Clone Information

BLAST Search Result

Clone Name	baet70c07
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	T2_MOUSE (Q06666) Octapeptide-repeat protein T2	40	0.002
2	FILA_HUMAN (P20930) Filaggrin	37	0.033
3	MYS_PODCA (Q05000) Myosin heavy chain (Fragment)	36	0.043
4	K0853_HUMAN (Q5T200) Protein KIAA0853	35	0.074
5	NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA p...	34	0.22
6	CYP1_BRUMA (Q27450) Peptidyl-prolyl cis-trans isomerase 1 (EC 5....	33	0.28
7	CAC1B_RAT (Q02294) Voltage-dependent N-type calcium channel alph...	33	0.48
8	BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-)...	32	0.63
9	CAC1B_MOUSE (O55017) Voltage-dependent N-type calcium channel al...	32	0.82
10	SPEG_HUMAN (Q15772) Striated muscle preferentially expressed pro...	31	1.4
11	FILA_MOUSE (P11088) Filaggrin (Fragment)	31	1.4
12	DP13A_MOUSE (Q8K3H0) DCC-interacting protein 13 alpha (Dip13 alp...	31	1.4
13	TRHY_RABIT (P37709) Trichohyalin	31	1.4
14	LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-bind...	31	1.4
15	RPC1_YEAST (P04051) DNA-directed RNA polymerase III largest subu...	31	1.8
16	RS3_CORJK (Q4JT53) 30S ribosomal protein S3	30	2.4
17	SVIL_MOUSE (Q8K4L3) Supervillin (Archvillin) (p205/p250)	30	2.4
18	PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helica...	30	3.1
19	IF2_BURS3 (Q39H30) Translation initiation factor IF-2	30	3.1
20	TCF20_HUMAN (Q9UGU0) Transcription factor 20 (Stromelysin 1 PDGF...	30	4.1
21	TWST1_CALJA (Q8MIH1) Twist-related protein 1	30	4.1
22	RFC1_YEAST (P38630) Activator 1 95 kDa subunit (Replication fact...	30	4.1
23	PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helica...	30	4.1
24	AN32E_MOUSE (P97822) Acidic leucine-rich nuclear phosphoprotein ...	30	4.1
25	HORN_HUMAN (Q86YZ3) Hornerin	30	4.1
26	GLMM_SILPO (Q5LTP9) Phosphoglucosamine mutase (EC 5.4.2.10)	29	5.3
27	BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-)...	29	5.3
28	DP13A_HUMAN (Q9UKG1) DCC-interacting protein 13 alpha (Dip13 alp...	29	5.3
29	SFR17_HUMAN (Q8TF01) Splicing factor, arginine/serine-rich 130 (...	29	5.3
30	V120_EHV1V (P84405) Capsid assembly protein 23	29	5.3
31	V120_EHV1B (P28956) Capsid assembly protein 23	29	5.3
32	TNNI_CHLNI (Q7M3Y3) Troponin I (TnI)	29	5.3
33	TWST1_PANTR (Q8MI03) Twist-related protein 1	29	6.9
34	TWST1_MACTO (Q7JGP2) Twist-related protein 1	29	6.9
35	TWST1_GORGO (Q8MI06) Twist-related protein 1	29	6.9
36	SPEG_RAT (Q63638) Striated muscle-specific serine/threonine prot...	29	6.9
37	TWST1_HUMAN (Q15672) Twist-related protein 1 (H-twist)	29	6.9
38	TF65_HUMAN (Q04206) Transcription factor p65 (Nuclear factor NF-...	29	6.9
39	TWST1_EULFU (Q8MIF3) Twist-related protein 1	29	6.9
40	TWST1_HYLCO (Q8MIE7) Twist-related protein 1	29	6.9
41	PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)	29	6.9
42	TRH_ONCNE (Q8QFQ9) Thyroliberin type A precursor [Contains: Prot...	29	6.9
43	CVCA_PEA (P13915) Convicilin precursor	28	9.1
44	RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats pro...	28	9.1
45	RBM25_HUMAN (P49756) Probable RNA-binding protein 25 (RNA-bindin...	28	9.1
46	NOLB_RHIFR (P33208) Nodulation protein nolB	28	9.1
47	GCP60_HUMAN (Q9H3P7) Golgi resident protein GCP60 (Acyl-CoA-bind...	28	9.1
48	TRHY_HUMAN (Q07283) Trichohyalin	28	9.1
49	RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats prote...	28	9.1
50	RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats pro...	28	9.1
51	GLB1_MAIZE (P15590) Globulin-1 S allele precursor (GLB1-S) (7S-l...	28	9.1
52	SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine pr...	28	9.1

>T2_MOUSE (Q06666) Octapeptide-repeat protein T2|
          Length = 185

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 8/117 (6%)
 Frame = -2

Query: 462 ERQSGRHRMVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDE----AGSR 295
           ERQ GR R  E++      + +   G   E  R+R +  ER  +RQ+ER  E      + 
Sbjct: 69  ERQRGRERGREVERHRRGREAERQRGREREAERQRGREAEREAERQRERQRERQRGREAE 128

Query: 294 HARGREEEALLNVVA-REHGHVGDG---QLEVSNRLSALRQNQMLGDHGDGRRWRAR 136
             RGRE E      A ++ G    G   + E   R   +RQ     + G G+R R R
Sbjct: 129 RQRGREAERQRGREAEKQRGERQRGREVEAEAEGRGRGMRQEAEATEQGQGQRQRQR 185

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>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 36.6 bits (83), Expect = 0.033
 Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 5/118 (4%)
 Frame = -2

