| Clone Name | baet67e06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY596575.1| Saccharum officinarum clone SCCCLR1067F01, complete sequence Length = 1457 Score = 367 bits (185), Expect = 2e-98 Identities = 329/377 (87%) Strand = Plus / Plus Query: 70 tcggcgaggatggaaatgctcttcagcagcctgttctgtgactcagcgtcatcggagaac 129 |||||||||||||||||| | ||| ||||| | || |||| ||||| |||||| ||| | Sbjct: 61 tcggcgaggatggaaatgtttttcggcagctttctcagtgaatcagcatcatcgcagagc 120 Query: 130 ttttctggccatcccggtgttgagagatgcccattcctgaggaacatcaatggagccaca 189 ||| |||| || | ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 121 cttttcagccacccggatgttgagagatgcccattcctgaggaacatcaatggagctaca 180 Query: 190 accttttcattttcttctgctttgcctgtagctgcccggggaggcaagggtccgatcttt 249 |||||||| || ||||||||||||| ||||||||||| |||||||||||||| || ||| Sbjct: 181 accttttccttcacttctgctttgccagtagctgcccgaggaggcaagggtccaattttt 240 Query: 250 gaggatggaccaggctttgagtcggcattcaagcttttccatggacaggatgggatagtc 309 |||||||||||||| |||||||| |||||||||||||||||||| | ||||| ||||| Sbjct: 241 gaggatggaccaggttttgagtcagcattcaagcttttccatggccgagatggaatagtt 300 Query: 310 cccctttcaggaagatcatatgtgcctgatgagaacggcagtgagagcactgatgtcaag 369 |||||||||| |||||||||||| ||||||| ||| || |||||||| |||||||||| Sbjct: 301 cccctttcagaaagatcatatgtatctgatgaaaaccacaatgagagcattgatgtcaag 360 Query: 370 cctgaacctgctctgccctttaatccattggctgctagagccgctaccataagtctatca 429 |||||||||||||||| ||||||||||||||||||||||| || | |||||||||||| Sbjct: 361 actgaacctgctctgccatttaatccattggctgctagagcagcctcaataagtctatca 420 Query: 430 tcatttggaccatttgg 446 |||||||||||||||| Sbjct: 421 gcatttggaccatttgg 437
>ref|XM_550510.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1116 Score = 335 bits (169), Expect = 8e-89 Identities = 286/325 (88%) Strand = Plus / Plus Query: 151 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 210 |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 73 gagagatgcccattcctgagaaacatcaatggagctacaacattttcattttcttctgct 132 Query: 211 ttgcctgtagctgcccggggaggcaagggtccgatctttgaggatggaccaggctttgag 270 ||||| ||||||||||| |||| ||||||||| || |||||||| |||||||||||||| Sbjct: 133 ttgccagtagctgcccgaggagccaagggtccaatttttgaggacggaccaggctttgat 192 Query: 271 tcggcattcaagcttttccatggacaggatgggatagtccccctttcaggaagatcatat 330 || ||||| || ||||||||||||| |||||| ||||| || |||||||||| |||||| Sbjct: 193 tcagcatttaaacttttccatggacgggatggaatagttccgctttcaggaaagtcatat 252 Query: 331 gtgcctgatgagaacggcagtgagagcactgatgtcaagcctgaacctgctctgcccttt 390 || |||||||||||| ||| |||||| ||||| ||||||||||||||||||||| ||| Sbjct: 253 gtacctgatgagaacaacagcgagagcgttgatgccaagcctgaacctgctctgccgttt 312 Query: 391 aatccattggctgctagagccgctaccataagtctatcatcatttggaccatttgggttc 450 || ||||||||||||||||| || || ||||||||||| ||||||| ||||| || || Sbjct: 313 aacccattggctgctagagctgccacaataagtctatctgcatttgggccattcggcttt 372 Query: 451 aacttctttaatgggcagggcaaaa 475 |||||||||||||| ||||||||| Sbjct: 373 aacttctttaatggcaagggcaaaa 397
>ref|XM_476693.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1700 Score = 309 bits (156), Expect = 4e-81 Identities = 336/396 (84%) Strand = Plus / Plus Query: 69 atcggcgaggatggaaatgctcttcagcagcctgttctgtgactcagcgtcatcggagaa 128 ||||||||||||||||||| ||||||||||| | | ||| || || ||||| ||||| Sbjct: 321 atcggcgaggatggaaatgttcttcagcagctttcttaatgaatcggcatcatcagagaa 380 Query: 129 cttttctggccatcccggtgttgagagatgcccattcctgaggaacatcaatggagccac 188 | | | ||| ||||| ||| |||||||||||||||||||| |||||||||||||| || Sbjct: 381 cctctttggtcatccaaatgtcgagagatgcccattcctgagaaacatcaatggagctac 440 Query: 189 aaccttttcattttcttctgctttgcctgtagctgcccggggaggcaagggtccgatctt 248 ||| | ||||||||||||||||||||| ||||||||||| ||||| || ||||| || || Sbjct: 441 aacatattcattttcttctgctttgccagtagctgcccgaggaggaaatggtccaatttt 500 Query: 249 tgaggatggaccaggctttgagtcggcattcaagcttttccatggacaggatgggatagt 308 |||||| |||||||||||||| || ||||| || |||||||||||| |||||| ||||| Sbjct: 501 tgaggacggaccaggctttgattcagcatttaaacttttccatggatgggatggaatagt 560 Query: 309 ccccctttcaggaagatcatatgtgcctgatgagaacggcagtgagagcactgatgtcaa 368 || |||||||||| |||||| | |||||||||| | ||||||||||| ||||| ||| Sbjct: 561 tccgctttcaggaaagtcatatttacctgatgagagcaacagtgagagcattgatgccaa 620 Query: 369 gcctgaacctgctctgccctttaatccattggctgctagagccgctaccataagtctatc 428 |||||||||||||||| ||||| ||||||||||||||||| || || ||||||||||| Sbjct: 621 tcctgaacctgctctgctgtttaacccattggctgctagagctgccacaataagtctatc 680 Query: 429 atcatttggaccatttgggttcaacttctttaatgg 464 ||||||| |||||||| || |||||||||||||| Sbjct: 681 tgcatttgggccatttggttttaacttctttaatgg 716
