gb|BT008949.1| Triticum aestivum clone wdk1c.pk008.g12:fis, full insert mRNA sequence Length = 2293 Score = 165 bits (83), Expect = 2e-37 Identities = 113/122 (92%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 353 cgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctca 412 ||||||||||| ||||||||||||| ||||| ||||| |||||||||||||||||||||| Sbjct: 1464 cgatgccgccggcgagcgtgatgacccggctcatcctcatcatggtgtggcgcaagctca 1523 Query: 413 tccgcaa-cccnacacctactccagcctcatcggcctcatctggtcgctcgtctgcttca 471 ||||||| ||| |||||||||||||||||||||||||| ||||||| ||||||| ||||| Sbjct: 1524 tccgcaaccccaacacctactccagcctcatcggcctcgtctggtcactcgtctccttca 1583 Query: 472 gg 473 || Sbjct: 1584 gg 1585 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 100 cacatgttcgtctggagctccagcgcgtcgccggtgtcgga 140 ||||||||||| |||||||||||||||||||| |||||||| Sbjct: 1133 cacatgttcgtgtggagctccagcgcgtcgcccgtgtcgga 1173
>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0051O02 Length = 169532 Score = 165 bits (83), Expect = 2e-37 Identities = 113/122 (92%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 353 cgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctca 412 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 73423 cgatgccgccgacgagcgtgatgacgcggctcatcctcatcatggtgtggcgcaagctca 73482 Query: 413 tccgcaa-cccnacacctactccagcctcatcggcctcatctggtcgctcgtctgcttca 471 || | || ||| |||||||||||||||||||||||||| ||||||| ||||||| ||||| Sbjct: 73483 tcagaaaccccaacacctactccagcctcatcggcctcgtctggtccctcgtctccttca 73542 Query: 472 gg 473 || Sbjct: 73543 gg 73544 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 100 cacatgttcgtctggagctccagcgcgtcgccggtgtcgga 140 ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 73013 cacatgttcgtgtggagctctagcgcgtcgccggtgtcgga 73053
>dbj|AK101191.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030G03, full insert sequence Length = 2276 Score = 165 bits (83), Expect = 2e-37 Identities = 113/122 (92%), Gaps = 1/122 (0%) Strand = Plus / Plus Query: 353 cgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctca 412 ||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 1461 cgatgccgccgacgagcgtgatgacgcggctcatcctcatcatggtgtggcgcaagctca 1520 Query: 413 tccgcaa-cccnacacctactccagcctcatcggcctcatctggtcgctcgtctgcttca 471 || | || ||| |||||||||||||||||||||||||| ||||||| ||||||| ||||| Sbjct: 1521 tcagaaaccccaacacctactccagcctcatcggcctcgtctggtccctcgtctccttca 1580 Query: 472 gg 473 || Sbjct: 1581 gg 1582 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 100 cacatgttcgtctggagctccagcgcgtcgccggtgtcgga 140 ||||||||||| |||||||| |||||||||||||||||||| Sbjct: 1139 cacatgttcgtgtggagctctagcgcgtcgccggtgtcgga 1179
>ref|NM_192288.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1725 Score = 111 bits (56), Expect = 2e-21 Identities = 98/111 (88%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 ||||||||| ||||||||||||| || || ||||| || ||||||||||||||||||||| Sbjct: 1351 atgccgccggcgagcgtgatgacacgcctcatcctcataatggtgtggcgcaagctcatc 1410 Query: 415 cgcaa-cccnacacctactccagcctcatcggcctcatctggtcgctcgtc 464 ||||| ||| |||| |||||||||||| |||||||| |||||| |||||| Sbjct: 1411 cgcaaccccaacacttactccagcctcctcggcctcgcctggtccctcgtc 1461 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 92 aggacctccacatgttcgtctggagctccagcgcgtc 128 |||| |||||||||||||| |||||||| |||||||| Sbjct: 953 aggagctccacatgttcgtgtggagctcgagcgcgtc 989
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 111 bits (56), Expect = 2e-21 Identities = 98/111 (88%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 ||||||||| ||||||||||||| || || ||||| || ||||||||||||||||||||| Sbjct: 25859227 atgccgccggcgagcgtgatgacacgcctcatcctcataatggtgtggcgcaagctcatc 25859286 Query: 415 cgcaa-cccnacacctactccagcctcatcggcctcatctggtcgctcgtc 464 ||||| ||| |||| |||||||||||| |||||||| |||||| |||||| Sbjct: 25859287 cgcaaccccaacacttactccagcctcctcggcctcgcctggtccctcgtc 25859337 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 234 cgtggagcgagacgacttcagcttcgggaacaggggcg 271 ||||||||| |||||||||||||||||| |||| |||| Sbjct: 28826911 cgtggagcgggacgacttcagcttcgggtacagaggcg 28826874 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 92 aggacctccacatgttcgtctggagctccagcgcgtc 128 |||| |||||||||||||| |||||||| |||||||| Sbjct: 25858727 aggagctccacatgttcgtgtggagctcgagcgcgtc 25858763 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 tcggcctcatctggtcgctc 461 |||||||||||||||||||| Sbjct: 32702066 tcggcctcatctggtcgctc 32702047
>dbj|AP003725.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0510C12 Length = 177049 Score = 111 bits (56), Expect = 2e-21 Identities = 98/111 (88%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 ||||||||| ||||||||||||| || || ||||| || ||||||||||||||||||||| Sbjct: 99151 atgccgccggcgagcgtgatgacacgcctcatcctcataatggtgtggcgcaagctcatc 99210 Query: 415 cgcaa-cccnacacctactccagcctcatcggcctcatctggtcgctcgtc 464 ||||| ||| |||| |||||||||||| |||||||| |||||| |||||| Sbjct: 99211 cgcaaccccaacacttactccagcctcctcggcctcgcctggtccctcgtc 99261 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 92 aggacctccacatgttcgtctggagctccagcgcgtc 128 |||| |||||||||||||| |||||||| |||||||| Sbjct: 98651 aggagctccacatgttcgtgtggagctcgagcgcgtc 98687
