ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet69b10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome... 238 1e-59
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 238 1e-59
3dbj|AK058631.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 1e-59
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 238 1e-59
5gb|BT016784.1| Zea mays clone Contig617 mRNA sequence 78 2e-11
6gb|AY104354.1| Zea mays PCO108571 mRNA sequence 76 8e-11
7ref|XM_474305.1| Oryza sativa (japonica cultivar-group), predic... 66 8e-08
8dbj|AK100753.1| Oryza sativa (japonica cultivar-group) cDNA clon... 66 8e-08
9emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 64 3e-07
10dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 64 3e-07
11gb|DQ351282.1| Oryza rufipogon unknown gene 64 3e-07
12emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 64 3e-07
13gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 46 0.073
14ref|NM_111140.4| Arabidopsis thaliana hydrolase, acting on glyco... 44 0.29
15gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC... 44 0.29
16gb|AC021640.7|ATAC021640 Arabidopsis thaliana chromosome III BAC... 44 0.29
17gb|BT000947.1| Arabidopsis thaliana clone C104919 unknown protei... 44 0.29
18emb|X66502.1|CCMCPA C. crescentus mcpA gene 44 0.29
19gb|AE005716.1| Caulobacter crescentus CB15 section 42 of 359 of ... 44 0.29
20emb|BX822658.1|CNS0A5YZ Arabidopsis thaliana Full-length cDNA Co... 44 0.29
21emb|BX824747.1|CNS0A5KB Arabidopsis thaliana Full-length cDNA Co... 44 0.29
22emb|BX824730.1|CNS0A5RJ Arabidopsis thaliana Full-length cDNA Co... 44 0.29
23emb|BX823263.1|CNS0A5CL Arabidopsis thaliana Full-length cDNA Co... 44 0.29
24emb|BX822838.1|CNS0A4PN Arabidopsis thaliana Full-length cDNA Co... 44 0.29
25emb|AL450306.14| Human DNA sequence from clone RP13-39P12 on chr... 42 1.1
26emb|AL391421.27| Human DNA sequence from clone RP11-126H7 on chr... 42 1.1
27emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete ... 42 1.1
28gb|AF352033.1| Homo sapiens DLG5 gene, exons 2 through 32 and co... 42 1.1
29gb|AE009594.1| Brucella melitensis 16M chromosome I, section 151... 42 1.1
30gb|AY899213.1| Streptomyces aizunensis strain NRRL B-11277 thioe... 42 1.1
31ref|XM_465447.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
32ref|XM_478448.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
33gb|AC010212.10| Drosophila melanogaster clone BACR32D05, complet... 40 4.5
34ref|XM_001005865.1| PREDICTED: Mus musculus hypothetical protein... 40 4.5
35ref|XM_905189.2| PREDICTED: Mus musculus hypothetical protein 64... 40 4.5
36ref|XM_486328.4| PREDICTED: Mus musculus hypothetical protein 64... 40 4.5
37ref|XM_743168.1| Aspergillus fumigatus Af293 ABC multidrug trans... 40 4.5
38gb|BT015262.1| Drosophila melanogaster LD40317 full insert cDNA 40 4.5
39gb|AC166575.1| Mus musculus BAC clone RP23-99E16 from chromosome... 40 4.5
40gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 4.5
41gb|AC111086.18| Mus musculus chromosome 7, clone RP23-152P5, com... 40 4.5
42gb|AC166172.1| Mus musculus BAC clone RP23-106N22 from chromosom... 40 4.5
43emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 40 4.5
44emb|BX640431.1| Bordetella parapertussis strain 12822, complete ... 40 4.5
45emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genom... 40 4.5
46gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 4.5
47gb|AC159616.2| Mus musculus BAC clone RP24-497G20 from chromosom... 40 4.5
48dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 4.5
49ref|NM_141399.1| Drosophila melanogaster CG9727-RA (CG9727), mRNA 40 4.5
50dbj|AK141001.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 4.5
51dbj|AK032609.1| Mus musculus adult male olfactory brain cDNA, RI... 40 4.5
52dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
53dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
54dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 4.5
55dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
56gb|AE005075.1| Halobacterium sp. NRC-1 section 106 of 170 of the... 40 4.5
57dbj|AP005608.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
58dbj|AP005696.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
59dbj|AK119496.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
60dbj|AK105311.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
61emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 4.5
62emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromo... 40 4.5
63gb|AE003675.4| Drosophila melanogaster chromosome 3R, section 9 ... 40 4.5
64emb|AJ535050.1|OSA535050 Oryza sativa (japonica cultivar-group) ... 40 4.5
65emb|CR974582.5| Mouse DNA sequence from clone RP23-84L8 on chrom... 40 4.5
66gb|AF509565.1| Streptomyces sp. JP95 griseorhodin biosynthesis g... 40 4.5 
>gb|AC146334.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1356F10,
              complete sequence
          Length = 170681