Query: 465  GERQSGRHRMVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHAR 286
            G + S   + V+  G   +        ER + SR +      + Q + E+    GSRH+ 
Sbjct: 1823 GRQGSHYEQSVDSSGHSGSHHSHTTSQERSDVSRGQSGSRSVSRQTRNEKQSGDGSRHSG 1882

Query: 285  GREEEALLNVVAREHGHVGDGQLE----VSNRLSALRQNQMLGDHG-DGRRWRARANQ 127
             R  EA     +  H  VG GQ        N+ S++ Q+     H  D  RW   A++
Sbjct: 1883 SRHHEASSRADSSRHSQVGQGQSSGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSASR 1940



 Score = 33.5 bits (75), Expect = 0.28
 Identities = 27/118 (22%), Positives = 41/118 (34%), Gaps = 5/118 (4%)
 Frame = -2

Query: 465  GERQSGRHRMVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHAR 286
            G + S   + V+  G   +         R + SR +      +   + E     GSRH+ 
Sbjct: 851  GRQGSHHEQSVDRSGHSGSHHSHTTSQGRSDASRGQSGSRSASRTTRNEEQSRDGSRHSG 910

Query: 285  GREEEALLNVVAREHGHVGDGQLEVSNR-----LSALRQNQMLGDHGDGRRWRARANQ 127
             R  EA  +     H   G GQ E S        S  + +   G   D  RW   A++
Sbjct: 911  SRHHEASSHADISRHSQAGQGQSEGSRTSRRQGSSVSQDSDSEGHSEDSERWSGSASR 968



 Score = 32.3 bits (72), Expect = 0.63
 Identities = 29/119 (24%), Positives = 43/119 (36%), Gaps = 6/119 (5%)
 Frame = -2

Query: 465 GERQSGRHRM-VELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHA 289
           G RQ   H   V   G   +         R + S  +      + Q + E     G+RH+
Sbjct: 525 GGRQGSHHEQSVNRSGHSGSHHSHTTSQGRSDASHGQSGSRSASRQTRNEEQSGDGTRHS 584

Query: 288 RGREEEALLNVVAREHGHVGDGQLE----VSNRLSALRQNQMLGDHG-DGRRWRARANQ 127
             R  EA     +  H  VG GQ        N+ S++ Q+     H  D  RW   A++
Sbjct: 585 GSRHHEASSQADSSRHSQVGQGQSSGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSASR 643



 Score = 31.2 bits (69), Expect = 1.4
 Identities = 28/118 (23%), Positives = 43/118 (36%), Gaps = 5/118 (4%)
 Frame = -2

Query: 465  GERQSGRHRMVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHAR 286
            G + S   ++V+  G   +         R + S         + Q + +     GSRH+ 
Sbjct: 2472 GRQGSHYEQLVDRSGHSGSHHSHTTSQGRSDASHGHSGSRSASRQTRNDEQSGDGSRHSG 2531

Query: 285  GREEEALLNVVAREHGHVGDGQLE----VSNRLSALRQNQMLGDHG-DGRRWRARANQ 127
             R  EA     +  H  VG GQ E      N  S+  Q+     H  D  RW   A++
Sbjct: 2532 SRHHEASSRADSSGHSQVGQGQSEGPRTSRNWGSSFSQDSDSQGHSEDSERWSGSASR 2589



 Score = 29.3 bits (64), Expect = 5.3
 Identities = 23/78 (29%), Positives = 29/78 (37%)
 Frame = -2

Query: 468  VGERQSGRHRMVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHA 289
            VG+ QS   R     G  V+ D D+     D   R         G  Q++  D  GSRH 
Sbjct: 2225 VGQGQSSGPRTSRPRGSSVSQDSDSEGHSEDSERRSGSASRNHHGSAQEQSRD--GSRHP 2282

Query: 288  RGREEEALLNVVAREHGH 235
            R   E+         HGH
Sbjct: 2283 RSHHED------RAGHGH 2294



 Score = 28.5 bits (62), Expect = 9.1
 Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 5/118 (4%)
 Frame = -2

Query: 465  GERQSGRHRMVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHAR 286
            G + S   + V+  G   +         R + SR +      + Q + +     GSRH+ 
Sbjct: 3444 GRQGSHYEQSVDRSGHSGSHHSHTTSQGRSDASRGQSGSRSASRQTRNDEQSGDGSRHSW 3503

Query: 285  GREEEALLNVVAREHGHVGDGQ----LEVSNRLSALRQNQMLGDHG-DGRRWRARANQ 127
                EA     +  H   G GQ        N+ S++ Q+     H  D  RW   A++
Sbjct: 3504 SHHHEASTQADSSRHSQSGQGQSAGPRTSRNQGSSVSQDSDSQGHSEDSERWSGSASR 3561

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>MYS_PODCA (Q05000) Myosin heavy chain (Fragment)|
          Length = 692

 Score = 36.2 bits (82), Expect = 0.043
 Identities = 28/96 (29%), Positives = 43/96 (44%)
 Frame = -2

Query: 462 ERQSGRHRMVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHARG 283
           E++ G+   V+L+   +    D  + E+DE     RK+     QRQ E L       +R 
Sbjct: 291 EQEEGKLLKVQLEYTQLRQSSDRKLSEKDEELEGLRKNH----QRQMESLQNTIDSESRS 346

Query: 282 REEEALLNVVAREHGHVGDGQLEVSNRLSALRQNQM 175
           + E+  L           + QLE SNR++A  Q QM
Sbjct: 347 KAEQQKLRKKYDADMMELESQLESSNRVAAESQKQM 382

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>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 35.4 bits (80), Expect = 0.074
 Identities = 23/63 (36%), Positives = 31/63 (49%)
 Frame = -2

