Clone Name	baet67g03
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|DQ336893.1| Hordeum vulgare UDP-D-xylose epimerase 1 (UXE1) m...	799	0.0
2	ref|XM_476598.1| Oryza sativa (japonica cultivar-group), mRNA	190	3e-45
3	ref|XM_507350.1| PREDICTED Oryza sativa (japonica cultivar-group...	190	3e-45
4	ref|XM_506159.2| PREDICTED Oryza sativa (japonica cultivar-group...	190	3e-45
5	dbj|AK099183.1| Oryza sativa (japonica cultivar-group) cDNA clon...	190	3e-45
6	dbj|AK099140.1| Oryza sativa (japonica cultivar-group) cDNA clon...	190	3e-45
7	dbj|AK065558.1| Oryza sativa (japonica cultivar-group) cDNA clon...	190	3e-45
8	dbj|AB096864.1| Oryza sativa (japonica cultivar-group) OsUEL-1 m...	190	3e-45
9	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	157	4e-35
10	dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic D...	157	4e-35
11	dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic D...	157	4e-35
12	emb|Y09584.1|MMPAX4GEN M.musculus Pax-4 mRNA, partial	48	0.025
13	ref|NM_011038.1| Mus musculus paired box gene 4 (Pax4), mRNA	48	0.025
14	gb|AF104231.1|AF104231 Mus musculus paired-homeodomain transcrip...	48	0.025
15	gb|AF145233.1|AF145233 Mus musculus transcription factor PAX4 (P...	48	0.025
16	gb|AF031150.1|AF031150 Mus musculus paired-box transcription fac...	48	0.025
17	dbj|AB008912.1| Mus musculus mRNA for Pax-4, complete cds	48	0.025
18	dbj|AB010558.1| Mus musculus mRNA for Pax4, complete cds	48	0.025
19	dbj|AB010557.1| Mus musculus mRNA for Pax4, complete cds	48	0.025
20	ref|XM_476032.1| Oryza sativa (japonica cultivar-group), predic...	42	1.5
21	gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome...	42	1.5
22	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.5
23	gb|BC091355.1| Rattus norvegicus cDNA clone MGC:109397 IMAGE:731...	42	1.5
24	ref|XM_574941.1| PREDICTED: Rattus norvegicus similar to RIKEN c...	42	1.5
25	dbj|AK066249.1| Oryza sativa (japonica cultivar-group) cDNA clon...	42	1.5
26	dbj|AB087745.1| Oryza sativa (japonica cultivar-group) OsUGE-1 m...	42	1.5
27	ref|NM_031799.1| Rattus norvegicus paired box gene 4 (Pax4), mRNA	40	6.1
28	gb|AC153544.4| Mus musculus 10 BAC RP23-326C6 (Roswell Park Canc...	40	6.1
29	ref|XM_424154.1| PREDICTED: Gallus gallus similar to HMG domain ...	40	6.1
30	ref|XM_416988.1| PREDICTED: Gallus gallus similar to dTDP-D-gluc...	40	6.1
31	gb|AC092268.4| Homo sapiens chromosome X clone RP11-185O17 map p...	40	6.1
32	ref|XM_618443.2| PREDICTED: Bos taurus similar to amiloride-sens...	40	6.1
33	gb|AC144453.2| Oryza sativa (japonica cultivar-group) chromosome...	40	6.1
34	gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome...	40	6.1
35	emb|AL589862.28| Human DNA sequence from clone GS1-165F21 on chr...	40	6.1
36	emb|AL391259.15| Human DNA sequence from clone RP11-469E19 on ch...	40	6.1
37	gb|CP000133.1| Rhizobium etli CFN 42, complete genome	40	6.1
38	gb|AC000159.6| Homo sapiens Chromosome 11q13 BAC Clone b79g17, c...	40	6.1
39	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	40	6.1
40	gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 dapto...	40	6.1
41	dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g...	40	6.1
42	dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic D...	40	6.1
43	dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic D...	40	6.1
44	gb|AF198156.1|AF198156 Rattus norvegicus Pax4c mRNA, complete cds	40	6.1
45	gb|AF198155.1|AF198155 Rattus norvegicus Pax4a mRNA, complete cds	40	6.1
46	dbj|AK100068.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	6.1
47	gb|AC006147.2|AC006147 Homo sapiens PAC clone RP4-755D9 from Xq2...	40	6.1
48	emb|AL161669.5|CNS01RHC Human chromosome 14 DNA sequence BAC R-7...	40	6.1
49	emb|AL138976.5|CNS01DWY Human chromosome 14 DNA sequence BAC R-4...	40	6.1
50	dbj|AP001187.5| Homo sapiens genomic DNA, chromosome 11 clone:RP...	40	6.1
51	dbj|AP002348.3| Homo sapiens genomic DNA, chromosome 11q, clone:...	40	6.1
52	gb|AC153484.4| Mus musculus 10 BAC RP23-388B8 (Roswell Park Canc...	40	6.1
53	gb|AF053103.1|AF053103 Rattus norvegicus Pax4d mRNA, complete cds	40	6.1
54	gb|AF053102.1|AF053102 Rattus norvegicus Pax4c mRNA, complete cds	40	6.1
55	gb|AF053101.1|AF053101 Rattus norvegicus Pax4b mRNA, complete cds	40	6.1
56	gb|AF053100.1|AF053100 Rattus norvegicus Pax4a mRNA, complete cds	40	6.1
57	gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome	40	6.1
58	gb|L36648.1|POTADPGLU Solanum tuberosum ADP-glucose pyrophosphor...	40	6.1