>dbj|AK065419.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021B09, full insert sequence Length = 1699 Score = 309 bits (156), Expect = 4e-81 Identities = 336/396 (84%) Strand = Plus / Plus Query: 69 atcggcgaggatggaaatgctcttcagcagcctgttctgtgactcagcgtcatcggagaa 128 ||||||||||||||||||| ||||||||||| | | ||| || || ||||| ||||| Sbjct: 320 atcggcgaggatggaaatgttcttcagcagctttcttaatgaatcggcatcatcagagaa 379 Query: 129 cttttctggccatcccggtgttgagagatgcccattcctgaggaacatcaatggagccac 188 | | | ||| ||||| ||| |||||||||||||||||||| |||||||||||||| || Sbjct: 380 cctctttggtcatccaaatgtcgagagatgcccattcctgagaaacatcaatggagctac 439 Query: 189 aaccttttcattttcttctgctttgcctgtagctgcccggggaggcaagggtccgatctt 248 ||| | ||||||||||||||||||||| ||||||||||| ||||| || ||||| || || Sbjct: 440 aacatattcattttcttctgctttgccagtagctgcccgaggaggaaatggtccaatttt 499 Query: 249 tgaggatggaccaggctttgagtcggcattcaagcttttccatggacaggatgggatagt 308 |||||| |||||||||||||| || ||||| || |||||||||||| |||||| ||||| Sbjct: 500 tgaggacggaccaggctttgattcagcatttaaacttttccatggatgggatggaatagt 559 Query: 309 ccccctttcaggaagatcatatgtgcctgatgagaacggcagtgagagcactgatgtcaa 368 || |||||||||| |||||| | |||||||||| | ||||||||||| ||||| ||| Sbjct: 560 tccgctttcaggaaagtcatatttacctgatgagagcaacagtgagagcattgatgccaa 619 Query: 369 gcctgaacctgctctgccctttaatccattggctgctagagccgctaccataagtctatc 428 |||||||||||||||| ||||| ||||||||||||||||| || || ||||||||||| Sbjct: 620 tcctgaacctgctctgctgtttaacccattggctgctagagctgccacaataagtctatc 679 Query: 429 atcatttggaccatttgggttcaacttctttaatgg 464 ||||||| |||||||| || |||||||||||||| Sbjct: 680 tgcatttgggccatttggttttaacttctttaatgg 715
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 224 bits (113), Expect = 2e-55 Identities = 218/253 (86%) Strand = Plus / Minus Query: 223 gcccggggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaag 282 ||||| |||| ||||||||| || |||||||| |||||||||||||| || ||||| || Sbjct: 877622 gcccgaggagccaagggtccaatttttgaggacggaccaggctttgattcagcatttaaa 877563 Query: 283 cttttccatggacaggatgggatagtccccctttcaggaagatcatatgtgcctgatgag 342 ||||||||||||| |||||| ||||| || |||||||||| |||||||| ||||||||| Sbjct: 877562 cttttccatggacgggatggaatagttccgctttcaggaaagtcatatgtacctgatgag 877503 Query: 343 aacggcagtgagagcactgatgtcaagcctgaacctgctctgccctttaatccattggct 402 ||| ||| |||||| ||||| ||||||||||||||||||||| ||||| ||||||||| Sbjct: 877502 aacaacagcgagagcgttgatgccaagcctgaacctgctctgccgtttaacccattggct 877443 Query: 403 gctagagccgctaccataagtctatcatcatttggaccatttgggttcaacttctttaat 462 |||||||| || || ||||||||||| ||||||| ||||| || || |||||||||||| Sbjct: 877442 gctagagctgccacaataagtctatctgcatttgggccattcggctttaacttctttaat 877383 Query: 463 gggcagggcaaaa 475 || ||||||||| Sbjct: 877382 ggcaagggcaaaa 877370 Score = 113 bits (57), Expect = 5e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 151 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 210 |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 877778 gagagatgcccattcctgagaaacatcaatggagctacaacattttcattttcttctgct 877719 Query: 211 ttgcctgtagctg 223 ||||| ||||||| Sbjct: 877718 ttgccagtagctg 877706
>emb|AJ315902.1|OSA315902 Oryza sativa DNA, clone F10 (C5) Length = 11618 Score = 224 bits (113), Expect = 2e-55 Identities = 218/253 (86%) Strand = Plus / Minus Query: 223 gcccggggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaag 282 ||||| |||| ||||||||| || |||||||| |||||||||||||| || ||||| || Sbjct: 9710 gcccgaggagccaagggtccaatttttgaggacggaccaggctttgattcagcatttaaa 9651 Query: 283 cttttccatggacaggatgggatagtccccctttcaggaagatcatatgtgcctgatgag 342 ||||||||||||| |||||| ||||| || |||||||||| |||||||| ||||||||| Sbjct: 9650 cttttccatggacgggatggaatagttccgctttcaggaaagtcatatgtacctgatgag 9591 Query: 343 aacggcagtgagagcactgatgtcaagcctgaacctgctctgccctttaatccattggct 402 ||| ||| |||||| ||||| ||||||||||||||||||||| ||||| ||||||||| Sbjct: 9590 aacaacagcgagagcgttgatgccaagcctgaacctgctctgccgtttaacccattggct 9531 Query: 403 gctagagccgctaccataagtctatcatcatttggaccatttgggttcaacttctttaat 462 |||||||| || || ||||||||||| ||||||| ||||| || || |||||||||||| Sbjct: 9530 gctagagctgccacaataagtctatctgcatttgggccattcggctttaacttctttaat 9471 Query: 463 gggcagggcaaaa 475 || ||||||||| Sbjct: 9470 ggcaagggcaaaa 9458 Score = 113 bits (57), Expect = 5e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 151 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 210 |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 9866 gagagatgcccattcctgagaaacatcaatggagctacaacattttcattttcttctgct 9807 Query: 211 ttgcctgtagctg 223 ||||| ||||||| Sbjct: 9806 ttgccagtagctg 9794
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019F11 Length = 123673 Score = 224 bits (113), Expect = 2e-55 Identities = 218/253 (86%) Strand = Plus / Minus Query: 223 gcccggggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaag 282 ||||| |||| ||||||||| || |||||||| |||||||||||||| || ||||| || Sbjct: 58517 gcccgaggagccaagggtccaatttttgaggacggaccaggctttgattcagcatttaaa 58458 Query: 283 cttttccatggacaggatgggatagtccccctttcaggaagatcatatgtgcctgatgag 342 ||||||||||||| |||||| ||||| || |||||||||| |||||||| ||||||||| Sbjct: 58457 cttttccatggacgggatggaatagttccgctttcaggaaagtcatatgtacctgatgag 58398 Query: 343 aacggcagtgagagcactgatgtcaagcctgaacctgctctgccctttaatccattggct 402 ||| ||| |||||| ||||| ||||||||||||||||||||| ||||| ||||||||| Sbjct: 58397 aacaacagcgagagcgttgatgccaagcctgaacctgctctgccgtttaacccattggct 58338 Query: 403 gctagagccgctaccataagtctatcatcatttggaccatttgggttcaacttctttaat 462 |||||||| || || ||||||||||| ||||||| ||||| || || |||||||||||| Sbjct: 58337 gctagagctgccacaataagtctatctgcatttgggccattcggctttaacttctttaat 58278 Query: 463 gggcagggcaaaa 475 || ||||||||| Sbjct: 58277 ggcaagggcaaaa 58265 Score = 113 bits (57), Expect = 5e-22 Identities = 69/73 (94%) Strand = Plus / Minus Query: 151 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 210 |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 58673 gagagatgcccattcctgagaaacatcaatggagctacaacattttcattttcttctgct 58614 Query: 211 ttgcctgtagctg 223 ||||| ||||||| Sbjct: 58613 ttgccagtagctg 58601