Query: 459 RQSGRHRMVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHARGR 280
           R  GR+  +E D R      D V   RDE +RER +  ER  +R++ER  E      + R
Sbjct: 646 RHQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERERERDREREKER 705

Query: 279 EEE 271
           E E
Sbjct: 706 ELE 708

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>NUMA1_HUMAN (Q14980) Nuclear mitotic apparatus protein 1 (NuMA protein) (SP-H|
            antigen)
          Length = 2115

 Score = 33.9 bits (76), Expect = 0.22
 Identities = 31/88 (35%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
 Frame = -2

Query: 387  GERDEP-SRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEV 211
            GE+ E  SRE  K P RAG RQ E L+E   R  +    +A L  + RE   +G+ +LE 
Sbjct: 927  GEQQETASRELVKEPARAGDRQPEWLEEQQGR--QFCSTQAALQAMEREAEQMGN-ELER 983

Query: 210  SNRLSALRQNQMLGDHGDGRRWRARANQ 127
                    Q Q   + G   R  AR  Q
Sbjct: 984  LRAALMESQGQQQEERGQQEREVARLTQ 1011

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>CYP1_BRUMA (Q27450) Peptidyl-prolyl cis-trans isomerase 1 (EC 5.2.1.8) (PPIase|
           1) (Cyclophilin) (BmCYP-1)
          Length = 843

 Score = 33.5 bits (75), Expect = 0.28
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
 Frame = -2

Query: 462 ERQSGRHRMVELDGRVVAPDDDAVVGERDEPSRERRK-----HPERAGQRQQERLDEAGS 298
           +RQ   H+  EL+ R +   D   + ERD  S++RRK     H  +  ++ + +  E   
Sbjct: 536 DRQHREHKNDELEKRAIEKQDKDQIVERDTGSKQRRKSDSKEHRGKTDRKHRSKSIEEDG 595

Query: 297 RHARGREE 274
           R +  RE+
Sbjct: 596 RRSTSREK 603

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>CAC1B_RAT (Q02294) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2336

 Score = 32.7 bits (73), Expect = 0.48
 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = -2

Query: 387  GERDEPSRERRKHPERA-GQRQQERLDEAGSRHARGREEEALLNVVAREHGH 235
            G R+E +R RR H + A G   Q R + +   H RG  EEA      R   H
Sbjct: 885  GAREERARPRRSHSKEAPGADTQVRCERSRRHHRRGSPEEATEREPRRHRAH 936

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>BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING|
           finger protein 20)
          Length = 973

 Score = 32.3 bits (72), Expect = 0.63
 Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
 Frame = -2

Query: 411 APDDDAVVGERDEPSRER-RKHPERAGQRQQERLDEAGSRHARGREEEALLNVVA-REHG 238
           A  +D V  +RDE  RER R+  ER  +R++E+  E      + +E E   + V  +E G
Sbjct: 552 ASQEDEVKSKRDEEERERERREKEREREREREKEKEREREKQKLKESEKERDSVKDKEKG 611

Query: 237 HVGDGQLEVSNRLSALR 187
              DG+ + +  +  L+
Sbjct: 612 KHDDGRKKEAEIIKQLK 628

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>CAC1B_MOUSE (O55017) Voltage-dependent N-type calcium channel alpha-1B subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.2)
            (Calcium channel, L type, alpha-1 polypeptide isoform 5)
            (Brain calcium channel III) (BIII)
          Length = 2327

 Score = 32.0 bits (71), Expect = 0.82
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
 Frame = -2

Query: 387  GERDEPSRERRKH-PERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGH 235
            G R+E +R RR H  E  G   Q R + +   H RG  EEA      R   H
Sbjct: 879  GAREERARPRRSHSKETPGADTQVRCERSRRHHRRGSPEEATEREPRRHRAH 930

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>SPEG_HUMAN (Q15772) Striated muscle preferentially expressed protein kinase (EC|
            2.7.11.1) (Aortic preferentially expressed protein 1)
            (APEG-1)
          Length = 3223

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 13/100 (13%)
 Frame = -2

Query: 411  APDDDAVVGERDEPSR--ERRKHPERAGQRQQERLDEAGSRH-ARGREEEALLNVVARE- 244
            AP  +A+     EP+     R+   R G   +  L  AG R   RG  + A + +  R  
Sbjct: 1986 APSPEALPSPGQEPAAGASPRRGELRRGSSAESALPRAGPRELGRGLHKAASVELPQRRS 2045

Query: 243  ---------HGHVGDGQLEVSNRLSALRQNQMLGDHGDGR 151
                      G +G+G  E + RL ALRQ  + G   DG+
Sbjct: 2046 PGPGATRLARGGLGEG--EYAQRLQALRQRLLRGGPEDGK 2083

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>FILA_MOUSE (P11088) Filaggrin (Fragment)|
          Length = 336

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 23/86 (26%), Positives = 33/86 (38%)
 Frame = -2

Query: 426 DGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAR 247
           +G+ V     +  G+R E    R +H       Q+   +E+ S+H  G + E       R
Sbjct: 122 EGQAVGAHRQSGAGQRHEQRSSRGQHGSGYYYEQEHSEEESDSQHQHGHQHEQ-----QR 176

Query: 246 EHGHVGDGQLEVSNRLSALRQNQMLG 169
            H H    Q E     S  RQ Q  G
Sbjct: 177 GHQHQHQHQHEHEQPESGHRQQQSSG 202

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>DP13A_MOUSE (Q8K3H0) DCC-interacting protein 13 alpha (Dip13 alpha) (Adapter|
           protein containing PH domain, PTB domain and leucine
           zipper motif 1)
          Length = 707

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 23/86 (26%), Positives = 40/86 (46%)
 Frame = -2

