| Clone Name | baet69a08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016439.1| Zea mays clone Contig272 mRNA sequence Length = 1566 Score = 272 bits (137), Expect = 5e-70 Identities = 224/253 (88%) Strand = Plus / Plus Query: 3 cagactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttacat 62 |||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 390 cagactatgctgacttctgttttaagacctacggcgatcgcgtaaagcactggtttacat 449 Query: 63 tcaatgaaccaaggatagttgcgcttcttggttacgacgtagggtcgaatcctcctcaaa 122 ||||||| ||||||||||| ||||| ||||| || ||| |||||| ||||||||||||| Sbjct: 450 tcaatgagccaaggatagtagcgctacttggctatgacacagggtcaaatcctcctcaaa 509 Query: 123 ggtgcagcaaatgcactgccggtgggaactcagcaacagaaccttacattgttgctcaca 182 |||||| || |||| |||| |||||||| |||||||| ||||||||||| |||||||| | Sbjct: 510 ggtgcaccagatgcgctgctggtgggaattcagcaaccgaaccttacatagttgctcata 569 Query: 183 attttctcttagcacacggttatgcagttgcaagataccggaccaagtatcaggcagctc 242 |||||||||| ||||| | | ||||||||||||||||||||| || |||||||| |||| Sbjct: 570 attttctcttggcacatgctactgcagttgcaagataccggacgaaatatcaggctgctc 629 Query: 243 agaaggggaaggt 255 ||||||| ||||| Sbjct: 630 agaagggtaaggt 642
>gb|AY109400.1| Zea mays CL1052_1 mRNA sequence Length = 2031 Score = 256 bits (129), Expect = 3e-65 Identities = 222/253 (87%) Strand = Plus / Plus Query: 3 cagactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttacat 62 |||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 387 cagactatgctgacttctgttttaagacctacggcgatcgcgtaaagcactggtttacat 446 Query: 63 tcaatgaaccaaggatagttgcgcttcttggttacgacgtagggtcgaatcctcctcaaa 122 ||||||| ||||||||||| ||||| ||||| || ||| |||||| ||||||||||||| Sbjct: 447 tcaatgagccaaggatagtagcgctacttggctatgacacagggtcaaatcctcctcaaa 506 Query: 123 ggtgcagcaaatgcactgccggtgggaactcagcaacagaaccttacattgttgctcaca 182 |||||| || ||| |||| |||||||| |||||||| |||||||| ||||||||||| | Sbjct: 507 ggtgcaccagatgtgctgctggtgggaattcagcaacggaaccttatattgttgctcata 566 Query: 183 attttctcttagcacacggttatgcagttgcaagataccggaccaagtatcaggcagctc 242 |||||||||| ||||| | | |||||||||||||||||| || || |||||||| |||| Sbjct: 567 attttctcttggcacatgctactgcagttgcaagataccgtacaaaatatcaggctgctc 626 Query: 243 agaaggggaaggt 255 ||||||| ||||| Sbjct: 627 agaagggtaaggt 639
>gb|BT009232.1| Triticum aestivum clone wle1n.pk0102.g9:fis, full insert mRNA sequence Length = 1023 Score = 252 bits (127), Expect = 5e-64 Identities = 148/155 (95%) Strand = Plus / Plus Query: 104 gggtcgaatcctcctcaaaggtgcagcaaatgcactgccggtgggaactcagcaacagaa 163 ||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||| Sbjct: 8 gggtcgaatcctcctcagaggtgcagcaaatgcgctgccggtggcaactcagcaacagag 67 Query: 164 ccttacattgttgctcacaattttctcttagcacacggttatgcagttgcaagataccgg 223 |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 68 ccttacatcgttgctcacaattttctcttagcacatggttatgcagttgcaagataccgg 127 Query: 224 accaagtatcaggcagctcagaaggggaaggttgg 258 || |||||||||||||||||||||||||||||||| Sbjct: 128 actaagtatcaggcagctcagaaggggaaggttgg 162
>ref|XM_469436.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1849 Score = 228 bits (115), Expect = 7e-57 Identities = 202/231 (87%) Strand = Plus / Plus Query: 14 gacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattcaatgaacca 73 ||||| ||||| |||||||||||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 648 gacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatgagcca 707 Query: 74 aggatagttgcgcttcttggttacgacgtagggtcgaatcctcctcaaaggtgcagcaaa 133 |||||||| || ||||||||||| ||| ||| | ||||||||| ||||||||| ||| Sbjct: 708 aggatagtagcacttcttggttatgaccaaggaacaaatcctcctaaaaggtgcacaaaa 767 Query: 134 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 193 ||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 768 tgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctta 827 Query: 194 gcacacggttatgcagttgcaagataccggaccaagtatcaggcagctcag 244 |||| | | || ||||||||||||||||| |||||||||||||||||| Sbjct: 828 tcacatgctgcagctgttgcaagataccggactaagtatcaggcagctcag 878
