ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet67c06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY082350.1| Lolium perenne fructosyltransferase (FT2) mRNA, c... 50 0.005
2emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete ... 46 0.073
3emb|BX640411.1| Bordetella pertussis strain Tohama I, complete g... 46 0.073
4gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.073
5gb|AF006000.1|AF006000 Bordetella pertussis D-3-phosphoglycerate... 46 0.073
6gb|DQ267825.1| Dendrocalamopsis oldhamii vacuolar invertase BObe... 46 0.073
7gb|AC122142.1| Caenorhabditis briggsae cosmid CB019M24, complete... 44 0.29
8gb|AC091806.4| Homo sapiens chromosome X clone RP11-320G24 map p... 42 1.1
9gb|AC091809.4| Homo sapiens chromosome X clone XXbac-11940 map p... 42 1.1
10emb|AJ635225.1| Triticum aestivum mRNA for acid beta-fructofuran... 42 1.1
11gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.1
12dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.1
13dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.1
14gb|AC009731.6|AC009731 Homo sapiens 12 BAC RP11-438N16 (Roswell ... 42 1.1
15gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 42 1.1
16gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 4.5
17ref|XM_479899.1| Oryza sativa (japonica cultivar-group), mRNA 40 4.5
18ref|XM_473653.1| Oryza sativa (japonica cultivar-group), predic... 40 4.5
19ref|XM_472540.1| Oryza sativa (japonica cultivar-group), predic... 40 4.5
20gb|AC124339.9| Mus musculus chromosome 7, clone RP24-238P16, com... 40 4.5
21gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 40 4.5
22gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 4.5
23emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 4.5
24emb|AL592287.4| Human DNA sequence from clone RP11-107P1 on chro... 40 4.5
25emb|BX640435.1| Bordetella parapertussis strain 12822, complete ... 40 4.5
26emb|BX248358.1| Corynebacterium diphtheriae gravis NCTC13129, co... 40 4.5
27emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4,... 40 4.5
28emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in ... 40 4.5
29emb|AJ623275.1| Hordeum vulgare mRNA for soluble acid invertase ... 40 4.5
30gb|DQ007988.1| Zea mays RFLP core bin marker probe p-npi386 (CBM... 40 4.5
31dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
32dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
33dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome 40 4.5
34dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic D... 40 4.5
35gb|AC009399.5|AC009399 Homo sapiens chromosome 14 clone RP11-368... 40 4.5
36dbj|AK106337.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
37dbj|AK072050.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
38emb|AL357614.5|HS367B10 Homo sapiens chromosome 9 BAC RP11-367B1... 40 4.5
39gb|AC007627.3|AC007627 Genomic Sequence For Arabidopsis thaliana... 40 4.5
40dbj|AK068074.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
41dbj|AK065769.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 4.5
42gb|AC007399.1|AC007399 Arabidopsis thaliana BAC F14I23 from chro... 40 4.5
43emb|AL133445.4|CNS01DV1 Human chromosome 14 DNA sequence BAC R-1... 40 4.5
44emb|AL645583.12| Mouse DNA sequence from clone RP23-12N20 on chr... 40 4.5 
>gb|AY082350.1| Lolium perenne fructosyltransferase (FT2) mRNA, complete cds
          Length = 2337

 Score = 50.1 bits (25), Expect = 0.005
 Identities = 70/85 (82%)
 Strand = Plus / Plus

                                                                       
Query: 227 gccggaccgggccggtgtgcgctgcaatgctcatgactttggccgccgtgctccttgctg 286
           |||||||||||||  ||| ||| ||  ||||  |||| |||| ||||| ||||||||| |
Sbjct: 184 gccggaccgggcctctgttcgcagcgttgctgttgacgttggtcgccgcgctccttgccg 243

                                    
Query: 287 tcgccgcgctcgccggggtcaggct 311
           |||||||||| || || ||||||||
Sbjct: 244 tcgccgcgctggctggcgtcaggct 268
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>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16
          Length = 346287

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 212    ggcgcgcgcgccctggccggaccgggc 238
              |||||||||||||||||||| ||||||
Sbjct: 248247 ggcgcgcgcgccctggccgggccgggc 248221
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>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12
          Length = 346359

