ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet69d12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1SPOT_SYNY3 (P74007) Probable guanosine-3',5'-bis(diphosphate) 3'... 93 1e-19
2SPOT_BORBU (O51216) Guanosine-3',5'-bis(diphosphate) 3'-pyrophos... 79 4e-15
3RELA_MYXXA (O52177) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 78 5e-15
4SPOT_AQUAE (O67012) Guanosine-3',5'-bis(diphosphate) 3'-pyrophos... 77 1e-14
5RELA_STAES (Q8CS97) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 76 2e-14
6RELA_STAEQ (Q5HNR8) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 76 2e-14
7RELA_VIBSS (P55133) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 75 5e-14
8RELA_SHIFL (P0AG23) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 75 5e-14
9RELA_ECOLI (P0AG20) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 75 5e-14
10RELA_ECOL6 (P0AG21) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 75 5e-14
11RELA_ECO57 (P0AG22) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 75 5e-14
12RELA_STAAW (P0A0E9) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 74 9e-14
13RELA_STAAU (P0A0F0) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 74 9e-14
14RELA_STAAS (Q6G8T5) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 74 9e-14
15RELA_STAAR (Q6GG70) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 74 9e-14
16RELA_STAAN (Q99TL8) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 74 9e-14
17RELA_STAAM (Q931Q4) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 74 9e-14
18RELA_HAEIN (P44644) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 73 2e-13
19RELA_BACSU (O54408) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 73 2e-13
20RELA_STRCO (P52560) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 72 3e-13
21RELA_CORGL (O87331) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 71 6e-13
22RELA_STREQ (Q54089) Putative GTP pyrophosphokinase (EC 2.7.6.5) ... 71 6e-13
23RELA_MYCTU (P66014) Probable GTP pyrophosphokinase (EC 2.7.6.5) ... 71 8e-13
24RELA_MYCBO (P66015) Probable GTP pyrophosphokinase (EC 2.7.6.5) ... 71 8e-13
25RELA_MYCLE (Q49640) Probable GTP pyrophosphokinase (EC 2.7.6.5) ... 70 1e-12
26RELA_STRAT (O85709) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP ... 68 5e-12
27SPOT_SPICI (O34098) Guanosine-3',5'-bis(diphosphate) 3'-pyrophos... 68 6e-12
28SPOT_SHIFL (P0AG26) Guanosine-3',5'-bis(diphosphate) 3'-pyrophos... 66 2e-11
29SPOT_ECOLI (P0AG24) Guanosine-3',5'-bis(diphosphate) 3'-pyrophos... 66 2e-11
30SPOT_ECO57 (P0AG25) Guanosine-3',5'-bis(diphosphate) 3'-pyrophos... 66 2e-11
31SPOT_HAEIN (P43811) Guanosine-3',5'-bis(diphosphate) 3'-pyrophos... 62 5e-10
32SPOT_MYCPN (P75386) Probable guanosine-3',5'-bis(diphosphate) 3'... 55 3e-08
33SPOT_MYCGE (P47520) Probable guanosine-3',5'-bis(diphosphate) 3'... 48 5e-06
34MIAA_FRATT (Q5NH42) tRNA delta(2)-isopentenylpyrophosphate trans... 32 0.30
35SNU23_YEAST (Q12368) 23 kDa U4/U6.U5 small nuclear ribonucleopro... 32 0.30
36NEUR4_MOUSE (Q8BZL1) Sialidase-4 (EC 3.2.1.18) (Neuraminidase 4)... 32 0.39
37ATX1_PLAFA (Q04956) Probable cation-transporting ATPase 1 (EC 3.... 32 0.51
38GCP_STRCO (O86793) Probable O-sialoglycoprotein endopeptidase (E... 30 1.1
39YWAC_BACSU (P39583) Hypothetical protein ywaC 30 1.1
40TILS_HAEIN (P44689) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR... 30 1.5
41HUTU_THEVO (Q978N4) Probable urocanate hydratase (EC 4.2.1.49) (... 29 2.5
42URE1_BRAJA (Q89UG0) Urease alpha subunit (EC 3.5.1.5) (Urea amid... 29 2.5
43URE1_GEOKA (Q5KYM1) Urease alpha subunit (EC 3.5.1.5) (Urea amid... 29 2.5
44ZN451_MOUSE (Q8C0P7) Zinc finger protein 451 29 2.5
45VP35_NPVBM (P31354) Early 35 kDa protein (p35) (Apoptosis preven... 29 2.5
46YPWA_BACSU (P50848) Hypothetical metalloprotease ypwA (EC 3.4.24.-) 29 3.3
47SGO1_YEAST (Q08490) Shugoshin 29 3.3
48OSTM1_HUMAN (Q86WC4) Osteopetrosis-associated transmembrane prot... 29 3.3
49OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid) 29 3.3
50YACL_BACSU (Q06754) Hypothetical protein yacL 28 4.3
51SYQ_DROME (Q9Y105) Probable glutaminyl-tRNA synthetase (EC 6.1.1... 28 4.3
52INVA_YERPS (P11922) Invasin 28 4.3
53ATM_SCHPO (O74630) Serine/threonine-protein kinase tel1 (EC 2.7.... 28 4.3
54URE1_RHOPA (Q6N3N3) Urease alpha subunit (EC 3.5.1.5) (Urea amid... 28 5.7
55ESTR_ACIAD (P52667) HTH-type transcriptional regulator estR (Est... 28 5.7
56TILS_ERWCT (Q6D8C5) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR... 28 5.7
57LMNA_XENLA (P11048) Lamin-A 28 5.7
58DUS6_RAT (Q64346) Dual specificity protein phosphatase 6 (EC 3.1... 28 7.4
59DUS6_MOUSE (Q9DBB1) Dual specificity protein phosphatase 6 (EC 3... 28 7.4
60DUS6_HUMAN (Q16828) Dual specificity protein phosphatase 6 (EC 3... 28 7.4
61CHIA_HUMAN (Q9BZP6) Acidic mammalian chitinase precursor (EC 3.2... 28 7.4
62ITIH3_MOUSE (Q61704) Inter-alpha-trypsin inhibitor heavy chain H... 27 9.7
63TILS_XYLFT (Q87BE2) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR... 27 9.7
64TILS_XYLFA (Q9PFJ8) tRNA(Ile)-lysidine synthase (EC 6.3.4.-) (tR... 27 9.7
65ITIH3_RAT (Q63416) Inter-alpha-trypsin inhibitor heavy chain H3 ... 27 9.7
66VWF_HUMAN (P04275) Von Willebrand factor precursor (vWF) [Contai... 27 9.7
67RECF_PARUW (Q6MAG9) DNA replication and repair protein recF 27 9.7
68FPS1_YEAST (P23900) Glycerol uptake/efflux facilitator protein 27 9.7
69ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast prec... 27 9.7
70LMNA_PIG (Q3ZD69) Lamin-A/C 27 9.7
71BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-) 27 9.7 
>SPOT_SYNY3 (P74007) Probable guanosine-3',5'-bis(diphosphate)|
           3'-pyrophosphohydrolase (EC 3.1.7.2) ((ppGpp)ase)
           (Penta-phosphate guanosine-3'-pyrophosphohydrolase)
          Length = 760