---

>gb|DQ336893.1| Hordeum vulgare UDP-D-xylose epimerase 1 (UXE1) mRNA, complete cds
          Length = 1508

 Score =  799 bits (403), Expect = 0.0
 Identities = 409/411 (99%)
 Strand = Plus / Plus

                                                                       
Query: 44  cactcccgcaattctttccctgttccgctgctgtaaagggcagggcggagcagcctggaa 103
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cactcccgcaattctttccctgttccgctgctgtaaagggcagggcggagcagcctggaa 60

                                                                       
Query: 104 cagggttgttggatctgactatctgagccagtgacctctcgccgccagccgcgggcagat 163
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  cagggttgttggatctgactatctgagccagtgacctctcgccgccagccgcgggcagat 120

                                                                       
Query: 164 gctgccggccggcaggagcaggccgcagcccaggcctgcgccgagatcttggtccttctc 223
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctgccgaccggcaggagcaggccgcagcccaggcctgcgccgagatcttggtccttctc 180

                                                                       
Query: 224 agacatggacttctcggacccgaagcgcaagtccaggtacctcagcaagatcatcatggt 283
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agacatggacttctcggacccgaagcgcaagtccaggtacctcagcaagatcatcatggt 240

                                                                       
Query: 284 ggcgctcctcacggccatgtgcgtcgtcatgctcacccagccaccctgccacaggaaggc 343
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggcgctcctcacggccatgtgcgtcgtcatgctcacccagccaccctgccacaggaaggc 300

                                                                       
Query: 344 tcccagtgtgtcctctatccatgaactcggagtaactcatgtgttggtgacgggtggcgc 403
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcccagtgtgttctctatccatgaactcggagtaactcatgtgttggtgacgggtggcgc 360

                                                              
Query: 404 cggctacataggatcgcatgcggctctacgactgctcaatgactctttcag 454
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cggctacataggatcgcatgcggctctacgactgctcaatgactctttcag 411

---

>ref|XM_476598.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1761

 Score =  190 bits (96), Expect = 3e-45
 Identities = 162/184 (88%)
 Strand = Plus / Plus

                                                                       
Query: 220 tctcagacatggacttctcggacccgaagcgcaagtccaggtacctcagcaagatcatca 279
           ||||||||||||||||||| || |||||||||||| |  |||||||||| |||||| |||
Sbjct: 321 tctcagacatggacttctccgatccgaagcgcaagccgcggtacctcagtaagatcctca 380

                                                                       
Query: 280 tggtggcgctcctcacggccatgtgcgtcgtcatgctcacccagccaccctgccacagga 339
           |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct: 381 tggtggcgctcctcaccgccatgtgcgtcgtcatgctcacacagccgccctgccatagga 440