>gb|U28047.2|OSU28047 Oryza sativa beta-glucosidase mRNA, complete cds Length = 1909 Score = 228 bits (115), Expect = 7e-57 Identities = 202/231 (87%) Strand = Plus / Plus Query: 14 gacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattcaatgaacca 73 ||||| ||||| |||||||||||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 659 gacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatgagcca 718 Query: 74 aggatagttgcgcttcttggttacgacgtagggtcgaatcctcctcaaaggtgcagcaaa 133 |||||||| || ||||||||||| ||| ||| | ||||||||| ||||||||| ||| Sbjct: 719 aggatagtagcacttcttggttatgaccaaggaacaaatcctcctaaaaggtgcacaaaa 778 Query: 134 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 193 ||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 779 tgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctta 838 Query: 194 gcacacggttatgcagttgcaagataccggaccaagtatcaggcagctcag 244 |||| | | || ||||||||||||||||| |||||||||||||||||| Sbjct: 839 tcacatgctgcagctgttgcaagataccggactaagtatcaggcagctcag 889
>dbj|AK105026.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-H02, full insert sequence Length = 1846 Score = 228 bits (115), Expect = 7e-57 Identities = 202/231 (87%) Strand = Plus / Plus Query: 14 gacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattcaatgaacca 73 ||||| ||||| |||||||||||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 651 gacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatgagcca 710 Query: 74 aggatagttgcgcttcttggttacgacgtagggtcgaatcctcctcaaaggtgcagcaaa 133 |||||||| || ||||||||||| ||| ||| | ||||||||| ||||||||| ||| Sbjct: 711 aggatagtagcacttcttggttatgaccaaggaacaaatcctcctaaaaggtgcacaaaa 770 Query: 134 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 193 ||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 771 tgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctta 830 Query: 194 gcacacggttatgcagttgcaagataccggaccaagtatcaggcagctcag 244 |||| | | || ||||||||||||||||| |||||||||||||||||| Sbjct: 831 tcacatgctgcagctgttgcaagataccggactaagtatcaggcagctcag 881
>dbj|AK103027.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117C01, full insert sequence Length = 1857 Score = 228 bits (115), Expect = 7e-57 Identities = 202/231 (87%) Strand = Plus / Plus Query: 14 gacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattcaatgaacca 73 ||||| ||||| |||||||||||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 650 gacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatgagcca 709 Query: 74 aggatagttgcgcttcttggttacgacgtagggtcgaatcctcctcaaaggtgcagcaaa 133 |||||||| || ||||||||||| ||| ||| | ||||||||| ||||||||| ||| Sbjct: 710 aggatagtagcacttcttggttatgaccaaggaacaaatcctcctaaaaggtgcacaaaa 769 Query: 134 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 193 ||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 770 tgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctta 829 Query: 194 gcacacggttatgcagttgcaagataccggaccaagtatcaggcagctcag 244 |||| | | || ||||||||||||||||| |||||||||||||||||| Sbjct: 830 tcacatgctgcagctgttgcaagataccggactaagtatcaggcagctcag 880
>dbj|AK100165.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023021K07, full insert sequence Length = 1894 Score = 228 bits (115), Expect = 7e-57 Identities = 202/231 (87%) Strand = Plus / Plus Query: 14 gacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattcaatgaacca 73 ||||| ||||| |||||||||||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 654 gacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatgagcca 713 Query: 74 aggatagttgcgcttcttggttacgacgtagggtcgaatcctcctcaaaggtgcagcaaa 133 |||||||| || ||||||||||| ||| ||| | ||||||||| ||||||||| ||| Sbjct: 714 aggatagtagcacttcttggttatgaccaaggaacaaatcctcctaaaaggtgcacaaaa 773 Query: 134 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 193 ||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 774 tgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctta 833 Query: 194 gcacacggttatgcagttgcaagataccggaccaagtatcaggcagctcag 244 |||| | | || ||||||||||||||||| |||||||||||||||||| Sbjct: 834 tcacatgctgcagctgttgcaagataccggactaagtatcaggcagctcag 884