Query: 396 AVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQL 217
           A+  E D  + E++K  ER  ++QQ+ L +         E+  L+   +R +    +GQL
Sbjct: 625 ALHAELDRRASEKQKEIERVKEKQQKELSKQKQIEKDLEEQSRLIAASSRPNQAGSEGQL 684

Query: 216 EVSNRLSALRQNQMLGDHGDGRRWRA 139
            +S   S+  +   LG+ G  R   A
Sbjct: 685 VLS---SSQSEESDLGEEGKKRESEA 707

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>TRHY_RABIT (P37709) Trichohyalin|
          Length = 1407

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 3/116 (2%)
 Frame = -2

Query: 462  ERQSGRHRMVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHARG 283
            E +  R R  E + R +  ++  +  E  E  RER +      Q  QER +E   R  R 
Sbjct: 921  ESEEERLRRQERE-RKLREEEQLLRREEQELRRERARKLREEEQLLQEREEERLRRQERA 979

Query: 282  ---REEEALLNVVAREHGHVGDGQLEVSNRLSALRQNQMLGDHGDGRRWRARANQL 124
               REEE LL    +E     D +     +L   R+ + L      R++R    QL
Sbjct: 980  RKLREEEQLLRREEQELRQERDRKFREEEQLLQEREEERLRRQERDRKFREEERQL 1035



 Score = 28.9 bits (63), Expect = 6.9
 Identities = 19/69 (27%), Positives = 31/69 (44%)
 Frame = -2

Query: 384 ERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEVSN 205
           +R+E  + RR+  ER  +  +E   E   R  + REEE LL     E     + + ++  
Sbjct: 573 QREEDEKRRRQERERQYRELEELRQEEQLRDRKLREEEQLLQEREEERLRRQERERKLRE 632

Query: 204 RLSALRQNQ 178
               LRQ +
Sbjct: 633 EEQLLRQEE 641



 Score = 28.9 bits (63), Expect = 6.9
 Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
 Frame = -2

Query: 384 ERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEV-- 211
           E ++  RERR+  ERA Q ++E+L     R  R REE      + RE   + + +  +  
Sbjct: 220 EEEQQRRERREQHERALQEEEEQL----LRQRRWREEPREQQQLRRELEEIREREQRLEQ 275

Query: 210 -SNRLSALRQNQML 172
              R   LR+ Q L
Sbjct: 276 EERREQQLRREQRL 289

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>LTBP3_MOUSE (Q61810) Latent transforming growth factor beta-binding protein 3|
            precursor (LTBP-3)
          Length = 1268

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 8/45 (17%)
 Frame = -1

Query: 205  PAERPPAEPDAWRPRRWSALARSRKPVGLAR--------PWTGPA 95
            PAE  PA+     P RWS   R  K  G +         PW GPA
Sbjct: 1060 PAEYSPAQAQCLIPERWSTPQRDVKCAGASEERTACVWGPWAGPA 1104

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>RPC1_YEAST (P04051) DNA-directed RNA polymerase III largest subunit (EC|
           2.7.7.6) (C160)
          Length = 1460

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 32/134 (23%), Positives = 58/134 (43%), Gaps = 27/134 (20%)
 Frame = -2

Query: 441 RMVELDGR-VVAPDDDAVVGERDEPSRERR--KHPERAGQRQQERLDEA---------GS 298
           + V+  GR V++PD +  + E   P R  +   +PE+  +  + +L E          G+
Sbjct: 371 KRVDFSGRTVISPDPNLSIDEVAVPDRVAKVLTYPEKVTRYNRHKLQELIVNGPNVHPGA 430

Query: 297 RHARGREEEALLNV-------VARE-------HGHVGDGQLEVSNRLSALRQNQMLGDHG 160
            +   R E+A  N+       +A+          H+ DG + + NR  +L +  +L  + 
Sbjct: 431 NYLLKRNEDARRNLRYGDRMKLAKNLQIGDVVERHLEDGDVVLFNRQPSLHRLSILSHYA 490

Query: 159 DGRRWRA-RANQLV 121
             R WR  R N+ V
Sbjct: 491 KIRPWRTFRLNECV 504

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>RS3_CORJK (Q4JT53) 30S ribosomal protein S3|
          Length = 247

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = -2

Query: 423 GRVVAPDDDAVVGERDE-PSRERRKHPERAGQRQQ 322
           G VV    ++++  RDE PSR RR+ P R G R+Q
Sbjct: 205 GDVVGGRRESLMNARDERPSRGRRERPRRGGARRQ 239

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>SVIL_MOUSE (Q8K4L3) Supervillin (Archvillin) (p205/p250)|
          Length = 2170

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 6/111 (5%)
 Frame = -2

Query: 447 RHRMVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQ--RQQERLDEAGSRHARGREE 274
           R ++ E  G  + P+ D+    R   SR+     ER G+  +Q+E+  +A SRH+R    
Sbjct: 108 RRQLAEKYGLTLDPEADSEYLSRYAKSRKDPDVTERRGKSDKQEEQSKDANSRHSRTESG 167

Query: 273 EALLNVVAREHGHVGDGQLEVSNRLSALRQNQM----LGDHGDGRRWRARA 133
                V +++   +G    +    L+   Q ++    LG+ G    +  R+
Sbjct: 168 PRTSLVASQDCTPLGSNMSDQEQLLNVENQRRVQDPPLGEDGSSAFFSERS 218

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>PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
           3.6.1.-)
          Length = 1211

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 19/65 (29%), Positives = 32/65 (49%)
 Frame = -2

Query: 462 ERQSGRHRMVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHARG 283
           +R S R R   +D R    D+D+    R + SR+RR+  +R   R   R  ++  R  R 
Sbjct: 55  DRDSYRRRDRSVDRRDDHRDEDSYRSSRRDRSRDRRRSRDRGDDRDHRR--KSRERDYRS 112