                                                                       
Query: 340 aggctcccagtgtgtcctctatccatgaactcggagtaactcatgtgttggtgacgggtg 399
            | |||||||||||| ||| |||||||||| |||||| || |||||  | |||||||| |
Sbjct: 441 ggactcccagtgtgttctccatccatgaacccggagtcacgcatgttctagtgacgggcg 500

               
Query: 400 gcgc 403
           ||||
Sbjct: 501 gcgc 504

---

>ref|XM_507350.1| PREDICTED Oryza sativa (japonica cultivar-group), P0495H05.61 mRNA
          Length = 1765

 Score =  190 bits (96), Expect = 3e-45
 Identities = 162/184 (88%)
 Strand = Plus / Plus

                                                                       
Query: 220 tctcagacatggacttctcggacccgaagcgcaagtccaggtacctcagcaagatcatca 279
           ||||||||||||||||||| || |||||||||||| |  |||||||||| |||||| |||
Sbjct: 332 tctcagacatggacttctccgatccgaagcgcaagccgcggtacctcagtaagatcctca 391

                                                                       
Query: 280 tggtggcgctcctcacggccatgtgcgtcgtcatgctcacccagccaccctgccacagga 339
           |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct: 392 tggtggcgctcctcaccgccatgtgcgtcgtcatgctcacacagccgccctgccatagga 451

                                                                       
Query: 340 aggctcccagtgtgtcctctatccatgaactcggagtaactcatgtgttggtgacgggtg 399
            | |||||||||||| ||| |||||||||| |||||| || |||||  | |||||||| |
Sbjct: 452 ggactcccagtgtgttctccatccatgaacccggagtcacgcatgttctagtgacgggcg 511

               
Query: 400 gcgc 403
           ||||
Sbjct: 512 gcgc 515

---

>ref|XM_506159.2| PREDICTED Oryza sativa (japonica cultivar-group), P0495H05.61 mRNA
          Length = 1824

 Score =  190 bits (96), Expect = 3e-45
 Identities = 162/184 (88%)
 Strand = Plus / Plus

                                                                       
Query: 220 tctcagacatggacttctcggacccgaagcgcaagtccaggtacctcagcaagatcatca 279
           ||||||||||||||||||| || |||||||||||| |  |||||||||| |||||| |||
Sbjct: 358 tctcagacatggacttctccgatccgaagcgcaagccgcggtacctcagtaagatcctca 417

                                                                       
Query: 280 tggtggcgctcctcacggccatgtgcgtcgtcatgctcacccagccaccctgccacagga 339
           |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct: 418 tggtggcgctcctcaccgccatgtgcgtcgtcatgctcacacagccgccctgccatagga 477

                                                                       
Query: 340 aggctcccagtgtgtcctctatccatgaactcggagtaactcatgtgttggtgacgggtg 399
            | |||||||||||| ||| |||||||||| |||||| || |||||  | |||||||| |
Sbjct: 478 ggactcccagtgtgttctccatccatgaacccggagtcacgcatgttctagtgacgggcg 537

               
Query: 400 gcgc 403
           ||||
Sbjct: 538 gcgc 541

---

>dbj|AK099183.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099C15, full
           insert sequence
          Length = 1761

 Score =  190 bits (96), Expect = 3e-45
 Identities = 162/184 (88%)
 Strand = Plus / Plus

                                                                       
Query: 220 tctcagacatggacttctcggacccgaagcgcaagtccaggtacctcagcaagatcatca 279
           ||||||||||||||||||| || |||||||||||| |  |||||||||| |||||| |||
Sbjct: 321 tctcagacatggacttctccgatccgaagcgcaagccgcggtacctcagtaagatcctca 380

                                                                       
Query: 280 tggtggcgctcctcacggccatgtgcgtcgtcatgctcacccagccaccctgccacagga 339
           |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct: 381 tggtggcgctcctcaccgccatgtgcgtcgtcatgctcacacagccgccctgccatagga 440

                                                                       
Query: 340 aggctcccagtgtgtcctctatccatgaactcggagtaactcatgtgttggtgacgggtg 399
            | |||||||||||| ||| |||||||||| |||||| || |||||  | |||||||| |
Sbjct: 441 ggactcccagtgtgttctccatccatgaacccggagtcacgcatgttctagtgacgggcg 500

