ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet67c07 |
|---|---|
| Clone Library Name | barley_pub |
>C86A1_ARATH (P48422) Cytochrome P450 86A1 (EC 1.14.-.-) (CYPLXXXVI)| (P450-dependent fatty acid omega-hydroxylase) Length = 513 Score = 60.1 bits (144), Expect = 1e-09 Identities = 39/108 (36%), Positives = 53/108 (49%), Gaps = 6/108 (5%) Frame = +2 Query: 17 YLRSSRSKGPAVLPTNWPIVGVLPSLVANLHNLHDYLAVVLAGSGHNFRATGPP----GT 184 Y S R GP VLP VG LP L+AN +HD++A L +G ++ Sbjct: 24 YFLSRRLTGPKVLP----FVGSLPYLIANRSRIHDWIADNLRATGGTYQTCTMVIPFVAK 79 Query: 185 GMRFF-VTCDPANVRHIFTSNHANFPKGAEFAAIF-DIAGGSFFTTEG 322 F+ VTC P NV HI + N+PKG + A F D+ G F ++G Sbjct: 80 AQGFYTVTCHPKNVEHILKTRFDNYPKGPMWRAAFHDLLGQGIFNSDG 127
>C86A2_ARATH (O23066) Cytochrome P450 86A2 (EC 1.14.-.-)| Length = 553 Score = 57.4 bits (137), Expect = 9e-09 Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 6/101 (5%) Frame = +2 Query: 38 KGPAVLPTNWPIVGVLPSLVANLHNLHDYLAVVLAGSGHNFRAT--GPPGTGMR---FFV 202 KGP V WP++G LP L+ +HD++ L G ++ P + V Sbjct: 28 KGPRV----WPVLGSLPGLIEQRDRMHDWITENLRACGGTYQTCICAVPFLAKKQGLVTV 83 Query: 203 TCDPANVRHIFTSNHANFPKGAEFAAIF-DIAGGSFFTTEG 322 TCDP N+ H+ + N+PKG + A+F D G F ++G Sbjct: 84 TCDPKNIEHMLKTRFDNYPKGPTWQAVFHDFLGQGIFNSDG 124
>C94A1_VICSA (O81117) Cytochrome P450 94A1 (EC 1.14.-.-) (P450-dependent fatty| acid omega-hydroxylase) Length = 514 Score = 45.8 bits (107), Expect = 3e-05 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 2/101 (1%) Frame = +2 Query: 26 SSRSKGPAVLPTNWPIVGVLPSLVANLHNLHDYLA-VVLAGSGHNFRATGPPGTGMRFFV 202 +S + LP ++P++G S NLH +L+ +V F+ G G R + Sbjct: 38 TSTNNNIITLPKSYPLIGSYLSFRKNLHRRIQWLSDIVQISPSATFQLDGT--LGKRQII 95 Query: 203 TCDPANVRHIFTSNHANFPKGAEFA-AIFDIAGGSFFTTEG 322 T +P+ V+HI + +N+ KG F + D G F T G Sbjct: 96 TGNPSTVQHILKNQFSNYQKGTTFTNTLSDFLGTGIFNTNG 136
>C94A2_VICSA (P98188) Cytochrome P450 94A2 (EC 1.14.-.-) (P450-dependent fatty| acid omega-hydroxylase) Length = 513 Score = 39.7 bits (91), Expect = 0.002 Identities = 32/116 (27%), Positives = 48/116 (41%), Gaps = 9/116 (7%) Frame = +2 Query: 2 FMYTLYLRSSRSKGPAV--------LPTNWPIVGVLPSLVANLHNLHDYLAVVLAGSGHN 157 F + ++SK P +P ++PI G SL+AN H + + +L + Sbjct: 17 FWFLFLATKTKSKPPKTPSSTTNTPIPKSYPIFGSAFSLLANFHRRIQWTSDILQTIPSS 76 Query: 158 FRATGPPGTGMRFFVTCDPANVRHIFTSNHANFPKGAEF-AAIFDIAGGSFFTTEG 322 P G R T PA V+HI +N + KG F +I D G F +G Sbjct: 77 TFVLHRP-FGARQVFTAQPAVVQHILRTNFTCYGKGLTFYQSINDFLGDGIFNADG 131
>CP52D_CANMA (P16141) Cytochrome P450 52A4 (EC 1.14.14.-) (CYPLIIA4)| (Alkane-inducible P450-ALK3-A) (P450-CM2) Length = 537 Score = 33.1 bits (74), Expect = 0.18 Identities = 16/56 (28%), Positives = 24/56 (42%) Frame = +2 Query: 155 NFRATGPPGTGMRFFVTCDPANVRHIFTSNHANFPKGAEFAAIFDIAGGSFFTTEG 322 N R G G+ T DP NV+ I + +F G ++ + G FT +G Sbjct: 101 NVRTVGLRIMGLNIIETTDPENVKAILATQFNDFSLGTRHDFLYSLLGDGIFTLDG 156
