ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet70f01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1APG_BRANA (P40603) Anter-specific proline-rich protein APG (Prot... 78 9e-15
2APG_ARATH (P40602) Anter-specific proline-rich protein APG precu... 75 8e-14
3FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51... 49 4e-06
4EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule... 43 4e-04
5SFAH_HELAN (P81098) Seed fatty acyl-ester hydrolase (EC 3.1.1.1)... 36 0.039
6CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48) 31 1.6
7KPRS_CLOAB (Q97E93) Ribose-phosphate pyrophosphokinase (EC 2.7.6... 30 2.8
8AMO_PICAN (P12807) Peroxisomal copper amine oxidase (EC 1.4.3.6)... 30 3.6
9GP149_HUMAN (Q86SP6) Probable G-protein coupled receptor 149 (G-... 29 6.2
10YLD1_CAEEL (Q03566) Probable G-protein coupled receptor C38C10.1 29 6.2
11KPRS_CLOTE (Q899I8) Ribose-phosphate pyrophosphokinase (EC 2.7.6... 29 6.2
12MHK_ARATH (P43294) Serine/threonine-protein kinase MHK (EC 2.7.1... 28 8.1

>APG_BRANA (P40603) Anter-specific proline-rich protein APG (Protein CEX)|
           (Fragment)
          Length = 449

 Score = 78.2 bits (191), Expect = 9e-15
 Identities = 42/94 (44%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
 Frame = +1

Query: 193 VPCYFVFGDSLVDNGNNNGIVSLARANYPPYGVDF-AGGPTGRFSNGLTTVDVISQLLGF 369
           +P  F FGDS+ D GNNN + +  + NY PYG+DF  G  TGRFSNG    D IS+ LG 
Sbjct: 123 IPAVFFFGDSIFDTGNNNNLDTKLKCNYRPYGMDFPMGVATGRFSNGRVASDYISKYLGV 182

Query: 370 DDFIPPFAGATSDQ--------LLTGVNFASAAA 447
            + +P +      Q        LLTGV+FAS  A
Sbjct: 183 KEIVPAYVDKKLQQNNELQQSDLLTGVSFASGGA 216



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>APG_ARATH (P40602) Anter-specific proline-rich protein APG precursor|
          Length = 534

 Score = 75.1 bits (183), Expect = 8e-14
 Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
 Frame = +1

Query: 193 VPCYFVFGDSLVDNGNNNGIVSLARANYPPYGVDFA-GGPTGRFSNGLTTVDVISQLLGF 369
           +P  F FGDS+ D GNNN + +  ++NY PYG+DF     TGRFSNG+   D +++ +G 
Sbjct: 202 IPAVFFFGDSVFDTGNNNNLETKIKSNYRPYGMDFKFRVATGRFSNGMVASDYLAKYMGV 261

Query: 370 DDFIPPFAG--ATSDQLLTGVNFASAAA 447
            + +P +       + LLTGV+FAS  A
Sbjct: 262 KEIVPAYLDPKIQPNDLLTGVSFASGGA 289



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>FUCO2_ARATH (Q9FXE5) Alpha-L-fucosidase 2 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase 2)
           (Alpha-1,2-fucosidase) (AtFXG1)
          Length = 372

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 28/84 (33%), Positives = 40/84 (47%)
 Frame = +1

Query: 196 PCYFVFGDSLVDNGNNNGIVSLARANYPPYGVDFAGGPTGRFSNGLTTVDVISQLLGFDD 375
           P  F FGDS  D G  +     A    PP+G  F G P GR+ +G   +D I++ LG   
Sbjct: 29  PAIFNFGDSNSDTGGLSAAFGQAG---PPHGSSFFGSPAGRYCDGRLVIDFIAESLGL-P 84

Query: 376 FIPPFAGATSDQLLTGVNFASAAA 447
           ++  F  +       G NFA+A +
Sbjct: 85  YLSAFLDSVGSNFSHGANFATAGS 108



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>EST_HEVBR (Q7Y1X1) Esterase precursor (EC 3.1.1.-) (Early nodule-specific|
           protein homolog) (Latex allergen Hev b 13)
          Length = 391

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
 Frame = +1

Query: 196 PCYFVFGDSLVDNGNNNGIVSLARANYP---PYGVDFAGGPTGRFSNGLTTVDVISQLLG 366
           P  F FGDS  D G        A A YP   PYG  F    TGR+S+G   +D I++   
Sbjct: 33  PAIFNFGDSNSDTGGK------AAAFYPLNPPYGETFFHRSTGRYSDGRLIIDFIAESFN 86