>dbj|AK101504.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044E23, full insert sequence Length = 2457 Score = 111 bits (56), Expect = 2e-21 Identities = 98/111 (88%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 ||||||||| ||||||||||||| || || ||||| || ||||||||||||||||||||| Sbjct: 1702 atgccgccggcgagcgtgatgacacgcctcatcctcataatggtgtggcgcaagctcatc 1761 Query: 415 cgcaa-cccnacacctactccagcctcatcggcctcatctggtcgctcgtc 464 ||||| ||| |||| |||||||||||| |||||||| |||||| |||||| Sbjct: 1762 cgcaaccccaacacttactccagcctcctcggcctcgcctggtccctcgtc 1812 Score = 48.1 bits (24), Expect = 0.026 Identities = 33/36 (91%) Strand = Plus / Plus Query: 92 aggacctccacatgttcgtctggagctccagcgcgt 127 |||| |||||||||||||| |||||||| ||||||| Sbjct: 1304 aggagctccacatgttcgtgtggagctcgagcgcgt 1339
>dbj|AK063976.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-C02, full insert sequence Length = 2126 Score = 111 bits (56), Expect = 2e-21 Identities = 98/111 (88%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 ||||||||| ||||||||||||| || || ||||| || ||||||||||||||||||||| Sbjct: 1368 atgccgccggcgagcgtgatgacacgcctcatcctcataatggtgtggcgcaagctcatc 1427 Query: 415 cgcaa-cccnacacctactccagcctcatcggcctcatctggtcgctcgtc 464 ||||| ||| |||| |||||||||||| |||||||| |||||| |||||| Sbjct: 1428 cgcaaccccaacacttactccagcctcctcggcctcgcctggtccctcgtc 1478 Score = 50.1 bits (25), Expect = 0.007 Identities = 34/37 (91%) Strand = Plus / Plus Query: 92 aggacctccacatgttcgtctggagctccagcgcgtc 128 |||| |||||||||||||| |||||||| |||||||| Sbjct: 1060 aggagctccacatgttcgtgtggagctcgagcgcgtc 1096
>gb|AY110494.1| Zea mays CL464_-1 mRNA sequence Length = 2737 Score = 109 bits (55), Expect = 8e-21 Identities = 91/102 (89%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 357 gccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatccg 416 ||||||| ||||||||||||||||||| ||||| |||||||||||| | ||||| ||||| Sbjct: 1409 gccgccggcgagcgtgatgacgcggctcatcctcatcatggtgtggaggaagctgatccg 1468 Query: 417 caa-cccnacacctactccagcctcatcggcctcatctggtc 457 || ||| ||||||||||||||||||||||| || ||||||| Sbjct: 1469 gaaccccaacacctactccagcctcatcggcgtcgtctggtc 1510 Score = 60.0 bits (30), Expect = 7e-06 Identities = 42/46 (91%) Strand = Plus / Plus Query: 92 aggacctccacatgttcgtctggagctccagcgcgtcgccggtgtc 137 ||||||| |||||| ||||||||||||||||||| ||||| ||||| Sbjct: 1129 aggacctgcacatgctcgtctggagctccagcgcctcgcccgtgtc 1174
>gb|AC123528.2| Oryza sativa chromosome 11 clone OSJNBa0078E03, complete sequence Length = 149493 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/117 (85%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 350 cggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagc 409 |||||||||||||| |||||||||||||| |||| |||||||||||||| ||| | |||| Sbjct: 60704 cggcgatgccgccggcgagcgtgatgacgaggctcatcctgatcatggtttggaggaagc 60645 Query: 410 tcatccgcaa-cccnacacctactccagcctcatcggcctcatctggtcgctcgtct 465 | ||| | || ||| |||| |||||||||||| | || |||||||||| ||||||| Sbjct: 60644 tgatcaggaaccccaacacttactccagcctccttggtgtcatctggtccctcgtct 60588 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 92 aggacctccacatgttcgtctggagctccagcgcgtcgccggtgtcgga 140 ||||||| ||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 61349 aggacctgcacatgttcgtgtggagctcaagcgcctcgccggtgtcgga 61301
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/117 (85%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 350 cggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagc 409 |||||||||||||| |||||||||||||| |||| |||||||||||||| ||| | |||| Sbjct: 1705697 cggcgatgccgccggcgagcgtgatgacgaggctcatcctgatcatggtttggaggaagc 1705638 Query: 410 tcatccgcaa-cccnacacctactccagcctcatcggcctcatctggtcgctcgtct 465 | ||| | || ||| |||| |||||||||||| | || |||||||||| ||||||| Sbjct: 1705637 tgatcaggaaccccaacacttactccagcctccttggtgtcatctggtccctcgtct 1705581 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 92 aggacctccacatgttcgtctggagctccagcgcgtcgccggtgtcgga 140 ||||||| ||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 1706342 aggacctgcacatgttcgtgtggagctcaagcgcctcgccggtgtcgga 1706294
>dbj|AK103181.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121I24, full insert sequence Length = 2233 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/117 (85%), Gaps = 1/117 (0%) Strand = Plus / Plus Query: 350 cggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagc 409 |||||||||||||| |||||||||||||| |||| |||||||||||||| ||| | |||| Sbjct: 1375 cggcgatgccgccggcgagcgtgatgacgaggctcatcctgatcatggtttggaggaagc 1434 Query: 410 tcatccgcaa-cccnacacctactccagcctcatcggcctcatctggtcgctcgtct 465 | ||| | || ||| |||| |||||||||||| | || |||||||||| ||||||| Sbjct: 1435 tgatcaggaaccccaacacttactccagcctccttggtgtcatctggtccctcgtct 1491 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 92 aggacctccacatgttcgtctggagctccagcgcgtcgccggtgtcgga 140 ||||||| ||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 1126 aggacctgcacatgttcgtgtggagctcaagcgcctcgccggtgtcgga 1174