>GLPB_SALTY (Q8ZNG4) Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC| 1.1.99.5) (Anaerobic G-3-P dehydrogenase subunit B) (Anaerobic G3Pdhase B) Length = 419 Score = 32.7 bits (73), Expect = 0.23 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +2 Query: 200 VTCDPANVRHIFTSNHANFPKGAEFAAIFDIAGGSFFTT 316 VTC V I+T NHA+ P FA +A GSFF++ Sbjct: 282 VTCRRGTVSEIWTRNHADIPLRPRFAV---LASGSFFSS 317
>GLPB_SALTI (Q8Z553) Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC| 1.1.99.5) (Anaerobic G-3-P dehydrogenase subunit B) (Anaerobic G3Pdhase B) Length = 419 Score = 32.7 bits (73), Expect = 0.23 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +2 Query: 200 VTCDPANVRHIFTSNHANFPKGAEFAAIFDIAGGSFFTT 316 VTC V I+T NHA+ P FA +A GSFF++ Sbjct: 282 VTCRRGTVSEIWTRNHADIPLRPRFAV---LASGSFFSS 317
>GLPB_SHIFL (Q83ML0) Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC| 1.1.99.5) (Anaerobic G-3-P dehydrogenase subunit B) (Anaerobic G3Pdhase B) Length = 419 Score = 32.0 bits (71), Expect = 0.40 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = +2 Query: 200 VTCDPANVRHIFTSNHANFPKGAEFAAIFDIAGGSFFT 313 VTC V I+T NHA+ P FA +A GSFF+ Sbjct: 282 VTCKNGVVNEIWTRNHADIPLRPRFAV---LASGSFFS 316
>GLPB_ECOLI (P13033) Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC| 1.1.99.5) (Anaerobic G-3-P dehydrogenase subunit B) (Anaerobic G3Pdhase B) Length = 419 Score = 32.0 bits (71), Expect = 0.40 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = +2 Query: 200 VTCDPANVRHIFTSNHANFPKGAEFAAIFDIAGGSFFT 313 VTC V I+T NHA+ P FA +A GSFF+ Sbjct: 282 VTCKNGVVNEIWTRNHADIPLRPRFAV---LASGSFFS 316
>GLPB_ECO57 (Q8XE13) Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC| 1.1.99.5) (Anaerobic G-3-P dehydrogenase subunit B) (Anaerobic G3Pdhase B) Length = 419 Score = 32.0 bits (71), Expect = 0.40 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = +2 Query: 200 VTCDPANVRHIFTSNHANFPKGAEFAAIFDIAGGSFFT 313 VTC V I+T NHA+ P FA +A GSFF+ Sbjct: 282 VTCKNGVVNEIWTRNHADIPLRPRFAV---LASGSFFS 316
>CP52K_CANMA (Q12589) Cytochrome P450 52A11 (EC 1.14.14.-) (CYPLIIA11)| (Alkane-inducible P450-ALK8) Length = 519 Score = 30.8 bits (68), Expect = 0.89 Identities = 13/46 (28%), Positives = 22/46 (47%) Frame = +2 Query: 185 GMRFFVTCDPANVRHIFTSNHANFPKGAEFAAIFDIAGGSFFTTEG 322 GM+F T DP N++ + + +F G + + G FT +G Sbjct: 93 GMQFIATKDPENIKAMLATQFNDFTLGQRLSYFAPLLGKGIFTLDG 138