 Score = 93.2 bits (230), Expect = 1e-19
 Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   LCFKHLNPEEHKELSSKFVETFD--EALITSAVDTLDEGLREAGISYHNLSGRNKNLYSV 174
           L FK+L P+ ++++ S  VE     E+ + +  D L   LR+ GI +  L GR K+LY +
Sbjct: 216 LSFKYLEPDSYRKIQSLVVEKRGDRESRLETVKDMLRFRLRDEGIEHFELQGRPKHLYGI 275

Query: 175 YSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
           Y KM  ++   +E++DI  LR++V+ + +CYRAL VVH ++  + GRFK YI LP
Sbjct: 276 YYKMTSQDKAFEEIYDIAALRIIVESKGECYRALSVVHDVFKPIPGRFKDYIGLP 330
to top
>SPOT_BORBU (O51216) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase|
           (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate
           guanosine-3'-pyrophosphohydrolase)
          Length = 667

 Score = 78.6 bits (192), Expect = 4e-15
 Identities = 37/115 (32%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   LCFKHLNPEEHKELSSKFVETF--DEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSV 174
           L FKHL P+++KE+ +   ET    E  +     ++++ L+++GI    ++ R+K+ YS+
Sbjct: 202 LSFKHLYPKDYKEIKNFLSETKIEREKKLYKGKLSIEKELQKSGIEAE-ITVRSKHFYSI 260

Query: 175 YSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
           + KMQ +   + ++ D  G+R++  K+++CY  L++VH++W  + GR K YI+ P
Sbjct: 261 FRKMQTRTNKLTQIFDTLGIRIICKKQKECYEILEIVHRVWKPIPGRLKDYIASP 315
to top
>RELA_MYXXA (O52177) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 757

 Score = 78.2 bits (191), Expect = 5e-15
 Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   LCFKHLNPEEHKELSSKFVETFDEA--LITSAVDTLDEGLREAGISYHNLSGRNKNLYSV 174
           L F+++ P+E   L +K  +   E    I    D +   L E G+    +SGR K++YS+
Sbjct: 206 LSFRYVKPQEFFALQAKLNKRKKEREKYIEDTCDLIRSKLAERGLK-GEVSGRFKHVYSI 264

Query: 175 YSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
           Y K++ + +  D++HDI   R++      CY AL +VH++W  V GRFK +I++P
Sbjct: 265 YKKIKSQGIDFDQIHDIIAFRIIAPTAPSCYEALGLVHEMWKPVPGRFKDFIAIP 319
to top
>SPOT_AQUAE (O67012) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase|
           (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate
           guanosine-3'-pyrophosphohydrolase)
          Length = 696

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 39/114 (34%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
 Frame = +1

Query: 7   FKHLNPEEHKELSSKFVET---FDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVY 177
           FK+L PEE++++ +   E+    +E L    +  + + L + GI    +  R+K+ YS++
Sbjct: 188 FKYLYPEEYEKVRNFVKESRKNLEEYLRKYVIPKVRKELEKYGIEAE-IKYRSKHYYSIW 246

Query: 178 SKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
            K ++K + +++VHDI G+R++V+   +CY  L ++H L+  V G+FK YISLP
Sbjct: 247 EKTRRKGIRLEDVHDILGVRIIVNTVPECYTVLGIIHSLFRPVPGKFKDYISLP 300
to top
>RELA_STAES (Q8CS97) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 729

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 34/90 (37%), Positives = 58/90 (64%)
 Frame = +1

Query: 70  EALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIHGLRLVVD 249
           EA IT+A++ +   + +  +S   ++GR K++YS+Y KM K+    D++ D+  +R++V+
Sbjct: 215 EAYITNAINKIKNEMTKMNLS-GEINGRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVN 273

Query: 250 KEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
              DCY  L +VH LW  + GRFK YI++P
Sbjct: 274 SINDCYATLGLVHTLWKPMPGRFKDYIAMP 303
to top
>RELA_STAEQ (Q5HNR8) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 729

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 34/90 (37%), Positives = 58/90 (64%)
 Frame = +1

Query: 70  EALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIHGLRLVVD 249
           EA IT+A++ +   + +  +S   ++GR K++YS+Y KM K+    D++ D+  +R++V+
Sbjct: 215 EAYITNAINKIKNEMTKMNLS-GEINGRPKHIYSIYRKMIKQKKQFDQIFDLLAIRIIVN 273

Query: 250 KEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
              DCY  L +VH LW  + GRFK YI++P
Sbjct: 274 SINDCYATLGLVHTLWKPMPGRFKDYIAMP 303
to top
>RELA_VIBSS (P55133) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 744

 Score = 74.7 bits (182), Expect = 5e-14
 Identities = 38/113 (33%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
 Frame = +1

Query: 7   FKHLNPEEHKELSSKFVETF--DEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYS 180
           F++ +P+ +K+++ +  E     E  IT  VD L + ++ + I    + GR K++YS++ 
Sbjct: 202 FRYQHPDTYKQIAKQLSERRIDREDYITHFVDDLSDAMKASNIRAE-VQGRPKHIYSIWR 260

Query: 181 KMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
           KMQKK+L  DE+ D+  +R+V ++ +DCY AL VVH  +  +   F  Y++ P
Sbjct: 261 KMQKKSLEFDELFDVRAVRIVAEELQDCYAALGVVHTKYRHLPKEFDDYVANP 313
to top
>RELA_SHIFL (P0AG23) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 744

 Score = 74.7 bits (182), Expect = 5e-14
 Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
 Frame = +1

Query: 4   CFKHLNPEEHKELSSKFVETF--DEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVY 177
           CF++L+P E+K ++    E     E  I   V  L   ++  G+    + GR K++YS++
Sbjct: 202 CFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAE-VYGRPKHIYSIW 260

Query: 178 SKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
            KMQKKNL  DE+ D+  +R+V ++ +DCY AL +VH  +  +   F  Y++ P
Sbjct: 261 RKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANP 314
to top
>RELA_ECOLI (P0AG20) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 744

 Score = 74.7 bits (182), Expect = 5e-14
 Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
 Frame = +1

Query: 4   CFKHLNPEEHKELSSKFVETF--DEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVY 177
           CF++L+P E+K ++    E     E  I   V  L   ++  G+    + GR K++YS++
Sbjct: 202 CFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAE-VYGRPKHIYSIW 260