Query: 282 REEEA 268
           R +++
Sbjct: 113 RRDDS 117

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>IF2_BURS3 (Q39H30) Translation initiation factor IF-2|
          Length = 972

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 13/72 (18%)
 Frame = -2

Query: 420 RVVAPDDDAVVGERDEPSR-----------ERRKHPERAGQRQQER--LDEAGSRHARGR 280
           +V   DDDA +  R+E +R           E R+  ER  + + ER   +EA     R  
Sbjct: 112 QVAEADDDAELKRREEEARREADLLEKQAQELRERQERLEREEAERRAREEAAEAERRRA 171

Query: 279 EEEALLNVVARE 244
           EEEA    VA E
Sbjct: 172 EEEAAAKRVAAE 183

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>TCF20_HUMAN (Q9UGU0) Transcription factor 20 (Stromelysin 1 PDGF-responsive|
           element-binding protein) (SPRE-binding protein) (Nuclear
           factor SPBP) (AR1)
          Length = 1960

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 15/51 (29%), Positives = 28/51 (54%)
 Frame = +1

Query: 97  PAPSMAVLNQLVCASAPTPTIAVVSKHLVLPEGAQPVGDLKLSVSDMPMLS 249
           P+P+ +V+    C+S P+P +    ++L   +G+ P+G     +  MP LS
Sbjct: 370 PSPAASVVQSPSCSSTPSP-LMQTGENLQCGQGSVPMGSRNRILQLMPQLS 419

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>TWST1_CALJA (Q8MIH1) Twist-related protein 1|
          Length = 203

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 12/46 (26%), Positives = 26/46 (56%)
 Frame = -2

Query: 438 MVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAG 301
           M ++    V+P DD++    +EP R++ +  +R G++++     AG
Sbjct: 2   MQDVSSSPVSPADDSLSNSEEEPDRQQPQSGKRGGRKRRSSRRSAG 47

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>RFC1_YEAST (P38630) Activator 1 95 kDa subunit (Replication factor C subunit|
           1) (Replication factor C1) (Cell division control
           protein 44)
          Length = 861

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
 Frame = -3

Query: 395 RSSGSVTSRPASAGNT-PSARDSDSKSDLTRR-------AVGMPAGVKKRPF*M*WHESM 240
           R + S T +PAS+  T PS++ SDS S++T +       ++ +     K      +  + 
Sbjct: 76  RKASSPTVKPASSKKTKPSSKSSDSASNITAQDVLDKIPSLDLSNVHVKENAKFDFKSAN 135

Query: 239 GMSETDSLRSPTG*APSGRTRCLETTAMVGVGAL 138
             ++ D + S  G  P G+  CL    +V  G L
Sbjct: 136 SNADPDEIVSEIGSFPEGKPNCLLGLTIVFTGVL 169

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>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
           3.6.1.-)
          Length = 1186

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 20/65 (30%), Positives = 30/65 (46%)
 Frame = -2

Query: 462 ERQSGRHRMVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHARG 283
           +R S R R   LD R    D+D     R + SR+RR+  +R   R   R   +  R  R 
Sbjct: 57  DRDSYRRRDRSLDRRADYRDEDTYRPSRRDRSRDRRRSRDRDDDRDYRR--RSRDRDFRS 114

Query: 282 REEEA 268
           R +++
Sbjct: 115 RRDDS 119

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>AN32E_MOUSE (P97822) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member E (LANP-like protein) (LANP-L) (Cerebellar
           postnatal development protein 1)
          Length = 260

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 25/92 (27%), Positives = 37/92 (40%), Gaps = 9/92 (9%)
 Frame = -2

Query: 405 DDDAVVGERDEPSRERRKH--PERAGQRQQERLDEAGSRHARGREEEALLNVVARE---- 244
           DDD   G+ DE   +  +   PE   + + +  DEAGS    G EE  L  ++  E    
Sbjct: 162 DDDDEDGDEDEEDEDEDEAGPPEGYEEEEDDDEDEAGSEVGEGEEEVGLSYLMKDEIQDE 221

Query: 243 ---HGHVGDGQLEVSNRLSALRQNQMLGDHGD 157
                +V +G+ E       LR  +   D  D
Sbjct: 222 EDDDDYVDEGEEEEEEEEEGLRGEKRKRDAED 253

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>HORN_HUMAN (Q86YZ3) Hornerin|
          Length = 2850

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 30/128 (23%), Positives = 36/128 (28%)
 Frame = -2

Query: 387  GERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEVS 208
            G     S    +H   +GQ       E+ S HA GR      +  +  HG  G G     
Sbjct: 845  GSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGRHGSGSGQSPGHGQRGSGS---- 900

Query: 207  NRLSALRQNQMLGDHGDGRRWRARANQLVXXXXXXXXRSLHHDVGGDQRSHLNWSGSCSL 28
                   Q+   G HG G                    S  H  G  Q S      S   
Sbjct: 901  ------GQSPSYGRHGSG--------------SGRSSSSGRHGSGSGQSSGFGHKSSSGQ 940

Query: 27   GDGVTQDG 4
              G TQ G
Sbjct: 941  SSGYTQHG 948

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>GLMM_SILPO (Q5LTP9) Phosphoglucosamine mutase (EC 5.4.2.10)|
          Length = 448

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 29/100 (29%), Positives = 44/100 (44%)
 Frame = -2