 Score =  238 bits (120), Expect = 1e-59
 Identities = 203/230 (88%), Gaps = 3/230 (1%)
 Strand = Plus / Plus

                                                                          
Query: 111    atggcgccgtccaagaaggtgctgatgctgtgcggcgactacatggaggactacgaggcg 170
              ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 160970 atggcaccgtgcaagaaggtgctgatgctgtgcggcgactacatggaggactacgaggcc 161029

                                                                          
Query: 171    gccgtgcccttctacgcgctggccggcctgggcgtcgccgtccactgcgccgcgccggg- 229
              |||||||| ||||||||||| ||||   | |||||||||||| |||||| ||||||||| 
Sbjct: 161030 gccgtgccgttctacgcgctcgccgcgttcggcgtcgccgtcgactgcgtcgcgccgggg 161089

                                                                          
Query: 230    --caaggcccccggcgacccctgccccaccgccgtgcacgacttcctcggctacgacctc 287
                 ||| ||||||||||| |||||| ||||||||| ||||| ||||||||| ||||||||
Sbjct: 161090 aagaagccccccggcgacgcctgcctcaccgccgtccacgagttcctcggccacgacctc 161149

                                                                
Query: 288    tacacggagctccccggccaccgcttccgcgtcaccgccgacttcgccgc 337
              ||||| |||||||| |||||||| |||   ||||||||||||||||||||
Sbjct: 161150 tacaccgagctcccgggccaccggttcgcggtcaccgccgacttcgccgc 161199
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  238 bits (120), Expect = 1e-59
 Identities = 203/230 (88%), Gaps = 3/230 (1%)
 Strand = Plus / Plus

                                                                            
Query: 111      atggcgccgtccaagaaggtgctgatgctgtgcggcgactacatggaggactacgaggcg 170
                ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 21637451 atggcaccgtgcaagaaggtgctgatgctgtgcggcgactacatggaggactacgaggcc 21637510

                                                                            
Query: 171      gccgtgcccttctacgcgctggccggcctgggcgtcgccgtccactgcgccgcgccggg- 229
                |||||||| ||||||||||| ||||   | |||||||||||| |||||| ||||||||| 
Sbjct: 21637511 gccgtgccgttctacgcgctcgccgcgttcggcgtcgccgtcgactgcgtcgcgccgggg 21637570

                                                                            
Query: 230      --caaggcccccggcgacccctgccccaccgccgtgcacgacttcctcggctacgacctc 287
                   ||| ||||||||||| |||||| ||||||||| ||||| ||||||||| ||||||||
Sbjct: 21637571 aagaagccccccggcgacgcctgcctcaccgccgtccacgagttcctcggccacgacctc 21637630

                                                                  
Query: 288      tacacggagctccccggccaccgcttccgcgtcaccgccgacttcgccgc 337
                ||||| |||||||| |||||||| |||   ||||||||||||||||||||
Sbjct: 21637631 tacaccgagctcccgggccaccggttcgcggtcaccgccgacttcgccgc 21637680
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>dbj|AK058631.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-C10, full
           insert sequence
          Length = 1357

 Score =  238 bits (120), Expect = 1e-59
 Identities = 203/230 (88%), Gaps = 3/230 (1%)
 Strand = Plus / Plus

                                                                       
Query: 111 atggcgccgtccaagaaggtgctgatgctgtgcggcgactacatggaggactacgaggcg 170
           ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 69  atggcaccgtgcaagaaggtgctgatgctgtgcggcgactacatggaggactacgaggcc 128