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 91.7 bits (46), Expect = 2e-15 Identities = 100/117 (85%), Gaps = 1/117 (0%) Strand = Plus / Minus Query: 350 cggcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagc 409 |||||||||||||| |||||||||||||| |||| |||||||||||||| ||| | |||| Sbjct: 1703418 cggcgatgccgccggcgagcgtgatgacgaggctcatcctgatcatggtttggaggaagc 1703359 Query: 410 tcatccgcaa-cccnacacctactccagcctcatcggcctcatctggtcgctcgtct 465 | ||| | || ||| |||| |||||||||||| | || |||||||||| ||||||| Sbjct: 1703358 tgatcaggaaccccaacacttactccagcctccttggtgtcatctggtccctcgtct 1703302 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 92 aggacctccacatgttcgtctggagctccagcgcgtcgccggtgtcgga 140 ||||||| ||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 1704063 aggacctgcacatgttcgtgtggagctcaagcgcctcgccggtgtcgga 1704015
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 87.7 bits (44), Expect = 3e-14 Identities = 98/115 (85%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 352 gcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctc 411 |||||||||||| |||||||||||||| |||| || ||||||||||| ||| | ||||| Sbjct: 1658680 gcgatgccgccggcgagcgtgatgacgaggctcatactgatcatggtctggaggaagctg 1658621 Query: 412 atccgcaaccc-nacacctactccagcctcatcggcctcatctggtcgctcgtct 465 ||| | ||||| |||| |||||||||||| |||| |||||||||| ||||||| Sbjct: 1658620 atcaggaacccaaacacttactccagcctcctcggtgtcatctggtccctcgtct 1658566 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 92 aggacctccacatgttcgtctggagctccagcgcgtcgccggtgtcgga 140 ||||||| ||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 1659319 aggacctgcacatgttcgtgtggagctcaagcgcctcgccggtgtcgga 1659271
>dbj|AK059577.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-A11, full insert sequence Length = 1255 Score = 87.7 bits (44), Expect = 3e-14 Identities = 98/115 (85%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 352 gcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctc 411 |||||||||||| |||||||||||||| |||| || ||||||||||| ||| | ||||| Sbjct: 417 gcgatgccgccggcgagcgtgatgacgaggctcatactgatcatggtctggaggaagctg 476 Query: 412 atccgcaaccc-nacacctactccagcctcatcggcctcatctggtcgctcgtct 465 ||| | ||||| |||| |||||||||||| |||| |||||||||| ||||||| Sbjct: 477 atcaggaacccaaacacttactccagcctcctcggtgtcatctggtccctcgtct 531 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 92 aggacctccacatgttcgtctggagctccagcgcgtcgccggtgtcgga 140 ||||||| ||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 163 aggacctgcacatgttcgtgtggagctcaagcgcctcgccggtgtcgga 211
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 87.7 bits (44), Expect = 3e-14 Identities = 98/115 (85%), Gaps = 1/115 (0%) Strand = Plus / Minus Query: 352 gcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctc 411 |||||||||||| |||||||||||||| |||| || ||||||||||| ||| | ||||| Sbjct: 1658660 gcgatgccgccggcgagcgtgatgacgaggctcatactgatcatggtctggaggaagctg 1658601 Query: 412 atccgcaaccc-nacacctactccagcctcatcggcctcatctggtcgctcgtct 465 ||| | ||||| |||| |||||||||||| |||| |||||||||| ||||||| Sbjct: 1658600 atcaggaacccaaacacttactccagcctcctcggtgtcatctggtccctcgtct 1658546 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Minus Query: 92 aggacctccacatgttcgtctggagctccagcgcgtcgccggtgtcgga 140 ||||||| ||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 1659299 aggacctgcacatgttcgtgtggagctcaagcgcctcgccggtgtcgga 1659251
>emb|BX000508.1|CNS08CDY Oryza sativa chromosome 12, . BAC OJ1575_G05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 91883 Score = 87.7 bits (44), Expect = 3e-14 Identities = 98/115 (85%), Gaps = 1/115 (0%) Strand = Plus / Plus Query: 352 gcgatgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctc 411 |||||||||||| |||||||||||||| |||| || ||||||||||| ||| | ||||| Sbjct: 34244 gcgatgccgccggcgagcgtgatgacgaggctcatactgatcatggtctggaggaagctg 34303 Query: 412 atccgcaaccc-nacacctactccagcctcatcggcctcatctggtcgctcgtct 465 ||| | ||||| |||| |||||||||||| |||| |||||||||| ||||||| Sbjct: 34304 atcaggaacccaaacacttactccagcctcctcggtgtcatctggtccctcgtct 34358 Score = 65.9 bits (33), Expect = 1e-07 Identities = 45/49 (91%) Strand = Plus / Plus Query: 92 aggacctccacatgttcgtctggagctccagcgcgtcgccggtgtcgga 140 ||||||| ||||||||||| |||||||| ||||| |||||||||||||| Sbjct: 33605 aggacctgcacatgttcgtgtggagctcaagcgcctcgccggtgtcgga 33653
>emb|AJ132363.1|BJU132363 Brassica juncea mRNA for efflux carrier of polar auxin transport Length = 2581 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/102 (85%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 |||||||| |||||||||||||| ||||||| ||||||||||||||| | ||| | ||| Sbjct: 1563 atgccgcctgcgagcgtgatgacgaggctgatactgatcatggtgtggaggaagttaatc 1622 Query: 415 cgcaaccc-nacacctactccagcctcatcggcctcatctgg 455 | ||||| |||| ||||| |||||||| |||||||||||| Sbjct: 1623 agaaacccaaacacttactctagcctcattggcctcatctgg 1664
>gb|AY110024.1| Zea mays CL464_3 mRNA sequence Length = 1221 Score = 77.8 bits (39), Expect = 3e-11 Identities = 54/59 (91%) Strand = Plus / Plus Query: 92 aggacctccacatgttcgtctggagctccagcgcgtcgccggtgtcggacgtcttcggc 150 ||||||| ||||||||||| |||||||||||||||||||| ||||| ||||| |||||| Sbjct: 1139 aggacctacacatgttcgtgtggagctccagcgcgtcgcccgtgtccgacgtgttcggc 1197