Query: 315 LDEAGSRHARGREEEALLNVVAREHGHVGDGQLEVSNRLSALRQNQMLGDHGDGRRWRAR 136
           +D+ G+  A G +  ALL       G +  G L V+  +S L   + LGD G G    A 
Sbjct: 250 IDQLGNV-ADGDQIMALLAARWAAEGRLQGGAL-VATVMSNLGLERFLGDRGIGLERTAV 307

Query: 135 ANQLVXXXXXXXXRSLHHDVGGDQRSHLNWSGSCSLGDGV 16
            ++ V         +L    GG+Q  H+  S   + GDG+
Sbjct: 308 GDRYVVERMREGGFNL----GGEQSGHIVMSDFATTGDGL 343

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>BRE1A_CHICK (Q5ZLS3) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING|
           finger protein 20)
          Length = 984

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = -2

Query: 375 EPSRERRKHPERAGQRQQERLDEAGSRHARGREEEA 268
           E  RER K  ++  ++++E  ++   +H  GR++EA
Sbjct: 597 EKEREREKQKQKESEKERESKEKEKGKHEDGRKKEA 632



 Score = 28.9 bits (63), Expect = 6.9
 Identities = 23/94 (24%), Positives = 38/94 (40%)
 Frame = -2

Query: 420 RVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREH 241
           R  + +   V   RDE  RER +      +R++ER  E      R +E+E       +E 
Sbjct: 551 RAASEEASEVKARRDEEERERERR-----EREREREKEKEKEREREKEKE-------KEK 598

Query: 240 GHVGDGQLEVSNRLSALRQNQMLGDHGDGRRWRA 139
               + Q +  +      + +  G H DGR+  A
Sbjct: 599 EREREKQKQKESEKERESKEKEKGKHEDGRKKEA 632

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>DP13A_HUMAN (Q9UKG1) DCC-interacting protein 13 alpha (Dip13 alpha) (Adapter|
           protein containing PH domain, PTB domain and leucine
           zipper motif 1)
          Length = 709

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 22/86 (25%), Positives = 40/86 (46%)
 Frame = -2

Query: 396 AVVGERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQL 217
           A+  E D  + E++K  ER  ++QQ+ L++         E+  L+   +R +    +GQ 
Sbjct: 626 ALHAELDRRASEKQKEIERVKEKQQKELNKQKQIEKDLEEQSRLIAASSRPNQASSEGQF 685

Query: 216 EVSNRLSALRQNQMLGDHGDGRRWRA 139
            V +  S+  +   LG+ G  R   A
Sbjct: 686 VVLS--SSQSEESDLGEGGKKRESEA 709

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>SFR17_HUMAN (Q8TF01) Splicing factor, arginine/serine-rich 130|
           (Serine-arginine-rich splicing regulatory protein 130)
           (SRrp130) (SR-rich protein) (SR-related protein)
          Length = 805

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 16/51 (31%), Positives = 26/51 (50%)
 Frame = -2

Query: 372 PSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQ 220
           PSRERR+   R+  R+  R   + SR  R + ++   N+    H H G+ +
Sbjct: 612 PSRERRRSRSRSRDRRTNRASRSRSRDRR-KIDDQRGNLSGNSHKHKGEAK 661

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>V120_EHV1V (P84405) Capsid assembly protein 23|
          Length = 1020

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 29/123 (23%), Positives = 44/123 (35%)
 Frame = +1

Query: 16  DAIAERAGATPVKMAPLITADVVVEAAPAPSMAVLNQLVCASAPTPTIAVVSKHLVLPEG 195
           D    +  A    ++P +  D     AP P+MA  N L        ++ V +  L+ PE 
Sbjct: 640 DGYRTKLTAIIASVSPFLQKD-----APTPTMAHANNLEALLGELHSVVVAAIALI-PER 693

Query: 196 AQPVGDLKLSVSDMPMLSCHYIQKGLFFTPAGMPTARLVKXXXXXXXRALGVFPALAGRL 375
           A      ++ V + P +       GLF T        LV          LG    +   +
Sbjct: 694 A------RMPVPERPSVKTSTFLAGLFLTAVYKRLETLVGHTAELTNNILGTASGIVSSI 747

Query: 376 VTL 384
           VTL
Sbjct: 748 VTL 750

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>V120_EHV1B (P28956) Capsid assembly protein 23|
          Length = 1020

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 29/123 (23%), Positives = 44/123 (35%)
 Frame = +1

Query: 16  DAIAERAGATPVKMAPLITADVVVEAAPAPSMAVLNQLVCASAPTPTIAVVSKHLVLPEG 195
           D    +  A    ++P +  D     AP P+MA  N L        ++ V +  L+ PE 
Sbjct: 640 DGYRTKLTAIIASVSPFLQKD-----APTPTMAHANNLEALLGELHSVVVAAIALI-PER 693

Query: 196 AQPVGDLKLSVSDMPMLSCHYIQKGLFFTPAGMPTARLVKXXXXXXXRALGVFPALAGRL 375
           A      ++ V + P +       GLF T        LV          LG    +   +
Sbjct: 694 A------RMPVPERPSVKTSTFLAGLFLTAVYKRLETLVGHTAELTNNILGTASGIVSSI 747

Query: 376 VTL 384
           VTL
Sbjct: 748 VTL 750

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>TNNI_CHLNI (Q7M3Y3) Troponin I (TnI)|
          Length = 292

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 16/39 (41%), Positives = 23/39 (58%)
 Frame = -2

Query: 384 ERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEA 268
           +R E  R+RR+  +R  Q ++ERL     R  + REEEA
Sbjct: 90  QRQEEERQRREEEQRRQQEEEERLRL--EREEQEREEEA 126

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>TWST1_PANTR (Q8MI03) Twist-related protein 1|
          Length = 201