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 212    ggcgcgcgcgccctggccggaccgggc 238
              |||||||||||||||||||| ||||||
Sbjct: 151221 ggcgcgcgcgccctggccgggccgggc 151247
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 141     ccgcggcgcgacgccggcgccgg 163
               |||||||||||||||||||||||
Sbjct: 2376007 ccgcggcgcgacgccggcgccgg 2375985



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 211     gggcgcgcgcgccctggccg 230
               ||||||||||||||||||||
Sbjct: 1579711 gggcgcgcgcgccctggccg 1579692



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 286     gtcgccgcgctcgccggggt 305
               ||||||||||||||||||||
Sbjct: 1448664 gtcgccgcgctcgccggggt 1448645
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>gb|AF006000.1|AF006000 Bordetella pertussis D-3-phosphoglycerate dehydrogenase homolog
            (serA) and Brg1 (brg1) genes, complete cds
          Length = 10967

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 212  ggcgcgcgcgccctggccggaccgggc 238
            |||||||||||||||||||| ||||||
Sbjct: 3817 ggcgcgcgcgccctggccgggccgggc 3791
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>gb|DQ267825.1| Dendrocalamopsis oldhamii vacuolar invertase BObetaFRUCT3 mRNA,
           complete cds
          Length = 2155

 Score = 46.1 bits (23), Expect = 0.073
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 268 gccgccgtgctccttgctgtcgccgcgctcgccgg 302
           ||||| ||||||||||| || ||||||||||||||
Sbjct: 124 gccgcggtgctccttgccgtggccgcgctcgccgg 158
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>gb|AC122142.1| Caenorhabditis briggsae cosmid CB019M24, complete sequence
          Length = 111147

 Score = 44.1 bits (22), Expect = 0.29
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 86    ctcccccttctttggattctcc 107
             ||||||||||||||||||||||
Sbjct: 86791 ctcccccttctttggattctcc 86770
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>gb|AC091806.4| Homo sapiens chromosome X clone RP11-320G24 map p11.4, complete
             sequence
          Length = 182440

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 213   gcgcgcgcgccctggccggac 233
             |||||||||||||||||||||
Sbjct: 33331 gcgcgcgcgccctggccggac 33351
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>gb|AC091809.4| Homo sapiens chromosome X clone XXbac-11940 map p11.4, complete sequence
          Length = 218733

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 213    gcgcgcgcgccctggccggac 233
              |||||||||||||||||||||
Sbjct: 102256 gcgcgcgcgccctggccggac 102276
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>emb|AJ635225.1| Triticum aestivum mRNA for acid beta-fructofuranosidase precursor
           (inv1 gene)
          Length = 2250

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 271 gccgtgctccttgctgtcgccgcgctcgccggggtcaggct 311
           ||||||||||||   || |||||||||||||| ||||||||
Sbjct: 183 gccgtgctccttatggttgccgcgctcgccggcgtcaggct 223
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 141     ccgcggcgcgacgccggcgcc 161
               |||||||||||||||||||||
Sbjct: 3120159 ccgcggcgcgacgccggcgcc 3120139
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 309     gcttgccagcgagctgccggc 329
               |||||||||||||||||||||
Sbjct: 3703674 gcttgccagcgagctgccggc 3703694
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 205     caggctgggcgcgcgcgccctggcc 229
               |||||||| ||||||||||||||||
Sbjct: 2601876 caggctggccgcgcgcgccctggcc 2601900
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>gb|AC009731.6|AC009731 Homo sapiens 12 BAC RP11-438N16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 172749

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 73    cccaccaattcctctcccccttctt 97
             |||||||||||||||||||| ||||
Sbjct: 56802 cccaccaattcctctcccccatctt 56826
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 147     cgcgacgccggcgccggtgccgtgg 171
               ||||||||||| |||||||||||||
Sbjct: 1626277 cgcgacgccggtgccggtgccgtgg 1626253
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 144     cggcgcgacgccggcgccgg 163
               ||||||||||||||||||||
Sbjct: 1208876 cggcgcgacgccggcgccgg 1208895
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>ref|XM_479899.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1173

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 143 gcggcgcgacgccggcgccg 162
           ||||||||||||||||||||
Sbjct: 944 gcggcgcgacgccggcgccg 963
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>ref|XM_473653.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1821

