>OXAA_BRAJA (Q89BQ0) Inner membrane protein oxaA|
          Length = 616

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
 Frame = +3

Query: 282 LCLYYFQEFFGRMGSKVLLVT----LLLMGIASQSYAT 383
           L L +F  FFG  G  +LLVT    LL   +A++SYA+
Sbjct: 380 LGLDFFYRFFGNFGISILLVTVIVKLLFFPLANKSYAS 417

>RNH2_SYNAS (Q2LVU5) Ribonuclease HII (EC 3.1.26.4) (RNase HII)|
          Length = 212

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 20/75 (26%), Positives = 32/75 (42%)
 Frame = -1

Query: 395 VKAPGGIALRGYAHQEKGDQKHLGAHPSEELLKIVETKSIXXXXXVLESVCISLAATTGI 216
           V A   I   GY+H E  D K L A   E+L ++++  ++     V+ES  I        
Sbjct: 34  VVAAAVILPHGYSHPEITDSKKLSAGKREKLYEVIKRDALAIGVGVVESPVIDQVNILRA 93

Query: 215 AFAFFSSGY*DVSVR 171
                +    D+S+R
Sbjct: 94  TLRAMAEAVDDLSIR 108


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,833,216
Number of Sequences: 219361
Number of extensions: 1006645
Number of successful extensions: 2413
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2413
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2909956200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)