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = -2

Query: 438 MVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAG 301
           M ++    V+P DD++    +EP R++    +R G++++     AG
Sbjct: 2   MQDVSSSPVSPADDSLSNSEEEPDRQQPPSGKRGGRKRRSSRRSAG 47

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>TWST1_MACTO (Q7JGP2) Twist-related protein 1|
          Length = 201

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = -2

Query: 438 MVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAG 301
           M ++    V+P DD++    +EP R++    +R G++++     AG
Sbjct: 2   MQDVSSSPVSPADDSLSNSEEEPDRQQPPSGKRGGRKRRSSRRSAG 47

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>TWST1_GORGO (Q8MI06) Twist-related protein 1|
          Length = 203

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = -2

Query: 438 MVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAG 301
           M ++    V+P DD++    +EP R++    +R G++++     AG
Sbjct: 2   MQDVSSSPVSPADDSLSNSEEEPDRQQPPSGKRGGRKRRSSRRSAG 47

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>SPEG_RAT (Q63638) Striated muscle-specific serine/threonine protein kinase (EC|
            2.7.11.1) (Aortic preferentially expressed protein 1)
            (APEG-1)
          Length = 3259

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 30/109 (27%), Positives = 44/109 (40%), Gaps = 18/109 (16%)
 Frame = -2

Query: 423  GRVVAPDDDAVVGE------RDEPSRERRKHPE-RAGQRQQERLDEAGSRH-ARGREEEA 268
            GR  + D +A   E      ++ P     + PE R G   +  L   GSR   R   + A
Sbjct: 1982 GRAPSKDQEAPSPEALPSPGQESPDGPSPRRPELRRGSSAESALPRVGSREPGRSLHKAA 2041

Query: 267  LLNVVARE----------HGHVGDGQLEVSNRLSALRQNQMLGDHGDGR 151
             + +  R            G +G+G  E + RL ALRQ  + G   DG+
Sbjct: 2042 SVELPQRRSPSPGATRLTRGGLGEG--EYAQRLQALRQRLLRGGPEDGK 2088

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>TWST1_HUMAN (Q15672) Twist-related protein 1 (H-twist)|
          Length = 202

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = -2

Query: 438 MVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAG 301
           M ++    V+P DD++    +EP R++    +R G++++     AG
Sbjct: 2   MQDVSSSPVSPADDSLSNSEEEPDRQQPPSGKRGGRKRRSSRRSAG 47

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>TF65_HUMAN (Q04206) Transcription factor p65 (Nuclear factor NF-kappa-B p65|
           subunit)
          Length = 551

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +1

Query: 94  APAPSMAVLNQLVCASAPTPTIAVVSKHLVLPEGAQP 204
           APAP+ A+++ L  A AP P +A      V P   +P
Sbjct: 392 APAPAPAMVSALAQAPAPVPVLAPGPPQAVAPPAPKP 428

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>TWST1_EULFU (Q8MIF3) Twist-related protein 1|
          Length = 198

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = -2

Query: 438 MVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAG 301
           M ++    V+P DD++    +EP R++    +R G++++     AG
Sbjct: 2   MQDVSSSPVSPADDSLSNSEEEPDRQQPPSGKRGGRKRRSSRRSAG 47

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>TWST1_HYLCO (Q8MIE7) Twist-related protein 1|
          Length = 204

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 12/46 (26%), Positives = 25/46 (54%)
 Frame = -2

Query: 438 MVELDGRVVAPDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAG 301
           M ++    V+P DD++    +EP R++    +R G++++     AG
Sbjct: 2   MQDVSSSPVSPADDSLSNSEEEPDRQQPPSGKRGGRKRRSSRRSAG 47

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>PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)|
          Length = 939

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 28/97 (28%), Positives = 39/97 (40%), Gaps = 4/97 (4%)
 Frame = +1

Query: 25  AERAGATPVK--MAPLITADVVVEAA--PAPSMAVLNQLVCASAPTPTIAVVSKHLVLPE 192
           A  AGA P     AP  TA V  E +  PAP  ++  Q   A   +P    +   + +P 
Sbjct: 258 AAAAGAAPAAPGTAPGGTAPVPKEDSRLPAPKGSLAEQDAPAPGCSPLATTMMDFIHVP- 316

Query: 193 GAQPVGDLKLSVSDMPMLSCHYIQKGLFFTPAGMPTA 303
              P+G   L+     +L       G F  P G P+A
Sbjct: 317 -ILPLGSAFLAARTRQLLEAETYDAGAFAPPRGSPSA 352

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>TRH_ONCNE (Q8QFQ9) Thyroliberin type A precursor [Contains: Prothyroliberin|
           type A; Thyroliberin (Thyrotropin-releasing hormone)
           (TRH) (Thyrotropin-releasing factor) (TRF)
           (TSH-releasing factor) (Protirelin)]
          Length = 258

 Score = 28.9 bits (63), Expect = 6.9
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -2

Query: 387 GERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREE---EALLNVVAREH 241
           G+R +   E+R+HP +  + + E  DE   R   G+ E   ++ + +  R+H
Sbjct: 81  GKRYQEELEKRQHPGKREEDEDEDYDEVQKRQHPGKREDEFDSFVELQRRQH 132

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>CVCA_PEA (P13915) Convicilin precursor|
          Length = 571

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
 Frame = -2

Query: 462 ERQSGRHRMVELDGRVVAPDDDAVVGERDEPSRE-------RRKHPE-RAGQRQQERLDE 307
           E+Q  R++  + + + V P  +    E DE   E       RR+ PE RA  R +E   +
Sbjct: 71  EKQKYRYQREKKEQKEVQPGRERWEREEDEEQVEEEWRGSQRREDPEERARLRHREERTK 130

