ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet70c12 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_192099.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1005 Score = 258 bits (130), Expect = 1e-65 Identities = 214/242 (88%) Strand = Plus / Plus Query: 133 gatgcgcggccacaacgacgtggtgacggcgatcgcggcgccgatcgacaactcgcccta 192 ||||| |||||||||||||||||||||||| |||||| | || |||||||||||||| | Sbjct: 39 gatgcacggccacaacgacgtggtgacggccatcgcgacccccatcgacaactcgccgtt 98 Query: 193 catcgtgtccggctcccgcgacaagtcgctgctggtctgggacctcaccaacccggtcgc 252 |||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 99 catcgtctcctcctcccgcgacaagtcgctgctggtgtgggacctcaccaaccccgtcca 158 Query: 253 gtccctcggcgacggcaccgtcggcaccgactacgccgtgcccttccgccgcctcaccgg 312 | | ||||||| ||| ||| || | |||| |||| |||||||||||||||||||||||| Sbjct: 159 gaacgtcggcgagggcgccggcgcctccgagtacggcgtgcccttccgccgcctcaccgg 218 Query: 313 ccacggccacttcgtccaggacgtcgtcatcagctccgacggccagttcgcgctctcggg 372 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 219 ccactcccacttcgtccaggacgtcgtcctcagctccgacggccagttcgcgctctctgg 278 Query: 373 ct 374 || Sbjct: 279 ct 280
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 258 bits (130), Expect = 1e-65 Identities = 214/242 (88%) Strand = Plus / Plus Query: 133 gatgcgcggccacaacgacgtggtgacggcgatcgcggcgccgatcgacaactcgcccta 192 ||||| |||||||||||||||||||||||| |||||| | || |||||||||||||| | Sbjct: 28324193 gatgcacggccacaacgacgtggtgacggccatcgcgacccccatcgacaactcgccgtt 28324252 Query: 193 catcgtgtccggctcccgcgacaagtcgctgctggtctgggacctcaccaacccggtcgc 252 |||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 28324253 catcgtctcctcctcccgcgacaagtcgctgctggtgtgggacctcaccaaccccgtcca 28324312 Query: 253 gtccctcggcgacggcaccgtcggcaccgactacgccgtgcccttccgccgcctcaccgg 312 | | ||||||| ||| ||| || | |||| |||| |||||||||||||||||||||||| Sbjct: 28324313 gaacgtcggcgagggcgccggcgcctccgagtacggcgtgcccttccgccgcctcaccgg 28324372 Query: 313 ccacggccacttcgtccaggacgtcgtcatcagctccgacggccagttcgcgctctcggg 372 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 28324373 ccactcccacttcgtccaggacgtcgtcctcagctccgacggccagttcgcgctctctgg 28324432 Query: 373 ct 374 || Sbjct: 28324433 ct 28324434
>dbj|AP003452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0478H03 Length = 167560 Score = 258 bits (130), Expect = 1e-65 Identities = 214/242 (88%) Strand = Plus / Plus Query: 133 gatgcgcggccacaacgacgtggtgacggcgatcgcggcgccgatcgacaactcgcccta 192 ||||| |||||||||||||||||||||||| |||||| | || |||||||||||||| | Sbjct: 158700 gatgcacggccacaacgacgtggtgacggccatcgcgacccccatcgacaactcgccgtt 158759 Query: 193 catcgtgtccggctcccgcgacaagtcgctgctggtctgggacctcaccaacccggtcgc 252 |||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 158760 catcgtctcctcctcccgcgacaagtcgctgctggtgtgggacctcaccaaccccgtcca 158819 Query: 253 gtccctcggcgacggcaccgtcggcaccgactacgccgtgcccttccgccgcctcaccgg 312 | | ||||||| ||| ||| || | |||| |||| |||||||||||||||||||||||| Sbjct: 158820 gaacgtcggcgagggcgccggcgcctccgagtacggcgtgcccttccgccgcctcaccgg 158879 Query: 313 ccacggccacttcgtccaggacgtcgtcatcagctccgacggccagttcgcgctctcggg 372 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 158880 ccactcccacttcgtccaggacgtcgtcctcagctccgacggccagttcgcgctctctgg 158939 Query: 373 ct 374 || Sbjct: 158940 ct 158941
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0519D04 Length = 193068 Score = 258 bits (130), Expect = 1e-65 Identities = 214/242 (88%) Strand = Plus / Plus Query: 133 gatgcgcggccacaacgacgtggtgacggcgatcgcggcgccgatcgacaactcgcccta 192 ||||| |||||||||||||||||||||||| |||||| | || |||||||||||||| | Sbjct: 39293 gatgcacggccacaacgacgtggtgacggccatcgcgacccccatcgacaactcgccgtt 39352 Query: 193 catcgtgtccggctcccgcgacaagtcgctgctggtctgggacctcaccaacccggtcgc 252 |||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 39353 catcgtctcctcctcccgcgacaagtcgctgctggtgtgggacctcaccaaccccgtcca 39412 Query: 253 gtccctcggcgacggcaccgtcggcaccgactacgccgtgcccttccgccgcctcaccgg 312 | | ||||||| ||| ||| || | |||| |||| |||||||||||||||||||||||| Sbjct: 39413 gaacgtcggcgagggcgccggcgcctccgagtacggcgtgcccttccgccgcctcaccgg 39472 Query: 313 ccacggccacttcgtccaggacgtcgtcatcagctccgacggccagttcgcgctctcggg 372 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 39473 ccactcccacttcgtccaggacgtcgtcctcagctccgacggccagttcgcgctctctgg 39532 Query: 373 ct 374 || Sbjct: 39533 ct 39534