>dbj|AK069560.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023020P18, full insert sequence Length = 3418 Score = 224 bits (113), Expect = 2e-55 Identities = 218/253 (86%) Strand = Plus / Plus Query: 223 gcccggggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaag 282 ||||| |||| ||||||||| || |||||||| |||||||||||||| || ||||| || Sbjct: 1821 gcccgaggagccaagggtccaatttttgaggacggaccaggctttgattcagcatttaaa 1880 Query: 283 cttttccatggacaggatgggatagtccccctttcaggaagatcatatgtgcctgatgag 342 ||||||||||||| |||||| ||||| || |||||||||| |||||||| ||||||||| Sbjct: 1881 cttttccatggacgggatggaatagttccgctttcaggaaagtcatatgtacctgatgag 1940 Query: 343 aacggcagtgagagcactgatgtcaagcctgaacctgctctgccctttaatccattggct 402 ||| ||| |||||| ||||| ||||||||||||||||||||| ||||| ||||||||| Sbjct: 1941 aacaacagcgagagcgttgatgccaagcctgaacctgctctgccgtttaacccattggct 2000 Query: 403 gctagagccgctaccataagtctatcatcatttggaccatttgggttcaacttctttaat 462 |||||||| || || ||||||||||| ||||||| ||||| || || |||||||||||| Sbjct: 2001 gctagagctgccacaataagtctatctgcatttgggccattcggctttaacttctttaat 2060 Query: 463 gggcagggcaaaa 475 || ||||||||| Sbjct: 2061 ggcaagggcaaaa 2073 Score = 113 bits (57), Expect = 5e-22 Identities = 69/73 (94%) Strand = Plus / Plus Query: 151 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 210 |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||| Sbjct: 1665 gagagatgcccattcctgagaaacatcaatggagctacaacattttcattttcttctgct 1724 Query: 211 ttgcctgtagctg 223 ||||| ||||||| Sbjct: 1725 ttgccagtagctg 1737
>gb|BT017396.1| Zea mays clone EL01N0328C04.c mRNA sequence Length = 1249 Score = 194 bits (98), Expect = 2e-46 Identities = 161/182 (88%) Strand = Plus / Plus Query: 151 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 210 ||||||||||||||||||||||| ||||||||||| ||||||||||| | ||||||||| Sbjct: 873 gagagatgcccattcctgaggaatatcaatggagctacaaccttttccctctcttctgct 932 Query: 211 ttgcctgtagctgcccggggaggcaagggtccgatctttgaggatggaccaggctttgag 270 ||||| |||||||| | |||||||||||||| || |||||||| || ||||||||||| Sbjct: 933 ttgccagtagctgctcaaggaggcaagggtccaatttttgaggaagggtcaggctttgag 992 Query: 271 tcggcattcaagcttttccatggacaggatgggatagtccccctttcaggaagatcatat 330 || |||||||||||||||||||| | ||||| ||||| |||||||||| |||||||||| Sbjct: 993 tcagcattcaagcttttccatggtcgagatggaatagttcccctttcagaaagatcatat 1052 Query: 331 gt 332 || Sbjct: 1053 gt 1054
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 194 bits (98), Expect = 2e-46 Identities = 206/242 (85%) Strand = Plus / Minus Query: 223 gcccggggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaag 282 ||||| ||||| || ||||| || |||||||| |||||||||||||| || ||||| || Sbjct: 3217112 gcccgaggaggaaatggtccaatttttgaggacggaccaggctttgattcagcatttaaa 3217053 Query: 283 cttttccatggacaggatgggatagtccccctttcaggaagatcatatgtgcctgatgag 342 |||||||||||| |||||| ||||| || |||||||||| |||||| | ||||||||| Sbjct: 3217052 cttttccatggatgggatggaatagttccgctttcaggaaagtcatatttacctgatgag 3216993 Query: 343 aacggcagtgagagcactgatgtcaagcctgaacctgctctgccctttaatccattggct 402 | | ||||||||||| ||||| ||| |||||||||||||||| ||||| ||||||||| Sbjct: 3216992 agcaacagtgagagcattgatgccaatcctgaacctgctctgctgtttaacccattggct 3216933 Query: 403 gctagagccgctaccataagtctatcatcatttggaccatttgggttcaacttctttaat 462 |||||||| || || ||||||||||| ||||||| |||||||| || |||||||||||| Sbjct: 3216932 gctagagctgccacaataagtctatctgcatttgggccatttggttttaacttctttaat 3216873 Query: 463 gg 464 || Sbjct: 3216872 gg 3216871 Score = 105 bits (53), Expect = 1e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 151 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 210 |||||||||||||||||||| |||||||||||||| ||||| | |||||||||||||||| Sbjct: 3217268 gagagatgcccattcctgagaaacatcaatggagctacaacatattcattttcttctgct 3217209 Query: 211 ttgcctgtagctg 223 ||||| ||||||| Sbjct: 3217208 ttgccagtagctg 3217196
>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0455F03 Length = 158201 Score = 194 bits (98), Expect = 2e-46 Identities = 206/242 (85%) Strand = Plus / Minus Query: 223 gcccggggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaag 282 ||||| ||||| || ||||| || |||||||| |||||||||||||| || ||||| || Sbjct: 132102 gcccgaggaggaaatggtccaatttttgaggacggaccaggctttgattcagcatttaaa 132043 Query: 283 cttttccatggacaggatgggatagtccccctttcaggaagatcatatgtgcctgatgag 342 |||||||||||| |||||| ||||| || |||||||||| |||||| | ||||||||| Sbjct: 132042 cttttccatggatgggatggaatagttccgctttcaggaaagtcatatttacctgatgag 131983 Query: 343 aacggcagtgagagcactgatgtcaagcctgaacctgctctgccctttaatccattggct 402 | | ||||||||||| ||||| ||| |||||||||||||||| ||||| ||||||||| Sbjct: 131982 agcaacagtgagagcattgatgccaatcctgaacctgctctgctgtttaacccattggct 131923 Query: 403 gctagagccgctaccataagtctatcatcatttggaccatttgggttcaacttctttaat 462 |||||||| || || ||||||||||| ||||||| |||||||| || |||||||||||| Sbjct: 131922 gctagagctgccacaataagtctatctgcatttgggccatttggttttaacttctttaat 131863 Query: 463 gg 464 || Sbjct: 131862 gg 131861 Score = 105 bits (53), Expect = 1e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 151 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 210 |||||||||||||||||||| |||||||||||||| ||||| | |||||||||||||||| Sbjct: 132258 gagagatgcccattcctgagaaacatcaatggagctacaacatattcattttcttctgct 132199 Query: 211 ttgcctgtagctg 223 ||||| ||||||| Sbjct: 132198 ttgccagtagctg 132186