>GLPB_ECOL6 (Q8FFN4) Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC| 1.1.99.5) (Anaerobic G-3-P dehydrogenase subunit B) (Anaerobic G3Pdhase B) Length = 419 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = +2 Query: 200 VTCDPANVRHIFTSNHANFPKGAEFAAIFDIAGGSFFT 313 VTC V I+T NHA+ P F +A GSFF+ Sbjct: 282 VTCKNGVVNEIWTRNHADIPLRPRFVV---LASGSFFS 316
>Y2078_AERPE (Q9YA60) Hypothetical protein APE2078| Length = 437 Score = 30.4 bits (67), Expect = 1.2 Identities = 20/53 (37%), Positives = 27/53 (50%) Frame = -2 Query: 318 SVVKKLPPAMSKMAANSAPLGKFAWLDVKMCRTLAGSQVTKNRIPVPGGPVAL 160 +VV L PA+ AA S PLG F ++ + + G + R PV G PV L Sbjct: 176 TVVVGLHPAVLLAAATSPPLGVF---ELGLAAGMLGGSMKVYRSPVHGNPVPL 225
>C79B1_SINAL (O81345) Cytochrome P450 79B1 (EC 1.14.-.-)| Length = 542 Score = 30.0 bits (66), Expect = 1.5 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 10/50 (20%) Frame = +2 Query: 56 PTNWPIVGVLPSLVAN------LHN----LHDYLAVVLAGSGHNFRATGP 175 PT WPI+G++P+++ + LH+ L+ +A V GS H T P Sbjct: 61 PTGWPIIGMVPTMLKSRPVFRWLHSIMKQLNTEIACVRLGSTHVITVTCP 110
>CP134_DROME (Q9VG40) Probable cytochrome P450 313a4 (EC 1.14.-.-)| (CYPCCCXIIIA4) Length = 478 Score = 29.3 bits (64), Expect = 2.6 Identities = 25/86 (29%), Positives = 38/86 (44%) Frame = +2 Query: 56 PTNWPIVGVLPSLVANLHNLHDYLAVVLAGSGHNFRATGPPGTGMRFFVTCDPANVRHIF 235 P +PI+G+ L+ L+ + + F GP + F + DP V+ IF Sbjct: 35 PLGYPILGMAHWLMRREDILNAFGCFLDKHGPTIFSWLGP----IPFMIVSDPQVVQDIF 90 Query: 236 TSNHANFPKGAEFAAIFDIAGGSFFT 313 TS H KG + A+ D AG F+ Sbjct: 91 TSPHC-VNKGIIYKAVDDGAGVGLFS 115
>C79B2_ARATH (O81346) Cytochrome P450 79B2 (EC 1.14.-.-)| Length = 541 Score = 29.3 bits (64), Expect = 2.6 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 10/50 (20%) Frame = +2 Query: 56 PTNWPIVGVLPSLVAN------LHN----LHDYLAVVLAGSGHNFRATGP 175 PT WPI+G++P+++ + LH+ L+ +A V G+ H T P Sbjct: 60 PTGWPIIGMIPTMLKSRPVFRWLHSIMKQLNTEIACVKLGNTHVITVTCP 109
>CP52J_CANMA (Q12588) Cytochrome P450 52A10 (EC 1.14.14.-) (CYPLIIA10)| (Alkane-inducible P450-ALK7) Length = 519 Score = 28.9 bits (63), Expect = 3.4 Identities = 12/46 (26%), Positives = 21/46 (45%) Frame = +2 Query: 185 GMRFFVTCDPANVRHIFTSNHANFPKGAEFAAIFDIAGGSFFTTEG 322 GM+F T DP N++ + + + G + + G FT +G Sbjct: 93 GMQFIATKDPENIKAMLATQFNEYTLGQRLNFLAPLLGKGIFTLDG 138
>CP52A_CANTR (P10615) Cytochrome P450 52A1 (EC 1.14.14.-) (CYPLIIA1)| (Alkane-inducible P450-ALK1) Length = 543 Score = 28.9 bits (63), Expect = 3.4 Identities = 13/46 (28%), Positives = 21/46 (45%) Frame = +2 Query: 185 GMRFFVTCDPANVRHIFTSNHANFPKGAEFAAIFDIAGGSFFTTEG 322 G+ T DP NV+ I + +F G ++ + G FT +G Sbjct: 114 GIPLIETKDPENVKAILATQFNDFSLGTRHDFLYSLLGDGIFTLDG 159
