ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet69b05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY857762.1| Triticum monococcum peroxidase 8 (POX8) mRNA, complete cds Length = 1282 Score = 345 bits (174), Expect = 5e-92 Identities = 192/198 (96%) Strand = Plus / Plus Query: 82 ccatggcgagcagcggcagcctggccggtctggcggtgctgctcaccgccgtgctgtgcc 141 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 63 ccatggcgagcagcggcgggctggccggtctggcggtgctgctcaccgccgtgctgtgcc 122 Query: 142 tgcagctgccggtccacagccgcgcccagctgcgcgtcgggttctacaacaccacctgcc 201 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 123 tgcagctgccggtccacagccgcgcgcagctgcgcgtggggttctacaacaccacctgcc 182 Query: 202 ccaacgccgaggccatcgtccggcaggccgtcaccgccgccttcgccaccaactccggcg 261 |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 183 ccaacgccgaggccatcgtccggcaggccgtcacggccgccttcgccaccaaccccggcg 242 Query: 262 tcgccgccggcctcatcc 279 |||||||||||||||||| Sbjct: 243 tcgccgccggcctcatcc 260
>ref|NM_183815.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1071 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 159 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 218 ||||||| |||||||| || |||||||||||||||| ||||||||| |||||| | | Sbjct: 73 agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgagacgctg 132 Query: 219 gtccggcaggccgtcaccgccgccttcgccaccaactccggcgtcgccgccggcctcatc 278 |||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||||| Sbjct: 133 gtccggcaggccgtcaccaacgccttcgccaacgactccggcatcgccgccggcctcatc 192 Query: 279 c 279 | Sbjct: 193 c 193
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 159 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 218 ||||||| |||||||| || |||||||||||||||| ||||||||| |||||| | | Sbjct: 12534345 agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgagacgctg 12534404 Query: 219 gtccggcaggccgtcaccgccgccttcgccaccaactccggcgtcgccgccggcctcatc 278 |||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||||| Sbjct: 12534405 gtccggcaggccgtcaccaacgccttcgccaacgactccggcatcgccgccggcctcatc 12534464 Query: 279 c 279 | Sbjct: 12534465 c 12534465 Score = 107 bits (54), Expect = 2e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 174 cgcgtcgggttctacaacaccacctgccccaacgccgaggccatcgtccggcaggccgtc 233 ||||||||||||||| | | || |||||||||||||||||| ||||||| ||||||||| Sbjct: 12482977 cgcgtcgggttctaccagagcagctgccccaacgccgaggcgctcgtccgccaggccgtc 12483036 Query: 234 accgccgccttcgccaccaactccggcgtcgccgccggcctcatcc 279 |||| |||||||||| || |||||||||||||||||||||||| Sbjct: 12483037 gccgcggccttcgccagggacgccggcgtcgccgccggcctcatcc 12483082 Score = 105 bits (53), Expect = 7e-20 Identities = 104/121 (85%) Strand = Plus / Plus Query: 159 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 218 ||||| || ||||||| || |||||||||||||| | |||||||| ||||||||| | Sbjct: 12547310 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 12547369 Query: 219 gtccggcaggccgtcaccgccgccttcgccaccaactccggcgtcgccgccggcctcatc 278 ||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||| Sbjct: 12547370 gtccggcaggccgtcgtggccgccgtcgccaacaactccggcctcgccgccggcctcatc 12547429 Query: 279 c 279 | Sbjct: 12547430 c 12547430 Score = 46.1 bits (23), Expect = 0.059 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 cggcgtcgccgccggcctcatcc 279 ||||||||||||||||||||||| Sbjct: 12492657 cggcgtcgccgccggcctcatcc 12492679 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Minus Query: 236 cgccgccttcgccaccaactccggc 260 |||||||||||||||| |||||||| Sbjct: 7739236 cgccgccttcgccaccgactccggc 7739212