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 194 bits (98), Expect = 2e-46 Identities = 206/242 (85%) Strand = Plus / Minus Query: 223 gcccggggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaag 282 ||||| ||||| || ||||| || |||||||| |||||||||||||| || ||||| || Sbjct: 26805 gcccgaggaggaaatggtccaatttttgaggacggaccaggctttgattcagcatttaaa 26746 Query: 283 cttttccatggacaggatgggatagtccccctttcaggaagatcatatgtgcctgatgag 342 |||||||||||| |||||| ||||| || |||||||||| |||||| | ||||||||| Sbjct: 26745 cttttccatggatgggatggaatagttccgctttcaggaaagtcatatttacctgatgag 26686 Query: 343 aacggcagtgagagcactgatgtcaagcctgaacctgctctgccctttaatccattggct 402 | | ||||||||||| ||||| ||| |||||||||||||||| ||||| ||||||||| Sbjct: 26685 agcaacagtgagagcattgatgccaatcctgaacctgctctgctgtttaacccattggct 26626 Query: 403 gctagagccgctaccataagtctatcatcatttggaccatttgggttcaacttctttaat 462 |||||||| || || ||||||||||| ||||||| |||||||| || |||||||||||| Sbjct: 26625 gctagagctgccacaataagtctatctgcatttgggccatttggttttaacttctttaat 26566 Query: 463 gg 464 || Sbjct: 26565 gg 26564 Score = 105 bits (53), Expect = 1e-19 Identities = 68/73 (93%) Strand = Plus / Minus Query: 151 gagagatgcccattcctgaggaacatcaatggagccacaaccttttcattttcttctgct 210 |||||||||||||||||||| |||||||||||||| ||||| | |||||||||||||||| Sbjct: 26961 gagagatgcccattcctgagaaacatcaatggagctacaacatattcattttcttctgct 26902 Query: 211 ttgcctgtagctg 223 ||||| ||||||| Sbjct: 26901 ttgccagtagctg 26889
>gb|AC157776.1| Zea mays chromosome 8 BAC clone ZMMBBb0483G05, complete sequence Length = 147470 Score = 153 bits (77), Expect = 6e-34 Identities = 162/189 (85%), Gaps = 1/189 (0%) Strand = Plus / Plus Query: 154 agatgcccattcctgaggaacatcaatggagccacaaccttttcatttt-cttctgcttt 212 |||||||||||| ||||||| ||||||||||| ||||||||||| | |||||||||| Sbjct: 32847 agatgcccattcgtgaggaatatcaatggagctacaaccttttcccctcacttctgcttt 32906 Query: 213 gcctgtagctgcccggggaggcaagggtccgatctttgaggatggaccaggctttgagtc 272 ||| |||||||| | |||||||||||||| || |||||||| || ||||||||||||| Sbjct: 32907 gccagtagctgctcaaggaggcaagggtccaatttttgaggaagggtcaggctttgagtc 32966 Query: 273 ggcattcaagcttttccatggacaggatgggatagtccccctttcaggaagatcatatgt 332 ||||||||||||||| |||| | ||||| ||||||||||||| || |||||||||||| Sbjct: 32967 agcattcaagcttttctatggccgagatggaatagtccccctttaagaaagatcatatgt 33026 Query: 333 gcctgatga 341 ||||||| Sbjct: 33027 atctgatga 33035
>dbj|AK062240.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-E07, full insert sequence Length = 1116 Score = 119 bits (60), Expect = 9e-24 Identities = 102/116 (87%) Strand = Plus / Plus Query: 360 tgatgtcaagcctgaacctgctctgccctttaatccattggctgctagagccgctaccat 419 ||||| ||||||||||||||||||||| ||||| ||||||||||||||||| || || || Sbjct: 18 tgatgccaagcctgaacctgctctgccgtttaacccattggctgctagagctgccacaat 77 Query: 420 aagtctatcatcatttggaccatttgggttcaacttctttaatgggcagggcaaaa 475 ||||||||| ||||||| ||||| || || |||||||||||||| ||||||||| Sbjct: 78 aagtctatctgcatttgggccattcggctttaacttctttaatggcaagggcaaaa 133
>ref|NM_197931.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0056G17.7), mRNA Length = 1251 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 149 ttgagagatgcccattcctgaggaacatcaatg 181 |||| |||||||||||||| ||||||||||||| Sbjct: 151 ttgaaagatgcccattcctaaggaacatcaatg 183
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 149 ttgagagatgcccattcctgaggaacatcaatg 181 |||| |||||||||||||| ||||||||||||| Sbjct: 128332 ttgaaagatgcccattcctaaggaacatcaatg 128300
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 149 ttgagagatgcccattcctgaggaacatcaatg 181 |||| |||||||||||||| ||||||||||||| Sbjct: 22673663 ttgaaagatgcccattcctaaggaacatcaatg 22673631
>dbj|AK104136.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F07, full insert sequence Length = 1281 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 149 ttgagagatgcccattcctgaggaacatcaatg 181 |||| |||||||||||||| ||||||||||||| Sbjct: 196 ttgaaagatgcccattcctaaggaacatcaatg 228
>dbj|AK072734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141G14, full insert sequence Length = 1357 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 149 ttgagagatgcccattcctgaggaacatcaatg 181 |||| |||||||||||||| ||||||||||||| Sbjct: 218 ttgaaagatgcccattcctaaggaacatcaatg 250
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 149 ttgagagatgcccattcctgaggaacatcaatg 181 |||| |||||||||||||| ||||||||||||| Sbjct: 22686131 ttgaaagatgcccattcctaaggaacatcaatg 22686099
>ref|NM_119158.2| Arabidopsis thaliana HMA3; ATPase, coupled to transmembrane movement of ions, phosphorylative mechanism AT4G30120 (HMA3) mRNA, complete cds Length = 2282 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 349 agtgagagcactgatgtcaagcctgaacct 378 ||||||||| ||||||||||||||||||| Sbjct: 450 agtgagagcgttgatgtcaagcctgaacct 421
>ref|XM_473321.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 ctcctctcccccaccccaccgcacgg 35 ||||||||||||||| |||||||||| Sbjct: 271 ctcctctcccccacctcaccgcacgg 296
>gb|BC030641.1| Homo sapiens motile sperm domain containing 2, mRNA (cDNA clone MGC:26706 IMAGE:4821861), complete cds Length = 3189 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 188 caaccttttcattttcttctgctttg 213 |||| ||||||||||||||||||||| Sbjct: 1019 caactttttcattttcttctgctttg 994