Query: 178 SKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
            KMQKKNL  DE+ D+  +R+V ++ +DCY AL +VH  +  +   F  Y++ P
Sbjct: 261 RKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANP 314
to top
>RELA_ECOL6 (P0AG21) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 744

 Score = 74.7 bits (182), Expect = 5e-14
 Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
 Frame = +1

Query: 4   CFKHLNPEEHKELSSKFVETF--DEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVY 177
           CF++L+P E+K ++    E     E  I   V  L   ++  G+    + GR K++YS++
Sbjct: 202 CFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAE-VYGRPKHIYSIW 260

Query: 178 SKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
            KMQKKNL  DE+ D+  +R+V ++ +DCY AL +VH  +  +   F  Y++ P
Sbjct: 261 RKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANP 314
to top
>RELA_ECO57 (P0AG22) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 744

 Score = 74.7 bits (182), Expect = 5e-14
 Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
 Frame = +1

Query: 4   CFKHLNPEEHKELSSKFVETF--DEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVY 177
           CF++L+P E+K ++    E     E  I   V  L   ++  G+    + GR K++YS++
Sbjct: 202 CFRYLHPTEYKRIAKLLHERRLDREHYIEEFVGHLRAEMKAEGVKAE-VYGRPKHIYSIW 260

Query: 178 SKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
            KMQKKNL  DE+ D+  +R+V ++ +DCY AL +VH  +  +   F  Y++ P
Sbjct: 261 RKMQKKNLAFDELFDVRAVRIVAERLQDCYAALGIVHTHYRHLPDEFDDYVANP 314
to top
>RELA_STAAW (P0A0E9) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 736

 Score = 73.9 bits (180), Expect = 9e-14
 Identities = 34/90 (37%), Positives = 56/90 (62%)
 Frame = +1

Query: 70  EALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIHGLRLVVD 249
           EA I +A+D +   +    I   +++GR K++YS+Y KM K+    D++ D+  +R++V+
Sbjct: 222 EAYIETAIDRIRTEMDRMNIE-GDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVN 280

Query: 250 KEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
              DCY  L +VH LW  + GRFK YI++P
Sbjct: 281 SINDCYAILGLVHTLWKPMPGRFKDYIAMP 310
to top
>RELA_STAAU (P0A0F0) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 736

 Score = 73.9 bits (180), Expect = 9e-14
 Identities = 34/90 (37%), Positives = 56/90 (62%)
 Frame = +1

Query: 70  EALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIHGLRLVVD 249
           EA I +A+D +   +    I   +++GR K++YS+Y KM K+    D++ D+  +R++V+
Sbjct: 222 EAYIETAIDRIRTEMDRMNIE-GDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVN 280

Query: 250 KEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
              DCY  L +VH LW  + GRFK YI++P
Sbjct: 281 SINDCYAILGLVHTLWKPMPGRFKDYIAMP 310
to top
>RELA_STAAS (Q6G8T5) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 736

 Score = 73.9 bits (180), Expect = 9e-14
 Identities = 34/90 (37%), Positives = 56/90 (62%)
 Frame = +1

Query: 70  EALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIHGLRLVVD 249
           EA I +A+D +   +    I   +++GR K++YS+Y KM K+    D++ D+  +R++V+
Sbjct: 222 EAYIETAIDRIRTEMDRMNIE-GDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVN 280

Query: 250 KEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
              DCY  L +VH LW  + GRFK YI++P
Sbjct: 281 SINDCYAILGLVHTLWKPMPGRFKDYIAMP 310
to top
>RELA_STAAR (Q6GG70) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 736

 Score = 73.9 bits (180), Expect = 9e-14
 Identities = 34/90 (37%), Positives = 56/90 (62%)
 Frame = +1

Query: 70  EALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIHGLRLVVD 249
           EA I +A+D +   +    I   +++GR K++YS+Y KM K+    D++ D+  +R++V+
Sbjct: 222 EAYIETAIDRIRTEMDRMNIE-GDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVN 280

Query: 250 KEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
              DCY  L +VH LW  + GRFK YI++P
Sbjct: 281 SINDCYAILGLVHTLWKPMPGRFKDYIAMP 310
to top
>RELA_STAAN (Q99TL8) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 736

 Score = 73.9 bits (180), Expect = 9e-14
 Identities = 34/90 (37%), Positives = 56/90 (62%)
 Frame = +1

Query: 70  EALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIHGLRLVVD 249
           EA I +A+D +   +    I   +++GR K++YS+Y KM K+    D++ D+  +R++V+
Sbjct: 222 EAYIETAIDRIRTEMDRMNIE-GDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVN 280

Query: 250 KEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
              DCY  L +VH LW  + GRFK YI++P
Sbjct: 281 SINDCYAILGLVHTLWKPMPGRFKDYIAMP 310
to top
>RELA_STAAM (Q931Q4) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 736

 Score = 73.9 bits (180), Expect = 9e-14
 Identities = 34/90 (37%), Positives = 56/90 (62%)
 Frame = +1

Query: 70  EALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIHGLRLVVD 249
           EA I +A+D +   +    I   +++GR K++YS+Y KM K+    D++ D+  +R++V+
Sbjct: 222 EAYIETAIDRIRTEMDRMNIE-GDINGRPKHIYSIYRKMMKQKKQFDQIFDLLAIRVIVN 280

Query: 250 KEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
              DCY  L +VH LW  + GRFK YI++P
Sbjct: 281 SINDCYAILGLVHTLWKPMPGRFKDYIAMP 310
to top
>RELA_HAEIN (P44644) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 743

 Score = 73.2 bits (178), Expect = 2e-13
 Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
 Frame = +1

Query: 4   CFKHLNPEEHKELSSKFVETF--DEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVY 177
           CF++L+PE+++ ++    E     E  I   V  L   LRE  I    + GR K++YS++
Sbjct: 204 CFRYLHPEQYRAIAKLLQERRLDREHYIADFVSELSGYLRE-NIEQVEVYGRPKHIYSIW 262

Query: 178 SKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
            KMQKK+L    ++D+  +R++V K +DCY AL +VH  +  +   F  Y++ P
Sbjct: 263 RKMQKKHLEFSGLYDVRAVRIIVQKLQDCYTALGIVHTQFKHLPKEFDDYVANP 316
to top
>RELA_BACSU (O54408) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 734

 Score = 72.8 bits (177), Expect = 2e-13
 Identities = 35/112 (31%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
 Frame = +1

Query: 10  KHLNPEEHKELSS--KFVETFDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSK 183
           ++LNP+++  + +  K      E  +   V+ + + + E  I   + SGR K++YS+Y K
Sbjct: 193 RYLNPQQYYRIVNLMKKKRAERELYVDEVVNEVKKRVEEVNIKA-DFSGRPKHIYSIYRK 251