>dbj|AK121587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033037K24, full insert sequence Length = 1358 Score = 258 bits (130), Expect = 1e-65 Identities = 214/242 (88%) Strand = Plus / Plus Query: 133 gatgcgcggccacaacgacgtggtgacggcgatcgcggcgccgatcgacaactcgcccta 192 ||||| |||||||||||||||||||||||| |||||| | || |||||||||||||| | Sbjct: 137 gatgcacggccacaacgacgtggtgacggccatcgcgacccccatcgacaactcgccgtt 196 Query: 193 catcgtgtccggctcccgcgacaagtcgctgctggtctgggacctcaccaacccggtcgc 252 |||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 197 catcgtctcctcctcccgcgacaagtcgctgctggtgtgggacctcaccaaccccgtcca 256 Query: 253 gtccctcggcgacggcaccgtcggcaccgactacgccgtgcccttccgccgcctcaccgg 312 | | ||||||| ||| ||| || | |||| |||| |||||||||||||||||||||||| Sbjct: 257 gaacgtcggcgagggcgccggcgcctccgagtacggcgtgcccttccgccgcctcaccgg 316 Query: 313 ccacggccacttcgtccaggacgtcgtcatcagctccgacggccagttcgcgctctcggg 372 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 317 ccactcccacttcgtccaggacgtcgtcctcagctccgacggccagttcgcgctctctgg 376 Query: 373 ct 374 || Sbjct: 377 ct 378
>dbj|AK098893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001N15, full insert sequence Length = 1256 Score = 258 bits (130), Expect = 1e-65 Identities = 214/242 (88%) Strand = Plus / Plus Query: 133 gatgcgcggccacaacgacgtggtgacggcgatcgcggcgccgatcgacaactcgcccta 192 ||||| |||||||||||||||||||||||| |||||| | || |||||||||||||| | Sbjct: 108 gatgcacggccacaacgacgtggtgacggccatcgcgacccccatcgacaactcgccgtt 167 Query: 193 catcgtgtccggctcccgcgacaagtcgctgctggtctgggacctcaccaacccggtcgc 252 |||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 168 catcgtctcctcctcccgcgacaagtcgctgctggtgtgggacctcaccaaccccgtcca 227 Query: 253 gtccctcggcgacggcaccgtcggcaccgactacgccgtgcccttccgccgcctcaccgg 312 | | ||||||| ||| ||| || | |||| |||| |||||||||||||||||||||||| Sbjct: 228 gaacgtcggcgagggcgccggcgcctccgagtacggcgtgcccttccgccgcctcaccgg 287 Query: 313 ccacggccacttcgtccaggacgtcgtcatcagctccgacggccagttcgcgctctcggg 372 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 288 ccactcccacttcgtccaggacgtcgtcctcagctccgacggccagttcgcgctctctgg 347 Query: 373 ct 374 || Sbjct: 348 ct 349
>dbj|AK060428.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-A02, full insert sequence Length = 1351 Score = 258 bits (130), Expect = 1e-65 Identities = 214/242 (88%) Strand = Plus / Plus Query: 133 gatgcgcggccacaacgacgtggtgacggcgatcgcggcgccgatcgacaactcgcccta 192 ||||| |||||||||||||||||||||||| |||||| | || |||||||||||||| | Sbjct: 131 gatgcacggccacaacgacgtggtgacggccatcgcgacccccatcgacaactcgccgtt 190 Query: 193 catcgtgtccggctcccgcgacaagtcgctgctggtctgggacctcaccaacccggtcgc 252 |||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 191 catcgtctcctcctcccgcgacaagtcgctgctggtgtgggacctcaccaaccccgtcca 250 Query: 253 gtccctcggcgacggcaccgtcggcaccgactacgccgtgcccttccgccgcctcaccgg 312 | | ||||||| ||| ||| || | |||| |||| |||||||||||||||||||||||| Sbjct: 251 gaacgtcggcgagggcgccggcgcctccgagtacggcgtgcccttccgccgcctcaccgg 310 Query: 313 ccacggccacttcgtccaggacgtcgtcatcagctccgacggccagttcgcgctctcggg 372 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 311 ccactcccacttcgtccaggacgtcgtcctcagctccgacggccagttcgcgctctctgg 370 Query: 373 ct 374 || Sbjct: 371 ct 372
>dbj|D38231.1|RICGPBSLP Oryza sativa (japonica cultivar-group) RWD mRNA for q group of receptor for activated C-kinase, complete cds Length = 1285 Score = 258 bits (130), Expect = 1e-65 Identities = 214/242 (88%) Strand = Plus / Plus Query: 133 gatgcgcggccacaacgacgtggtgacggcgatcgcggcgccgatcgacaactcgcccta 192 ||||| |||||||||||||||||||||||| |||||| | || |||||||||||||| | Sbjct: 65 gatgcacggccacaacgacgtggtgacggccatcgcgacccccatcgacaactcgccgtt 124 Query: 193 catcgtgtccggctcccgcgacaagtcgctgctggtctgggacctcaccaacccggtcgc 252 |||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 125 catcgtctcctcctcccgcgacaagtcgctgctggtgtgggacctcaccaaccccgtcca 184 Query: 253 gtccctcggcgacggcaccgtcggcaccgactacgccgtgcccttccgccgcctcaccgg 312 | | ||||||| ||| ||| || | |||| |||| |||||||||||||||||||||||| Sbjct: 185 gaacgtcggcgagggcgccggcgcctccgagtacggcgtgcccttccgccgcctcaccgg 244 Query: 313 ccacggccacttcgtccaggacgtcgtcatcagctccgacggccagttcgcgctctcggg 372 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 245 ccactcccacttcgtccaggacgtcgtcctcagctccgacggccagttcgcgctctctgg 304 Query: 373 ct 374 || Sbjct: 305 ct 306