>gb|AY434730.1| Arabidopsis thaliana ecotype Columbia potential Zn/Cd heavy metal transporter (HMA3) pseudogene mRNA, complete cds Length = 2307 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 349 agtgagagcactgatgtcaagcctgaacct 378 ||||||||| ||||||||||||||||||| Sbjct: 461 agtgagagcgttgatgtcaagcctgaacct 432
>gb|AY434729.1| Arabidopsis thaliana ecotype Wassilewskija potential Zn/Cd heavy metal transporter (HMA3) mRNA, complete cds Length = 2308 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 349 agtgagagcactgatgtcaagcctgaacct 378 ||||||||| ||||||||||||||||||| Sbjct: 461 agtgagagcgttgatgtcaagcctgaacct 432
>gb|AY055217.1| Arabidopsis thaliana putative heavy metal transporter HMA3 mRNA, complete cds Length = 2283 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 349 agtgagagcactgatgtcaagcctgaacct 378 ||||||||| ||||||||||||||||||| Sbjct: 450 agtgagagcgttgatgtcaagcctgaacct 421
>ref|XM_548867.2| PREDICTED: Canis familiaris similar to motile sperm domain containing 2 (LOC491747), mRNA Length = 1713 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 188 caaccttttcattttcttctgctttg 213 ||||||||||||||||||| |||||| Sbjct: 1084 caaccttttcattttcttcagctttg 1059
>gb|AC125375.3| Mus musculus BAC clone RP23-464K21 from chromosome 14, complete sequence Length = 198193 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 447 gttcaacttctttaatgggcag 468 |||||||||||||||||||||| Sbjct: 16885 gttcaacttctttaatgggcag 16864
>gb|AC125058.4| Mus musculus BAC clone RP23-400N6 from chromosome 14, complete sequence Length = 195696 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 447 gttcaacttctttaatgggcag 468 |||||||||||||||||||||| Sbjct: 177415 gttcaacttctttaatgggcag 177394
>ref|XM_541331.2| PREDICTED: Canis familiaris similar to chromosome 9 open reading frame 12 (LOC484215), mRNA Length = 2079 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 14 tctcccccaccccaccgcacgg 35 |||||||||||||||||||||| Sbjct: 156 tctcccccaccccaccgcacgg 177
>gb|DQ446885.1| Arabidopsis thaliana clone pENTR221-At4g30120 ATPase E1-E2 type family protein/heavy-metal-associated domain-containing protein (At4g30120) mRNA, complete cds Length = 1629 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Minus Query: 349 agtgagagcactgatgtcaagcctgaacct 378 ||||||||| ||||||||||||||||||| Sbjct: 450 agtgagagcgttgatgtcaagcctgaacct 421
>emb|AL662998.4|OSJN00196 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0020O11, complete sequence Length = 113677 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 ctcctctcccccaccccaccgcacgg 35 ||||||||||||||| |||||||||| Sbjct: 10044 ctcctctcccccacctcaccgcacgg 10069
>emb|AL161576.2|ATCHRIV72 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 72 Length = 198924 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 349 agtgagagcactgatgtcaagcctgaacct 378 ||||||||| ||||||||||||||||||| Sbjct: 72556 agtgagagcgttgatgtcaagcctgaacct 72585
>emb|AL078464.1|ATF6G3 Arabidopsis thaliana DNA chromosome 4, BAC clone F6G3 (ESSA project) Length = 93953 Score = 44.1 bits (22), Expect = 0.41 Identities = 28/30 (93%) Strand = Plus / Plus Query: 349 agtgagagcactgatgtcaagcctgaacct 378 ||||||||| ||||||||||||||||||| Sbjct: 69727 agtgagagcgttgatgtcaagcctgaacct 69756
>emb|AL606525.7| Mouse DNA sequence from clone RP23-235J20 on chromosome 13 Contains five novel genes and a CpG island, complete sequence Length = 187348 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 9 actcctctcccccaccccaccg 30 |||||||||||||||||||||| Sbjct: 120608 actcctctcccccaccccaccg 120629
>gb|AC121340.4| Homo sapiens X BAC RP13-928P6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 125285 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 188 caaccttttcattttcttctgctttg 213 |||| ||||||||||||||||||||| Sbjct: 31705 caactttttcattttcttctgctttg 31680
>ref|NM_152581.1| Homo sapiens motile sperm domain containing 2 (MOSPD2), mRNA Length = 3189 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 188 caaccttttcattttcttctgctttg 213 |||| ||||||||||||||||||||| Sbjct: 1019 caactttttcattttcttctgctttg 994
>emb|CR615328.1| full-length cDNA clone CS0DI021YN05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1792 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 188 caaccttttcattttcttctgctttg 213 |||| ||||||||||||||||||||| Sbjct: 1016 caactttttcattttcttctgctttg 991
>dbj|AK093075.1| Homo sapiens cDNA FLJ35756 fis, clone TESTI2004687 Length = 1820 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 188 caaccttttcattttcttctgctttg 213 |||| ||||||||||||||||||||| Sbjct: 1016 caactttttcattttcttctgctttg 991
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 10 ctcctctcccccaccccaccgcacgg 35 ||||||||||||||| |||||||||| Sbjct: 26773151 ctcctctcccccacctcaccgcacgg 26773126
>gb|AC140846.3| Homo sapiens X PAC RP1-93D11 (Roswell Park Cancer Institute Human PAC Library) complete sequence Length = 152761 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 188 caaccttttcattttcttctgctttg 213 |||| ||||||||||||||||||||| Sbjct: 71823 caactttttcattttcttctgctttg 71798
>dbj|AK070205.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042I23, full insert sequence Length = 1301 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 10 ctcctctcccccaccccaccgcacgg 35 ||||||||||||||| |||||||||| Sbjct: 417 ctcctctcccccacctcaccgcacgg 442