>dbj|AK059920.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-209-G08, full insert sequence Length = 1302 Score = 228 bits (115), Expect = 7e-57 Identities = 202/231 (87%) Strand = Plus / Plus Query: 14 gacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattcaatgaacca 73 ||||| ||||| |||||||||||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 95 gacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatgagcca 154 Query: 74 aggatagttgcgcttcttggttacgacgtagggtcgaatcctcctcaaaggtgcagcaaa 133 |||||||| || ||||||||||| ||| ||| | ||||||||| ||||||||| ||| Sbjct: 155 aggatagtagcacttcttggttatgaccaaggaacaaatcctcctaaaaggtgcacaaaa 214 Query: 134 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 193 ||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 215 tgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctta 274 Query: 194 gcacacggttatgcagttgcaagataccggaccaagtatcaggcagctcag 244 |||| | | || ||||||||||||||||| |||||||||||||||||| Sbjct: 275 tcacatgctgcagctgttgcaagataccggactaagtatcaggcagctcag 325
>gb|AC091670.7| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1212_C08 map R2847, complete sequence Length = 100918 Score = 212 bits (107), Expect = 4e-52 Identities = 194/223 (86%) Strand = Plus / Minus Query: 14 gacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattcaatgaacca 73 ||||| ||||| |||||||||||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 83139 gacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatgagcca 83080 Query: 74 aggatagttgcgcttcttggttacgacgtagggtcgaatcctcctcaaaggtgcagcaaa 133 |||||||| || ||||||||||| ||| ||| | ||||||||| ||||||||| ||| Sbjct: 83079 aggatagtagcacttcttggttatgaccaaggaacaaatcctcctaaaaggtgcacaaaa 83020 Query: 134 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 193 ||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 83019 tgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctta 82960 Query: 194 gcacacggttatgcagttgcaagataccggaccaagtatcagg 236 |||| | | || ||||||||||||||||| |||||||||| Sbjct: 82959 tcacatgctgcagctgttgcaagataccggactaagtatcagg 82917 Score = 73.8 bits (37), Expect = 2e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 5 gactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattc 64 ||||||||||| |||||||| ||||| | ||||||||| || ||| |||||||||| || Sbjct: 92391 gactatgctgagttttgtttcaagacatatggcgatcgagtcaagaactggtttacgttt 92332 Query: 65 aatgaaccaaggatagt 81 ||||| ||||||||||| Sbjct: 92331 aatgagccaaggatagt 92315 Score = 61.9 bits (31), Expect = 9e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 138 ctgccggtgggaactcagcaacagaaccttacattgttgctca 180 ||||||||||||||||||||||||| || || ||||||||||| Sbjct: 92258 ctgccggtgggaactcagcaacagagccatatattgttgctca 92216
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 212 bits (107), Expect = 4e-52 Identities = 194/223 (86%) Strand = Plus / Minus Query: 14 gacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattcaatgaacca 73 ||||| ||||| |||||||||||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 27947411 gacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatgagcca 27947352 Query: 74 aggatagttgcgcttcttggttacgacgtagggtcgaatcctcctcaaaggtgcagcaaa 133 |||||||| || ||||||||||| ||| ||| | ||||||||| ||||||||| ||| Sbjct: 27947351 aggatagtagcacttcttggttatgaccaaggaacaaatcctcctaaaaggtgcacaaaa 27947292 Query: 134 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 