>dbj|AK098877.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001E12, full insert sequence Length = 1326 Score = 250 bits (126), Expect = 3e-63 Identities = 213/242 (88%) Strand = Plus / Plus Query: 133 gatgcgcggccacaacgacgtggtgacggcgatcgcggcgccgatcgacaactcgcccta 192 ||||| |||||||||||||||||||||||| |||||| | || |||||||||||||| | Sbjct: 125 gatgcacggccacaacgacgtggtgacggccatcgcgacccccatcgacaactcgccgtt 184 Query: 193 catcgtgtccggctcccgcgacaagtcgctgctggtctgggacctcaccaacccggtcgc 252 |||||| ||| |||||||||||||||||||||||| ||||||||||||||||| ||| Sbjct: 185 catcgtctcctcctcccgcgacaagtcgctgctggtgtgggacctcaccaaccccgtcca 244 Query: 253 gtccctcggcgacggcaccgtcggcaccgactacgccgtgcccttccgccgcctcaccgg 312 | | ||||||| ||| ||| || | |||| |||| |||||||||||||||||||||||| Sbjct: 245 gaacgtcggcgagggcgccggcgcctccgagtacggcgtgcccttccgccgcctcaccgg 304 Query: 313 ccacggccacttcgtccaggacgtcgtcatcagctccgacggccagttcgcgctctcggg 372 |||| |||| ||||||||||||||||| |||||||||||||||||||||||||||| || Sbjct: 305 ccactcccacctcgtccaggacgtcgtcctcagctccgacggccagttcgcgctctctgg 364 Query: 373 ct 374 || Sbjct: 365 ct 366
>ref|XM_475866.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1011 Score = 176 bits (89), Expect = 3e-41 Identities = 128/141 (90%) Strand = Plus / Plus Query: 107 caggagtcgctcaccctggtgggcacgatgcgcggccacaacgacgtggtgacggcgatc 166 ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 10 caggagtcgctcaccctggcgggcgtcctgcgcggccacaacgacatggtgacggcgatc 69 Query: 167 gcggcgccgatcgacaactcgccctacatcgtgtccggctcccgcgacaagtcgctgctg 226 ||||||||||| ||||||||||||| |||||| ||| |||||||||||||||||||||| Sbjct: 70 gcggcgccgattgacaactcgcccttcatcgtctcctcctcccgcgacaagtcgctgctg 129 Query: 227 gtctgggacctcaccaacccg 247 || |||||| ||||||||||| Sbjct: 130 gtgtgggacatcaccaacccg 150 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 298 ccgccgcctcaccggccacggccacttcgtccaggacgtcgtcatcagctccgacggcca 357 ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct: 207 ccgccgcctcaccggccactcccacttcgtccaggacgtcgtcctcagctccgacggcca 266 Query: 358 gttcgcgctctcggg 372 ||||||||||||||| Sbjct: 267 gttcgcgctctcggg 281
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 176 bits (89), Expect = 3e-41 Identities = 128/141 (90%) Strand = Plus / Minus Query: 107 caggagtcgctcaccctggtgggcacgatgcgcggccacaacgacgtggtgacggcgatc 166 ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 116422 caggagtcgctcaccctggcgggcgtcctgcgcggccacaacgacatggtgacggcgatc 116363 Query: 167 gcggcgccgatcgacaactcgccctacatcgtgtccggctcccgcgacaagtcgctgctg 226 ||||||||||| ||||||||||||| |||||| ||| |||||||||||||||||||||| Sbjct: 116362 gcggcgccgattgacaactcgcccttcatcgtctcctcctcccgcgacaagtcgctgctg 116303 Query: 227 gtctgggacctcaccaacccg 247 || |||||| ||||||||||| Sbjct: 116302 gtgtgggacatcaccaacccg 116282 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 298 ccgccgcctcaccggccacggccacttcgtccaggacgtcgtcatcagctccgacggcca 357 ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct: 116225 ccgccgcctcaccggccactcccacttcgtccaggacgtcgtcctcagctccgacggcca 116166 Query: 358 gttcgcgctctcggg 372 ||||||||||||||| Sbjct: 116165 gttcgcgctctcggg 116151
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 176 bits (89), Expect = 3e-41 Identities = 128/141 (90%) Strand = Plus / Minus Query: 107 caggagtcgctcaccctggtgggcacgatgcgcggccacaacgacgtggtgacggcgatc 166 ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 172850 caggagtcgctcaccctggcgggcgtcctgcgcggccacaacgacatggtgacggcgatc 172791 Query: 167 gcggcgccgatcgacaactcgccctacatcgtgtccggctcccgcgacaagtcgctgctg 226 ||||||||||| ||||||||||||| |||||| ||| |||||||||||||||||||||| Sbjct: 172790 gcggcgccgattgacaactcgcccttcatcgtctcctcctcccgcgacaagtcgctgctg 172731 Query: 227 gtctgggacctcaccaacccg 247 || |||||| ||||||||||| Sbjct: 172730 gtgtgggacatcaccaacccg 172710 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 298 ccgccgcctcaccggccacggccacttcgtccaggacgtcgtcatcagctccgacggcca 357 ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct: 172653 ccgccgcctcaccggccactcccacttcgtccaggacgtcgtcctcagctccgacggcca 172594 Query: 358 gttcgcgctctcggg 372 ||||||||||||||| Sbjct: 172593 gttcgcgctctcggg 172579
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 176 bits (89), Expect = 3e-41 Identities = 128/141 (90%) Strand = Plus / Minus Query: 107 caggagtcgctcaccctggtgggcacgatgcgcggccacaacgacgtggtgacggcgatc 166 ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 27241454 caggagtcgctcaccctggcgggcgtcctgcgcggccacaacgacatggtgacggcgatc 27241395 Query: 167 gcggcgccgatcgacaactcgccctacatcgtgtccggctcccgcgacaagtcgctgctg 226 ||||||||||| ||||||||||||| |||||| ||| |||||||||||||||||||||| Sbjct: 27241394 gcggcgccgattgacaactcgcccttcatcgtctcctcctcccgcgacaagtcgctgctg 27241335 Query: 227 gtctgggacctcaccaacccg 247 || |||||| ||||||||||| Sbjct: 27241334 gtgtgggacatcaccaacccg 27241314 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Minus Query: 298 ccgccgcctcaccggccacggccacttcgtccaggacgtcgtcatcagctccgacggcca 357 ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct: 27241257 ccgccgcctcaccggccactcccacttcgtccaggacgtcgtcctcagctccgacggcca 27241198 Query: 358 gttcgcgctctcggg 372 ||||||||||||||| Sbjct: 27241197 gttcgcgctctcggg 27241183
