ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet68g10 |
|---|---|
| Clone Library Name | barley_pub |
>DAL81_YEAST (P21657) Transcriptional activator protein DAL81 (Regulatory| protein UGA35) Length = 970 Score = 33.5 bits (75), Expect = 0.23 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = -3 Query: 269 ANHHTLGYKQSHTSLLQEQAGEHPVDVSL*KE*QMLGVLLGSISEQHPEQ*HQIGATDQQ 90 +NH L + ++T++LQ A +HP +L GS +QH +Q Q QQ Sbjct: 40 SNHDILNFNDNYTTILQHLANDHP---------NILREKGGSQQQQHQQQQQQQQQQQQQ 90 Query: 89 QLKQ 78 Q +Q Sbjct: 91 QQQQ 94
>GLPB_YERPE (Q8ZAH6) Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC| 1.1.99.5) (Anaerobic G-3-P dehydrogenase subunit B) (Anaerobic G3Pdhase B) Length = 424 Score = 32.3 bits (72), Expect = 0.51 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 2/54 (3%) Frame = -2 Query: 399 VGTSDSNDIRKSP-GGIKPTFLA*AD-PLAPVELSPEPWFVVKLPGKPSYVRIQ 244 VG+S N +R +P G +PT+L+ AD P+AP+ P PW V + G ++ Q Sbjct: 104 VGSSAENHLRLTPLGSCRPTWLSLADIPVAPLN-GPLPWQRVAVIGIEGFLDFQ 156
>GUAA_BLOFL (Q7VRS2) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 526 Score = 30.0 bits (66), Expect = 2.5 Identities = 9/27 (33%), Positives = 20/27 (74%) Frame = +3 Query: 333 RQGKLVLFRLAISLCHCYQTYRPMHLI 413 ++GK +L R A+ +C C T++P++++ Sbjct: 189 KKGKDILKRFAVDICRCEVTWKPVYIV 215
>RPIA_RHOPA (Q6N8C3) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 232 Score = 29.3 bits (64), Expect = 4.3 Identities = 23/75 (30%), Positives = 31/75 (41%), Gaps = 2/75 (2%) Frame = +2 Query: 194 PQDVLPPALGATMYAIACILTYDGLPGNLTTNHGSGESSTGANGS--AQARKVGFIPPGD 367 P +V+P LGAT A+ T G G L G + +G ++G IP Sbjct: 134 PIEVIPFGLGATRRALQNAFTAAGCDGELKLRPGKDGHAFVTDGGHWILDAQLGRIPDAP 193 Query: 368 FLMSLLSDVPTDAPH 412 L LLS +P H Sbjct: 194 RLAQLLSVIPGVVEH 208
>KR106_HUMAN (P60371) Keratin-associated protein 10-6 (Keratin-associated| protein 10.6) (High sulfur keratin-associated protein 10.6) (Keratin-associated protein 18-6) (Keratin-associated protein 18.6) Length = 365 Score = 28.9 bits (63), Expect = 5.7 Identities = 15/44 (34%), Positives = 22/44 (50%) Frame = +1 Query: 85 SCC*SVAPI*CYCSGCCSDILPKRTPSICYSFQSETSTGCSPAC 216 SCC + + C S CC + PS C QS ++ C+P+C Sbjct: 171 SCCQQSSCVSCVSSPCCQAVC---EPSPC---QSGCTSSCTPSC 208
>NUDEL_DROME (P98159) Serine protease nudel precursor (EC 3.4.21.-)| Length = 2616 Score = 28.9 bits (63), Expect = 5.7 Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 2/95 (2%) Frame = +2 Query: 47 KKEIMSSPDNTVSVVVDRWLRFDATALDVAQIYCLRERLASAILFKVKHPQDVLPPALGA 226 KKE +P NT +V + DATA + + E++ S IL PQ++L G Sbjct: 282 KKETTKAPWNTTQLVEITTTKIDATATERTTVESTTEKI-SWILDHFDKPQEILRTTEGP 340 Query: 227 TMYAIACILTYDGLPGNL--TTNHGSGESSTGANG 325 I + T + T N S T NG Sbjct: 341 GQRIIRNVTTTSASSEPIVDTENTNSDHVPTTENG 375