193 ||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 27947291 tgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctta 27947232 Query: 194 gcacacggttatgcagttgcaagataccggaccaagtatcagg 236 |||| | | || ||||||||||||||||| |||||||||| Sbjct: 27947231 tcacatgctgcagctgttgcaagataccggactaagtatcagg 27947189 Score = 73.8 bits (37), Expect = 2e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 5 gactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattc 64 ||||||||||| |||||||| ||||| | ||||||||| || ||| |||||||||| || Sbjct: 27956663 gactatgctgagttttgtttcaagacatatggcgatcgagtcaagaactggtttacgttt 27956604 Query: 65 aatgaaccaaggatagt 81 ||||| ||||||||||| Sbjct: 27956603 aatgagccaaggatagt 27956587 Score = 61.9 bits (31), Expect = 9e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 138 ctgccggtgggaactcagcaacagaaccttacattgttgctca 180 ||||||||||||||||||||||||| || || ||||||||||| Sbjct: 27956530 ctgccggtgggaactcagcaacagagccatatattgttgctca 27956488
>gb|AC133334.8| Oryza sativa chromosome 3 BAC OSJNBa0004L11 genomic sequence, complete sequence Length = 133889 Score = 212 bits (107), Expect = 4e-52 Identities = 194/223 (86%) Strand = Plus / Plus Query: 14 gacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattcaatgaacca 73 ||||| ||||| |||||||||||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 77615 gacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatgagcca 77674 Query: 74 aggatagttgcgcttcttggttacgacgtagggtcgaatcctcctcaaaggtgcagcaaa 133 |||||||| || ||||||||||| ||| ||| | ||||||||| ||||||||| ||| Sbjct: 77675 aggatagtagcacttcttggttatgaccaaggaacaaatcctcctaaaaggtgcacaaaa 77734 Query: 134 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 193 ||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 77735 tgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctta 77794 Query: 194 gcacacggttatgcagttgcaagataccggaccaagtatcagg 236 |||| | | || ||||||||||||||||| |||||||||| Sbjct: 77795 tcacatgctgcagctgttgcaagataccggactaagtatcagg 77837 Score = 73.8 bits (37), Expect = 2e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 5 gactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattc 64 ||||||||||| |||||||| ||||| | ||||||||| || ||| |||||||||| || Sbjct: 68363 gactatgctgagttttgtttcaagacatatggcgatcgagtcaagaactggtttacgttt 68422 Query: 65 aatgaaccaaggatagt 81 ||||| ||||||||||| Sbjct: 68423 aatgagccaaggatagt 68439 Score = 61.9 bits (31), Expect = 9e-07 Identities = 40/43 (93%) Strand = Plus / Plus Query: 138 ctgccggtgggaactcagcaacagaaccttacattgttgctca 180 ||||||||||||||||||||||||| || || ||||||||||| Sbjct: 68496 ctgccggtgggaactcagcaacagagccatatattgttgctca 68538
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 212 bits (107), Expect = 4e-52 Identities = 194/223 (86%) Strand = Plus / Minus Query: 14 gacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattcaatgaacca 73 ||||| ||||| |||||||||||| ||||||| ||||||||||||||||| ||||| ||| Sbjct: 28038735 gacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatgagcca 28038676 Query: 74 aggatagttgcgcttcttggttacgacgtagggtcgaatcctcctcaaaggtgcagcaaa 133 |||||||| || ||||||||||| ||| ||| | ||||||||| ||||||||| ||| Sbjct: 28038675 aggatagtagcacttcttggttatgaccaaggaacaaatcctcctaaaaggtgcacaaaa 28038616 Query: 134 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 193 ||| |||| ||||||||||||||||||||||| |||||||||||||| |||||||||||| Sbjct: 28038615 tgcgctgctggtgggaactcagcaacagaaccatacattgttgctcataattttctctta 28038556 Query: 194 gcacacggttatgcagttgcaagataccggaccaagtatcagg 236 |||| | | || ||||||||||||||||| |||||||||| Sbjct: 28038555 tcacatgctgcagctgttgcaagataccggactaagtatcagg 28038513 Score = 73.8 bits (37), Expect = 2e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 5 gactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattc 64 ||||||||||| |||||||| ||||| | ||||||||| || ||| |||||||||| || Sbjct: 28047987 gactatgctgagttttgtttcaagacatatggcgatcgagtcaagaactggtttacgttt 28047928 Query: 65 aatgaaccaaggatagt 81 ||||| ||||||||||| Sbjct: 28047927 aatgagccaaggatagt 28047911 Score = 61.9 bits (31), Expect = 9e-07 Identities = 40/43 (93%) Strand = Plus / Minus Query: 138 ctgccggtgggaactcagcaacagaaccttacattgttgctca 180 ||||||||||||||||||||||||| || || ||||||||||| Sbjct: 28047854 ctgccggtgggaactcagcaacagagccatatattgttgctca 28047812