               
Query: 400 gcgc 403
           ||||
Sbjct: 501 gcgc 504

---

>dbj|AK099140.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023053D14, full
           insert sequence
          Length = 1765

 Score =  190 bits (96), Expect = 3e-45
 Identities = 162/184 (88%)
 Strand = Plus / Plus

                                                                       
Query: 220 tctcagacatggacttctcggacccgaagcgcaagtccaggtacctcagcaagatcatca 279
           ||||||||||||||||||| || |||||||||||| |  |||||||||| |||||| |||
Sbjct: 331 tctcagacatggacttctccgatccgaagcgcaagccgcggtacctcagtaagatcctca 390

                                                                       
Query: 280 tggtggcgctcctcacggccatgtgcgtcgtcatgctcacccagccaccctgccacagga 339
           |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct: 391 tggtggcgctcctcaccgccatgtgcgtcgtcatgctcacacagccgccctgccatagga 450

                                                                       
Query: 340 aggctcccagtgtgtcctctatccatgaactcggagtaactcatgtgttggtgacgggtg 399
            | |||||||||||| ||| |||||||||| |||||| || |||||  | |||||||| |
Sbjct: 451 ggactcccagtgtgttctccatccatgaacccggagtcacgcatgttctagtgacgggcg 510

               
Query: 400 gcgc 403
           ||||
Sbjct: 511 gcgc 514

---

>dbj|AK065558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013033B01, full
           insert sequence
          Length = 1822

 Score =  190 bits (96), Expect = 3e-45
 Identities = 162/184 (88%)
 Strand = Plus / Plus

                                                                       
Query: 220 tctcagacatggacttctcggacccgaagcgcaagtccaggtacctcagcaagatcatca 279
           ||||||||||||||||||| || |||||||||||| |  |||||||||| |||||| |||
Sbjct: 357 tctcagacatggacttctccgatccgaagcgcaagccgcggtacctcagtaagatcctca 416

                                                                       
Query: 280 tggtggcgctcctcacggccatgtgcgtcgtcatgctcacccagccaccctgccacagga 339
           |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct: 417 tggtggcgctcctcaccgccatgtgcgtcgtcatgctcacacagccgccctgccatagga 476

                                                                       
Query: 340 aggctcccagtgtgtcctctatccatgaactcggagtaactcatgtgttggtgacgggtg 399
            | |||||||||||| ||| |||||||||| |||||| || |||||  | |||||||| |
Sbjct: 477 ggactcccagtgtgttctccatccatgaacccggagtcacgcatgttctagtgacgggcg 536

               
Query: 400 gcgc 403
           ||||
Sbjct: 537 gcgc 540

---

>dbj|AB096864.1| Oryza sativa (japonica cultivar-group) OsUEL-1 mRNA for
           UDP-galactose 4-epimerase-like protein, complete cds
          Length = 1516

 Score =  190 bits (96), Expect = 3e-45
 Identities = 162/184 (88%)
 Strand = Plus / Plus

                                                                       
Query: 220 tctcagacatggacttctcggacccgaagcgcaagtccaggtacctcagcaagatcatca 279
           ||||||||||||||||||| || |||||||||||| |  |||||||||| |||||| |||
Sbjct: 153 tctcagacatggacttctccgatccgaagcgcaagccgcggtacctcagtaagatcctca 212

                                                                       
Query: 280 tggtggcgctcctcacggccatgtgcgtcgtcatgctcacccagccaccctgccacagga 339
           |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||
Sbjct: 213 tggtggcgctcctcaccgccatgtgcgtcgtcatgctcacacagccgccctgccatagga 272

                                                                       
Query: 340 aggctcccagtgtgtcctctatccatgaactcggagtaactcatgtgttggtgacgggtg 399
            | |||||||||||| ||| |||||||||| |||||| || |||||  | |||||||| |
Sbjct: 273 ggactcccagtgtgttctccatccatgaacccggagtcacgcatgttctagtgacgggcg 332

               
Query: 400 gcgc 403
           ||||
Sbjct: 333 gcgc 336

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  157 bits (79), Expect = 4e-35
 Identities = 118/131 (90%)
 Strand = Plus / Plus

