ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet69g06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IND_ARATH (O81313) INDEHISCENT protein 32 0.91
2ERYA3_SACER (Q03133) Erythronolide synthase, modules 5 and 6 (EC... 28 7.7

>IND_ARATH (O81313) INDEHISCENT protein|
          Length = 169

 Score = 31.6 bits (70), Expect = 0.91
 Identities = 15/47 (31%), Positives = 27/47 (57%)
 Frame = +2

Query: 188 VGRKVRELRRLVPGASVMPTDRLLLRTADYIAQLRARVELLRALSEL 328
           +  K+R L+R+VPG + M T  +L     Y   L+ +V +L+  S++
Sbjct: 105 ISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVRILQPHSQI 151



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>ERYA3_SACER (Q03133) Erythronolide synthase, modules 5 and 6 (EC 2.3.1.94) (ORF|
           3) (6-deoxyerythronolide B synthase III) (DEBS 3)
          Length = 3171

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 9/74 (12%)
 Frame = -2

Query: 418 PLYVRDIHVYIRHTTGSQLARGVAMAMAFAELRERPEELH---PGPELR------DVVGR 266
           PL++  +   I HT  +    GV  A+      E P  LH   P P++        VV +
Sbjct: 361 PLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQ 420

Query: 265 TKEQPVGGHNGRSG 224
            +  P G    R+G
Sbjct: 421 ARSWPAGERPRRAG 434


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,221,691
Number of Sequences: 219361
Number of extensions: 664620
Number of successful extensions: 1882
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1860
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1882
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2618960580
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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