>LRC21_RAT (Q9JMH2) Leucine-rich repeat-containing protein 21 precursor| (Photoreceptor-associated LRR superfamily protein) (Retina-specific protein PAL) Length = 617 Score = 28.9 bits (63), Expect = 5.7 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 7/54 (12%) Frame = +2 Query: 218 LGATMYAIACILT-------YDGLPGNLTTNHGSGESSTGANGSAQARKVGFIP 358 LGA+ I+ I+T Y G+PG L G G + N AR V +P Sbjct: 328 LGASETLISLIVTEPQTSTEYTGIPGALWARTGEGAEAAAYNNKLVARHVPHVP 381
>BAR3_CHITE (Q03376) Balbiani ring protein 3 precursor| Length = 1700 Score = 28.5 bits (62), Expect = 7.4 Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 3/49 (6%) Frame = +1 Query: 115 CYCSG---CCSDILPKRTPSICYSFQSETSTGCSPACSWSNDVCDCLYP 252 C C G C + + C +E + GCS W +D C C P Sbjct: 200 CECKGDGKCQGSKIWCKNNCRCICPTAEPAGGCSAPLKWDDDKCSCACP 248
>SIXC_MESMA (Q9Y1U3) Depressant insect neurotoxin BmK ITc precursor| Length = 85 Score = 28.1 bits (61), Expect = 9.7 Identities = 9/16 (56%), Positives = 10/16 (62%) Frame = +1 Query: 193 STGCSPACSWSNDVCD 240 S GC +C W ND CD Sbjct: 28 SDGCKVSCLWGNDFCD 43
>BRC1_DROME (Q01295) Broad-complex core-protein isoforms 1/2/3/4/5| Length = 727 Score = 28.1 bits (61), Expect = 9.7 Identities = 14/54 (25%), Positives = 26/54 (48%) Frame = +2 Query: 272 GNLTTNHGSGESSTGANGSAQARKVGFIPPGDFLMSLLSDVPTDAPHYQKSSNN 433 GN +G+G ++ NG + + K+G + P + DV ++ S+NN Sbjct: 284 GNSGNGNGNGNGASNGNGISISDKLGSLTPSPLARAGADDVKSEPMDMVCSNNN 337
>LRC21_MOUSE (Q8K099) Leucine-rich repeat-containing protein 21 precursor| (Photoreceptor-associated LRR superfamily protein) (Retina-specific protein PAL) Length = 618 Score = 28.1 bits (61), Expect = 9.7 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 7/54 (12%) Frame = +2 Query: 218 LGATMYAIACILT-------YDGLPGNLTTNHGSGESSTGANGSAQARKVGFIP 358 LGA+ I+ I+T Y G+PG L G G + N AR V +P Sbjct: 329 LGASETLISLIVTEPQTSTGYSGIPGVLWARTGEGAEAAAYNNKLVARHVPHMP 382
>BRC4_DROME (Q24206) Broad-complex core-protein isoform 6| Length = 880 Score = 28.1 bits (61), Expect = 9.7 Identities = 14/54 (25%), Positives = 26/54 (48%) Frame = +2 Query: 272 GNLTTNHGSGESSTGANGSAQARKVGFIPPGDFLMSLLSDVPTDAPHYQKSSNN 433 GN +G+G ++ NG + + K+G + P + DV ++ S+NN Sbjct: 284 GNSGNGNGNGNGASNGNGISISDKLGSLTPSPLARAGADDVKSEPMDMVCSNNN 337 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,859,040 Number of Sequences: 219361 Number of extensions: 1033064 Number of successful extensions: 3167 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3089 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3165 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2511994855 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