>ref|XM_469438.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2080 Score = 73.8 bits (37), Expect = 2e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 5 gactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattc 64 ||||||||||| |||||||| ||||| | ||||||||| || ||| |||||||||| || Sbjct: 654 gactatgctgagttttgtttcaagacatatggcgatcgagtcaagaactggtttacgttt 713 Query: 65 aatgaaccaaggatagt 81 ||||| ||||||||||| Sbjct: 714 aatgagccaaggatagt 730 Score = 61.9 bits (31), Expect = 9e-07 Identities = 40/43 (93%) Strand = Plus / Plus Query: 138 ctgccggtgggaactcagcaacagaaccttacattgttgctca 180 ||||||||||||||||||||||||| || || ||||||||||| Sbjct: 787 ctgccggtgggaactcagcaacagagccatatattgttgctca 829
>dbj|AK120790.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011K21, full insert sequence Length = 2082 Score = 73.8 bits (37), Expect = 2e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 5 gactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattc 64 ||||||||||| |||||||| ||||| | ||||||||| || ||| |||||||||| || Sbjct: 656 gactatgctgagttttgtttcaagacatatggcgatcgagtcaagaactggtttacgttt 715 Query: 65 aatgaaccaaggatagt 81 ||||| ||||||||||| Sbjct: 716 aatgagccaaggatagt 732 Score = 61.9 bits (31), Expect = 9e-07 Identities = 40/43 (93%) Strand = Plus / Plus Query: 138 ctgccggtgggaactcagcaacagaaccttacattgttgctca 180 ||||||||||||||||||||||||| || || ||||||||||| Sbjct: 789 ctgccggtgggaactcagcaacagagccatatattgttgctca 831
>dbj|AK105850.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-G08, full insert sequence Length = 1387 Score = 73.8 bits (37), Expect = 2e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 5 gactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattc 64 ||||||||||| |||||||| ||||| | ||||||||| || ||| |||||||||| || Sbjct: 39 gactatgctgagttttgtttcaagacatatggcgatcgagtcaagaactggtttacgttt 98 Query: 65 aatgaaccaaggatagt 81 ||||| ||||||||||| Sbjct: 99 aatgagccaaggatagt 115 Score = 61.9 bits (31), Expect = 9e-07 Identities = 40/43 (93%) Strand = Plus / Plus Query: 138 ctgccggtgggaactcagcaacagaaccttacattgttgctca 180 ||||||||||||||||||||||||| || || ||||||||||| Sbjct: 172 ctgccggtgggaactcagcaacagagccatatattgttgctca 214
>ref|XM_469437.1| Oryza sativa (japonica cultivar-group), mRNA Length = 806 Score = 69.9 bits (35), Expect = 4e-09 Identities = 50/55 (90%) Strand = Plus / Plus Query: 14 gacttttgttttaagacctttggcgatcgtgtaaagcactggtttacattcaatg 68 ||||| ||||| |||||||||||| ||||||| ||||||||||||||||| |||| Sbjct: 752 gacttctgtttcaagacctttggcaatcgtgtcaagcactggtttacatttaatg 806
>gb|AC146567.10| Medicago truncatula clone mth2-99p24, complete sequence Length = 141672 Score = 61.9 bits (31), Expect = 9e-07 Identities = 37/39 (94%) Strand = Plus / Plus Query: 146 gggaactcagcaacagaaccttacattgttgctcacaat 184 ||||||||||| || |||||||||||||||||||||||| Sbjct: 135726 gggaactcagctactgaaccttacattgttgctcacaat 135764
>dbj|AK059517.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C01, full insert sequence Length = 1336 Score = 61.9 bits (31), Expect = 9e-07 Identities = 40/43 (93%) Strand = Plus / Plus Query: 138 ctgccggtgggaactcagcaacagaaccttacattgttgctca 180 ||||||||||||||||||||||||| || || ||||||||||| Sbjct: 43 ctgccggtgggaactcagcaacagagccatatattgttgctca 85