>emb|AJ307884.1|BJU307884 Brassica juncea pin1 gene, 5'UTR Length = 3213 Score = 77.8 bits (39), Expect = 3e-11 Identities = 87/102 (85%), Gaps = 1/102 (0%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 |||||||| |||||||||||||| ||||||| ||||||||||||||| | ||| | ||| Sbjct: 1628 atgccgcctgcgagcgtgatgacgaggctgatactgatcatggtgtggaggaagttaatc 1687 Query: 415 cgcaaccc-nacacctactccagcctcatcggcctcatctgg 455 | ||||| |||| ||||| |||||||| |||||||||||| Sbjct: 1688 agaaacccaaacacttactctagcctcattggcctcatctgg 1729
>emb|AJ249298.1|BJU249298 Brassica juncea mRNA for efflux carrier, pin3 (pin3 gene) Length = 2316 Score = 71.9 bits (36), Expect = 2e-09 Identities = 90/107 (84%), Gaps = 1/107 (0%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 ||||||||| |||| ||||||||| ||||||| ||||||||||| ||| | ||||| ||| Sbjct: 1461 atgccgccggcgagtgtgatgacgaggctgatactgatcatggtatggaggaagctgatc 1520 Query: 415 cgcaaccc-nacacctactccagcctcatcggcctcatctggtcgct 460 | ||||| |||| ||||| |||||||| |||||||| ||| |||| Sbjct: 1521 agaaaccctaacacttactctagcctcattggcctcatttgggcgct 1567
>emb|AJ249297.1|BJU249297 Brassica juncea mRNA for efflux carrier, pin2 (pin2 gene) Length = 2462 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtgg 402 ||||||||| |||||||||||||| ||||||| ||||||||||||||| Sbjct: 1543 atgccgccggcgagcgtgatgacgaggctgatactgatcatggtgtgg 1590
>gb|AF247005.1| Momordica charantia auxin efflux carrier (AEC3) mRNA, complete cds Length = 2512 Score = 63.9 bits (32), Expect = 4e-07 Identities = 50/56 (89%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagct 410 ||||| ||||||||||| ||||| || |||||| | |||||||||||||||||||| Sbjct: 1531 atgcctccgacgagcgttatgacccgtctgatcttaatcatggtgtggcgcaagct 1586
>ref|XM_475933.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1719 Score = 54.0 bits (27), Expect = 4e-04 Identities = 38/42 (90%) Strand = Plus / Plus Query: 420 cccnacacctactccagcctcatcggcctcatctggtcgctc 461 ||| |||| ||| |||||||||||||||||| |||||||||| Sbjct: 1333 cccaacacgtacgccagcctcatcggcctcacctggtcgctc 1374
>gb|AC098571.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_B10, complete sequence Length = 127304 Score = 54.0 bits (27), Expect = 4e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 420 cccnacacctactccagcctcatcggcctcatctggtcgctc 461 ||| |||| ||| |||||||||||||||||| |||||||||| Sbjct: 43793 cccaacacgtacgccagcctcatcggcctcacctggtcgctc 43752
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 54.0 bits (27), Expect = 4e-04 Identities = 38/42 (90%) Strand = Plus / Minus Query: 420 cccnacacctactccagcctcatcggcctcatctggtcgctc 461 ||| |||| ||| |||||||||||||||||| |||||||||| Sbjct: 28516100 cccaacacgtacgccagcctcatcggcctcacctggtcgctc 28516059 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/34 (94%), Gaps = 2/34 (5%) Strand = Plus / Minus Query: 430 actccagcctcatcggc--ctcatctggtcgctc 461 ||||||||||||||||| ||||||||||||||| Sbjct: 16412231 actccagcctcatcggcctctcatctggtcgctc 16412198 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tcggcctcatctggtcgctc 461 |||||||||||||||||||| Sbjct: 24993899 tcggcctcatctggtcgctc 24993918 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cgcaagctcatccgcaaccc 422 |||||||||||||||||||| Sbjct: 21058818 cgcaagctcatccgcaaccc 21058799
>ref|XM_463417.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 768 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 234 cgtggagcgagacgacttcagcttcgggaacaggggcg 271 ||||||||| |||||||||||||||||| |||| |||| Sbjct: 225 cgtggagcgggacgacttcagcttcgggtacagaggcg 262
>dbj|AP003373.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1116_H09 Length = 110086 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 234 cgtggagcgagacgacttcagcttcgggaacaggggcg 271 ||||||||| |||||||||||||||||| |||| |||| Sbjct: 44954 cgtggagcgggacgacttcagcttcgggtacagaggcg 44917
>gb|AY115836.1| Medicago truncatula auxin efflux carrier protein (PIN1) gene, complete cds Length = 4127 Score = 50.1 bits (25), Expect = 0.007 Identities = 49/56 (87%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 388 ctgatcatggtgtggcgcaagctcatccgcaaccc-nacacctactccagcctcat 442 ||||||||||| ||||| ||||| ||||| ||||| |||| |||||||||||||| Sbjct: 1963 ctgatcatggtttggcggaagcttatccgtaacccaaacacgtactccagcctcat 2018
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Plus Query: 16 cccgcgccgaacccggcggtggccgcggcgc 46 |||||||||||||||| ||||||||| |||| Sbjct: 1240776 cccgcgccgaacccggtggtggccgccgcgc 1240806
>ref|NM_126203.2| Arabidopsis thaliana PIN4 (PIN-FORMED 4); auxin:hydrogen symporter/ transporter AT2G01420 (PIN4) transcript variant AT2G01420.1 mRNA, complete cds Length = 2341 Score = 46.1 bits (23), Expect = 0.10 Identities = 80/98 (81%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 ||||||||||| || |||||||| || ||||| |||| ||||||||| | ||||| ||| Sbjct: 1462 atgccgccgacaagtgtgatgacacgactgatattgataatggtgtggagaaagctgatc 1521 Query: 415 cgcaaccc-nacacctactccagcctcatcggcctcat 451 | ||||| |||| |||||||| || ||||| ||||| Sbjct: 1522 agaaacccaaacacgtactccagtctaatcggtctcat 1559
>ref|NM_179592.1| Arabidopsis thaliana PIN4 (PIN-FORMED 4); auxin:hydrogen symporter AT2G01420 (PIN4) transcript variant AT2G01420.2 mRNA, complete cds Length = 2353 Score = 46.1 bits (23), Expect = 0.10 Identities = 80/98 (81%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 ||||||||||| || |||||||| || ||||| |||| ||||||||| | ||||| ||| Sbjct: 1474 atgccgccgacaagtgtgatgacacgactgatattgataatggtgtggagaaagctgatc 1533 Query: 415 cgcaaccc-nacacctactccagcctcatcggcctcat 451 | ||||| |||| |||||||| || ||||| ||||| Sbjct: 1534 agaaacccaaacacgtactccagtctaatcggtctcat 1571