                                                                           
Query: 223     cagacatggacttctcggacccgaagcgcaagtccaggtacctcagcaagatcatcatgg 282
               |||||||||||||||| || |||||||||||| |  |||||||||| |||||| ||||||
Sbjct: 2113229 cagacatggacttctccgatccgaagcgcaagccgcggtacctcagtaagatcctcatgg 2113288

                                                                           
Query: 283     tggcgctcctcacggccatgtgcgtcgtcatgctcacccagccaccctgccacaggaagg 342
               ||||||||||||| ||||||||||||||||||||||| ||||| |||||||| |||| | 
Sbjct: 2113289 tggcgctcctcaccgccatgtgcgtcgtcatgctcacacagccgccctgccataggagga 2113348

                          
Query: 343     ctcccagtgtg 353
               |||||||||||
Sbjct: 2113349 ctcccagtgtg 2113359

---

>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0495H05
          Length = 205595

 Score =  157 bits (79), Expect = 4e-35
 Identities = 118/131 (90%)
 Strand = Plus / Plus

                                                                          
Query: 223    cagacatggacttctcggacccgaagcgcaagtccaggtacctcagcaagatcatcatgg 282
              |||||||||||||||| || |||||||||||| |  |||||||||| |||||| ||||||
Sbjct: 197526 cagacatggacttctccgatccgaagcgcaagccgcggtacctcagtaagatcctcatgg 197585

                                                                          
Query: 283    tggcgctcctcacggccatgtgcgtcgtcatgctcacccagccaccctgccacaggaagg 342
              ||||||||||||| ||||||||||||||||||||||| ||||| |||||||| |||| | 
Sbjct: 197586 tggcgctcctcaccgccatgtgcgtcgtcatgctcacacagccgccctgccataggagga 197645

                         
Query: 343    ctcccagtgtg 353
              |||||||||||
Sbjct: 197646 ctcccagtgtg 197656

---

>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1417_E01
          Length = 118058

 Score =  157 bits (79), Expect = 4e-35
 Identities = 118/131 (90%)
 Strand = Plus / Plus

                                                                         
Query: 223   cagacatggacttctcggacccgaagcgcaagtccaggtacctcagcaagatcatcatgg 282
             |||||||||||||||| || |||||||||||| |  |||||||||| |||||| ||||||
Sbjct: 69022 cagacatggacttctccgatccgaagcgcaagccgcggtacctcagtaagatcctcatgg 69081

                                                                         
Query: 283   tggcgctcctcacggccatgtgcgtcgtcatgctcacccagccaccctgccacaggaagg 342
             ||||||||||||| ||||||||||||||||||||||| ||||| |||||||| |||| | 
Sbjct: 69082 tggcgctcctcaccgccatgtgcgtcgtcatgctcacacagccgccctgccataggagga 69141

                        
Query: 343   ctcccagtgtg 353
             |||||||||||
Sbjct: 69142 ctcccagtgtg 69152

---

>emb|Y09584.1|MMPAX4GEN M.musculus Pax-4 mRNA, partial
          Length = 613

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 339 aaggctcccagtgtgtcctctatc 362
           ||||||||||||||||||||||||
Sbjct: 251 aaggctcccagtgtgtcctctatc 274

---

>ref|NM_011038.1| Mus musculus paired box gene 4 (Pax4), mRNA
          Length = 1295

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 339 aaggctcccagtgtgtcctctatc 362
           ||||||||||||||||||||||||
Sbjct: 555 aaggctcccagtgtgtcctctatc 578

---

>gb|AF104231.1|AF104231 Mus musculus paired-homeodomain transcription factor PAX4 (Pax4)
           mRNA, complete cds
          Length = 1135

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 339 aaggctcccagtgtgtcctctatc 362
           ||||||||||||||||||||||||
Sbjct: 367 aaggctcccagtgtgtcctctatc 390

---

>gb|AF145233.1|AF145233 Mus musculus transcription factor PAX4 (Pax4) mRNA, complete cds
          Length = 1360

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 339 aaggctcccagtgtgtcctctatc 362
           ||||||||||||||||||||||||
Sbjct: 559 aaggctcccagtgtgtcctctatc 582