>dbj|AK121567.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034P13, full insert sequence Length = 1385 Score = 176 bits (89), Expect = 3e-41 Identities = 128/141 (90%) Strand = Plus / Plus Query: 107 caggagtcgctcaccctggtgggcacgatgcgcggccacaacgacgtggtgacggcgatc 166 ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 85 caggagtcgctcaccctggcgggcgtcctgcgcggccacaacgacatggtgacggcgatc 144 Query: 167 gcggcgccgatcgacaactcgccctacatcgtgtccggctcccgcgacaagtcgctgctg 226 ||||||||||| ||||||||||||| |||||| ||| |||||||||||||||||||||| Sbjct: 145 gcggcgccgattgacaactcgcccttcatcgtctcctcctcccgcgacaagtcgctgctg 204 Query: 227 gtctgggacctcaccaacccg 247 || |||||| ||||||||||| Sbjct: 205 gtgtgggacatcaccaacccg 225 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 298 ccgccgcctcaccggccacggccacttcgtccaggacgtcgtcatcagctccgacggcca 357 ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct: 282 ccgccgcctcaccggccactcccacttcgtccaggacgtcgtcctcagctccgacggcca 341 Query: 358 gttcgcgctctcggg 372 ||||||||||||||| Sbjct: 342 gttcgcgctctcggg 356
>dbj|AK065272.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002L07, full insert sequence Length = 1227 Score = 176 bits (89), Expect = 3e-41 Identities = 128/141 (90%) Strand = Plus / Plus Query: 107 caggagtcgctcaccctggtgggcacgatgcgcggccacaacgacgtggtgacggcgatc 166 ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 78 caggagtcgctcaccctggcgggcgtcctgcgcggccacaacgacatggtgacggcgatc 137 Query: 167 gcggcgccgatcgacaactcgccctacatcgtgtccggctcccgcgacaagtcgctgctg 226 ||||||||||| ||||||||||||| |||||| ||| |||||||||||||||||||||| Sbjct: 138 gcggcgccgattgacaactcgcccttcatcgtctcctcctcccgcgacaagtcgctgctg 197 Query: 227 gtctgggacctcaccaacccg 247 || |||||| ||||||||||| Sbjct: 198 gtgtgggacatcaccaacccg 218 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 298 ccgccgcctcaccggccacggccacttcgtccaggacgtcgtcatcagctccgacggcca 357 ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct: 275 ccgccgcctcaccggccactcccacttcgtccaggacgtcgtcctcagctccgacggcca 334 Query: 358 gttcgcgctctcggg 372 ||||||||||||||| Sbjct: 335 gttcgcgctctcggg 349
>dbj|AK062179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-D07, full insert sequence Length = 1412 Score = 176 bits (89), Expect = 3e-41 Identities = 128/141 (90%) Strand = Plus / Plus Query: 107 caggagtcgctcaccctggtgggcacgatgcgcggccacaacgacgtggtgacggcgatc 166 ||||||||||||||||||| |||| ||||||||||||||||| |||||||||||||| Sbjct: 87 caggagtcgctcaccctggcgggcgtcctgcgcggccacaacgacatggtgacggcgatc 146 Query: 167 gcggcgccgatcgacaactcgccctacatcgtgtccggctcccgcgacaagtcgctgctg 226 ||||||||||| ||||||||||||| |||||| ||| |||||||||||||||||||||| Sbjct: 147 gcggcgccgattgacaactcgcccttcatcgtctcctcctcccgcgacaagtcgctgctg 206 Query: 227 gtctgggacctcaccaacccg 247 || |||||| ||||||||||| Sbjct: 207 gtgtgggacatcaccaacccg 227 Score = 125 bits (63), Expect = 1e-25 Identities = 72/75 (96%) Strand = Plus / Plus Query: 298 ccgccgcctcaccggccacggccacttcgtccaggacgtcgtcatcagctccgacggcca 357 ||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct: 284 ccgccgcctcaccggccactcccacttcgtccaggacgtcgtcctcagctccgacggcca 343 Query: 358 gttcgcgctctcggg 372 ||||||||||||||| Sbjct: 344 gttcgcgctctcggg 358
>gb|BT016269.1| Zea mays clone Contig102 mRNA sequence Length = 1254 Score = 168 bits (85), Expect = 8e-39 Identities = 130/145 (89%) Strand = Plus / Plus Query: 106 gcaggagtcgctcaccctggtgggcacgatgcgcggccacaacgacgtggtgacggcgat 165 ||||||||| ||| | |||||||||||||||||||||||||||| || |||||||||||| Sbjct: 78 gcaggagtccctctctctggtgggcacgatgcgcggccacaacggcgaggtgacggcgat 137 Query: 166 cgcggcgccgatcgacaactcgccctacatcgtgtccggctcccgcgacaagtcgctgct 225 |||| | ||||||||||||||||| | |||||| ||| ||||||||||||||| ||||| Sbjct: 138 cgcgaccccgatcgacaactcgccgttcatcgtctcctcctcccgcgacaagtccctgct 197 Query: 226 ggtctgggacctcaccaacccggtc 250 ||| |||||||| |||||||||||| Sbjct: 198 ggtgtgggacctgaccaacccggtc 222 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 279 ccgactacgccgtgcccttccgccgcctcaccggccacggccacttcgtccaggacgtcg 338 ||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 251 ccgactacggcgtccccttccgccgcctcaccggccactcccacttcgtccaggacgtcg 310 Query: 339 tcatcagctccgacggccagttcgc 363 || |||| ||||||||||||||||| Sbjct: 311 tcctcagttccgacggccagttcgc 335