>dbj|AP002971.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0537A05 Length = 152396 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 159 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 218 ||||||| |||||||| || |||||||||||||||| ||||||||| |||||| | | Sbjct: 45955 agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgagacgctg 46014 Query: 219 gtccggcaggccgtcaccgccgccttcgccaccaactccggcgtcgccgccggcctcatc 278 |||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||||| Sbjct: 46015 gtccggcaggccgtcaccaacgccttcgccaacgactccggcatcgccgccggcctcatc 46074 Query: 279 c 279 | Sbjct: 46075 c 46075 Score = 105 bits (53), Expect = 7e-20 Identities = 104/121 (85%) Strand = Plus / Plus Query: 159 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 218 ||||| || ||||||| || |||||||||||||| | |||||||| ||||||||| | Sbjct: 58920 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 58979 Query: 219 gtccggcaggccgtcaccgccgccttcgccaccaactccggcgtcgccgccggcctcatc 278 ||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||| Sbjct: 58980 gtccggcaggccgtcgtggccgccgtcgccaacaactccggcctcgccgccggcctcatc 59039 Query: 279 c 279 | Sbjct: 59040 c 59040 Score = 46.1 bits (23), Expect = 0.059 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 cggcgtcgccgccggcctcatcc 279 ||||||||||||||||||||||| Sbjct: 4267 cggcgtcgccgccggcctcatcc 4289
>dbj|AP004358.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1135C02 Length = 152306 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 159 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 218 ||||||| |||||||| || |||||||||||||||| ||||||||| |||||| | | Sbjct: 119960 agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgagacgctg 120019 Query: 219 gtccggcaggccgtcaccgccgccttcgccaccaactccggcgtcgccgccggcctcatc 278 |||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||||| Sbjct: 120020 gtccggcaggccgtcaccaacgccttcgccaacgactccggcatcgccgccggcctcatc 120079 Query: 279 c 279 | Sbjct: 120080 c 120080 Score = 107 bits (54), Expect = 2e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 174 cgcgtcgggttctacaacaccacctgccccaacgccgaggccatcgtccggcaggccgtc 233 ||||||||||||||| | | || |||||||||||||||||| ||||||| ||||||||| Sbjct: 68592 cgcgtcgggttctaccagagcagctgccccaacgccgaggcgctcgtccgccaggccgtc 68651 Query: 234 accgccgccttcgccaccaactccggcgtcgccgccggcctcatcc 279 |||| |||||||||| || |||||||||||||||||||||||| Sbjct: 68652 gccgcggccttcgccagggacgccggcgtcgccgccggcctcatcc 68697 Score = 105 bits (53), Expect = 7e-20 Identities = 104/121 (85%) Strand = Plus / Plus Query: 159 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 218 ||||| || ||||||| || |||||||||||||| | |||||||| ||||||||| | Sbjct: 132925 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 132984 Query: 219 gtccggcaggccgtcaccgccgccttcgccaccaactccggcgtcgccgccggcctcatc 278 ||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||| Sbjct: 132985 gtccggcaggccgtcgtggccgccgtcgccaacaactccggcctcgccgccggcctcatc 133044 Query: 279 c 279 | Sbjct: 133045 c 133045 Score = 46.1 bits (23), Expect = 0.059 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 cggcgtcgccgccggcctcatcc 279 ||||||||||||||||||||||| Sbjct: 78272 cggcgtcgccgccggcctcatcc 78294
>dbj|AK121616.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033044C11, full insert sequence Length = 5938 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 159 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 218 ||||||| |||||||| || |||||||||||||||| ||||||||| |||||| | | Sbjct: 135 agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgagacgctg 194 Query: 219 gtccggcaggccgtcaccgccgccttcgccaccaactccggcgtcgccgccggcctcatc 278 |||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||||| Sbjct: 195 gtccggcaggccgtcaccaacgccttcgccaacgactccggcatcgccgccggcctcatc 254 Query: 279 c 279 | Sbjct: 255 c 255