>MURE_MYCLE (O69557) UDP-N-acetylmuramoylalanyl-D-glutamate--2,| 6-diaminopimelate ligase (EC 6.3.2.13) (UDP-N-acetylmuramyl-tripeptide synthetase) (Meso-diaminopimelate-adding enzyme) (UDP-MurNAc-tripeptide synthetase) Length = 530 Score = 28.5 bits (62), Expect = 4.4 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 5/67 (7%) Frame = +2 Query: 119 DYLAVVLAGSGHNFRATG--PPGTGMRFFVTCDPANVRH---IFTSNHANFPKGAEFAAI 283 D + V G ++RAT PG G + F DPA V+H I N AI Sbjct: 281 DAITVSALGQPASWRATDIRSPGVGAQEFTAVDPAGVQHRVGIRLPGRYNVANCLVALAI 340 Query: 284 FDIAGGS 304 D+ G S Sbjct: 341 LDVVGVS 347
>PPNK_BLOFL (Q7VRQ5) Probable inorganic polyphosphate/ATP-NAD kinase (EC| 2.7.1.23) (Poly(P)/ATP NAD kinase) Length = 293 Score = 28.5 bits (62), Expect = 4.4 Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 2/28 (7%) Frame = +2 Query: 89 SLVANLHNLHDY--LAVVLAGSGHNFRA 166 +++ NLH++ DY LA+V+ G G+ RA Sbjct: 53 AIIGNLHDIGDYADLAIVIGGDGNMLRA 80
>TYDC1_PETCR (Q06085) Tyrosine decarboxylase 1 (EC 4.1.1.25) (ELI5) (Fragment)| Length = 432 Score = 28.1 bits (61), Expect = 5.8 Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 3/34 (8%) Frame = +2 Query: 209 DPANVRHIFTSNHANF---PKGAEFAAIFDIAGG 301 DP N R I TS +NF PK E A ++D+ G Sbjct: 191 DPKNFRAIETSKSSNFKLCPKRLESAILYDLQNG 224
>DXR_CLOPE (Q8XJR1) 1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC| 1.1.1.267) (DXP reductoisomerase) (1-deoxyxylulose-5-phosphate reductoisomerase) (2-C-methyl-D-erythritol 4-phosphate synthase) Length = 384 Score = 28.1 bits (61), Expect = 5.8 Identities = 16/50 (32%), Positives = 24/50 (48%) Frame = +2 Query: 14 LYLRSSRSKGPAVLPTNWPIVGVLPSLVANLHNLHDYLAVVLAGSGHNFR 163 L +R ++ G +LP + + SL N HN D ++L SG FR Sbjct: 134 LVMREAKENGVKILPVDSEHSAIFQSLQGNAHNKID--KILLTASGGPFR 181
>C75A4_GENTR (Q96581) Flavonoid 3',5'-hydroxylase (EC 1.14.13.88) (F3'5'H)| (Cytochrome P450 75A4) Length = 516 Score = 28.1 bits (61), Expect = 5.8 Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 7/59 (11%) Frame = +2 Query: 56 PTNWPIVGVLPSL-------VANLHNLHDYLAVVLAGSGHNFRATGPPGTGMRFFVTCD 211 PT WPI+G LP L AN+ + + + GS H P F T D Sbjct: 45 PTGWPILGALPLLGNMPHVTFANMAKKYGSVMYLKVGS-HGLAIASTPDAAKAFLKTLD 102
>EF1A_PYRAE (O93729) Elongation factor 1-alpha (EF-1-alpha) (Elongation factor| Tu) (EF-Tu) Length = 444 Score = 27.7 bits (60), Expect = 7.5 Identities = 14/37 (37%), Positives = 23/37 (62%) Frame = -2 Query: 312 VKKLPPAMSKMAANSAPLGKFAWLDVKMCRTLAGSQV 202 +K L P +++ ++ PLG+FA D M RT+A Q+ Sbjct: 399 IKPLKPVVAEKFSDFPPLGRFALRD--MGRTIAAGQI 433