>gb|AY103919.1| Zea mays PCO099246 mRNA sequence Length = 1461 Score = 168 bits (85), Expect = 8e-39 Identities = 130/145 (89%) Strand = Plus / Plus Query: 106 gcaggagtcgctcaccctggtgggcacgatgcgcggccacaacgacgtggtgacggcgat 165 ||||||||| ||| | |||||||||||||||||||||||||||| || |||||||||||| Sbjct: 235 gcaggagtccctctctctggtgggcacgatgcgcggccacaacggcgaggtgacggcgat 294 Query: 166 cgcggcgccgatcgacaactcgccctacatcgtgtccggctcccgcgacaagtcgctgct 225 |||| | ||||||||||||||||| | |||||| ||| ||||||||||||||| ||||| Sbjct: 295 cgcgaccccgatcgacaactcgccgttcatcgtctcctcctcccgcgacaagtccctgct 354 Query: 226 ggtctgggacctcaccaacccggtc 250 ||| |||||||| |||||||||||| Sbjct: 355 ggtgtgggacctgaccaacccggtc 379 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 279 ccgactacgccgtgcccttccgccgcctcaccggccacggccacttcgtccaggacgtcg 338 ||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 408 ccgactacggcgtccccttccgccgcctcaccggccactcccacttcgtccaggacgtcg 467 Query: 339 tcatcagctccgacggccagttcgc 363 || |||| ||||||||||||||||| Sbjct: 468 tcctcagttccgacggccagttcgc 492
>gb|BT017990.1| Zea mays clone EL01N0526B03.c mRNA sequence Length = 1281 Score = 161 bits (81), Expect = 2e-36 Identities = 129/145 (88%) Strand = Plus / Plus Query: 106 gcaggagtcgctcaccctggtgggcacgatgcgcggccacaacgacgtggtgacggcgat 165 ||||||||| ||| | ||||||||||||||| |||||||||||| || |||||||||||| Sbjct: 87 gcaggagtccctctctctggtgggcacgatgtgcggccacaacggcgaggtgacggcgat 146 Query: 166 cgcggcgccgatcgacaactcgccctacatcgtgtccggctcccgcgacaagtcgctgct 225 |||| | ||||||||||||||||| | |||||| ||| ||||||||||||||| ||||| Sbjct: 147 cgcgaccccgatcgacaactcgccgttcatcgtctcctcctcccgcgacaagtccctgct 206 Query: 226 ggtctgggacctcaccaacccggtc 250 ||| |||||||| |||||||||||| Sbjct: 207 ggtgtgggacctgaccaacccggtc 231 Score = 121 bits (61), Expect = 2e-24 Identities = 79/85 (92%) Strand = Plus / Plus Query: 279 ccgactacgccgtgcccttccgccgcctcaccggccacggccacttcgtccaggacgtcg 338 ||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 260 ccgactacggcgtccccttccgccgcctcaccggccactcccacttcgtccaggacgtcg 319 Query: 339 tcatcagctccgacggccagttcgc 363 || |||| ||||||||||||||||| Sbjct: 320 tcctcagttccgacggccagttcgc 344
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 155 bits (78), Expect = 1e-34 Identities = 127/142 (89%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 107 caggagtcgctcaccctggtgggcacgatgcgcggccacaacgacgtggtgacggcgatc 166 ||||||||||||||||||| |||| ||||||||| ||| ||| |||||||||||||| Sbjct: 10003401 caggagtcgctcaccctggcgggcgtcttgcgcggccgcaatgacatggtgacggcgatc 10003460 Query: 167 gcggcgccgatcgacaactcgccctacatcgtgtccggctccc-gcgacaagtcgctgct 225 ||||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||| Sbjct: 10003461 gcggcgccgatcgacaactcgcccttcatcgtctcctcctccctgcgacaagtcgctgct 10003520 Query: 226 ggtctgggacctcaccaacccg 247 ||| |||||| ||||||||||| Sbjct: 10003521 ggtgtgggacatcaccaacccg 10003542
>gb|AC137075.2| Genomic sequence for Oryza sativa, Nipponbare striain, clone OSJNBb0027B12, from chromosome 3, complete sequence Length = 127426 Score = 155 bits (78), Expect = 1e-34 Identities = 127/142 (89%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 107 caggagtcgctcaccctggtgggcacgatgcgcggccacaacgacgtggtgacggcgatc 166 ||||||||||||||||||| |||| ||||||||| ||| ||| |||||||||||||| Sbjct: 53317 caggagtcgctcaccctggcgggcgtcttgcgcggccgcaatgacatggtgacggcgatc 53376 Query: 167 gcggcgccgatcgacaactcgccctacatcgtgtccggctccc-gcgacaagtcgctgct 225 ||||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||| Sbjct: 53377 gcggcgccgatcgacaactcgcccttcatcgtctcctcctccctgcgacaagtcgctgct 53436 Query: 226 ggtctgggacctcaccaacccg 247 ||| |||||| ||||||||||| Sbjct: 53437 ggtgtgggacatcaccaacccg 53458
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 155 bits (78), Expect = 1e-34 Identities = 127/142 (89%), Gaps = 1/142 (0%) Strand = Plus / Plus Query: 107 caggagtcgctcaccctggtgggcacgatgcgcggccacaacgacgtggtgacggcgatc 166 ||||||||||||||||||| |||| ||||||||| ||| ||| |||||||||||||| Sbjct: 10001522 caggagtcgctcaccctggcgggcgtcttgcgcggccgcaatgacatggtgacggcgatc 10001581 Query: 167 gcggcgccgatcgacaactcgccctacatcgtgtccggctccc-gcgacaagtcgctgct 225 ||||||||||||||||||||||||| |||||| ||| ||||| |||||||||||||||| Sbjct: 10001582 gcggcgccgatcgacaactcgcccttcatcgtctcctcctccctgcgacaagtcgctgct 10001641 Query: 226 ggtctgggacctcaccaacccg 247 ||| |||||| ||||||||||| Sbjct: 10001642 ggtgtgggacatcaccaacccg 10001663