>gb|AC102601.8| Mus musculus chromosome 1, clone RP23-379D23, complete sequence Length = 181908 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 198 attttcttctgctttgcctgta 219 |||||||||||||||||||||| Sbjct: 121212 attttcttctgctttgcctgta 121233
>emb|AL834345.1|HSM805405 Homo sapiens mRNA; cDNA DKFZp761K0315 (from clone DKFZp761K0315) Length = 3273 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Minus Query: 188 caaccttttcattttcttctgctttg 213 |||| ||||||||||||||||||||| Sbjct: 104 caactttttcattttcttctgctttg 79
>ref|NM_148091.2| Arabidopsis thaliana unknown protein AT5G45410 transcript variant AT5G45410.2 mRNA, complete cds Length = 1343 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 229 ggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaagcttttc 288 ||||| || ||||| || ||||| ||||| || || ||||| || ||||||||||| ||| Sbjct: 272 ggaggtaaaggtcctatttttgaagatggtcctggatttgattcagcattcaagctcttc 331 Query: 289 catgg 293 ||||| Sbjct: 332 catgg 336
>ref|NM_123909.3| Arabidopsis thaliana unknown protein AT5G45410 transcript variant AT5G45410.1 mRNA, complete cds Length = 1270 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 229 ggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaagcttttc 288 ||||| || ||||| || ||||| ||||| || || ||||| || ||||||||||| ||| Sbjct: 199 ggaggtaaaggtcctatttttgaagatggtcctggatttgattcagcattcaagctcttc 258 Query: 289 catgg 293 ||||| Sbjct: 259 catgg 263
>gb|AC127376.3| Mus musculus BAC clone RP23-49A4 from chromosome 6, complete sequence Length = 204528 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 454 ttctttaatgggcagggcaaa 474 ||||||||||||||||||||| Sbjct: 176753 ttctttaatgggcagggcaaa 176773
>gb|AY050908.1| Arabidopsis thaliana unknown protein (At5g45410) mRNA, partial cds Length = 1180 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 229 ggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaagcttttc 288 ||||| || ||||| || ||||| ||||| || || ||||| || ||||||||||| ||| Sbjct: 90 ggaggtaaaggtcctatttttgaagatggtcctggatttgattcagcattcaagctcttc 149 Query: 289 catgg 293 ||||| Sbjct: 150 catgg 154
>gb|AC067942.6| Homo sapiens BAC clone RP11-791G16 from 4, complete sequence Length = 187399 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 ctcctctcccccaccccaccgcacg 34 |||||||||||||||||||| |||| Sbjct: 163890 ctcctctcccccaccccacctcacg 163866
>gb|AC026469.8| Homo sapiens chromosome 16 clone RP11-442O1, complete sequence Length = 199669 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 tcattttcttctgctttgcct 216 ||||||||||||||||||||| Sbjct: 150602 tcattttcttctgctttgcct 150622
>emb|BX832539.1|CNS0A173 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH79ZH10 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1219 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 229 ggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaagcttttc 288 ||||| || ||||| || ||||| ||||| || || ||||| || ||||||||||| ||| Sbjct: 183 ggaggtaaaggtcctatttttgaagatggtcctggatttgattcagcattcaagctcttc 242 Query: 289 catgg 293 ||||| Sbjct: 243 catgg 247
>gb|AC092341.5| Homo sapiens chromosome 16 clone RP11-260K13, complete sequence Length = 180623 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 tcattttcttctgctttgcct 216 ||||||||||||||||||||| Sbjct: 24280 tcattttcttctgctttgcct 24300
>emb|BX830764.1|CNS0A0TA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZF06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1233 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 229 ggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaagcttttc 288 ||||| || ||||| || ||||| ||||| || || ||||| || ||||||||||| ||| Sbjct: 175 ggaggtaaaggtcctatttttgaagatggtcctggatttgattcagcattcaagctcttc 234 Query: 289 catgg 293 ||||| Sbjct: 235 catgg 239
>gb|AY088538.1| Arabidopsis thaliana clone 767 mRNA, complete sequence Length = 1275 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 229 ggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaagcttttc 288 ||||| || ||||| || ||||| ||||| || || ||||| || ||||||||||| ||| Sbjct: 201 ggaggtaaaggtcctatttttgaagatggtcctggatttgattcagcattcaagctcttc 260 Query: 289 catgg 293 ||||| Sbjct: 261 catgg 265
>gb|BT002755.1| Arabidopsis thaliana clone C104940 unknown protein (At5g45410) mRNA, complete cds Length = 1060 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 229 ggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaagcttttc 288 ||||| || ||||| || ||||| ||||| || || ||||| || ||||||||||| ||| Sbjct: 121 ggaggtaaaggtcctatttttgaagatggtcctggatttgattcagcattcaagctcttc 180 Query: 289 catgg 293 ||||| Sbjct: 181 catgg 185
>dbj|AB018113.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC19 Length = 85020 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Minus Query: 229 ggaggcaagggtccgatctttgaggatggaccaggctttgagtcggcattcaagcttttc 288 ||||| || ||||| || ||||| ||||| || || ||||| || ||||||||||| ||| Sbjct: 22475 ggaggtaaaggtcctatttttgaagatggtcctggatttgattcagcattcaagctcttc 22416 Query: 289 catgg 293 ||||| Sbjct: 22415 catgg 22411
>gb|AC124585.3| Mus musculus BAC clone RP23-130P17 from chromosome 10, complete sequence Length = 198030 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 ggcattcaagcttttccatg 292 |||||||||||||||||||| Sbjct: 88985 ggcattcaagcttttccatg 89004