Query: 306 AGSRHARGREEE 271
              RH R  EEE
Sbjct: 131 RDRRHQREGEEE 142

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>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-2)
          Length = 1558

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -2

Query: 381  RDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHV 232
            R+E  RE+ K  ER  +R++ER  E  ++ +    E  L +      GH+
Sbjct: 1171 REEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPGHM 1220

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>RBM25_HUMAN (P49756) Probable RNA-binding protein 25 (RNA-binding motif protein|
           25) (RNA-binding region-containing protein 7) (Protein
           S164)
          Length = 784

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = -2

Query: 462 ERQSGRHRMVELDGRVVA---PDDDAVVGERDEPSRERRKHPERAGQRQQERLDEAGSRH 292
           +R+  +  + E+  R++A   PD DA + +R E   ERR+ P+   + + E  +E     
Sbjct: 476 DRKREKEELEEIRQRLLAEGHPDPDAEL-QRMEQEAERRRQPQIKQEPESEEEEEEKQEK 534

Query: 291 ARGREE 274
              REE
Sbjct: 535 EEKREE 540

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>NOLB_RHIFR (P33208) Nodulation protein nolB|
          Length = 164

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 3/76 (3%)
 Frame = +1

Query: 16  DAIAERAGATPVKMAPLITADVVVEAAP-APSMAVLNQLVCASAPTPTIAVVSKH--LVL 186
           D++     +TPV+ AP+     V  AAP +P    + Q + A  P   +A  + +    L
Sbjct: 35  DSMKNDTASTPVRTAPISPPMDVHRAAPTSPLKDRVLQTISAICPDSIVAAAAPNHKAAL 94

Query: 187 PEGAQPVGDLKLSVSD 234
             GA P    KL V D
Sbjct: 95  ISGAPPGPSQKLPVED 110

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>GCP60_HUMAN (Q9H3P7) Golgi resident protein GCP60 (Acyl-CoA-binding|
           domain-containing protein 3) (Golgi phosphoprotein 1)
           (GOLPH1) (Golgi complex-associated protein 1) (GOCAP1)
           (PBR- and PKA-associated protein 7) (Peripherial
           benzodiazepine receptor-asso
          Length = 527

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/61 (24%), Positives = 29/61 (47%)
 Frame = -2

Query: 384 ERDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHVGDGQLEVSN 205
           E++E  ++R++  ER  + ++ER         R REEE  L     E   + + +L +  
Sbjct: 181 EKEEQEKKRKEEEERRRREEEERERLQKEEEKRRREEEERLRREEEERRRIEEERLRLEQ 240

Query: 204 R 202
           +
Sbjct: 241 Q 241

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>TRHY_HUMAN (Q07283) Trichohyalin|
          Length = 1898

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
 Frame = -2

Query: 465 GERQSGRHRMVELDGRVVAPDDDAVVGERDEPSRERRKHPERA---GQRQQERLDEAGSR 295
           G+    + R  E D R   P D  +  E  +  R++R+  ER    G+ Q E+ +    R
Sbjct: 105 GKESLLQDRRTEEDQRRFEPRDRQLEEEPGQRRRQKRQEQERELAEGEEQSEKQERLEQR 164

Query: 294 HARGREEE 271
             + R+EE
Sbjct: 165 DRQRRDEE 172

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>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-related protein)
          Length = 1559

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 381  RDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLN 259
            R+E  RE+ K  ER  +R++ER  E  ++ A     E  L+
Sbjct: 1171 REEREREKEKEKEREREREREREAERAAQKASSSAHEGRLS 1211

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>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein|
            (Atrophin-1-like protein) (Atrophin-1-related protein)
          Length = 1566

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 15/50 (30%), Positives = 25/50 (50%)
 Frame = -2

Query: 381  RDEPSRERRKHPERAGQRQQERLDEAGSRHARGREEEALLNVVAREHGHV 232
            R+E  RE+ K  ER  +R++ER  E  ++ +    E  L +      GH+
Sbjct: 1179 REEREREKEKEKEREREREREREAERAAKASSSAHEGRLSDPQLSGPGHM 1228

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>GLB1_MAIZE (P15590) Globulin-1 S allele precursor (GLB1-S) (7S-like)|
          Length = 573

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 5/43 (11%)
 Frame = -2

Query: 384 ERDEPSRERRK----HPERAGQRQQERLDEAGS-RHARGREEE 271
           E++E  RE R       ER G+ ++E+ +E    RH RGR EE
Sbjct: 518 EQEEEEREERHGGRGERERHGREEREKEEEEREGRHGRGRREE 560

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>SPEG_MOUSE (Q62407) Striated muscle-specific serine/threonine protein kinase (EC|
            2.7.11.1) (Aortic preferentially expressed protein 1)
            (APEG-1)
          Length = 3262

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 29/100 (29%), Positives = 41/100 (41%), Gaps = 13/100 (13%)
 Frame = -2

Query: 411  APDDDAVVGERDE-PSRERRKHPE-RAGQRQQERLDEAGSRH-ARGREEEALLNVVARE- 244
            AP  +A+     E P     + PE R G   +  L   GSR   R   + A + +  R  
Sbjct: 1991 APSPEALPSPGQESPDGPSPRRPELRRGSSAESALPRVGSREPGRSLHKAASVELPQRRS 2050

Query: 243  ---------HGHVGDGQLEVSNRLSALRQNQMLGDHGDGR 151
                      G +G+G  E + RL ALRQ  + G   DG+
Sbjct: 2051 PSPGATRLTRGGLGEG--EYAQRLQALRQRLLRGGPEDGK 2088


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,973,605
Number of Sequences: 219361
Number of extensions: 1087034
Number of successful extensions: 5263
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 4829
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5209
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

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