>tpe|BN000543.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx14 gene for class III peroxidase 14 precursor, exons 1-3 Length = 5620 Score = 121 bits (61), Expect = 1e-24 Identities = 106/121 (87%) Strand = Plus / Plus Query: 159 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 218 ||||||| |||||||| || |||||||||||||||| ||||||||| |||||| | | Sbjct: 73 agccgcggccagctgcaggtggggttctacaacaccagctgccccaatgccgagacgctg 132 Query: 219 gtccggcaggccgtcaccgccgccttcgccaccaactccggcgtcgccgccggcctcatc 278 |||||||||||||||||| ||||||||||| | |||||||| ||||||||||||||||| Sbjct: 133 gtccggcaggccgtcaccaacgccttcgccaacgactccggcatcgccgccggcctcatc 192 Query: 279 c 279 | Sbjct: 193 c 193
>ref|NM_183810.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1041 Score = 107 bits (54), Expect = 2e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 174 cgcgtcgggttctacaacaccacctgccccaacgccgaggccatcgtccggcaggccgtc 233 ||||||||||||||| | | || |||||||||||||||||| ||||||| ||||||||| Sbjct: 70 cgcgtcgggttctaccagagcagctgccccaacgccgaggcgctcgtccgccaggccgtc 129 Query: 234 accgccgccttcgccaccaactccggcgtcgccgccggcctcatcc 279 |||| |||||||||| || |||||||||||||||||||||||| Sbjct: 130 gccgcggccttcgccagggacgccggcgtcgccgccggcctcatcc 175
>dbj|AK068894.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001H23, full insert sequence Length = 1382 Score = 107 bits (54), Expect = 2e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 174 cgcgtcgggttctacaacaccacctgccccaacgccgaggccatcgtccggcaggccgtc 233 ||||||||||||||| | | || |||||||||||||||||| ||||||| ||||||||| Sbjct: 177 cgcgtcgggttctaccagagcagctgccccaacgccgaggcgctcgtccgccaggccgtc 236 Query: 234 accgccgccttcgccaccaactccggcgtcgccgccggcctcatcc 279 |||| |||||||||| || |||||||||||||||||||||||| Sbjct: 237 gccgcggccttcgccagggacgccggcgtcgccgccggcctcatcc 282
>tpe|BN000541.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx12 gene for class III peroxidase 12 precursor, exons 1-3 Length = 3928 Score = 107 bits (54), Expect = 2e-20 Identities = 93/106 (87%) Strand = Plus / Plus Query: 174 cgcgtcgggttctacaacaccacctgccccaacgccgaggccatcgtccggcaggccgtc 233 ||||||||||||||| | | || |||||||||||||||||| ||||||| ||||||||| Sbjct: 70 cgcgtcgggttctaccagagcagctgccccaacgccgaggcgctcgtccgccaggccgtc 129 Query: 234 accgccgccttcgccaccaactccggcgtcgccgccggcctcatcc 279 |||| |||||||||| || |||||||||||||||||||||||| Sbjct: 130 gccgcggccttcgccagggacgccggcgtcgccgccggcctcatcc 175
>ref|NM_183816.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1062 Score = 105 bits (53), Expect = 7e-20 Identities = 104/121 (85%) Strand = Plus / Plus Query: 159 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 218 ||||| || ||||||| || |||||||||||||| | |||||||| ||||||||| | Sbjct: 76 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 135 Query: 219 gtccggcaggccgtcaccgccgccttcgccaccaactccggcgtcgccgccggcctcatc 278 ||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||| Sbjct: 136 gtccggcaggccgtcgtggccgccgtcgccaacaactccggcctcgccgccggcctcatc 195 Query: 279 c 279 | Sbjct: 196 c 196
>emb|AJ401274.1|ZMA401274 Zea mays mRNA for peroxidase (pox1 gene) Length = 1398 Score = 105 bits (53), Expect = 7e-20 Identities = 86/97 (88%) Strand = Plus / Plus Query: 183 ttctacaacaccacctgccccaacgccgaggccatcgtccggcaggccgtcaccgccgcc 242 |||||| |||||| ||||||||||||||||||| ||||||| ||||||||| | |||||| Sbjct: 168 ttctacgacaccagctgccccaacgccgaggccctcgtccgccaggccgtcgcggccgcc 227 Query: 243 ttcgccaccaactccggcgtcgccgccggcctcatcc 279 ||||||| || ||||| |||||||||||||||||| Sbjct: 228 ttcgccaaggacgccggcatcgccgccggcctcatcc 264