---

>gb|AF031150.1|AF031150 Mus musculus paired-box transcription factor (Pax4) mRNA, complete
           cds
          Length = 1379

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 339 aaggctcccagtgtgtcctctatc 362
           ||||||||||||||||||||||||
Sbjct: 645 aaggctcccagtgtgtcctctatc 668

---

>dbj|AB008912.1| Mus musculus mRNA for Pax-4, complete cds
          Length = 1324

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 339 aaggctcccagtgtgtcctctatc 362
           ||||||||||||||||||||||||
Sbjct: 587 aaggctcccagtgtgtcctctatc 610

---

>dbj|AB010558.1| Mus musculus mRNA for Pax4, complete cds
          Length = 1310

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 339 aaggctcccagtgtgtcctctatc 362
           ||||||||||||||||||||||||
Sbjct: 570 aaggctcccagtgtgtcctctatc 593

---

>dbj|AB010557.1| Mus musculus mRNA for Pax4, complete cds
          Length = 1295

 Score = 48.1 bits (24), Expect = 0.025
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 339 aaggctcccagtgtgtcctctatc 362
           ||||||||||||||||||||||||
Sbjct: 555 aaggctcccagtgtgtcctctatc 578

---

>ref|XM_476032.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1065

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 388 tggtgacgggtggcgccggctacat 412
           |||||||||| ||||||||||||||
Sbjct: 29  tggtgacgggcggcgccggctacat 53

---

>gb|AC136217.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0030I14, complete sequence
          Length = 159035

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 388   tggtgacgggtggcgccggctacat 412
             |||||||||| ||||||||||||||
Sbjct: 59820 tggtgacgggcggcgccggctacat 59844

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 388      tggtgacgggtggcgccggctacat 412
                |||||||||| ||||||||||||||
Sbjct: 29411795 tggtgacgggcggcgccggctacat 29411819



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 137      acctctcgccgccagccgcg 156
                ||||||||||||||||||||
Sbjct: 12135231 acctctcgccgccagccgcg 12135212

---

>gb|BC091355.1| Rattus norvegicus cDNA clone MGC:109397 IMAGE:7318141, complete cds
          Length = 1857

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 177 aggagcaggccgcagcccaggcctg 201
           ||||||||||| |||||||||||||
Sbjct: 445 aggagcaggccacagcccaggcctg 421

---

>ref|XM_574941.1| PREDICTED: Rattus norvegicus similar to RIKEN cDNA 2810489O06
           (LOC499615), mRNA
          Length = 1893

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 177 aggagcaggccgcagcccaggcctg 201
           ||||||||||| |||||||||||||
Sbjct: 494 aggagcaggccacagcccaggcctg 470

---

>dbj|AK066249.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013051I17, full
           insert sequence
          Length = 3495

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 388 tggtgacgggtggcgccggctacat 412
           |||||||||| ||||||||||||||
Sbjct: 140 tggtgacgggcggcgccggctacat 164

---

>dbj|AB087745.1| Oryza sativa (japonica cultivar-group) OsUGE-1 mRNA for UDP-glucose
           4-epimerase, complete cds
          Length = 1346

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 388 tggtgacgggtggcgccggctacat 412
           |||||||||| ||||||||||||||
Sbjct: 115 tggtgacgggcggcgccggctacat 139

---

>ref|NM_031799.1| Rattus norvegicus paired box gene 4 (Pax4), mRNA
          Length = 1101

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 339 aaggctcccagtgtgtcctctatc 362
           |||||||||||||| |||||||||
Sbjct: 397 aaggctcccagtgtatcctctatc 420

---

>gb|AC153544.4| Mus musculus 10 BAC RP23-326C6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 215036

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 90    ggagcagcctggaacagggt 109
             ||||||||||||||||||||
Sbjct: 32654 ggagcagcctggaacagggt 32635

---

>ref|XM_424154.1| PREDICTED: Gallus gallus similar to HMG domain protein HMGX2
           (LOC426515), mRNA
          Length = 1475

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 328 cctgccacaggaaggctccc 347
           ||||||||||||||||||||
Sbjct: 412 cctgccacaggaaggctccc 393