>gb|AC136221.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0077J17, complete sequence Length = 141598 Score = 46.1 bits (23), Expect = 0.10 Identities = 32/34 (94%), Gaps = 2/34 (5%) Strand = Plus / Minus Query: 430 actccagcctcatcggc--ctcatctggtcgctc 461 ||||||||||||||||| ||||||||||||||| Sbjct: 52668 actccagcctcatcggcctctcatctggtcgctc 52635
>gb|AY091009.1| Arabidopsis thaliana putative auxin transport protein (At2g01420) mRNA, complete cds Length = 2404 Score = 46.1 bits (23), Expect = 0.10 Identities = 80/98 (81%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 ||||||||||| || |||||||| || ||||| |||| ||||||||| | ||||| ||| Sbjct: 1469 atgccgccgacaagtgtgatgacacgactgatattgataatggtgtggagaaagctgatc 1528 Query: 415 cgcaaccc-nacacctactccagcctcatcggcctcat 451 | ||||| |||| |||||||| || ||||| ||||| Sbjct: 1529 agaaacccaaacacgtactccagtctaatcggtctcat 1566
>gb|BT008691.1| Arabidopsis thaliana clone RAFL09-75-E06 (R19634) putative auxin transport protein (At2g01420) mRNA, complete cds Length = 2358 Score = 46.1 bits (23), Expect = 0.10 Identities = 80/98 (81%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 ||||||||||| || |||||||| || ||||| |||| ||||||||| | ||||| ||| Sbjct: 1474 atgccgccgacaagtgtgatgacacgactgatattgataatggtgtggagaaagctgatc 1533 Query: 415 cgcaaccc-nacacctactccagcctcatcggcctcat 451 | ||||| |||| |||||||| || ||||| ||||| Sbjct: 1534 agaaacccaaacacgtactccagtctaatcggtctcat 1571
>gb|AC006200.3| Arabidopsis thaliana chromosome 2 clone F10A8 map rga, complete sequence Length = 94029 Score = 46.1 bits (23), Expect = 0.10 Identities = 80/98 (81%), Gaps = 1/98 (1%) Strand = Plus / Minus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 ||||||||||| || |||||||| || ||||| |||| ||||||||| | ||||| ||| Sbjct: 91294 atgccgccgacaagtgtgatgacacgactgatattgataatggtgtggagaaagctgatc 91235 Query: 415 cgcaaccc-nacacctactccagcctcatcggcctcat 451 | ||||| |||| |||||||| || ||||| ||||| Sbjct: 91234 agaaacccaaacacgtactccagtctaatcggtctcat 91197
>gb|AC005560.3| Arabidopsis thaliana chromosome 2 clone F2I9 map rga, complete sequence Length = 103125 Score = 46.1 bits (23), Expect = 0.10 Identities = 80/98 (81%), Gaps = 1/98 (1%) Strand = Plus / Minus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 ||||||||||| || |||||||| || ||||| |||| ||||||||| | ||||| ||| Sbjct: 8258 atgccgccgacaagtgtgatgacacgactgatattgataatggtgtggagaaagctgatc 8199 Query: 415 cgcaaccc-nacacctactccagcctcatcggcctcat 451 | ||||| |||| |||||||| || ||||| ||||| Sbjct: 8198 agaaacccaaacacgtactccagtctaatcggtctcat 8161
>dbj|AK221788.1| Arabidopsis thaliana mRNA for auxin transporter splice variant b, complete cds, clone: RAFL21-78-J19 Length = 1093 Score = 46.1 bits (23), Expect = 0.10 Identities = 80/98 (81%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 ||||||||||| || |||||||| || ||||| |||| ||||||||| | ||||| ||| Sbjct: 206 atgccgccgacaagtgtgatgacacgactgatattgataatggtgtggagaaagctgatc 265 Query: 415 cgcaaccc-nacacctactccagcctcatcggcctcat 451 | ||||| |||| |||||||| || ||||| ||||| Sbjct: 266 agaaacccaaacacgtactccagtctaatcggtctcat 303
>emb|BX820960.1|CNS0A83S Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH86ZB02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2205 Score = 46.1 bits (23), Expect = 0.10 Identities = 80/98 (81%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 ||||||||||| || |||||||| || ||||| |||| ||||||||| | ||||| ||| Sbjct: 1442 atgccgccgacaagtgtgatgacacgactgatattgataatggtgtggagaaagctgatc 1501 Query: 415 cgcaaccc-nacacctactccagcctcatcggcctcat 451 | ||||| |||| |||||||| || ||||| ||||| Sbjct: 1502 agaaacccaaacacgtactccagtctaatcggtctcat 1539
>gb|AF087016.1|AF087016 Arabidopsis thaliana auxin transporter splice variant b (PIN4) mRNA, complete cds Length = 2264 Score = 46.1 bits (23), Expect = 0.10 Identities = 80/98 (81%), Gaps = 1/98 (1%) Strand = Plus / Plus Query: 355 atgccgccgacgagcgtgatgacgcggctgatcctgatcatggtgtggcgcaagctcatc 414 ||||||||||| || |||||||| || ||||| |||| ||||||||| | ||||| ||| Sbjct: 1369 atgccgccgacaagtgtgatgacacgactgatattgataatggtgtggagaaagctgatc 1428 Query: 415 cgcaaccc-nacacctactccagcctcatcggcctcat 451 | ||||| |||| |||||||| || ||||| ||||| Sbjct: 1429 agaaacccaaacacgtactccagtctaatcggtctcat 1466
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 28 ccggcggtggccgcggcgccca 49 |||||||||||||||||||||| Sbjct: 136056 ccggcggtggccgcggcgccca 136077
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 339 cgcggggccgacggcgatgccgccga 364 |||| ||||||||||||||||||||| Sbjct: 4076262 cgcgaggccgacggcgatgccgccga 4076237
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Minus Query: 339 cgcggggccgacggcgatgccgccgacgagcgtgatgacgc 379 ||||| |||||||||||||||| || ||| |||||| |||| Sbjct: 2519344 cgcggcgccgacggcgatgccgacgccgaacgtgatcacgc 2519304