>gb|AC124404.4| Mus musculus BAC clone RP24-371M10 from chromosome 12, complete sequence Length = 150375 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 cacaaccttttcattttcttctgc 209 |||| ||||||||||||||||||| Sbjct: 84943 cacagccttttcattttcttctgc 84966
>gb|AC121605.3| Mus musculus BAC clone RP23-312E16 from 1, complete sequence Length = 196494 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cacaaccttttcattttctt 205 |||||||||||||||||||| Sbjct: 171061 cacaaccttttcattttctt 171080
>gb|AC117216.3| Mus musculus BAC clone RP23-310O5 from 2, complete sequence Length = 184628 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ttttcattttcttctgcttt 212 |||||||||||||||||||| Sbjct: 53847 ttttcattttcttctgcttt 53828
>gb|AC087900.19| Mus musculus strain C57BL/6J clone rp23-171i6 map 19, complete sequence Length = 195066 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cagtgagagcactgatgtca 367 |||||||||||||||||||| Sbjct: 68478 cagtgagagcactgatgtca 68459
>gb|AC159100.2| Mus musculus BAC clone RP24-248F9 from chromosome 9, complete sequence Length = 161485 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ttttcattttcttctgcttt 212 |||||||||||||||||||| Sbjct: 121279 ttttcattttcttctgcttt 121260
>gb|AC159096.2| Mus musculus chromosome 1, clone RP24-95N15, complete sequence Length = 189668 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 186 cacaaccttttcattttctt 205 |||||||||||||||||||| Sbjct: 7618 cacaaccttttcattttctt 7599
>emb|X54106.1|PHADH1 P.hybrida ADH1 gene for alcohol dehydrogenase 1 Length = 4672 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 acaaccttttcattttcttc 206 |||||||||||||||||||| Sbjct: 492 acaaccttttcattttcttc 473
>gb|AC163296.2| Mus musculus BAC clone RP23-135F1 from chromosome 12, complete sequence Length = 226483 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 cacaaccttttcattttcttctgc 209 |||| ||||||||||||||||||| Sbjct: 54605 cacagccttttcattttcttctgc 54628
>emb|CR932808.1| Mus musculus chromosome 2, clone RPCI-21-370D12 strain 129/Sv, complete sequence Length = 163435 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctcctctcccccaccccacc 29 |||||||||||||||||||| Sbjct: 35722 ctcctctcccccaccccacc 35741
>emb|CR932798.1| Mus musculus chromosome 2, clone RPCI-21-15D06 strain 129/Sv, complete sequence Length = 165525 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctcctctcccccaccccacc 29 |||||||||||||||||||| Sbjct: 118401 ctcctctcccccaccccacc 118420
>gb|AC159939.3| Loxodonta africana clone VMRC15-235M14, complete sequence Length = 144550 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 cctctcccccaccccaccgc 31 |||||||||||||||||||| Sbjct: 37614 cctctcccccaccccaccgc 37633
>gb|AC183098.3| Mus musculus BAC clone CH25-385D19 from chromosome 6, complete sequence Length = 101511 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ttttcattttcttctgcttt 212 |||||||||||||||||||| Sbjct: 92130 ttttcattttcttctgcttt 92149
>ref|XM_695565.1| PREDICTED: Danio rerio similar to LOC443704 protein (LOC571919), mRNA Length = 3909 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 205 tctgctttgcctgtagctgc 224 |||||||||||||||||||| Sbjct: 3565 tctgctttgcctgtagctgc 3546
>ref|XM_944613.1| PREDICTED: Homo sapiens hypothetical protein LOC651344 (LOC651344), mRNA Length = 740 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 ggacggaagcaggcaggcgagcag 57 ||||||| |||||||||||||||| Sbjct: 3 ggacggaggcaggcaggcgagcag 26
>ref|XM_929051.1| PREDICTED: Homo sapiens hypothetical protein LOC646089 (LOC646089), mRNA Length = 740 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 ggacggaagcaggcaggcgagcag 57 ||||||| |||||||||||||||| Sbjct: 3 ggacggaggcaggcaggcgagcag 26
>gb|AC093260.2| Homo sapiens chromosome 5 clone RP11-237B16, complete sequence Length = 168521 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ttttcattttcttctgcttt 212 |||||||||||||||||||| Sbjct: 78623 ttttcattttcttctgcttt 78604
>gb|AC160393.2| Mus musculus BAC clone RP23-136M3 from chromosome 12, complete sequence Length = 215692 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctcctctcccccaccccacc 29 |||||||||||||||||||| Sbjct: 184695 ctcctctcccccaccccacc 184714
>gb|AC158682.8| Mus musculus 6 BAC RP23-342D13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214029 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 cttttcattttcttctgctt 211 |||||||||||||||||||| Sbjct: 43959 cttttcattttcttctgctt 43978
>gb|AC008945.6|AC008945 Homo sapiens chromosome 5 clone CTD-2325A15, complete sequence Length = 193254 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 ttttcattttcttctgcttt 212 |||||||||||||||||||| Sbjct: 172203 ttttcattttcttctgcttt 172222
>gb|M97181.1|SCOMEPAYZ4 Schizophyllum commune metalloendopeptidase (MEP) gene, partial cds; and A-alphaZ4 protein (A-alphaZ4) and A-alpha-Y4 protein (A-alphaY4) genes, complete cds Length = 8542 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 gcaggcaggcgagcagctct 61 |||||||||||||||||||| Sbjct: 5049 gcaggcaggcgagcagctct 5030
>gb|AC104753.10| Mus musculus chromosome 7, clone RP24-168P9, complete sequence Length = 183931 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctcctctcccccaccccacc 29 |||||||||||||||||||| Sbjct: 135218 ctcctctcccccaccccacc 135237