>dbj|AK099187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107P11, full insert sequence Length = 1271 Score = 105 bits (53), Expect = 7e-20 Identities = 104/121 (85%) Strand = Plus / Plus Query: 159 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 218 ||||| || ||||||| || |||||||||||||| | |||||||| ||||||||| | Sbjct: 146 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 205 Query: 219 gtccggcaggccgtcaccgccgccttcgccaccaactccggcgtcgccgccggcctcatc 278 ||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||| Sbjct: 206 gtccggcaggccgtcgtggccgccgtcgccaacaactccggcctcgccgccggcctcatc 265 Query: 279 c 279 | Sbjct: 266 c 266
>dbj|AK070715.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023058L02, full insert sequence Length = 1492 Score = 105 bits (53), Expect = 7e-20 Identities = 104/121 (85%) Strand = Plus / Plus Query: 159 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 218 ||||| || ||||||| || |||||||||||||| | |||||||| ||||||||| | Sbjct: 151 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 210 Query: 219 gtccggcaggccgtcaccgccgccttcgccaccaactccggcgtcgccgccggcctcatc 278 ||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||| Sbjct: 211 gtccggcaggccgtcgtggccgccgtcgccaacaactccggcctcgccgccggcctcatc 270 Query: 279 c 279 | Sbjct: 271 c 271
>tpe|BN000544.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx15 gene for class III peroxidase 15 precursor, exons 1-3 Length = 5322 Score = 105 bits (53), Expect = 7e-20 Identities = 104/121 (85%) Strand = Plus / Plus Query: 159 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggccatc 218 ||||| || ||||||| || |||||||||||||| | |||||||| ||||||||| | Sbjct: 76 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggcgctg 135 Query: 219 gtccggcaggccgtcaccgccgccttcgccaccaactccggcgtcgccgccggcctcatc 278 ||||||||||||||| |||||| |||||| |||||||||| ||||||||||||||||| Sbjct: 136 gtccggcaggccgtcgtggccgccgtcgccaacaactccggcctcgccgccggcctcatc 195 Query: 279 c 279 | Sbjct: 196 c 196
>dbj|AK060115.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E07, full insert sequence Length = 1008 Score = 48.1 bits (24), Expect = 0.015 Identities = 48/56 (85%) Strand = Plus / Plus Query: 159 agccgcgcccagctgcgcgtcgggttctacaacaccacctgccccaacgccgaggc 214 ||||| || ||||||| || |||||||||||||| | |||||||| ||||||||| Sbjct: 149 agccgggcgcagctgcaggtggggttctacaacacgagctgccccaccgccgaggc 204
>ref|NM_183812.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 46.1 bits (23), Expect = 0.059 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 cggcgtcgccgccggcctcatcc 279 ||||||||||||||||||||||| Sbjct: 156 cggcgtcgccgccggcctcatcc 178
>gb|S80193.1| peroxidase isoform RP-2 or RP-4 [Oryza sativa L.=rice, Genomic, 89 nt] Length = 89 Score = 46.1 bits (23), Expect = 0.059 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 cggcgtcgccgccggcctcatcc 279 ||||||||||||||||||||||| Sbjct: 39 cggcgtcgccgccggcctcatcc 61
>dbj|AK067102.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095D16, full insert sequence Length = 1177 Score = 46.1 bits (23), Expect = 0.059 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 cggcgtcgccgccggcctcatcc 279 ||||||||||||||||||||||| Sbjct: 192 cggcgtcgccgccggcctcatcc 214
>tpe|BN000542.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx13 gene for class III peroxidase 13 precursor, exons 1-3 Length = 9315 Score = 46.1 bits (23), Expect = 0.059 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 cggcgtcgccgccggcctcatcc 279 ||||||||||||||||||||||| Sbjct: 156 cggcgtcgccgccggcctcatcc 178
>dbj|D10253.1|RICPORP24 Oryza sativa (japonica cultivar-group) genomic DNA encoding peroxidase component RP-2 and/or 4 Length = 89 Score = 46.1 bits (23), Expect = 0.059 Identities = 23/23 (100%) Strand = Plus / Plus Query: 257 cggcgtcgccgccggcctcatcc 279 ||||||||||||||||||||||| Sbjct: 39 cggcgtcgccgccggcctcatcc 61