>gb|BT016705.1| Zea mays clone Contig538 mRNA sequence Length = 1265 Score = 153 bits (77), Expect = 5e-34 Identities = 128/145 (88%) Strand = Plus / Plus Query: 106 gcaggagtcgctcaccctggtgggcacgatgcgcggccacaacgacgtggtgacggcgat 165 ||||||||| ||| ||||||||||||||||||||||||| |||| || |||||||||||| Sbjct: 78 gcaggagtccctctccctggtgggcacgatgcgcggccataacggcgaggtgacggcgat 137 Query: 166 cgcggcgccgatcgacaactcgccctacatcgtgtccggctcccgcgacaagtcgctgct 225 |||| | ||||||||||||||||| | |||||| ||| |||||| |||||||| |||| Sbjct: 138 cgcgaccccgatcgacaactcgcctttcatcgtctcctcctcccgggacaagtccgtgct 197 Query: 226 ggtctgggacctcaccaacccggtc 250 ||| |||||||| |||||||||||| Sbjct: 198 ggtgtgggacctgaccaacccggtc 222 Score = 119 bits (60), Expect = 7e-24 Identities = 87/96 (90%) Strand = Plus / Plus Query: 279 ccgactacgccgtgcccttccgccgcctcaccggccacggccacttcgtccaggacgtcg 338 ||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 251 ccgactacggcgtccccttccgccgcctcaccggccactcccacttcgtccaggacgtcg 310 Query: 339 tcatcagctccgacggccagttcgcgctctcgggct 374 || | || ||||||||||||||||| ||||| |||| Sbjct: 311 tccttagttccgacggccagttcgcactctctggct 346
>ref|XM_481173.1| Oryza sativa (japonica cultivar-group), mRNA Length = 552 Score = 125 bits (63), Expect = 1e-25 Identities = 99/111 (89%) Strand = Plus / Plus Query: 135 tgcgcggccacaacgacgtggtgacggcgatcgcggcgccgatcgacaactcgccctaca 194 ||||||||||||||||| |||| | ||| ||||||||||||||||||| ||||||| || Sbjct: 14 tgcgcggccacaacgacatggtcatggcaatcgcggcgccgatcgacatctcgcccctca 73 Query: 195 tcgtgtccggctcccgcgacaagtcgctgctggtctgggacctcaccaacc 245 |||| ||| |||||||||||||||||||||||| |||||| ||||||||| Sbjct: 74 tcgtctcctcctcccgcgacaagtcgctgctggtgtgggacatcaccaacc 124
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 125 bits (63), Expect = 1e-25 Identities = 99/111 (89%) Strand = Plus / Minus Query: 135 tgcgcggccacaacgacgtggtgacggcgatcgcggcgccgatcgacaactcgccctaca 194 ||||||||||||||||| |||| | ||| ||||||||||||||||||| ||||||| || Sbjct: 10365583 tgcgcggccacaacgacatggtcatggcaatcgcggcgccgatcgacatctcgcccctca 10365524 Query: 195 tcgtgtccggctcccgcgacaagtcgctgctggtctgggacctcaccaacc 245 |||| ||| |||||||||||||||||||||||| |||||| ||||||||| Sbjct: 10365523 tcgtctcctcctcccgcgacaagtcgctgctggtgtgggacatcaccaacc 10365473
>dbj|AP005731.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091D16 Length = 174222 Score = 125 bits (63), Expect = 1e-25 Identities = 99/111 (89%) Strand = Plus / Minus Query: 135 tgcgcggccacaacgacgtggtgacggcgatcgcggcgccgatcgacaactcgccctaca 194 ||||||||||||||||| |||| | ||| ||||||||||||||||||| ||||||| || Sbjct: 66541 tgcgcggccacaacgacatggtcatggcaatcgcggcgccgatcgacatctcgcccctca 66482 Query: 195 tcgtgtccggctcccgcgacaagtcgctgctggtctgggacctcaccaacc 245 |||| ||| |||||||||||||||||||||||| |||||| ||||||||| Sbjct: 66481 tcgtctcctcctcccgcgacaagtcgctgctggtgtgggacatcaccaacc 66431
>dbj|D29704.1|RICYK16 Oryza sativa mRNA, partial homologous to G-protein beta-subunit-like polypeptide gene Length = 175 Score = 89.7 bits (45), Expect = 6e-15 Identities = 67/75 (89%) Strand = Plus / Plus Query: 298 ccgccgcctcaccggccacggccacttcgtccaggacgtcgtcatcagctccgacggcca 357 ||| ||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| Sbjct: 85 ccgncgccttaccggccactcccacttcgtccaggacgtcgtcctcagctccgacggcca 144 Query: 358 gttcgcgctctcggg 372 |||| | ||||||| Sbjct: 145 attcgagntctcggg 159 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 219 cgctgctggtctgggacctcaccaacccg 247 |||||||||| |||||| ||||||||||| Sbjct: 1 cgctgctggtgtgggacatcaccaacccg 29
>emb|Z72388.1|NPGPROTB N.plumbaginifolia mRNA for G protein beta-subunit-like protein Length = 1261 Score = 61.9 bits (31), Expect = 1e-06 Identities = 40/43 (93%) Strand = Plus / Plus Query: 298 ccgccgcctcaccggccacggccacttcgtccaggacgtcgtc 340 |||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 244 ccgccgtctcactggccacggccacttcgtccaggatgtcgtc 286
>gb|U44850.1|GMU44850 Glycine max G beta-like protein mRNA, complete cds Length = 988 Score = 58.0 bits (29), Expect = 2e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 298 ccgccgcctcaccggccacggccacttcgtccaggacgtcgtcatcagctccgacggcca 357 ||||||||||||||| || ||||||||||||||||||||| || |||||||| || Sbjct: 172 ccgccgcctcaccggacattctcacttcgtccaggacgtcgtcctctcatccgacggtca 231 Query: 358 gttcgcgctctcgggct 374 |||||| ||||| |||| Sbjct: 232 gttcgccctctccggct 248 Score = 42.1 bits (21), Expect = 1.3 Identities = 45/53 (84%) Strand = Plus / Plus Query: 134 atgcgcggccacaacgacgtggtgacggcgatcgcggcgccgatcgacaactc 186 ||||||| ||||| |||||| ||||||||||| || | || ||||||||||| Sbjct: 35 atgcgcgcccacaccgacgtcgtgacggcgattgccactcccatcgacaactc 87