>gb|AC113368.3| Homo sapiens chromosome 5 clone RP11-116B13, complete sequence Length = 155354 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ttttcattttcttctgcttt 212 |||||||||||||||||||| Sbjct: 100125 ttttcattttcttctgcttt 100106
>gb|AC136365.5| Homo sapiens chromosome 8, clone RP11-97P4, complete sequence Length = 143756 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 attcctgaggaacatcaatg 181 |||||||||||||||||||| Sbjct: 8889 attcctgaggaacatcaatg 8870
>emb|AL928902.16| Mouse DNA sequence from clone RP24-221D3 on chromosome 2, complete sequence Length = 167573 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 76 aggatggaaatgctcttcagcagcctgt 103 |||||||||||||| |||||||| |||| Sbjct: 22195 aggatggaaatgctgttcagcagtctgt 22222
>emb|AJ330030.1|HSA330030 Homo sapiens genomic sequence surrounding NotI site, clone NR1-WF4R Length = 715 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 34 ggacggaagcaggcaggcgagcag 57 ||||||| |||||||||||||||| Sbjct: 222 ggacggaggcaggcaggcgagcag 245
>emb|AJ327068.1|HSA327068 Homo sapiens genomic sequence surrounding NotI site, clone NL1-YJ5R Length = 757 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctcctctcccccaccccacc 29 |||||||||||||||||||| Sbjct: 706 ctcctctcccccaccccacc 687
>gb|AC101703.11| Mus musculus chromosome 1, clone RP23-248B15, complete sequence Length = 208984 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 186 cacaaccttttcattttctt 205 |||||||||||||||||||| Sbjct: 753 cacaaccttttcattttctt 772
>gb|AC122193.5| Mus musculus BAC clone RP23-45G16 from 6, complete sequence Length = 211512 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctcctctcccccaccccacc 29 |||||||||||||||||||| Sbjct: 55310 ctcctctcccccaccccacc 55291
>gb|AC151976.3| Mus musculus BAC clone RP24-446O20 from 10, complete sequence Length = 174449 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 ggcattcaagcttttccatg 292 |||||||||||||||||||| Sbjct: 156444 ggcattcaagcttttccatg 156463
>gb|AC153931.2| Mus musculus 10 BAC RP24-147A18 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 172260 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 cattttcttctgctttgcct 216 |||||||||||||||||||| Sbjct: 87564 cattttcttctgctttgcct 87545
>gb|CP000009.1| Gluconobacter oxydans 621H, complete genome Length = 2702173 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ggaagcaggcaggcgagcag 57 |||||||||||||||||||| Sbjct: 1719503 ggaagcaggcaggcgagcag 1719522
>dbj|AP001838.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-718B20, complete sequences Length = 211652 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 ggacggaagcaggcaggcgagcag 57 ||||||| |||||||||||||||| Sbjct: 163880 ggacggaggcaggcaggcgagcag 163857
>dbj|AP001360.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831A10, complete sequence Length = 190766 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctcctctcccccaccccacc 29 |||||||||||||||||||| Sbjct: 126117 ctcctctcccccaccccacc 126136
>dbj|AP005902.2| Homo sapiens genomic DNA, chromosome 8p11.21, clone: KB1582A10, complete sequence Length = 149577 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 attcctgaggaacatcaatg 181 |||||||||||||||||||| Sbjct: 87216 attcctgaggaacatcaatg 87235
>emb|CT030181.13| Mouse DNA sequence from clone RP23-115A18 on chromosome 9, complete sequence Length = 281479 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ttttcattttcttctgcttt 212 |||||||||||||||||||| Sbjct: 65928 ttttcattttcttctgcttt 65909
>gb|AC005381.1|AC005381 Homo sapiens chromosome 19, cosmid F19926, complete sequence Length = 41378 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 tttcattttcttctgctttg 213 |||||||||||||||||||| Sbjct: 39553 tttcattttcttctgctttg 39534
>gb|AC153654.4| Mus musculus BAC clone RP23-457N11 from chromosome 12, complete sequence Length = 193547 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 186 cacaaccttttcattttcttctgc 209 |||| ||||||||||||||||||| Sbjct: 174181 cacagccttttcattttcttctgc 174204
>emb|AL772407.4| Mouse DNA sequence from clone RP23-112N9 on chromosome 2, complete sequence Length = 202231 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 ttttcattttcttctgcttt 212 |||||||||||||||||||| Sbjct: 120761 ttttcattttcttctgcttt 120742
>emb|AL844538.9| Mouse DNA sequence from clone RP23-289K19 on chromosome 2, complete sequence Length = 180252 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 ctcctctcccccaccccacc 29 |||||||||||||||||||| Sbjct: 86217 ctcctctcccccaccccacc 86198
>emb|AL731831.17| Mouse DNA sequence from clone RP23-105O13 on chromosome 2, complete sequence Length = 218818 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 ctcctctcccccaccccacc 29 |||||||||||||||||||| Sbjct: 181437 ctcctctcccccaccccacc 181456 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,761,922 Number of Sequences: 3902068 Number of extensions: 4761922 Number of successful extensions: 102893 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 97 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 102596 Number of HSP's gapped (non-prelim): 296 length of query: 475 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 453 effective length of database: 17,147,199,772 effective search space: 7767681496716 effective search space used: 7767681496716 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)