Query: 184 MQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
           M  +N   +E++D+  +R++V+  +DCY  L ++H  W  + GRFK YI++P
Sbjct: 252 MVLQNKQFNEIYDLLAVRILVNSIKDCYAVLGIIHTCWKPMPGRFKDYIAMP 303
to top
>RELA_STRCO (P52560) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 847

 Score = 72.4 bits (176), Expect = 3e-13
 Identities = 42/115 (36%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   LCFKHLNPEEHKELSSKFVETFD--EALITSAVDTLDEGLREAGISYHNLSGRNKNLYSV 174
           L F  L P+ + E+     E     +  +    D + + LR A I    ++GR K+ YSV
Sbjct: 287 LAFAILYPKMYDEIVRLVAERAPKRDEYLAVVTDEVQQDLRAARIKA-TVTGRPKHYYSV 345

Query: 175 YSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
           Y KM  +     E++D+ G+R++VD   DCY AL  VH  W  V GRFK YI++P
Sbjct: 346 YQKMIVRGRDFAEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMP 400
to top
>RELA_CORGL (O87331) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 760

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 40/115 (34%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   LCFKHLNPEEHKELSSKFVETFD--EALITSAVDTLDEGLREAGISYHNLSGRNKNLYSV 174
           L F  L P++++E+     +     +  +   +D +  GLRE  I+   L GR K+ +S+
Sbjct: 215 LSFAILYPKKYEEIVRLVADRAPSRDRYLKEIIDQVTGGLRENNIAAEVL-GRPKHYWSI 273

Query: 175 YSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
           Y KM  +    D++ D+ G+R++VD   +CY A+ VVH L+  + GRFK YIS P
Sbjct: 274 YQKMIVRGRDFDDIFDLVGIRILVDNVNNCYAAIGVVHSLFNALPGRFKDYISAP 328
to top
>RELA_STREQ (Q54089) Putative GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase) (Stringent response-like protein)
          Length = 739

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 38/115 (33%), Positives = 64/115 (55%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   LCFKHLNPEEHKELSSKFVETFDE--ALITSAVDTLDEGLREAGISYHNLSGRNKNLYSV 174
           L F++LN  E  ++S    E   E  AL+   V  +     E G+ + ++ GR K++YS+
Sbjct: 190 LAFRYLNETEFYKISHMMNEKRREREALVDDIVTKIKSYTTEQGL-FGDVYGRPKHIYSI 248

Query: 175 YSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
           Y KM+ K    D++ D+  +R V++ + D Y  +  +H+LW  + GRFK YI+ P
Sbjct: 249 YRKMRDKKKRFDQIFDLIAIRCVMETQSDVYAMVGYIHELWRPMPGRFKDYIAAP 303
to top
>RELA_MYCTU (P66014) Probable GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 790

 Score = 70.9 bits (172), Expect = 8e-13
 Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
 Frame = +1

Query: 1   LCFKHLNPEEHKELSSKFV------ETFDEALITSAVDTLDEGLREAGISYHNLSGRNKN 162
           L F  L+P++++E+           +T+   +    V+TL     +A +      GR K+
Sbjct: 243 LSFAILHPKKYEEIVRLVAGRAPSRDTYLAKVRAEIVNTLTASKIKATVE-----GRPKH 297

Query: 163 LYSVYSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
            +S+Y KM  K    D++HD+ G+R++ D+  DCY A+ VVH LW  + GRFK YI+ P
Sbjct: 298 YWSIYQKMIVKGRDFDDIHDLVGVRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQP 356
to top
>RELA_MYCBO (P66015) Probable GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 790

 Score = 70.9 bits (172), Expect = 8e-13
 Identities = 40/119 (33%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
 Frame = +1

Query: 1   LCFKHLNPEEHKELSSKFV------ETFDEALITSAVDTLDEGLREAGISYHNLSGRNKN 162
           L F  L+P++++E+           +T+   +    V+TL     +A +      GR K+
Sbjct: 243 LSFAILHPKKYEEIVRLVAGRAPSRDTYLAKVRAEIVNTLTASKIKATVE-----GRPKH 297

Query: 163 LYSVYSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
            +S+Y KM  K    D++HD+ G+R++ D+  DCY A+ VVH LW  + GRFK YI+ P
Sbjct: 298 YWSIYQKMIVKGRDFDDIHDLVGVRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQP 356
to top
>RELA_MYCLE (Q49640) Probable GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 787

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 39/119 (32%), Positives = 64/119 (53%), Gaps = 6/119 (5%)
 Frame = +1

Query: 1   LCFKHLNPEEHKELSSKFV------ETFDEALITSAVDTLDEGLREAGISYHNLSGRNKN 162
           L F  L+P++++E+           +T+   +    + TL     +A +      GR K+
Sbjct: 240 LSFAILHPKKYEEIVRLVAGRAPSRDTYLAKVRAEIISTLGASKIKATVE-----GRPKH 294

Query: 163 LYSVYSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
            +S+Y KM  K    D++HD+ G+R++ D+  DCY A+ VVH LW  + GRFK YI+ P
Sbjct: 295 YWSIYQKMIVKGRDFDDIHDLVGIRILCDEIRDCYAAVGVVHSLWQPMAGRFKDYIAQP 353
to top
>RELA_STRAT (O85709) GTP pyrophosphokinase (EC 2.7.6.5) (ATP:GTP|
           3'-pyrophosphotransferase) (ppGpp synthetase I)
           ((P)ppGpp synthetase)
          Length = 841

 Score = 68.2 bits (165), Expect = 5e-12
 Identities = 40/115 (34%), Positives = 59/115 (51%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   LCFKHLNPEEHKELSSKFVETFD--EALITSAVDTLDEGLREAGISYHNLSGRNKNLYSV 174
           L F  L P+ + E+     E     +  +    D +   LR   I    ++GR K+ YSV
Sbjct: 284 LAFAILYPKMYDEIVRLVAERAPKRDEYLAIVTDEVQSDLRARRIKA-TVTGRPKHYYSV 342

Query: 175 YSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
           Y K+  +     E++D+ G+R++VD   DCY AL  VH  W  V GRFK YI++P
Sbjct: 343 YQKIIVRGRDFAEIYDLVGIRVLVDTVRDCYAALGTVHARWNPVPGRFKDYIAMP 397
to top
>SPOT_SPICI (O34098) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase|
           (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate
           guanosine-3'-pyrophosphohydrolase)
          Length = 749

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 35/117 (29%), Positives = 67/117 (57%), Gaps = 4/117 (3%)
 Frame = +1

Query: 1   LCFKHLNPEEHKELSSKFVETFDEALITSAVDTLDEGLREAGISYHNLS----GRNKNLY 168
           + FK +NP ++ ++ S    +  E    + ++   E L++  I+   +S    GR+K++Y
Sbjct: 189 ISFKIINPVQYNKIVSLLESSNKER--ENTINQKIEELKKILITEKKMSVKVYGRSKSIY 246