>emb|AJ004807.1|NTAJ4807 Nicotiana tabacum xanthi arcA 3 gene, partial Length = 1076 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 298 ccgccgcctcaccggccacggccacttcgtccaggacgtcgtc 340 ||||||||| || ||||||||||| |||||||| ||||||||| Sbjct: 66 ccgccgccttactggccacggccatttcgtccaagacgtcgtc 108
>emb|Z33643.1|BNGNRPR B.napus (Naehan) bgb1 mRNA for guanine nucleotide regulatory protein Length = 1196 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 305 ctcaccggccacggccacttcgtccaggacgtcgtcatcagctccgacggccagttcgcg 364 |||||||||||| ||||||||| | ||||||||| || |||||||||||| |||||| Sbjct: 198 ctcaccggccactcccacttcgtggaagacgtcgtcctctcctccgacggccaattcgcg 257 Query: 365 ct 366 || Sbjct: 258 ct 259
>dbj|AB246881.1| Lethenteron japonicum GNB2L1 mRNA for guanine nucleotide binding protein beta polypeptide 2-like 1, complete cds Length = 1211 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 332 gacgtcgtcatcagctccgacggccagttcgcgctctcggg 372 ||||||||||| |||||||||||||||||| |||||||| Sbjct: 290 gacgtcgtcatttcctccgacggccagttcgccctctcggg 330
>gb|AY130394.1| Petromyzon marinus guanine nucleotide-binding protein mRNA, complete cds Length = 954 Score = 50.1 bits (25), Expect = 0.005 Identities = 28/29 (96%) Strand = Plus / Plus Query: 346 ctccgacggccagttcgcgctctcgggct 374 |||||||||||||||||| |||||||||| Sbjct: 216 ctccgacggccagttcgccctctcgggct 244
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 300 gccgcctcaccggccacggcca 321 |||||||||||||||||||||| Sbjct: 2934332 gccgcctcaccggccacggcca 2934311
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 44.1 bits (22), Expect = 0.32 Identities = 22/22 (100%) Strand = Plus / Minus Query: 145 caacgacgtggtgacggcgatc 166 |||||||||||||||||||||| Sbjct: 1588901 caacgacgtggtgacggcgatc 1588880
>ref|XM_472195.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1683 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 tcgcgtccctcggcgacggcaccgt 273 |||||| |||||||||||||||||| Sbjct: 992 tcgcgtgcctcggcgacggcaccgt 1016
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 cggcgatcgcggcgccgatcg 179 ||||||||||||||||||||| Sbjct: 1689187 cggcgatcgcggcgccgatcg 1689207
>ref|XM_871020.1| PREDICTED: Bos taurus similar to signal peptide, CUB domain, EGF-like 1 (LOC618695), mRNA Length = 1572 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 300 gccgcctcaccggccacggcc 320 ||||||||||||||||||||| Sbjct: 1118 gccgcctcaccggccacggcc 1138
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 333 acgtcgtcatcagctccgacggccagttc 361 ||||||||||||||||||| || |||||| Sbjct: 1976008 acgtcgtcatcagctccgagggacagttc 1975980
>emb|X02724.1|SSUPAR Porcine mRNA for plasminogen activator Length = 2375 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 agtcgctcaccctggtgggca 131 ||||||||||||||||||||| Sbjct: 1597 agtcgctcaccctggtgggca 1577
>emb|X01648.1|SSUPAG Porcine gene for plasminogen activator Length = 7143 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 agtcgctcaccctggtgggca 131 ||||||||||||||||||||| Sbjct: 6048 agtcgctcaccctggtgggca 6028
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 tcgcgtccctcggcgacggcaccgt 273 |||||| |||||||||||||||||| Sbjct: 18389774 tcgcgtgcctcggcgacggcaccgt 18389798
>ref|NM_213945.1| Sus scrofa plasminogen activator (PLAU), mRNA Length = 2375 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 agtcgctcaccctggtgggca 131 ||||||||||||||||||||| Sbjct: 1597 agtcgctcaccctggtgggca 1577
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 160 ggcgatcgcggcgccgatcga 180 ||||||||||||||||||||| Sbjct: 7952323 ggcgatcgcggcgccgatcga 7952343
>gb|AY547291.1| Toxoplasma gondii receptor for activated C kinase 1 (RACK1) mRNA, complete cds Length = 966 Score = 42.1 bits (21), Expect = 1.3 Identities = 36/41 (87%) Strand = Plus / Plus Query: 329 caggacgtcgtcatcagctccgacggccagttcgcgctctc 369 ||||||||||| |||| | ||||||||||||||| ||||| Sbjct: 214 caggacgtcgtgatcaacagcgacggccagttcgcactctc 254
>emb|AL607003.3|OSJN00130 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0006N15, complete sequence Length = 133413 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 tcgcgtccctcggcgacggcaccgt 273 |||||| |||||||||||||||||| Sbjct: 91697 tcgcgtgcctcggcgacggcaccgt 91721