>gb|DQ289594.1| Oncidium Gower Ramsey beta-mannosidase 2 mRNA, complete cds Length = 1669 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 134 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaattttctctta 193 |||||||| ||||| ||||| | |||||||||||||||||||| |||||| || ||||| Sbjct: 678 tgcactgcaggtggcaactcgactacagaaccttacattgttgcccacaatcttatctta 737 Score = 54.0 bits (27), Expect = 2e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 2 gcagactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttaca 61 ||||| ||||| || ||||||||||| || ||||| || | || ||| ||||||||||| Sbjct: 546 gcagattatgcagaattttgttttaaaacatttggagacagggtgaagaactggtttaca 605 Query: 62 ttcaatgaaccaagg 76 || |||||||||||| Sbjct: 606 tttaatgaaccaagg 620
>gb|DQ289595.1| Oncidium Gower Ramsey beta-mannosidase 1 mRNA, complete cds Length = 1700 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 134 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaat 184 |||||||| ||||| ||||| | |||||||||||||||||||| |||||| Sbjct: 709 tgcactgctggtggcaactctactacagaaccttacattgttgcccacaat 759 Score = 54.0 bits (27), Expect = 2e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 2 gcagactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttaca 61 ||||| ||||| || ||||||||||| || ||||| || | || ||| ||||||||||| Sbjct: 577 gcagattatgcagaattttgttttaaaacatttggagacagggtgaagaactggtttaca 636 Query: 62 ttcaatgaaccaagg 76 || |||||||||||| Sbjct: 637 tttaatgaaccaagg 651
>gb|DQ289593.1| Oncidium Gower Ramsey beta-mannosidase 3 mRNA, complete cds Length = 1639 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 134 tgcactgccggtgggaactcagcaacagaaccttacattgttgctcacaat 184 |||||||| ||||| ||||| | |||||||||||||||||||| |||||| Sbjct: 648 tgcactgctggtggcaactctactacagaaccttacattgttgcccacaat 698 Score = 54.0 bits (27), Expect = 2e-04 Identities = 63/75 (84%) Strand = Plus / Plus Query: 2 gcagactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactggtttaca 61 ||||| ||||| || ||||||||||| || ||||| || | || ||| ||||||||||| Sbjct: 516 gcagattatgcagaattttgttttaaaacatttggagacagggtgaagaactggtttaca 575 Query: 62 ttcaatgaaccaagg 76 || |||||||||||| Sbjct: 576 tttaatgaaccaagg 590
>gb|U26025.2| Prunus serotina amygdalin hydrolase isoform AH I precursor (AH1) mRNA, complete cds Length = 1915 Score = 48.1 bits (24), Expect = 0.014 Identities = 45/52 (86%) Strand = Plus / Plus Query: 4 agactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactgg 55 ||||||||| || |||||||||||| ||||||||||| ||||| |||||| Sbjct: 590 agactatgcaaacctttgttttaagaaatttggcgatcgagtaaaacactgg 641
>gb|AF414606.1|AF414606 Prunus serotina amygdalin hydrolase isoform AH I precursor (AH1) gene, partial cds Length = 3373 Score = 48.1 bits (24), Expect = 0.014 Identities = 45/52 (86%) Strand = Plus / Plus Query: 4 agactatgctgacttttgttttaagacctttggcgatcgtgtaaagcactgg 55 ||||||||| || |||||||||||| ||||||||||| ||||| |||||| Sbjct: 1577 agactatgcaaacctttgttttaagaaatttggcgatcgagtaaaacactgg 1628
>gb|AC161809.3| Mus musculus chromosome 1, clone RP23-114N13, complete sequence Length = 213778 Score = 44.1 bits (22), Expect = 0.22 Identities = 28/30 (93%) Strand = Plus / Plus Query: 7 ctatgctgacttttgttttaagacctttgg 36 |||||| ||||| ||||||||||||||||| Sbjct: 32631 ctatgcggacttctgttttaagacctttgg 32660
>ref|XM_975593.1| PREDICTED: Mus musculus lactase (Lct), mRNA Length = 6166 Score = 44.1 bits (22), Expect = 0.22 Identities = 28/30 (93%) Strand = Plus / Plus Query: 7 ctatgctgacttttgttttaagacctttgg 36 |||||| ||||| ||||||||||||||||| Sbjct: 3156 ctatgcggacttctgttttaagacctttgg 3185
>ref|XM_914093.2| PREDICTED: Mus musculus lactase (Lct), mRNA Length = 6166 Score = 44.1 bits (22), Expect = 0.22 Identities = 28/30 (93%) Strand = Plus / Plus Query: 7 ctatgctgacttttgttttaagacctttgg 36 |||||| ||||| ||||||||||||||||| Sbjct: 3156 ctatgcggacttctgttttaagacctttgg 3185