                                                                       
Query: 171 gccgtgcccttctacgcgctggccggcctgggcgtcgccgtccactgcgccgcgccggg- 229
           |||||||| ||||||||||| ||||   | |||||||||||| |||||| ||||||||| 
Sbjct: 129 gccgtgccgttctacgcgctcgccgcgttcggcgtcgccgtcgactgcgtcgcgccgggg 188

                                                                       
Query: 230 --caaggcccccggcgacccctgccccaccgccgtgcacgacttcctcggctacgacctc 287
              ||| ||||||||||| |||||| ||||||||| ||||| ||||||||| ||||||||
Sbjct: 189 aagaagccccccggcgacgcctgcctcaccgccgtccacgagttcctcggccacgacctc 248

                                                             
Query: 288 tacacggagctccccggccaccgcttccgcgtcaccgccgacttcgccgc 337
           ||||| |||||||| |||||||| |||   ||||||||||||||||||||
Sbjct: 249 tacaccgagctcccgggccaccggttcgcggtcaccgccgacttcgccgc 298
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  238 bits (120), Expect = 1e-59
 Identities = 203/230 (88%), Gaps = 3/230 (1%)
 Strand = Plus / Plus

                                                                            
Query: 111      atggcgccgtccaagaaggtgctgatgctgtgcggcgactacatggaggactacgaggcg 170
                ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 21947650 atggcaccgtgcaagaaggtgctgatgctgtgcggcgactacatggaggactacgaggcc 21947709

                                                                            
Query: 171      gccgtgcccttctacgcgctggccggcctgggcgtcgccgtccactgcgccgcgccggg- 229
                |||||||| ||||||||||| ||||   | |||||||||||| |||||| ||||||||| 
Sbjct: 21947710 gccgtgccgttctacgcgctcgccgcgttcggcgtcgccgtcgactgcgtcgcgccgggg 21947769

                                                                            
Query: 230      --caaggcccccggcgacccctgccccaccgccgtgcacgacttcctcggctacgacctc 287
                   ||| ||||||||||| |||||| ||||||||| ||||| ||||||||| ||||||||
Sbjct: 21947770 aagaagccccccggcgacgcctgcctcaccgccgtccacgagttcctcggccacgacctc 21947829

                                                                  
Query: 288      tacacggagctccccggccaccgcttccgcgtcaccgccgacttcgccgc 337
                ||||| |||||||| |||||||| |||   ||||||||||||||||||||
Sbjct: 21947830 tacaccgagctcccgggccaccggttcgcggtcaccgccgacttcgccgc 21947879
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>gb|BT016784.1| Zea mays clone Contig617 mRNA sequence
          Length = 1616

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 45/47 (95%)
 Strand = Plus / Plus

                                                          
Query: 123 aagaaggtgctgatgctgtgcggcgactacatggaggactacgaggc 169
           ||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 134 aagaaggtgctcatgctctgcggcgactacatggaggactacgaggc 180
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>gb|AY104354.1| Zea mays PCO108571 mRNA sequence
          Length = 1633

 Score = 75.8 bits (38), Expect = 8e-11
 Identities = 44/46 (95%)
 Strand = Plus / Plus

                                                         
Query: 123 aagaaggtgctgatgctgtgcggcgactacatggaggactacgagg 168
           ||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 108 aagaaggtgctcatgctctgcggcgactacatggaggactacgagg 153
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>ref|XM_474305.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1164

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                            
Query: 121 ccaagaaggtgctgatgctgtgcggcgactacatggaggactacgaggc 169
           |||||||||||||  |||| ||||| |||||||||||||||||||||||
Sbjct: 8   ccaagaaggtgctcctgctctgcggagactacatggaggactacgaggc 56
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>dbj|AK100753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118M23, full
           insert sequence
          Length = 1368

 Score = 65.9 bits (33), Expect = 8e-08
 Identities = 45/49 (91%)
 Strand = Plus / Plus

                                                            
Query: 121 ccaagaaggtgctgatgctgtgcggcgactacatggaggactacgaggc 169
           |||||||||||||  |||| ||||| |||||||||||||||||||||||
Sbjct: 68  ccaagaaggtgctcctgctctgcggagactacatggaggactacgaggc 116
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>emb|AL606652.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004A17,
             complete sequence
          Length = 159894