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 ggcggtggccgcggcgcccaa 50 ||||||||||||||||||||| Sbjct: 679524 ggcggtggccgcggcgcccaa 679544 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 450 atctggtcgctcgtctgcttcagg 473 ||||||||| |||||||||||||| Sbjct: 2291731 atctggtcgatcgtctgcttcagg 2291754
>gb|BC082251.1| Homo sapiens signal-induced proliferation-associated 1 like 2, mRNA (cDNA clone IMAGE:6086605), partial cds Length = 2375 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 gacggagccaaggagagggaagac 228 |||||||||| ||||||||||||| Sbjct: 299 gacggagccagggagagggaagac 322
>ref|NM_105762.2| Arabidopsis thaliana PIN3 (PIN-FORMED 3); auxin:hydrogen symporter/ transporter AT1G70940 (PIN3) mRNA, complete cds Length = 2563 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cacatgttcgtctggagctc 119 |||||||||||||||||||| Sbjct: 1185 cacatgttcgtctggagctc 1204
>ref|XM_479764.1| Oryza sativa (japonica cultivar-group), mRNA Length = 904 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 acaacgacgccgcggccgct 186 |||||||||||||||||||| Sbjct: 203 acaacgacgccgcggccgct 184
>ref|XM_475670.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 375 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tcggcctcatctggtcgctc 461 |||||||||||||||||||| Sbjct: 243 tcggcctcatctggtcgctc 262
>ref|XM_475281.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cgcaagctcatccgcaaccc 422 |||||||||||||||||||| Sbjct: 981 cgcaagctcatccgcaaccc 962
>ref|XM_466874.1| Oryza sativa (japonica cultivar-group), mRNA Length = 312 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 acaacgacgccgcggccgct 186 |||||||||||||||||||| Sbjct: 122 acaacgacgccgcggccgct 141
>ref|XM_466873.1| Oryza sativa (japonica cultivar-group), mRNA Length = 901 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 acaacgacgccgcggccgct 186 |||||||||||||||||||| Sbjct: 203 acaacgacgccgcggccgct 184
>ref|NM_191445.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 480 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tcggcctcatctggtcgctc 461 |||||||||||||||||||| Sbjct: 285 tcggcctcatctggtcgctc 304
>ref|XM_476996.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2082 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 aacccggcggtggccgcggc 44 |||||||||||||||||||| Sbjct: 1343 aacccggcggtggccgcggc 1324
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 356 tgccgccgacgagcgtgatgacgc 379 |||||||||| ||||||||||||| Sbjct: 318141 tgccgccgaccagcgtgatgacgc 318118 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 cccggcggtggccgcggcgc 46 |||||||||||||||||||| Sbjct: 231335 cccggcggtggccgcggcgc 231316
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 347 cgacggcgatgccgccgacgagcgtgatgacg 378 ||||| ||||||||||| ||||||||| |||| Sbjct: 1872856 cgacgacgatgccgccgccgagcgtgacgacg 1872825
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ccccgcgccgaacccggcgg 34 |||||||||||||||||||| Sbjct: 1647492 ccccgcgccgaacccggcgg 1647473
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 cgcggggccgacggcgatgc 358 |||||||||||||||||||| Sbjct: 1494373 cgcggggccgacggcgatgc 1494354
>gb|AC108502.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1378_A04, complete sequence Length = 103458 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cgcaagctcatccgcaaccc 422 |||||||||||||||||||| Sbjct: 74196 cgcaagctcatccgcaaccc 74177
>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0108E17, complete sequence Length = 139829 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tcggcctcatctggtcgctc 461 |||||||||||||||||||| Sbjct: 62752 tcggcctcatctggtcgctc 62771
>gb|AC105769.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1301_G07, complete sequence Length = 106166 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cgcaagctcatccgcaaccc 422 |||||||||||||||||||| Sbjct: 37683 cgcaagctcatccgcaaccc 37664
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 347 cgacggcgatgccgccgacgagcgtgatgacg 378 ||||| ||||||||||| ||||||||| |||| Sbjct: 1592679 cgacgacgatgccgccgccgagcgtgacgacg 1592710
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 365 cgagcgtgatgacgcggctg 384 |||||||||||||||||||| Sbjct: 4091537 cgagcgtgatgacgcggctg 4091518
>gb|BC013119.1| Homo sapiens signal-induced proliferation-associated 1 like 2, mRNA (cDNA clone IMAGE:3857408), complete cds Length = 3111 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 gacggagccaaggagagggaagac 228 |||||||||| ||||||||||||| Sbjct: 270 gacggagccagggagagggaagac 293
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gccggccgcgaacgggcagg 82 |||||||||||||||||||| Sbjct: 4104235 gccggccgcgaacgggcagg 4104216
>emb|AL356965.14| Human DNA sequence from clone RP11-399B22 on chromosome 1 Contains the 3' end of the SIPA1L2 gene for signal-induced proliferation-associated 1 like 2, complete sequence Length = 61419 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 gacggagccaaggagagggaagac 228 |||||||||| ||||||||||||| Sbjct: 60955 gacggagccagggagagggaagac 60932
>gb|CP000092.1| Ralstonia eutropha JMP134 megaplasmid, complete sequence Length = 634917 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 144 cttcggcggcggcgcaccgg 163 |||||||||||||||||||| Sbjct: 433793 cttcggcggcggcgcaccgg 433812