Query: 169 SVYSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
           S+Y KM +     D++HDI  +R++ +  +DCY+ L  VH+ +  ++ RFK YI+ P
Sbjct: 247 SIYRKMNQFGKNFDDIHDILAVRIITNSVDDCYKVLGFVHQHYTPLNNRFKDYIATP 303
to top
>SPOT_SHIFL (P0AG26) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase|
           (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate
           guanosine-3'-pyrophosphohydrolase)
          Length = 702

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   LCFKHLNPEEHKELSS--KFVETFDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSV 174
           L F+ L P  ++ +    K      + +I   +  ++  L+EAGI    +SGR K+LYS+
Sbjct: 185 LGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCR-VSGREKHLYSI 243

Query: 175 YSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
           Y KM  K      + DI+  R++V+  + CYR L  +H L+    GR K YI++P
Sbjct: 244 YCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIP 298
to top
>SPOT_ECOLI (P0AG24) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase|
           (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate
           guanosine-3'-pyrophosphohydrolase)
          Length = 702

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   LCFKHLNPEEHKELSS--KFVETFDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSV 174
           L F+ L P  ++ +    K      + +I   +  ++  L+EAGI    +SGR K+LYS+
Sbjct: 185 LGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCR-VSGREKHLYSI 243

Query: 175 YSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
           Y KM  K      + DI+  R++V+  + CYR L  +H L+    GR K YI++P
Sbjct: 244 YCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIP 298
to top
>SPOT_ECO57 (P0AG25) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase|
           (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate
           guanosine-3'-pyrophosphohydrolase)
          Length = 702

 Score = 65.9 bits (159), Expect = 2e-11
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   LCFKHLNPEEHKELSS--KFVETFDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSV 174
           L F+ L P  ++ +    K      + +I   +  ++  L+EAGI    +SGR K+LYS+
Sbjct: 185 LGFEALYPNRYRVIKEVVKAARGNRKEMIQKILSEIEGRLQEAGIPCR-VSGREKHLYSI 243

Query: 175 YSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
           Y KM  K      + DI+  R++V+  + CYR L  +H L+    GR K YI++P
Sbjct: 244 YCKMVLKEQRFHSIMDIYAFRVIVNDSDTCYRVLGQMHSLYKPRPGRVKDYIAIP 298
to top
>SPOT_HAEIN (P43811) Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase|
           (EC 3.1.7.2) ((ppGpp)ase) (Penta-phosphate
           guanosine-3'-pyrophosphohydrolase)
          Length = 677

 Score = 61.6 bits (148), Expect = 5e-10
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
 Frame = +1

Query: 1   LCFKHLNPEEHKELSSKFVETFD---EALITSAVDTLDEGLREAGISYHNLSGRNKNLYS 171
           L F+ ++P  + E+  K V+      + LI      +   L  +GI +  + GR K+LY 
Sbjct: 158 LSFQAMHPHRY-EVLKKLVDVARSNRQDLIERISQEIKVRLENSGI-FARVWGREKHLYK 215

Query: 172 VYSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
           +Y KM+ K+     + DI+  R++V   +DCYR L  +H L+    GR K YI++P
Sbjct: 216 IYQKMRIKDQEFHSIMDIYAFRVIVKNVDDCYRVLGQMHNLYKPRPGRVKDYIAVP 271
to top
>SPOT_MYCPN (P75386) Probable guanosine-3',5'-bis(diphosphate)|
           3'-pyrophosphohydrolase (EC 3.1.7.2) ((ppGpp)ase)
           (Penta-phosphate guanosine-3'-pyrophosphohydrolase)
          Length = 733

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 2/115 (1%)
 Frame = +1

Query: 1   LCFKHLNPEEHKELSSKFVE--TFDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSV 174
           L FK L+P+      SK  +   F +    +    L+E L +  I Y  L  R K +YS 
Sbjct: 208 LSFKVLDPKNFNNTLSKINQQKVFYDNEWGNFKKQLEEMLEQNQIEYR-LESRIKGIYST 266

Query: 175 YSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
           Y K+      + ++HD+  +RL+V  E DCY  L ++H  +  +   FK YI+ P
Sbjct: 267 YQKLTFHEQNIAKIHDLFAIRLIVKSELDCYHLLGLIHLNFTVLMKHFKDYIASP 321
to top
>SPOT_MYCGE (P47520) Probable guanosine-3',5'-bis(diphosphate)|
           3'-pyrophosphohydrolase (EC 3.1.7.2) ((ppGpp)ase)
           (Penta-phosphate guanosine-3'-pyrophosphohydrolase)
          Length = 720

 Score = 48.1 bits (113), Expect = 5e-06
 Identities = 22/68 (32%), Positives = 35/68 (51%)
 Frame = +1

Query: 136 HNLSGRNKNLYSVYSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLWPQVDGR 315
           + L  R K +YS Y K+      + ++HD+  +RL+   E DCY  L ++H  +      
Sbjct: 241 YQLESRIKGIYSTYKKLTVHEQNISKIHDLFAIRLITKSELDCYHILGLIHLNFLIDSKY 300

Query: 316 FKYYISLP 339
           FK YI+ P
Sbjct: 301 FKDYIASP 308
to top
>MIAA_FRATT (Q5NH42) tRNA delta(2)-isopentenylpyrophosphate transferase (EC|
           2.5.1.8) (IPP transferase) (Isopentenyl-diphosphate:tRNA
           isopentenyltransferase) (IPTase) (IPPT)
          Length = 308

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 24/87 (27%), Positives = 44/87 (50%)
 Frame = +1

Query: 64  FDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIHGLRLV 243
           + E + TS V  LDE L+   +  ++ S  +KN+ S + +M  +   +DEV ++H    +
Sbjct: 175 YSELVKTSKVGGLDEDLKLCALVPNDRSILHKNIESRFRQMLDQGF-LDEVQNLH-KNPM 232

Query: 244 VDKEEDCYRALDVVHKLWPQVDGRFKY 324
           + KE    R++    + W  +DG   Y
Sbjct: 233 LTKETTAIRSVG-YRQAWEYLDGDISY 258
to top
>SNU23_YEAST (Q12368) 23 kDa U4/U6.U5 small nuclear ribonucleoprotein component|
          Length = 194

 Score = 32.3 bits (72), Expect = 0.30
 Identities = 23/68 (33%), Positives = 32/68 (47%)
 Frame = +1

Query: 13  HLNPEEHKELSSKFVETFDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQK 192
           HLN   HK  + KF   FDE LI    D  D    E  + YHNL      + S+ ++ ++
Sbjct: 98  HLN---HKVHAIKFENLFDEPLIIDIRDNDDVPQEEFELCYHNLIKDFVEVRSMETQSKR 154