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                             
Query: 121   ccaagaaggtgctgatgctgtgcggcgactacatggaggactacgagg 168
             |||||||||||||  |||| ||||| ||||||||||||||||||||||
Sbjct: 28989 ccaagaaggtgctcctgctctgcggagactacatggaggactacgagg 28942
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                                
Query: 121      ccaagaaggtgctgatgctgtgcggcgactacatggaggactacgagg 168
                |||||||||||||  |||| ||||| ||||||||||||||||||||||
Sbjct: 34304586 ccaagaaggtgctcctgctctgcggagactacatggaggactacgagg 34304539
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>gb|DQ351282.1| Oryza rufipogon unknown gene
          Length = 14907

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                             
Query: 121   ccaagaaggtgctgatgctgtgcggcgactacatggaggactacgagg 168
             |||||||||||||  |||| ||||| ||||||||||||||||||||||
Sbjct: 12168 ccaagaaggtgctcctgctctgcggagactacatggaggactacgagg 12121
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>emb|AL732356.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0624F09, complete
             sequence
          Length = 95419

 Score = 63.9 bits (32), Expect = 3e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                             
Query: 121   ccaagaaggtgctgatgctgtgcggcgactacatggaggactacgagg 168
             |||||||||||||  |||| ||||| ||||||||||||||||||||||
Sbjct: 76904 ccaagaaggtgctcctgctctgcggagactacatggaggactacgagg 76857
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 186     gcgctggccggcctgggcgtcgc 208
               |||||||||||||||||||||||
Sbjct: 2016476 gcgctggccggcctgggcgtcgc 2016498



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 185    cgcgctggccggcctgggcg 204
              ||||||||||||||||||||
Sbjct: 901953 cgcgctggccggcctgggcg 901972
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>ref|NM_111140.4| Arabidopsis thaliana hydrolase, acting on glycosyl bonds AT3G02720
           mRNA, complete cds
          Length = 1415

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 139 tgtgcggcgactacatggaggactacgagg 168
           ||||||| ||||||||||| ||||||||||
Sbjct: 102 tgtgcggtgactacatggaagactacgagg 131
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>gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC F13E7 genomic sequence,
             complete sequence
          Length = 100559

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 139   tgtgcggcgactacatggaggactacgagg 168
             ||||||| ||||||||||| ||||||||||
Sbjct: 99947 tgtgcggtgactacatggaagactacgagg 99918
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>gb|AC021640.7|ATAC021640 Arabidopsis thaliana chromosome III BAC F16B3 genomic sequence, complete
              sequence
          Length = 103904

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 139    tgtgcggcgactacatggaggactacgagg 168
              ||||||| ||||||||||| ||||||||||
Sbjct: 102005 tgtgcggtgactacatggaagactacgagg 102034
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>gb|BT000947.1| Arabidopsis thaliana clone C104919 unknown protein (At3g02720)
           mRNA, complete cds
          Length = 1198

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 139 tgtgcggcgactacatggaggactacgagg 168
           ||||||| ||||||||||| ||||||||||
Sbjct: 29  tgtgcggtgactacatggaagactacgagg 58
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>emb|X66502.1|CCMCPA C. crescentus mcpA gene
          Length = 3169

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 311  cttccgcgtcaccgccgacttc 332
            ||||||||||||||||||||||
Sbjct: 1883 cttccgcgtcaccgccgacttc 1904
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>gb|AE005716.1| Caulobacter crescentus CB15 section 42 of 359 of the complete genome
          Length = 10119

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 311  cttccgcgtcaccgccgacttc 332
            ||||||||||||||||||||||
Sbjct: 1128 cttccgcgtcaccgccgacttc 1149
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>emb|BX822658.1|CNS0A5YZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB56ZG12 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1427

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 139 tgtgcggcgactacatggaggactacgagg 168
           ||||||| ||||||||||| ||||||||||
Sbjct: 99  tgtgcggtgactacatggaagactacgagg 128
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>emb|BX824747.1|CNS0A5KB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH6ZD07 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1415