>CP52P_CANTR (P30612) Cytochrome P450 52C1 (EC 1.14.14.-) (CYPLIIC1)| (Alkane-inducible P450-ALK7) Length = 505 Score = 27.7 bits (60), Expect = 7.5 Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = +2 Query: 185 GMRFFVTCDPANVRHIFTSNHAN-FPKGAEFAAIFDIAGGSFFTTEG 322 G +VT D N+RHI ++ N + GA A+ G F +EG Sbjct: 86 GKTTYVTKDIENIRHILSATEMNSWNLGARPIALRPFIGDGIFASEG 132
>YPRB2_CORML (P0C1E9) Hypothetical protein in proB 3'region (EC 1.-.-.-)| Length = 304 Score = 27.7 bits (60), Expect = 7.5 Identities = 21/72 (29%), Positives = 29/72 (40%) Frame = +2 Query: 80 VLPSLVANLHNLHDYLAVVLAGSGHNFRATGPPGTGMRFFVTCDPANVRHIFTSNHANFP 259 V P + N LHD V + G+G G G+R P NV+ I +N Sbjct: 112 VRPEVENNKSWLHDNKTVAILGAG---------GIGVRLLEMLKPFNVKTIAVNNSGRPV 162 Query: 260 KGAEFAAIFDIA 295 +GA+ D A Sbjct: 163 EGADETFAMDKA 174
>Y2355_CORGL (P0C1E8) Hypothetical protein Cgl2355/cg2587 (EC 1.-.-.-)| Length = 304 Score = 27.7 bits (60), Expect = 7.5 Identities = 21/72 (29%), Positives = 29/72 (40%) Frame = +2 Query: 80 VLPSLVANLHNLHDYLAVVLAGSGHNFRATGPPGTGMRFFVTCDPANVRHIFTSNHANFP 259 V P + N LHD V + G+G G G+R P NV+ I +N Sbjct: 112 VRPEVENNKSWLHDNKTVAILGAG---------GIGVRLLEMLKPFNVKTIAVNNSGRPV 162 Query: 260 KGAEFAAIFDIA 295 +GA+ D A Sbjct: 163 EGADETFAMDKA 174
>FZO_DROSI (Q9N6P4) Transmembrane GTPase fzo (EC 3.6.5.-) (Protein fuzzy| onions) (Fragment) Length = 454 Score = 27.3 bits (59), Expect = 9.9 Identities = 13/40 (32%), Positives = 23/40 (57%) Frame = +2 Query: 47 AVLPTNWPIVGVLPSLVANLHNLHDYLAVVLAGSGHNFRA 166 A+ NWPIV +L LV + + +++Y A A +F++ Sbjct: 334 AIRSFNWPIVMILGGLVGSFY-MYEYAAWTTAAQERSFKS 372
>YIFB_SALTY (P57015) Hypothetical protein yifB| Length = 506 Score = 27.3 bits (59), Expect = 9.9 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +2 Query: 134 VLAGSGHNFRATGPPGTG 187 + A GHN GPPGTG Sbjct: 205 ITAAGGHNLLLIGPPGTG 222
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 27.3 bits (59), Expect = 9.9 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = +2 Query: 104 LHNLHDYLAVVLAGSGHNFRATGPPGT 184 L NL+D+LA +A + + T PPGT Sbjct: 242 LENLNDHLADPVANNAWAYAPTSPPGT 268
>YIFB_ECOLI (P22787) Hypothetical protein yifB| Length = 516 Score = 27.3 bits (59), Expect = 9.9 Identities = 10/18 (55%), Positives = 11/18 (61%) Frame = +2 Query: 134 VLAGSGHNFRATGPPGTG 187 + A GHN GPPGTG Sbjct: 215 ITAAGGHNLLLIGPPGTG 232 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,729,824 Number of Sequences: 219361 Number of extensions: 883484 Number of successful extensions: 2973 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 2881 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2971 length of database: 80,573,946 effective HSP length: 82 effective length of database: 62,586,344 effective search space used: 1502072256 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