Query: 367 FDDFIPPFAGATSDQLLTGVNFASAAA 447
              ++ P+  +       G +FA+A +
Sbjct: 87  L-PYLSPYLSSLGSNFKHGADFATAGS 112



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>SFAH_HELAN (P81098) Seed fatty acyl-ester hydrolase (EC 3.1.1.1) (Fragment)|
          Length = 18

 Score = 36.2 bits (82), Expect = 0.039
 Identities = 14/18 (77%), Positives = 16/18 (88%)
 Frame = +1

Query: 184 EPQVPCYFVFGDSLVDNG 237
           +PQVP YF+FGDSL DNG
Sbjct: 1   DPQVPXYFIFGDSLYDNG 18



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>CBP_MOUSE (P45481) CREB-binding protein (EC 2.3.1.48)|
          Length = 2441

 Score = 30.8 bits (68), Expect = 1.6
 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
 Frame = -1

Query: 449  PAAAEAKLTPVRSWSLVAPAKGGMKS-----SKPRSWEMTSTVVSPLEKRPVGPPAKSTP 285
            PAA     TPV S     P  G + S     S P         V+P  + PV PP+ +TP
Sbjct: 884  PAAPTQPSTPVSSGQTPTPTPGSVPSAAQTQSTPTVQAAAQAQVTPQPQTPVQPPSVATP 943



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>KPRS_CLOAB (Q97E93) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)|
           (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP
           synthetase) (PRPP synthetase)
          Length = 319

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 6/59 (10%)
 Frame = +1

Query: 223 LVDNGNN------NGIVSLARANYPPYGVDFAGGPTGRFSNGLTTVDVISQLLGFDDFI 381
           ++++G N      N   SLA       GV       G+FSNG T VD+   + G D F+
Sbjct: 1   MINHGKNIKIFTGNSYPSLAEEIADIIGVQVGDSRVGKFSNGETAVDINETVRGTDLFL 59



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>AMO_PICAN (P12807) Peroxisomal copper amine oxidase (EC 1.4.3.6) (Methylamine|
           oxidase)
          Length = 692

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -1

Query: 416 RSWSLVAPAKGGMKSSKPRSWEMTSTVVSPLEKRPVGPPAKSTP 285
           RSW +  P K    S KP S+++ ST   PL  +     AK  P
Sbjct: 521 RSWDIFNPNKVNPYSGKPPSYKLVSTQCPPLLAKEGSLVAKRAP 564



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>GP149_HUMAN (Q86SP6) Probable G-protein coupled receptor 149 (G-protein coupled|
           receptor PGR10)
          Length = 731

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 8/43 (18%)
 Frame = +1

Query: 13  LVAITINLTHSLA--------HSNQQQLTRSAPVPLGSAMAGR 117
           LV +++ LTH L         HSN Q+++R A +P     AGR
Sbjct: 205 LVGLSVPLTHRLLCSEEPPRLHSNYQEISRGASIPGTPPTAGR 247



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>YLD1_CAEEL (Q03566) Probable G-protein coupled receptor C38C10.1|
          Length = 374

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 428 LTPVRSWSLVAPAKGGMKSSKPRSWEMTSTVVSPLEKRPV 309
           L  + S+  +AP    + S    SW+    VV+PL+KRP+
Sbjct: 82  LCTLTSFFGIAPTTVSVCSMMALSWDRCQAVVNPLQKRPL 121



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>KPRS_CLOTE (Q899I8) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)|
           (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP
           synthetase) (PRPP synthetase)
          Length = 320

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +1

Query: 235 GNNNGIVSLARANYPPYGVDFAGGPTGRFSNGLTTVDVISQLLGFDDFI 381
           GN+N    LA+      GV       GRFS+G  TV++   + G D FI
Sbjct: 15  GNSND--KLAKDIADIVGVPLGSAEVGRFSDGEITVNINETVRGIDAFI 61



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>MHK_ARATH (P43294) Serine/threonine-protein kinase MHK (EC 2.7.11.22)|
          Length = 443

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -1

Query: 410 WSLVAPAKGGMKSSKPRSWEMTSTVVSPLEKRPVGPPAKS 291
           WSL++P + G+ +  P      S   SP+++  VGPP  S
Sbjct: 376 WSLLSPDENGLHA--PVESSPLSLSFSPMQQHTVGPPQSS 413


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,118,919
Number of Sequences: 219361
Number of extensions: 627247
Number of successful extensions: 2333
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2329
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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