>gb|BT012967.1| Lycopersicon esculentum clone 114159R, mRNA sequence Length = 1324 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 298 ccgccgcctcaccggccacggccacttcgtccagga 333 |||||| ||||| |||||||||||||| || ||||| Sbjct: 249 ccgccgtctcacaggccacggccactttgttcagga 284
>gb|AY445148.1| Anabaena circinalis clone FP72 unknown DNA sequence Length = 219 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 151 cgtggtgacggcgatcgcggcgccgatc 178 |||||||||||||||| || |||||||| Sbjct: 77 cgtggtgacggcgatctcgtcgccgatc 104
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 135 tgcgcggccacaacgacgtggtga 158 ||||||||| |||||||||||||| Sbjct: 2376066 tgcgcggccgcaacgacgtggtga 2376089
>ref|XM_503221.1| Yarrowia lipolytica CLIB122, YALI0D24189g predicted mRNA Length = 4137 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 acatgcaggagtcgctcacc 121 |||||||||||||||||||| Sbjct: 2927 acatgcaggagtcgctcacc 2946
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 154 ggtgacggcgatcgcggcgccgat 177 ||||||||||||| |||||||||| Sbjct: 56661 ggtgacggcgatctcggcgccgat 56684
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cgatcgcggcgccgatcgac 181 |||||||||||||||||||| Sbjct: 17865 cgatcgcggcgccgatcgac 17846
>gb|AC084750.3| Homo sapiens BAC clone RP11-215J17 from 4, complete sequence Length = 154693 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ctggtctgggacctcaccaa 243 |||||||||||||||||||| Sbjct: 92802 ctggtctgggacctcaccaa 92821
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 309 ccggccacggccacttcgtccagg 332 |||||||||||||||||| ||||| Sbjct: 931548 ccggccacggccacttcggccagg 931525
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 159 cggcgatcgcggcgccgatcgaca 182 |||||||||||||| ||||||||| Sbjct: 2839640 cggcgatcgcggcgacgatcgaca 2839663
>gb|DQ066296.1| Ixodes scapularis isolate is-all-382 guanine nucleotide-binding protein mRNA, complete cds Length = 957 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 311 ggccacggccacttcgtccaggacgtcgtcat 342 |||||||||||||||||| |||||| ||||| Sbjct: 181 ggccacggccacttcgtcacggacgtggtcat 212
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 258 tcggcgacggcaccgtcggcaccg 281 ||||||||||||||| |||||||| Sbjct: 4334100 tcggcgacggcaccggcggcaccg 4334077
>dbj|AB022687.1| Lycopersicon esculentum mRNA for LeArcA2 protein, complete cds Length = 1115 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 298 ccgccgcctcaccggccacggccacttcgtccagga 333 |||||| ||||| |||||||||||||| || ||||| Sbjct: 214 ccgccgtctcacaggccacggccactttgttcagga 249
>gb|AC135012.2| Homo sapiens chromosome 16 clone RP11-805I24, complete sequence Length = 157630 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 ctgctggtctgggacctcac 240 |||||||||||||||||||| Sbjct: 118210 ctgctggtctgggacctcac 118229
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 301 ccgcctcaccggccacggcc 320 |||||||||||||||||||| Sbjct: 2038769 ccgcctcaccggccacggcc 2038788
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 159 cggcgatcgcggcgccgatc 178 |||||||||||||||||||| Sbjct: 1107255 cggcgatcgcggcgccgatc 1107274
>emb|X94657.1|HSFACEX11 H.sapiens FAC gene exon 11 Length = 473 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 224 ctggtctgggacctcaccaa 243 |||||||||||||||||||| Sbjct: 431 ctggtctgggacctcaccaa 450
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica Length = 3633272 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 acatgcaggagtcgctcacc 121 |||||||||||||||||||| Sbjct: 3191888 acatgcaggagtcgctcacc 3191907
>dbj|D17526.1|TOBARCA Tobacco mRNA for G protein beta subunit-like protein (ArcA) Length = 1296 Score = 40.1 bits (20), Expect = 5.0 Identities = 32/36 (88%) Strand = Plus / Plus Query: 305 ctcaccggccacggccacttcgtccaggacgtcgtc 340 ||||||||||| ||||| ||||| || ||||||||| Sbjct: 210 ctcaccggccatggccatttcgttcaagacgtcgtc 245 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,517,341 Number of Sequences: 3902068 Number of extensions: 1517341 Number of successful extensions: 33306 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 31926 Number of HSP's gapped (non-prelim): 1357 length of query: 374 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 352 effective length of database: 17,147,199,772 effective search space: 6035814319744 effective search space used: 6035814319744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