Query: 193 KNLTMDEV 216
           K L   +V
Sbjct: 155 KRLLDTDV 162
to top
>NEUR4_MOUSE (Q8BZL1) Sialidase-4 (EC 3.2.1.18) (Neuraminidase 4)|
           (N-acetyl-alpha-neuraminidase 4)
          Length = 501

 Score = 32.0 bits (71), Expect = 0.39
 Identities = 13/31 (41%), Positives = 15/31 (48%)
 Frame = -1

Query: 259 LPPCQPQGAGHGYHGLHPLSNSSSASWSKHC 167
           LP C PQ      HGL P S+    SW+  C
Sbjct: 351 LPLCYPQSRSPENHGLEPGSDGDKTSWTPEC 381
to top
>ATX1_PLAFA (Q04956) Probable cation-transporting ATPase 1 (EC 3.6.3.-)|
          Length = 1956

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
 Frame = +1

Query: 19   NPEEHKEL--SSKFVETFDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQK 192
            +PE+ KEL   SK    +DE L         +G+R   ISY  +  +N NL +V     +
Sbjct: 951  SPEKIKELCLKSKIPNNYDEILNKYT----KQGMRILSISYKRVKSKNINLLNVKRSFVE 1006

Query: 193  KNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKL 294
             NL        H L  ++        A D++H L
Sbjct: 1007 SNL--------HFLGFLIFTNNMKKNAPDIIHNL 1032
to top
>GCP_STRCO (O86793) Probable O-sialoglycoprotein endopeptidase (EC 3.4.24.57)|
           (Glycoprotease)
          Length = 374

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +1

Query: 25  EEHKELSSKFVETFDEALITSAVDTLDEGLREAGISYHNLSG 150
           +EH        E    A + + V T+D  L+EAG+S  +L G
Sbjct: 40  DEHARFGGVVPEVASRAHLEAMVPTIDRALKEAGVSARDLDG 81
to top
>YWAC_BACSU (P39583) Hypothetical protein ywaC|
          Length = 210

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 23/99 (23%), Positives = 42/99 (42%), Gaps = 15/99 (15%)
 Frame = +1

Query: 88  AVDTLDEGLREAGISYHNLSGRN---------KNLYSVYSKMQKKNLTM------DEVHD 222
           A+D LD         Y+ + G N         K+  S+ +K+ +K   +      + +HD
Sbjct: 28  ALDALDTKFSIISQEYNLIHGHNPIEHTKSRVKSFESIVNKLMRKGCEITTKEMKEHIHD 87

Query: 223 IHGLRLVVDKEEDCYRALDVVHKLWPQVDGRFKYYISLP 339
           I G+R++     D Y  ++V+ +       + K YI  P
Sbjct: 88  IAGVRIICSFISDIYNVVNVLKQHEDLRIVKVKDYIQTP 126
to top
>TILS_HAEIN (P44689) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 430

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 15/36 (41%), Positives = 22/36 (61%)
 Frame = -1

Query: 262 NLPPCQPQGAGHGYHGLHPLSNSSSASWSKHCKGFC 155
           +LPP   + A H +HGL P    ++ SW+KHC+  C
Sbjct: 45  HLPPLSIR-AIHIHHGLSP----NADSWAKHCQDLC 75
to top
>HUTU_THEVO (Q978N4) Probable urocanate hydratase (EC 4.2.1.49) (Urocanase)|
           (Imidazolonepropionate hydrolase)
          Length = 553

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 19/63 (30%), Positives = 33/63 (52%)
 Frame = +1

Query: 34  KELSSKFVETFDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDE 213
           + L  K+++T+ ++L   A+   DE L+    +   L G   N  +VY ++ KKN+  D 
Sbjct: 202 RRLRDKYLDTWTDSL-DEALRLKDEALKSGKPTSIGLLG---NAATVYDELMKKNIVPDV 257

Query: 214 VHD 222
           V D
Sbjct: 258 VSD 260
to top
>URE1_BRAJA (Q89UG0) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase|
           alpha subunit)
          Length = 572

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = +1

Query: 94  DTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEV-HDIHGLRLVVDKEEDCYR 270
           +T+DE L    + +H      ++L    S+++K+ +  +++ HD+  L ++    +   R
Sbjct: 310 NTIDEHLDMLMVCHHLDPSIAEDLAFAESRIRKETIAAEDILHDLGALSMMSSDSQAMGR 369

Query: 271 ALDVVHKLWPQVDGRFKYYISLP 339
             +V+ + W   D   K   SLP
Sbjct: 370 LGEVIIRTWQTADKMKKQRGSLP 392
to top
>URE1_GEOKA (Q5KYM1) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase|
           alpha subunit)
          Length = 569

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
 Frame = +1

Query: 94  DTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEV-HDIHGLRLVVDKEEDCYR 270
           +TLDE L    + +H      +++    S+++K+ +  +++ HDI    ++    +   R
Sbjct: 309 NTLDEHLDMLMVCHHLDPSVPEDIAFADSRIRKETIAAEDILHDIGAFSMISSDSQAMGR 368

Query: 271 ALDVVHKLWPQVDGRFKYYISLP 339
             +V+ + W   D   K +  LP
Sbjct: 369 VGEVILRTWQTADKMKKQFGRLP 391
to top
>ZN451_MOUSE (Q8C0P7) Zinc finger protein 451|
          Length = 1056

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 147 WKEQKPLQCLLQDAEEEFDNG 209
           W+ +KP+ C +    +EFDNG
Sbjct: 163 WRSEKPILCPIMHCNKEFDNG 183
to top
>VP35_NPVBM (P31354) Early 35 kDa protein (p35) (Apoptosis preventing protein)|
          Length = 299

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 7/96 (7%)
 Frame = +1

Query: 19  NPEEHKELSSKFVETFD--EALITSAVDTLDEGLREAGISYHNLSGRNKN-LYSVYSKMQ 189
           N +    + SK  E FD  E   +  +D   + ++     ++++S +N + L S ++K+ 
Sbjct: 60  NNDLRDRIKSKVDEQFDQLEREYSDKIDGFHDNIQYFKDEHYSVSCQNGSVLKSKFAKIL 119

Query: 190 KKNLTMD----EVHDIHGLRLVVDKEEDCYRALDVV 285
           K +   D    E ++ + L  +VDK  DCY A+ V+
Sbjct: 120 KSHDYTDKKSIETYEKYCLPQLVDKHNDCYVAVCVL 155
to top
>YPWA_BACSU (P50848) Hypothetical metalloprotease ypwA (EC 3.4.24.-)|
          Length = 501

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 9/63 (14%)
 Frame = +1

Query: 52  FVETFDEALI-TSAVDTLDEGLREA-GISYHNLSGRNKNLYSVY-------SKMQKKNLT 204
           + +  DEAL  T+  D    G+ E+  + Y N  GRNK+ ++ Y       S +Q K+++
Sbjct: 272 YEQNIDEALSGTNLSDGASMGIHESQSLFYENFIGRNKHFWTPYYKKIQEASPVQFKDIS 331