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Plus Query: 239 cgccttcgccaccaactccggc 260 |||||||||||||||||||||| Sbjct: 2171596 cgccttcgccaccaactccggc 2171617
>dbj|AP005930.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0502B12 Length = 197160 Score = 44.1 bits (22), Expect = 0.23 Identities = 22/22 (100%) Strand = Plus / Minus Query: 242 cttcgccaccaactccggcgtc 263 |||||||||||||||||||||| Sbjct: 109477 cttcgccaccaactccggcgtc 109456
>ref|NM_188704.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3009 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Minus Query: 236 cgccgccttcgccaccaactccggc 260 |||||||||||||||| |||||||| Sbjct: 1005 cgccgccttcgccaccgactccggc 981
>ref|XM_475582.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1335 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 gccgtcaccgccgccttcgcc 248 ||||||||||||||||||||| Sbjct: 1034 gccgtcaccgccgccttcgcc 1014
>gb|BC056999.1| Mus musculus neuropathy target esterase, mRNA (cDNA clone MGC:66981 IMAGE:6831507), complete cds Length = 4461 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 tggcggtgctgctcaccgccgtgct 136 ||||||||||| ||||||||||||| Sbjct: 289 tggcggtgctggtcaccgccgtgct 313
>gb|BC054789.1| Mus musculus neuropathy target esterase, mRNA (cDNA clone MGC:65634 IMAGE:6831507), complete cds Length = 4461 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 tggcggtgctgctcaccgccgtgct 136 ||||||||||| ||||||||||||| Sbjct: 289 tggcggtgctggtcaccgccgtgct 313
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Minus Query: 228 gccgtcaccgccgccttcgcc 248 ||||||||||||||||||||| Sbjct: 121883 gccgtcaccgccgccttcgcc 121863
>dbj|AK162641.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830134O04 product:neuropathy target esterase, full insert sequence Length = 3840 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 tggcggtgctgctcaccgccgtgct 136 ||||||||||| ||||||||||||| Sbjct: 244 tggcggtgctggtcaccgccgtgct 268
>dbj|AK040720.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530020D05 product:neuropathy target esterase, full insert sequence Length = 2892 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 tggcggtgctgctcaccgccgtgct 136 ||||||||||| ||||||||||||| Sbjct: 325 tggcggtgctggtcaccgccgtgct 349
>dbj|AK089095.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430039F18 product:neuropathy target esterase, full insert sequence Length = 4265 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 tggcggtgctgctcaccgccgtgct 136 ||||||||||| ||||||||||||| Sbjct: 232 tggcggtgctggtcaccgccgtgct 256
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 gccgtcaccgccgccttcgcc 248 ||||||||||||||||||||| Sbjct: 2314988 gccgtcaccgccgccttcgcc 2315008 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccggcgtcgccgccggcctcatcc 279 ||||| |||||||||||||||||| Sbjct: 2013520 ccggcctcgccgccggcctcatcc 2013543
>dbj|AP003210.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0010K01 Length = 144404 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Minus Query: 236 cgccgccttcgccaccaactccggc 260 |||||||||||||||| |||||||| Sbjct: 41817 cgccgccttcgccaccgactccggc 41793
>dbj|AK122130.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133B05, full insert sequence Length = 3604 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Minus Query: 236 cgccgccttcgccaccaactccggc 260 |||||||||||||||| |||||||| Sbjct: 1164 cgccgccttcgccaccgactccggc 1140
>dbj|AK067723.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116J03, full insert sequence Length = 3671 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Minus Query: 236 cgccgccttcgccaccaactccggc 260 |||||||||||||||| |||||||| Sbjct: 1109 cgccgccttcgccaccgactccggc 1085