---

>ref|XM_416988.1| PREDICTED: Gallus gallus similar to dTDP-D-glucose 4,6-dehydratase
           (LOC418793), mRNA
          Length = 2138

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 385 tgttggtgacgggtggcgccggct 408
           ||||||||||||| ||||||||||
Sbjct: 50  tgttggtgacgggcggcgccggct 73

---

>gb|AC092268.4| Homo sapiens chromosome X clone RP11-185O17 map p11.4, complete sequence
          Length = 183539

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 35     gccttcctccactcccgcaattct 58
              ||||||||||| ||||||||||||
Sbjct: 158040 gccttcctccagtcccgcaattct 158017

---

>ref|XM_618443.2| PREDICTED: Bos taurus similar to amiloride-sensitive cation channel
           2, neuronal isoform b (LOC538244), mRNA
          Length = 1719

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 328 cctgccacaggaaggctcccagtg 351
           |||| |||||||||||||||||||
Sbjct: 355 cctggcacaggaaggctcccagtg 332

---

>gb|AC144453.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OSJNBa0050A24, complete sequence
          Length = 142574

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   acctctcgccgccagccgcg 156
             ||||||||||||||||||||
Sbjct: 88921 acctctcgccgccagccgcg 88902

---

>gb|AC144452.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
             OSJNBa0025G07, complete sequence
          Length = 167136

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   acctctcgccgccagccgcg 156
             ||||||||||||||||||||
Sbjct: 12343 acctctcgccgccagccgcg 12324

---

>emb|AL589862.28| Human DNA sequence from clone GS1-165F21 on chromosome 10 Contains the 5'
              end of the PAX2 gene for paired box gene 2 and fifteen CpG
              islands, complete sequence
          Length = 187101

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     ccgctgctgtaaagggcagg 87
              ||||||||||||||||||||
Sbjct: 135167 ccgctgctgtaaagggcagg 135186

---

>emb|AL391259.15| Human DNA sequence from clone RP11-469E19 on chromosome Xp11.4-21.2
            Contains a chloride intracellular channel 4 (CLIC4)
            pseudogene the 5' end of the USP9X gene for X chromosome
            ubiquitin specific protease 9 (Drosophila fat facets
            related) and a CpG island, complete sequence
          Length = 163520

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 35   gccttcctccactcccgcaattct 58
            ||||||||||| ||||||||||||
Sbjct: 3675 gccttcctccagtcccgcaattct 3652

---

>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 387    ttggtgacgggtggcgccgg 406
              ||||||||||||||||||||
Sbjct: 591888 ttggtgacgggtggcgccgg 591907

---

>gb|AC000159.6| Homo sapiens Chromosome 11q13 BAC Clone b79g17, complete sequence
          Length = 108523

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 314   gctcacccagccaccctgcc 333
             ||||||||||||||||||||
Sbjct: 74270 gctcacccagccaccctgcc 74251

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 159      cagatgctgccggccggcag 178
                ||||||||||||||||||||
Sbjct: 28950003 cagatgctgccggccggcag 28950022



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 137      acctctcgccgccagccgcg 156
                ||||||||||||||||||||
Sbjct: 12141088 acctctcgccgccagccgcg 12141069

---

>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic
             gene cluster, partial sequence
          Length = 127559

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 165   ctgccggccggcaggagcag 184
             ||||||||||||||||||||
Sbjct: 28421 ctgccggccggcaggagcag 28440

---

>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 188    gcagcccaggcctgcgccga 207
              ||||||||||||||||||||
Sbjct: 467604 gcagcccaggcctgcgccga 467623

---

>dbj|AP005476.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0026D20
          Length = 130634

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 137   acctctcgccgccagccgcg 156
             ||||||||||||||||||||
Sbjct: 89393 acctctcgccgccagccgcg 89374

---

>dbj|AP004052.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1218_D07
          Length = 114511

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   cagatgctgccggccggcag 178
             ||||||||||||||||||||
Sbjct: 33061 cagatgctgccggccggcag 33080

---

>gb|AF198156.1|AF198156 Rattus norvegicus Pax4c mRNA, complete cds
          Length = 672

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 339 aaggctcccagtgtgtcctctatc 362
           |||||||||||||| |||||||||
Sbjct: 349 aaggctcccagtgtatcctctatc 372