Query: 205 MDE 213
           +D+
Sbjct: 332 LDD 334
to top
>SGO1_YEAST (Q08490) Shugoshin|
          Length = 590

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
 Frame = +1

Query: 19  NPEEHKELSSKFVETFDEALITSAVDT--------LDEGLREAGISYHNLSGRNKNLYSV 174
           N  E+K+ S++  + F  A++ +  D           +G      +Y+N    N N+ +V
Sbjct: 494 NKSENKKKSTRTKKLFKNAIVNNLSDENSTTRPSKSSKGTSNNNNNYNNFDNNNSNINNV 553

Query: 175 YSKMQKKNLTMDE--VHDIHGLRLVVDKEEDCYR 270
            +K     L  D+  V D+ G    V  +   YR
Sbjct: 554 NNKSVSFRLNEDDLAVFDLFGNGKAVKHQPKTYR 587
to top
>OSTM1_HUMAN (Q86WC4) Osteopetrosis-associated transmembrane protein 1 precursor|
          Length = 334

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = +1

Query: 157 KNLYSVYSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRALDVVHKLW 297
           K L S+YS+MQK N   ++     G  L +D E+    A+++  KLW
Sbjct: 229 KTLSSLYSEMQKMNELENKAEP--GTHLCIDVED----AMNITRKLW 269
to top
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)|
          Length = 2716

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -1

Query: 268 GSNLPPCQPQGAGHGYHGLHP 206
           GS  PP  PQG G+G  G+HP
Sbjct: 783 GSPTPPQGPQGYGNGPTGMHP 803
to top
>YACL_BACSU (Q06754) Hypothetical protein yacL|
          Length = 366

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = +1

Query: 160 NLYSVYSKMQKKNLTMDEVHDIHGLRLVV 246
           +L+S+ ++MQKK  T DE H++   +L +
Sbjct: 141 SLFSISARMQKKKGTADEEHEVQDKKLKI 169
to top
>SYQ_DROME (Q9Y105) Probable glutaminyl-tRNA synthetase (EC 6.1.1.18)|
           (Glutamine--tRNA ligase) (GlnRS)
          Length = 778

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +1

Query: 7   FKHLNPEEHKELSSKFVETFDEALITSAVDTLDEGLREAGI 129
           FKH NPE+  E+   F+    E  ++  V   D  L +A +
Sbjct: 700 FKHKNPEDPNEVPGGFLSDISEQSMSVVVAFADRALNQAKV 740
to top
>INVA_YERPS (P11922) Invasin|
          Length = 985

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +1

Query: 37  ELSSKFVETFDEALITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTM 207
           +++ +  E+F   L  SAV     G R    S +NL  RN N+   Y K Q   LT+
Sbjct: 347 QMNYRLGESFQSQLSPSAV----AGTRLLAESRYNLVDRNNNIVLEYQKQQVVKLTL 399
to top
>ATM_SCHPO (O74630) Serine/threonine-protein kinase tel1 (EC 2.7.11.1)|
            (DNA-damage checkpoint kinase tel1) (Telomere length
            regulation protein 1) (ATM homolog)
          Length = 2812

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -1

Query: 316  IFHQLGARVYGQHRVLGSNLPP-CQPQGAGHGYHGLHPL 203
            +F+QL AR+  ++     +L   C   G  H YH LH L
Sbjct: 2303 VFYQLAARLMNENSKFQQSLTSICYNVGRNHPYHSLHVL 2341
to top
>URE1_RHOPA (Q6N3N3) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase|
           alpha subunit)
          Length = 570

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 18/83 (21%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
 Frame = +1

Query: 94  DTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEV-HDIHGLRLVVDKEEDCYR 270
           +T+DE L    + +H      ++L    S+++K+ +  +++ HD+  L ++    +   R
Sbjct: 309 NTIDEHLDMLMVCHHLDPSIAEDLAFAESRIRKETIAAEDILHDLGALSMMSSDSQAMGR 368

Query: 271 ALDVVHKLWPQVDGRFKYYISLP 339
             +V+ + W   D   K   +LP
Sbjct: 369 LGEVIIRTWQTADKMKKQRGALP 391
to top
>ESTR_ACIAD (P52667) HTH-type transcriptional regulator estR (Esterase operon|
           transcriptional regulator)
          Length = 301

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 3/83 (3%)
 Frame = +1

Query: 31  HKELSSKFVETFDEALITSAVDTLD---EGLREAGISYHNLSGRNKNLYSVYSKMQKKNL 201
           H+  S K VE  +   +   V  L     GL+ A I+        +NLY V +K  K ++
Sbjct: 129 HEAQSEKIVERLEHGNLDMVVLALPFDTRGLKVADIA-------KENLYLVCNKHDKHSV 181

Query: 202 TMDEVHDIHGLRLVVDKEEDCYR 270
               + D+   RL++ +E  C R
Sbjct: 182 NAHSLDDLDLSRLMLLEEGHCLR 204
to top
>TILS_ERWCT (Q6D8C5) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 440

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -1

Query: 235 AGHGYHGLHPLSNSSSASWSKHCKGFC 155
           A + +HGL+PL++S    W++HC+  C
Sbjct: 54  AAYIHHGLNPLADS----WAEHCRQQC 76
to top
>LMNA_XENLA (P11048) Lamin-A|
          Length = 665

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 16/61 (26%), Positives = 33/61 (54%)
 Frame = +1

Query: 94  DTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRA 273
           D  D   RE   S   L+ +++ +  + ++MQ++   +DE  ++  ++L +D E + YR 
Sbjct: 318 DLEDAYARERDSSRRLLADKDREMAEMRARMQQQ---LDEYQELLDIKLALDMEINAYRK 374

Query: 274 L 276
           L
Sbjct: 375 L 375
to top
>DUS6_RAT (Q64346) Dual specificity protein phosphatase 6 (EC 3.1.3.48) (EC|
           3.1.3.16) (Mitogen-activated protein kinase phosphatase
           3) (MAP kinase phosphatase 3) (MKP-3)
          Length = 381

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
 Frame = +1

Query: 88  AVDTLDEGL-REAGISYHNLSGRNKNL-YSVYSKMQKKNLTMDEVHDI 225
           A+  +DE   +  G+  H L+G ++++  +V   MQK NL+M++ +DI
Sbjct: 275 AISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDI 322
to top
>DUS6_MOUSE (Q9DBB1) Dual specificity protein phosphatase 6 (EC 3.1.3.48) (EC|
           3.1.3.16) (Mitogen-activated protein kinase phosphatase
           3) (MAP kinase phosphatase 3) (MKP-3)
          Length = 381