>gb|AF173829.1|AF173829 Mus musculus neuropathy target esterase homolog mRNA, complete cds Length = 4459 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 tggcggtgctgctcaccgccgtgct 136 ||||||||||| ||||||||||||| Sbjct: 271 tggcggtgctggtcaccgccgtgct 295
>ref|NM_015801.1| Mus musculus neuropathy target esterase (Nte), mRNA Length = 4459 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 tggcggtgctgctcaccgccgtgct 136 ||||||||||| ||||||||||||| Sbjct: 271 tggcggtgctggtcaccgccgtgct 295
>gb|AC170806.2| Mus musculus BAC clone RP24-363P6 from chromosome 8, complete sequence Length = 182564 Score = 42.1 bits (21), Expect = 0.92 Identities = 24/25 (96%) Strand = Plus / Plus Query: 112 tggcggtgctgctcaccgccgtgct 136 ||||||||||| ||||||||||||| Sbjct: 43546 tggcggtgctggtcaccgccgtgct 43570
>gb|AC105262.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1489_G03, complete sequence Length = 107870 Score = 42.1 bits (21), Expect = 0.92 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 gccgtcaccgccgccttcgcc 248 ||||||||||||||||||||| Sbjct: 42903 gccgtcaccgccgccttcgcc 42923
>ref|XM_476423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1377 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 ccaccaactccggcgtcgccgccg 270 ||||||||||||||| |||||||| Sbjct: 61 ccaccaactccggcgccgccgccg 38
>ref|NM_184589.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1020 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccggcgtcgccgccggcctcatcc 279 ||||||||| |||||||||||||| Sbjct: 206 ccggcgtcggcgccggcctcatcc 229
>ref|NM_184588.1| Oryza sativa (japonica cultivar-group), mRNA Length = 999 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccggcgtcgccgccggcctcatcc 279 ||||||||| |||||||||||||| Sbjct: 182 ccggcgtcggcgccggcctcatcc 205
>gb|AY611083.1| Melanohalea exasperata voucher MAF 7636 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 500 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 actccggcgtcgccgccggc 272 |||||||||||||||||||| Sbjct: 106 actccggcgtcgccgccggc 125
>gb|AC087552.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0519E07, complete sequence Length = 151399 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccggcgtcgccgccggcctcatcc 279 ||||| |||||||||||||||||| Sbjct: 106397 ccggcctcgccgccggcctcatcc 106420
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccggcgtcgccgccggcctcatcc 279 ||||||||| |||||||||||||| Sbjct: 14343228 ccggcgtcggcgccggcctcatcc 14343251 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccggcgtcgccgccggcctcatcc 279 ||||||||| |||||||||||||| Sbjct: 14333354 ccggcgtcggcgccggcctcatcc 14333377
>gb|AY816748.1| Synthetic construct clone pcNiV-Fopt C-terminal-Au1-tagged F protein gene, complete cds Length = 1659 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 187 acaacaccacctgccccaacgccg 210 |||||||||||||||||| ||||| Sbjct: 1238 acaacaccacctgccccaccgccg 1261
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 227 ggccgtcaccgccgccttcgccac 250 |||| ||||||||||||||||||| Sbjct: 3217994 ggccctcaccgccgccttcgccac 3218017
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccggcgtcgccgccggcctcatcc 279 ||||||||| |||||||||||||| Sbjct: 92457 ccggcgtcggcgccggcctcatcc 92480 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccggcgtcgccgccggcctcatcc 279 ||||||||| |||||||||||||| Sbjct: 82583 ccggcgtcggcgccggcctcatcc 82606
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 cctggccggtctggcggtgctgct 124 ||||||||||||||| |||||||| Sbjct: 952400 cctggccggtctggccgtgctgct 952377
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ccaccaactccggcgtcgccgccg 270 ||||||||||||||| |||||||| Sbjct: 1088150 ccaccaactccggcgccgccgccg 1088173