>ref|XM_129479.6| PREDICTED: Mus musculus lactase (Lct), mRNA Length = 6166 Score = 44.1 bits (22), Expect = 0.22 Identities = 28/30 (93%) Strand = Plus / Plus Query: 7 ctatgctgacttttgttttaagacctttgg 36 |||||| ||||| ||||||||||||||||| Sbjct: 3156 ctatgcggacttctgttttaagacctttgg 3185
>gb|AC124495.2| Mus musculus BAC clone RP23-468F5 from chromosome 1, complete sequence Length = 182578 Score = 44.1 bits (22), Expect = 0.22 Identities = 28/30 (93%) Strand = Plus / Minus Query: 7 ctatgctgacttttgttttaagacctttgg 36 |||||| ||||| ||||||||||||||||| Sbjct: 68194 ctatgcggacttctgttttaagacctttgg 68165
>dbj|AK158042.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched library, clone:F930020G04 product:Rat lactase-phlorizin hydrolase (Fragment) homolog [Rattus norvegicus], full insert sequence Length = 3660 Score = 44.1 bits (22), Expect = 0.22 Identities = 28/30 (93%) Strand = Plus / Plus Query: 7 ctatgctgacttttgttttaagacctttgg 36 |||||| ||||| ||||||||||||||||| Sbjct: 1258 ctatgcggacttctgttttaagacctttgg 1287
>gb|AC092615.3| Homo sapiens BAC clone RP11-204D19 from 2, complete sequence Length = 180346 Score = 42.1 bits (21), Expect = 0.85 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 gctgacttttgttttaagacc 31 ||||||||||||||||||||| Sbjct: 103121 gctgacttttgttttaagacc 103101
>gb|U95298.1|MEU95298 Manihot esculenta linamarase (pLIN-GEN) gene, complete cds Length = 2782 Score = 42.1 bits (21), Expect = 0.85 Identities = 33/37 (89%) Strand = Plus / Plus Query: 150 actcagcaacagaaccttacattgttgctcacaattt 186 ||||||| |||||||||||||| ||||| || ||||| Sbjct: 1281 actcagctacagaaccttacatagttgcccataattt 1317
>emb|AL392086.14| Human DNA sequence from clone RP11-799O21 on chromosome 10 Contains the 3' end of a novel gene and a novel gene, complete sequence Length = 220225 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 ctggtttacattcaatgaac 71 |||||||||||||||||||| Sbjct: 27697 ctggtttacattcaatgaac 27678
>gb|AC154328.2| Mus musculus BAC clone RP23-298N23 from chromosome 13, complete sequence Length = 182025 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 acttttgttttaagaccttt 34 |||||||||||||||||||| Sbjct: 147237 acttttgttttaagaccttt 147256
>gb|AC109604.8| Mus musculus strain 129Sv/CJ7 clone rp22-298k22, complete sequence Length = 139770 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 acttttgttttaagaccttt 34 |||||||||||||||||||| Sbjct: 41202 acttttgttttaagaccttt 41183
>ref|XM_686254.1| PREDICTED: Danio rerio similar to LOC407679 protein (LOC562885), mRNA Length = 4161 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 accaagtatcaggcagctcagaag 247 |||||||| ||||||||||||||| Sbjct: 1567 accaagtaccaggcagctcagaag 1590
>emb|BX649325.3| Zebrafish DNA sequence from clone DKEY-81F9 in linkage group 24, complete sequence Length = 169135 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 accaagtatcaggcagctcagaag 247 |||||||| ||||||||||||||| Sbjct: 26099 accaagtaccaggcagctcagaag 26122
>gb|AC153866.6| Mus musculus 10 BAC RP23-350O24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184984 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 acttttgttttaagaccttt 34 |||||||||||||||||||| Sbjct: 150197 acttttgttttaagaccttt 150216 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,226,992 Number of Sequences: 3902068 Number of extensions: 2226992 Number of successful extensions: 41367 Number of sequences better than 10.0: 38 Number of HSP's better than 10.0 without gapping: 38 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 41283 Number of HSP's gapped (non-prelim): 74 length of query: 260 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 238 effective length of database: 17,147,199,772 effective search space: 4081033545736 effective search space used: 4081033545736 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)