>emb|AL157409.16| Human DNA sequence from clone RP5-823D19 on chromosome 1q42.11-43 Contains the 5' end of the SIPA1L2 gene for signal-induced proliferation-associated 1 like 2, complete sequence Length = 143798 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 gacggagccaaggagagggaagac 228 |||||||||| ||||||||||||| Sbjct: 1536 gacggagccagggagagggaagac 1513
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 ggccgacggcgatgccgccgacga 367 ||||| |||||||||||||||||| Sbjct: 471748 ggccgccggcgatgccgccgacga 471725
>emb|BX572601.1| Rhodopseudomonas palustris CGA009 complete genome; segment 9/16 Length = 348580 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 62 agccggccgcgaacgggcaggcca 85 |||||||||||||||| ||||||| Sbjct: 111425 agccggccgcgaacggccaggcca 111402
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/32 (90%) Strand = Plus / Plus Query: 347 cgacggcgatgccgccgacgagcgtgatgacg 378 ||||| ||||||||||| ||||||||| |||| Sbjct: 1479847 cgacgacgatgccgccgccgagcgtgacgacg 1479878
>gb|AY136327.1| Arabidopsis thaliana putative auxin transport protein REH1 (At1g70940) mRNA, complete cds Length = 2489 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cacatgttcgtctggagctc 119 |||||||||||||||||||| Sbjct: 1185 cacatgttcgtctggagctc 1204
>gb|AF498269.1| Haynaldia villosa clone kong32 mRNA Length = 1219 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tcggcctcatctggtcgctc 461 |||||||||||||||||||| Sbjct: 1008 tcggcctcatctggtcgctc 1027
>dbj|AK093191.1| Homo sapiens cDNA FLJ35872 fis, clone TESTI2008189, weakly similar to SPA-1 like protein p1294 Length = 2937 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 gacggagccaaggagagggaagac 228 |||||||||| ||||||||||||| Sbjct: 895 gacggagccagggagagggaagac 918
>dbj|AK022852.1| Homo sapiens cDNA FLJ12790 fis, clone NT2RP2001985, weakly similar to Homo sapiens high-risk human papilloma viruses E6 oncoproteins targeted protein E6TP1 alpha mRNA Length = 2647 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 gacggagccaaggagagggaagac 228 |||||||||| ||||||||||||| Sbjct: 359 gacggagccagggagagggaagac 382
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 ggcgatgccgccgacgagcg 370 |||||||||||||||||||| Sbjct: 783941 ggcgatgccgccgacgagcg 783922
>gb|AF497511.2| Zea mays alkaline alpha galactosidase 2 mRNA, complete cds Length = 2795 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gagctccagcgcgtcgccgg 133 |||||||||||||||||||| Sbjct: 842 gagctccagcgcgtcgccgg 823
>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III, complete sequence Length = 907057 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 ccagcgcgtcgccggtgtcg 138 |||||||||||||||||||| Sbjct: 621245 ccagcgcgtcgccggtgtcg 621264
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 acaacgacgccgcggccgct 186 |||||||||||||||||||| Sbjct: 743851 acaacgacgccgcggccgct 743832
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 aacccggcggtggccgcggc 44 |||||||||||||||||||| Sbjct: 5271390 aacccggcggtggccgcggc 5271409
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 gacggcgatgccgccgacga 367 |||||||||||||||||||| Sbjct: 4513908 gacggcgatgccgccgacga 4513889 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 ccgcgccgaacccggcggtg 36 |||||||||||||||||||| Sbjct: 3825115 ccgcgccgaacccggcggtg 3825134 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 cgaacccggcggtggccgcg 42 |||||||||||||||||||| Sbjct: 613182 cgaacccggcggtggccgcg 613201
>dbj|AP003265.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0490D09 Length = 154430 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 tcggcctcatctggtcgctc 461 |||||||||||||||||||| Sbjct: 64861 tcggcctcatctggtcgctc 64842
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 21 gccgaacccggcggtggccgcggc 44 |||||||||| ||||||||||||| Sbjct: 2935692 gccgaacccgccggtggccgcggc 2935715
>dbj|AP005257.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0417F02 Length = 150660 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 aacccggcggtggccgcggc 44 |||||||||||||||||||| Sbjct: 5754 aacccggcggtggccgcggc 5773
>dbj|AP004379.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0589E08 Length = 138416 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 aacccggcggtggccgcggc 44 |||||||||||||||||||| Sbjct: 70153 aacccggcggtggccgcggc 70172
>dbj|AP006168.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1469H02 Length = 136602 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 acaacgacgccgcggccgct 186 |||||||||||||||||||| Sbjct: 107233 acaacgacgccgcggccgct 107252
>dbj|AP005657.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0427G12 Length = 185545 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 acaacgacgccgcggccgct 186 |||||||||||||||||||| Sbjct: 43071 acaacgacgccgcggccgct 43052
>dbj|AK119225.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-H08, full insert sequence Length = 1475 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tcggcctcatctggtcgctc 461 |||||||||||||||||||| Sbjct: 1220 tcggcctcatctggtcgctc 1239
>dbj|AK119161.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-D04, full insert sequence Length = 639 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tcggcctcatctggtcgctc 461 |||||||||||||||||||| Sbjct: 363 tcggcctcatctggtcgctc 382