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccggcgtcgccgccggcctcatcc 279 ||||||||| |||||||||||||| Sbjct: 14338203 ccggcgtcggcgccggcctcatcc 14338226 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccggcgtcgccgccggcctcatcc 279 ||||||||| |||||||||||||| Sbjct: 14328329 ccggcgtcggcgccggcctcatcc 14328352
>gb|AC132936.9| Homo sapiens chromosome 11, clone RP13-569C6, complete sequence Length = 178778 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 133 tgctgtgcctgcagctgccggtcc 156 ||||||||||||||||||| |||| Sbjct: 65419 tgctgtgcctgcagctgcccgtcc 65442
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ccggcgtcgccgccggcctc 275 |||||||||||||||||||| Sbjct: 2220995 ccggcgtcgccgccggcctc 2221014
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 cgccgaggccatcgtccggcaggc 229 |||||||||||||| ||||||||| Sbjct: 4743057 cgccgaggccatcgaccggcaggc 4743034
>gb|AE005087.1| Halobacterium sp. NRC-1 section 118 of 170 of the complete genome Length = 10924 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 256 ccggcgtcgccgccggcctc 275 |||||||||||||||||||| Sbjct: 9187 ccggcgtcgccgccggcctc 9206
>dbj|AP006623.1| Homo sapiens genomic DNA, chromosome 11, clone:RP11-1391J07, complete sequence Length = 121103 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 133 tgctgtgcctgcagctgccggtcc 156 ||||||||||||||||||| |||| Sbjct: 54446 tgctgtgcctgcagctgcccgtcc 54423
>dbj|AK107254.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-G06, full insert sequence Length = 1377 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 247 ccaccaactccggcgtcgccgccg 270 ||||||||||||||| |||||||| Sbjct: 61 ccaccaactccggcgccgccgccg 38
>dbj|AK063587.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-A08, full insert sequence Length = 826 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccggcgtcgccgccggcctcatcc 279 ||||| |||||||||||||||||| Sbjct: 307 ccggcctcgccgccggcctcatcc 330
>dbj|AP004262.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0022B05 Length = 151317 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 247 ccaccaactccggcgtcgccgccg 270 ||||||||||||||| |||||||| Sbjct: 85738 ccaccaactccggcgccgccgccg 85761
>tpe|BN000599.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx70 gene for class III peroxidase 70 precursor, exons 1-2 Length = 1356 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccggcgtcgccgccggcctcatcc 279 ||||| |||||||||||||||||| Sbjct: 164 ccggcctcgccgccggcctcatcc 187
>tpe|BN000577.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx48 gene for class III peroxidase 48 precursor, exons 1-2 Length = 1136 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccggcgtcgccgccggcctcatcc 279 ||||||||| |||||||||||||| Sbjct: 206 ccggcgtcggcgccggcctcatcc 229
>tpe|BN000576.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx47 gene for class III peroxidase 47 precursor, exons 1-2 Length = 1376 Score = 40.1 bits (20), Expect = 3.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 ccggcgtcgccgccggcctcatcc 279 ||||||||| |||||||||||||| Sbjct: 182 ccggcgtcggcgccggcctcatcc 205
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 3.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 94 gcggcagcctggccggtctg 113 |||||||||||||||||||| Sbjct: 4650072 gcggcagcctggccggtctg 4650053 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,133,198 Number of Sequences: 3902068 Number of extensions: 2133198 Number of successful extensions: 118578 Number of sequences better than 10.0: 63 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117267 Number of HSP's gapped (non-prelim): 1311 length of query: 279 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 257 effective length of database: 17,147,199,772 effective search space: 4406830341404 effective search space used: 4406830341404 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