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 139 tgtgcggcgactacatggaggactacgagg 168
           ||||||| ||||||||||| ||||||||||
Sbjct: 82  tgtgcggtgactacatggaagactacgagg 111
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>emb|BX824730.1|CNS0A5RJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH68ZF02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1386

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 139 tgtgcggcgactacatggaggactacgagg 168
           ||||||| ||||||||||| ||||||||||
Sbjct: 102 tgtgcggtgactacatggaagactacgagg 131
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>emb|BX823263.1|CNS0A5CL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS18ZD04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1365

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 139 tgtgcggcgactacatggaggactacgagg 168
           ||||||| ||||||||||| ||||||||||
Sbjct: 54  tgtgcggtgactacatggaagactacgagg 83
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>emb|BX822838.1|CNS0A4PN Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB68ZA03 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1382

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 139 tgtgcggcgactacatggaggactacgagg 168
           ||||||| ||||||||||| ||||||||||
Sbjct: 84  tgtgcggtgactacatggaagactacgagg 113
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>emb|AL450306.14| Human DNA sequence from clone RP13-39P12 on chromosome 10 Contains a
             IMP (inosine monophosphate) dehydrogenase 2 (IMPDH2)
             pseudogene, a novel gene and  the 3' end of the DLG5 gene
             for discs large (Drosophila) homolog 5 (DLG5) (P-dlg,
             KIAA0583), complete sequence
          Length = 48537

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 233   ggcccccggcgacccctgccccacc 257
             ||||| |||||||||||||||||||
Sbjct: 47399 ggccctcggcgacccctgccccacc 47423
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>emb|AL391421.27| Human DNA sequence from clone RP11-126H7 on chromosome 10 Contains
           the 5' end of the DLG5 gene for discs large (Drosophila)
           homolog 5 (DLG5) (P-dlg, KIAA0583), a H2A histone family
           member Z (H2AFZ) pseudogene, a novel gene, the 3' end of
           the gene for polymerase (RNA) III (DNA directed) (155kD)
           (RPC155) and a CpG island, complete sequence
          Length = 168239

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 233 ggcccccggcgacccctgccccacc 257
           ||||| |||||||||||||||||||
Sbjct: 862 ggccctcggcgacccctgccccacc 886
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>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29
          Length = 303550

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 193    ccggcctgggcgtcgccgtcc 213
              |||||||||||||||||||||
Sbjct: 286064 ccggcctgggcgtcgccgtcc 286044
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>gb|AF352033.1| Homo sapiens DLG5 gene, exons 2 through 32 and complete cds
          Length = 82500

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 233   ggcccccggcgacccctgccccacc 257
             ||||| |||||||||||||||||||
Sbjct: 66334 ggccctcggcgacccctgccccacc 66310
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>gb|AE009594.1| Brucella melitensis 16M chromosome I, section 151 of 195 of the
            complete sequence
          Length = 10374

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 184  acgcgctggccggcctgggcg 204
            |||||||||||||||||||||
Sbjct: 2630 acgcgctggccggcctgggcg 2610
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>gb|AY899213.1| Streptomyces aizunensis strain NRRL B-11277 thioesterase,
            transcriptional regulator, response regulator, sensor
            kinase, and putative membrane proteins genes, complete
            cds
          Length = 8735

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 308  ccgcttccgcgtcaccgccga 328
            |||||||||||||||||||||
Sbjct: 7413 ccgcttccgcgtcaccgccga 7433
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>ref|XM_465447.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2059

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 253 ccaccgccgtgcacgacttcctcg 276
           ||||||||| ||||||||||||||
Sbjct: 554 ccaccgccgcgcacgacttcctcg 577
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>ref|XM_478448.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 4365

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  gcacgacttcctcggctacg 282
            ||||||||||||||||||||
Sbjct: 4260 gcacgacttcctcggctacg 4279
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>gb|AC010212.10| Drosophila melanogaster clone BACR32D05, complete sequence
          Length = 161579

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 54    gaccgatcctacgctggcac 73
             ||||||||||||||||||||
Sbjct: 79174 gaccgatcctacgctggcac 79155
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>ref|XM_001005865.1| PREDICTED: Mus musculus hypothetical protein 6430704N06
           (6430704N06), mRNA
          Length = 2816