>dbj|AK107979.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-E04, full insert sequence Length = 904 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 acaacgacgccgcggccgct 186 |||||||||||||||||||| Sbjct: 203 acaacgacgccgcggccgct 184
>dbj|AK099260.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023004C23, full insert sequence Length = 1743 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cgcaagctcatccgcaaccc 422 |||||||||||||||||||| Sbjct: 1091 cgcaagctcatccgcaaccc 1072
>dbj|AK072299.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011H02, full insert sequence Length = 1918 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cgcaagctcatccgcaaccc 422 |||||||||||||||||||| Sbjct: 1024 cgcaagctcatccgcaaccc 1005
>dbj|AK071117.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080D08, full insert sequence Length = 1314 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cgcaagctcatccgcaaccc 422 |||||||||||||||||||| Sbjct: 1097 cgcaagctcatccgcaaccc 1078
>ref|NM_208908.1| Eremothecium gossypii ACR153Cp (ACR153C), mRNA Length = 942 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 ccagcgcgtcgccggtgtcg 138 |||||||||||||||||||| Sbjct: 619 ccagcgcgtcgccggtgtcg 600
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 347 cgacggcgatgccgccgacgagcg 370 |||||||||||||| ||||||||| Sbjct: 1965495 cgacggcgatgccgtcgacgagcg 1965518
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 ccggccgcgaacgggcaggc 83 |||||||||||||||||||| Sbjct: 510472 ccggccgcgaacgggcaggc 510491
>dbj|AK066345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064H24, full insert sequence Length = 741 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tcggcctcatctggtcgctc 461 |||||||||||||||||||| Sbjct: 327 tcggcctcatctggtcgctc 346
>gb|BT002085.1| Arabidopsis thaliana putative auxin transport protein REH1 (At1g70940) mRNA, complete cds Length = 2380 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cacatgttcgtctggagctc 119 |||||||||||||||||||| Sbjct: 1069 cacatgttcgtctggagctc 1088
>dbj|AK060476.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-F04, full insert sequence Length = 522 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tcggcctcatctggtcgctc 461 |||||||||||||||||||| Sbjct: 367 tcggcctcatctggtcgctc 386
>dbj|AK060438.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-D03, full insert sequence Length = 635 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 tcggcctcatctggtcgctc 461 |||||||||||||||||||| Sbjct: 367 tcggcctcatctggtcgctc 386
>dbj|AK058468.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-B07, full insert sequence Length = 1763 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 403 cgcaagctcatccgcaaccc 422 |||||||||||||||||||| Sbjct: 1030 cgcaagctcatccgcaaccc 1011
>gb|AC008148.2|AC008148 Arabidopsis thaliana chromosome I BAC F15H11 genomic sequence, complete sequence Length = 110514 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cacatgttcgtctggagctc 119 |||||||||||||||||||| Sbjct: 61838 cacatgttcgtctggagctc 61857
>gb|AF087818.1|AF087818 Arabidopsis thaliana auxin transport protein (PIN3) mRNA, complete cds Length = 2499 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 cacatgttcgtctggagctc 119 |||||||||||||||||||| Sbjct: 1174 cacatgttcgtctggagctc 1193
>ref|NM_020808.1| Homo sapiens signal-induced proliferation-associated 1 like 2 (SIPA1L2), mRNA Length = 5801 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 gacggagccaaggagagggaagac 228 |||||||||| ||||||||||||| Sbjct: 2963 gacggagccagggagagggaagac 2986
>gb|AY168879.1| Homo sapiens SPA-1-like 2 (SPAL2) mRNA, complete cds Length = 6557 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 gacggagccaaggagagggaagac 228 |||||||||| ||||||||||||| Sbjct: 3719 gacggagccagggagagggaagac 3742
>gb|AC167967.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940144D9, complete sequence Length = 114276 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 ccgacggcgatgccgccgacgagc 369 |||||||||||| ||||||||||| Sbjct: 111773 ccgacggcgatggcgccgacgagc 111750
>dbj|AB022764.1| Hordeum vulgare mRNA for D-protein, complete cds Length = 1292 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 tgccgccgacgagcgtgatg 375 |||||||||||||||||||| Sbjct: 152 tgccgccgacgagcgtgatg 133
>dbj|AB037810.1| Homo sapiens mRNA for KIAA1389 protein, partial cds Length = 5801 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 gacggagccaaggagagggaagac 228 |||||||||| ||||||||||||| Sbjct: 2963 gacggagccagggagagggaagac 2986 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,079,532 Number of Sequences: 3902068 Number of extensions: 3079532 Number of successful extensions: 69137 Number of sequences better than 10.0: 122 Number of HSP's better than 10.0 without gapping: 126 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 64747 Number of HSP's gapped (non-prelim): 4345 length of query: 473 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 451 effective length of database: 17,147,199,772 effective search space: 7733387097172 effective search space used: 7733387097172 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