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
 Frame = +1

Query: 88  AVDTLDEGL-REAGISYHNLSGRNKNL-YSVYSKMQKKNLTMDEVHDI 225
           A+  +DE   +  G+  H L+G ++++  +V   MQK NL+M++ +DI
Sbjct: 275 AISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDI 322
to top
>DUS6_HUMAN (Q16828) Dual specificity protein phosphatase 6 (EC 3.1.3.48) (EC|
           3.1.3.16) (Mitogen-activated protein kinase phosphatase
           3) (MAP kinase phosphatase 3) (MKP-3) (Dual specificity
           protein phosphatase PYST1)
          Length = 381

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 16/48 (33%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
 Frame = +1

Query: 88  AVDTLDEGL-REAGISYHNLSGRNKNL-YSVYSKMQKKNLTMDEVHDI 225
           A+  +DE   +  G+  H L+G ++++  +V   MQK NL+M++ +DI
Sbjct: 275 AISFIDEARGKNCGVLVHCLAGISRSVTVTVAYLMQKLNLSMNDAYDI 322
to top
>CHIA_HUMAN (Q9BZP6) Acidic mammalian chitinase precursor (EC 3.2.1.14)|
           (AMCase) (TSA1902)
          Length = 476

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 10/28 (35%), Positives = 20/28 (71%)
 Frame = -1

Query: 220 HGLHPLSNSSSASWSKHCKGFCSFQKDC 137
           +GL+P++N+ +A W  HC    ++Q++C
Sbjct: 435 NGLYPVANNRNAFW--HCVNGVTYQQNC 460
to top
>ITIH3_MOUSE (Q61704) Inter-alpha-trypsin inhibitor heavy chain H3 precursor|
           (ITI heavy chain H3) (Inter-alpha-inhibitor heavy chain
           3)
          Length = 886

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 127 ISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIH 228
           ++Y  L  RNK  Y +Y K+Q K L      D H
Sbjct: 151 LTYEELLKRNKGKYEMYLKVQPKQLVRHFEIDAH 184
to top
>TILS_XYLFT (Q87BE2) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 437

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 229 HGYHGLHPLSNSSSASWSKHCKGFCS 152
           H +HGL    N ++ +W+ HC  FC+
Sbjct: 49  HIHHGL----NENADAWTAHCAAFCT 70
to top
>TILS_XYLFA (Q9PFJ8) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)|
           (tRNA(Ile)-lysidine synthetase)
           (tRNA(Ile)-2-lysyl-cytidine synthase)
          Length = 437

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 229 HGYHGLHPLSNSSSASWSKHCKGFCS 152
           H +HGLH  +++    W+ HC  FC+
Sbjct: 49  HIHHGLHEHADA----WTAHCAAFCT 70
to top
>ITIH3_RAT (Q63416) Inter-alpha-trypsin inhibitor heavy chain H3 precursor|
           (ITI heavy chain H3) (Inter-alpha-inhibitor heavy chain
           3)
          Length = 887

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = +1

Query: 127 ISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIH 228
           ++Y  L  RNK  Y +Y K+Q K L      D H
Sbjct: 154 LTYEELLKRNKGKYEMYLKVQPKQLVRHFEIDAH 187
to top
>VWF_HUMAN (P04275) Von Willebrand factor precursor (vWF) [Contains: Von|
            Willebrand antigen II]
          Length = 2813

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
 Frame = -2

Query: 222  IMDFIHCQILLLHLGVNTVKVFVPSRKIVI--*DACFPQTFIQCIHSRCD*CLIKG 61
            + D  HCQ+LLL L     KV  P+    I   D+C  +   + I S    C   G
Sbjct: 2133 VPDSSHCQVLLLPLFAECHKVLAPATFYAICQQDSCHQEQVCEVIASYAHLCRTNG 2188
to top
>RECF_PARUW (Q6MAG9) DNA replication and repair protein recF|
          Length = 359

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +1

Query: 133 YHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIHGLRLVVDKEED 261
           YH LSG N  L   Y  +   NL++DE+  +   +L  +++ +
Sbjct: 205 YHLLSGENDLLTLEYRSIANSNLSIDEIKKLLVKQLCKNRQRE 247
to top
>FPS1_YEAST (P23900) Glycerol uptake/efflux facilitator protein|
          Length = 669

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +1

Query: 40  LSSKFVETFDEALITSAVDTLDEGLREAGISYHNLSGRNKN 162
           LSS+ V T D +   S   + DEG   +  S+H+  G N N
Sbjct: 12  LSSESVHTHDSSRKQSNKQSSDEGRSSSQPSHHHSGGTNNN 52
to top
>ROC2_NICSY (Q08937) 29 kDa ribonucleoprotein B, chloroplast precursor (CP29B)|
          Length = 291

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 12/35 (34%), Positives = 23/35 (65%)
 Frame = -3

Query: 131 EMPASLRPSSSVSTADVISASSKVSTNFDDSSLCS 27
           + P+SL+P+S++S   + S+S  +S +   + LCS
Sbjct: 17  QTPSSLKPNSTLSFFSLPSSSLNLSLSSSSTGLCS 51
to top
>LMNA_PIG (Q3ZD69) Lamin-A/C|
          Length = 664

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 16/61 (26%), Positives = 31/61 (50%)
 Frame = +1

Query: 94  DTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKNLTMDEVHDIHGLRLVVDKEEDCYRA 273
           D  D   RE   S   L+ + + +  + ++MQ++   +DE  ++  ++L +D E   YR 
Sbjct: 322 DLEDSLARERDTSRRLLADKEREMAEMRARMQQQ---LDEYQELLDIKLALDMEIHAYRK 378

Query: 274 L 276
           L
Sbjct: 379 L 379
to top
>BRE1_DEBHA (Q6BWW6) Ubiquitin-protein ligase BRE1 (EC 6.3.2.-)|
          Length = 691

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 19/84 (22%), Positives = 44/84 (52%), Gaps = 10/84 (11%)
 Frame = +1

Query: 34  KELSSKFVETFDEAL-----ITSAVDTLDEGLREAGISYHNLSGRNKNLYSVYSKMQKKN 198
           KEL ++    +D+ +     ++  ++ L+E      +SY  L+  NK L    + +QK N
Sbjct: 265 KELMNQINTNYDKVVKENLQLSDKLENLNENDLINSVSYQELAAHNKQLNESVNNLQKIN 324

Query: 199 -LTMDEVHDIH----GLRLVVDKE 255
             T+++++++      ++ ++DKE
Sbjct: 325 DTTVNKLNELENKQTNVKHLLDKE 348


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,658,860
Number of Sequences: 219361
Number of extensions: 1057558
Number of successful extensions: 3629
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 3544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3623
length of database: 80,573,946
effective HSP length: 88
effective length of database: 61,270,178
effective search space used: 1470484272
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top