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 acgcgctggccggcctgggc 203
           ||||||||||||||||||||
Sbjct: 620 acgcgctggccggcctgggc 639
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>ref|XM_905189.2| PREDICTED: Mus musculus hypothetical protein 6430704N06
           (6430704N06), mRNA
          Length = 2507

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 acgcgctggccggcctgggc 203
           ||||||||||||||||||||
Sbjct: 311 acgcgctggccggcctgggc 330
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>ref|XM_486328.4| PREDICTED: Mus musculus hypothetical protein 6430704N06 (6430704N06),
            mRNA
          Length = 5301

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 184  acgcgctggccggcctgggc 203
            ||||||||||||||||||||
Sbjct: 3105 acgcgctggccggcctgggc 3124
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>ref|XM_743168.1| Aspergillus fumigatus Af293 ABC multidrug transporter (Afu5g00790)
            partial mRNA
          Length = 4416

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 141  tgcggcgactacatggaggactac 164
            |||||||| |||||||||||||||
Sbjct: 4165 tgcggcgagtacatggaggactac 4188
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>gb|BT015262.1| Drosophila melanogaster LD40317 full insert cDNA
          Length = 4566

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 54   gaccgatcctacgctggcac 73
            ||||||||||||||||||||
Sbjct: 4128 gaccgatcctacgctggcac 4147
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>gb|AC166575.1| Mus musculus BAC clone RP23-99E16 from chromosome 17, complete sequence
          Length = 200353

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    gctggtccaagagcaatggc 115
             ||||||||||||||||||||
Sbjct: 90907 gctggtccaagagcaatggc 90888
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 302     cggccaccgcttccgcgtcaccgccgac 329
               |||| |||||||||||||| ||||||||
Sbjct: 1767629 cggcaaccgcttccgcgtcgccgccgac 1767602
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>gb|AC111086.18| Mus musculus chromosome 7, clone RP23-152P5, complete sequence
          Length = 186200

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 184   acgcgctggccggcctgggc 203
             ||||||||||||||||||||
Sbjct: 78919 acgcgctggccggcctgggc 78900
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>gb|AC166172.1| Mus musculus BAC clone RP23-106N22 from chromosome 17, complete
             sequence
          Length = 213656

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    gctggtccaagagcaatggc 115
             ||||||||||||||||||||
Sbjct: 30754 gctggtccaagagcaatggc 30735
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>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 188   gctggccggcctgggcgtcg 207
             ||||||||||||||||||||
Sbjct: 95246 gctggccggcctgggcgtcg 95227
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>emb|BX640431.1| Bordetella parapertussis strain 12822, complete genome; segment 9/14
          Length = 347894

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    gctggccggcctgggcgtcg 207
              ||||||||||||||||||||
Sbjct: 184894 gctggccggcctgggcgtcg 184913
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>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16
          Length = 345012

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 185    cgcgctggccggcctgggcgtcgccgtc 212
              |||||||||||||||| |||||| ||||
Sbjct: 160336 cgcgctggccggcctgtgcgtcggcgtc 160363
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 195    ggcctgggcgtcgccgtcca 214
              ||||||||||||||||||||
Sbjct: 738327 ggcctgggcgtcgccgtcca 738346
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>gb|AC159616.2| Mus musculus BAC clone RP24-497G20 from chromosome 12, complete
             sequence
          Length = 160836

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    cttcgtgctttgcttccctt 47
             ||||||||||||||||||||
Sbjct: 57651 cttcgtgctttgcttccctt 57670
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   cgcgctggccggcctgggcg 204
             ||||||||||||||||||||
Sbjct: 45420 cgcgctggccggcctgggcg 45401
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>ref|NM_141399.1| Drosophila melanogaster CG9727-RA (CG9727), mRNA
          Length = 4265

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 54   gaccgatcctacgctggcac 73
            ||||||||||||||||||||
Sbjct: 4151 gaccgatcctacgctggcac 4170
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>dbj|AK141001.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130095J21 product:hypothetical protein,
           full insert sequence
          Length = 3199

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 184 acgcgctggccggcctgggc 203
           ||||||||||||||||||||
Sbjct: 95  acgcgctggccggcctgggc 76
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>dbj|AK032609.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
           enriched library, clone:6430704N06 product:hypothetical
           Cysteine-rich flanking region, C-terminal containing
           protein, full insert sequence
          Length = 2112