---

>gb|AF198155.1|AF198155 Rattus norvegicus Pax4a mRNA, complete cds
          Length = 1050

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 339 aaggctcccagtgtgtcctctatc 362
           |||||||||||||| |||||||||
Sbjct: 349 aaggctcccagtgtatcctctatc 372

---

>dbj|AK100068.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163B17, full
           insert sequence
          Length = 3301

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 159 cagatgctgccggccggcag 178
           ||||||||||||||||||||
Sbjct: 497 cagatgctgccggccggcag 478

---

>gb|AC006147.2|AC006147 Homo sapiens PAC clone RP4-755D9 from Xq23, complete sequence
          Length = 38991

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 166   tgccggccggcaggagcagg 185
             ||||||||||||||||||||
Sbjct: 26434 tgccggccggcaggagcagg 26453

---

>emb|AL161669.5|CNS01RHC Human chromosome 14 DNA sequence BAC R-736N17 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 192462

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   aggccgcagcccaggcctgc 202
             ||||||||||||||||||||
Sbjct: 35218 aggccgcagcccaggcctgc 35199

---

>emb|AL138976.5|CNS01DWY Human chromosome 14 DNA sequence BAC R-45P15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 167357

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 183   aggccgcagcccaggcctgc 202
             ||||||||||||||||||||
Sbjct: 17794 aggccgcagcccaggcctgc 17813

---

>dbj|AP001187.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-665N17, complete
              sequence
          Length = 171793

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 314    gctcacccagccaccctgcc 333
              ||||||||||||||||||||
Sbjct: 104236 gctcacccagccaccctgcc 104255

---

>dbj|AP002348.3| Homo sapiens genomic DNA, chromosome 11q, clone:CTD-2528N2, complete
              sequences
          Length = 208600

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     ggcagggcggagcagcctgg 101
              ||||||||||||||||||||
Sbjct: 190618 ggcagggcggagcagcctgg 190599

---

>gb|AC153484.4| Mus musculus 10 BAC RP23-388B8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 166648

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 90     ggagcagcctggaacagggt 109
              ||||||||||||||||||||
Sbjct: 157796 ggagcagcctggaacagggt 157777

---

>gb|AF053103.1|AF053103 Rattus norvegicus Pax4d mRNA, complete cds
          Length = 692

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 339 aaggctcccagtgtgtcctctatc 362
           |||||||||||||| |||||||||
Sbjct: 397 aaggctcccagtgtatcctctatc 420

---

>gb|AF053102.1|AF053102 Rattus norvegicus Pax4c mRNA, complete cds
          Length = 818

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 339 aaggctcccagtgtgtcctctatc 362
           |||||||||||||| |||||||||
Sbjct: 397 aaggctcccagtgtatcctctatc 420

---

>gb|AF053101.1|AF053101 Rattus norvegicus Pax4b mRNA, complete cds
          Length = 975

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 339 aaggctcccagtgtgtcctctatc 362
           |||||||||||||| |||||||||
Sbjct: 397 aaggctcccagtgtatcctctatc 420

---

>gb|AF053100.1|AF053100 Rattus norvegicus Pax4a mRNA, complete cds
          Length = 1101

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 339 aaggctcccagtgtgtcctctatc 362
           |||||||||||||| |||||||||
Sbjct: 397 aaggctcccagtgtatcctctatc 420

---

>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 320    ccagccaccctgccacagga 339
              ||||||||||||||||||||
Sbjct: 900682 ccagccaccctgccacagga 900701

---

>gb|L36648.1|POTADPGLU Solanum tuberosum ADP-glucose pyrophosphorylase small-subunit gene
            exons 1-9, complete cds
          Length = 5820

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 112  ttggatctgactatctgagc 131
            ||||||||||||||||||||
Sbjct: 1557 ttggatctgactatctgagc 1576


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,403,317
Number of Sequences: 3902068
Number of extensions: 3403317
Number of successful extensions: 63146
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62845
Number of HSP's gapped (non-prelim): 301
length of query: 454
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 432
effective length of database: 17,147,199,772
effective search space: 7407590301504
effective search space used: 7407590301504
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---