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 184 acgcgctggccggcctgggc 203
           ||||||||||||||||||||
Sbjct: 148 acgcgctggccggcctgggc 167
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 263      gcacgacttcctcggctacg 282
                ||||||||||||||||||||
Sbjct: 20164814 gcacgacttcctcggctacg 20164833
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 253      ccaccgccgtgcacgacttcctcg 276
                ||||||||| ||||||||||||||
Sbjct: 15242768 ccaccgccgcgcacgacttcctcg 15242745
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 192     gccggcctgggcgtcgccgtccac 215
               |||||||||| |||||||||||||
Sbjct: 4021828 gccggcctggacgtcgccgtccac 4021851
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>dbj|AP003827.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1372_D12
          Length = 179898

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   gcacgacttcctcggctacg 282
             ||||||||||||||||||||
Sbjct: 67202 gcacgacttcctcggctacg 67221
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>gb|AE005075.1| Halobacterium sp. NRC-1 section 106 of 170 of the complete genome
          Length = 10850

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 313  tccgcgtcaccgccgacttcgccg 336
            |||||| |||||||||||||||||
Sbjct: 7194 tccgcgacaccgccgacttcgccg 7171
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>dbj|AP005608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0008C07
          Length = 146008

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 253    ccaccgccgtgcacgacttcctcg 276
              ||||||||| ||||||||||||||
Sbjct: 126543 ccaccgccgcgcacgacttcctcg 126520
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>dbj|AP005696.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0063K04
          Length = 158792

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 253   ccaccgccgtgcacgacttcctcg 276
             ||||||||| ||||||||||||||
Sbjct: 53889 ccaccgccgcgcacgacttcctcg 53866
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>dbj|AK119496.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-E02, full
           insert sequence
          Length = 2059

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 253 ccaccgccgtgcacgacttcctcg 276
           ||||||||| ||||||||||||||
Sbjct: 554 ccaccgccgcgcacgacttcctcg 577
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>dbj|AK105311.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-C08, full
            insert sequence
          Length = 1686

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 263  gcacgacttcctcggctacg 282
            ||||||||||||||||||||
Sbjct: 1390 gcacgacttcctcggctacg 1409
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 253    ccaccgccgtgcacgacttc 272
              ||||||||||||||||||||
Sbjct: 444054 ccaccgccgtgcacgacttc 444035
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>emb|AM055942.1| Toxoplasma gondii, strain RH, genomic DNA chromosome Ia
          Length = 1923819

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 267   gacttcctcggctacgacct 286
             ||||||||||||||||||||
Sbjct: 33911 gacttcctcggctacgacct 33892
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>gb|AE003675.4| Drosophila melanogaster chromosome 3R, section 9 of 118 of the complete
              sequence
          Length = 145958

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     gaccgatcctacgctggcac 73
              ||||||||||||||||||||
Sbjct: 117643 gaccgatcctacgctggcac 117624
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>emb|AJ535050.1|OSA535050 Oryza sativa (japonica cultivar-group) pdr5 gene for PDR-like ABC
             transporter, exons 1-19
          Length = 12922

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 263   gcacgacttcctcggctacg 282
             ||||||||||||||||||||
Sbjct: 12817 gcacgacttcctcggctacg 12836
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>emb|CR974582.5| Mouse DNA sequence from clone RP23-84L8 on chromosome 12, complete
           sequence
          Length = 165056

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 28  cttcgtgctttgcttccctt 47
           ||||||||||||||||||||
Sbjct: 503 cttcgtgctttgcttccctt 484
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>gb|AF509565.1| Streptomyces sp. JP95 griseorhodin biosynthesis gene cluster, complete
             sequence
          Length = 36905

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   acgcgctggccggcctgggc 203
             ||||||||||||||||||||
Sbjct: 21812 acgcgctggccggcctgggc 21831


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,210,138
Number of Sequences: 3902068
Number of extensions: 2210138
Number of successful extensions: 49903
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 48703
Number of HSP's gapped (non-prelim): 1195
length of query: 342
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 320
effective length of database: 17,147,199,772
effective search space: 5487103927040
effective search space used: 5487103927040
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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