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 149 cgacgccggcgccggtgccg 168
           ||||||||||||||||||||
Sbjct: 191 cgacgccggcgccggtgccg 210
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>ref|XM_472540.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1473

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 145  ggcgcgacgccggcgccggtgccg 168
            |||||| |||||||||||||||||
Sbjct: 1297 ggcgcgccgccggcgccggtgccg 1320
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>gb|AC124339.9| Mus musculus chromosome 7, clone RP24-238P16, complete sequence
          Length = 163620

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     tcctcccaccaattcctctc 88
              ||||||||||||||||||||
Sbjct: 129674 tcctcccaccaattcctctc 129655
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>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 190     gacgatgacgaggcccaggc 209
               ||||||||||||||||||||
Sbjct: 1964229 gacgatgacgaggcccaggc 1964248
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 143    gcggcgcgacgccggcgccggtgc 166
              |||||||| |||||||||||||||
Sbjct: 492355 gcggcgcgccgccggcgccggtgc 492378
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>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10,
             complete sequence
          Length = 144811

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 145   ggcgcgacgccggcgccggtgccg 168
             |||||| |||||||||||||||||
Sbjct: 10918 ggcgcgccgccggcgccggtgccg 10941
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>emb|AL592287.4| Human DNA sequence from clone RP11-107P1 on chromosome 1, complete
             sequence
          Length = 189385

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 79    aattcctctcccccttcttt 98
             ||||||||||||||||||||
Sbjct: 22490 aattcctctcccccttcttt 22471
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>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14
          Length = 346259

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    ggcgcgcgcgccctggccgg 231
              ||||||||||||||||||||
Sbjct: 167244 ggcgcgcgcgccctggccgg 167225
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>emb|BX248358.1| Corynebacterium diphtheriae gravis NCTC13129, complete genome; segment
              5/8
          Length = 348408

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 283    gctgtcgccgcgctcgccgg 302
              ||||||||||||||||||||
Sbjct: 170788 gctgtcgccgcgctcgccgg 170807
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>emb|AL662987.3|OSJN00188 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088A01,
              complete sequence
          Length = 186325

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 149    cgacgccggcgccggtgccg 168
              ||||||||||||||||||||
Sbjct: 102320 cgacgccggcgccggtgccg 102339
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>emb|BX546502.7| Zebrafish DNA sequence from clone RP71-62P22 in linkage group 25,
             complete sequence
          Length = 169168

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   gcgcgacgccggcgccggtg 165
             ||||||||||||||||||||
Sbjct: 34120 gcgcgacgccggcgccggtg 34101
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>emb|AJ623275.1| Hordeum vulgare mRNA for soluble acid invertase (sai gene)
          Length = 2038

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 80/100 (80%)
 Strand = Plus / Plus

                                                                       
Query: 227 gccggaccgggccggtgtgcgctgcaatgctcatgactttggccgccgtgctccttgctg 286
           |||||||||||||| | || || || || ||| | |||| ||||||  |||| || ||||
Sbjct: 126 gccggaccgggccgctctgtgccgcgattctccttacttcggccgcgctgctgctcgctg 185

                                                   
Query: 287 tcgccgcgctcgccggggtcaggcttgccagcgagctgcc 326
           | |||||||| ||||| |||||| | ||| || |||||||
Sbjct: 186 tggccgcgctggccggcgtcagggtcgccggccagctgcc 225
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>gb|DQ007988.1| Zea mays RFLP core bin marker probe p-npi386 (CBM4.04), complete
           sequence
          Length = 1180

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 145 ggcgcgacgccggcgccggtgccg 168
           ||||||||||||||||||| ||||
Sbjct: 161 ggcgcgacgccggcgccggcgccg 184
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 149      cgacgccggcgccggtgccg 168
                ||||||||||||||||||||
Sbjct: 29429304 cgacgccggcgccggtgccg 29429323



 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 145      ggcgcgacgccggcgccggtgccg 168
                |||||| |||||||||||||||||
Sbjct: 21361168 ggcgcgccgccggcgccggtgccg 21361191
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 143     gcggcgcgacgccggcgccg 162
               ||||||||||||||||||||
Sbjct: 1535044 gcggcgcgacgccggcgccg 1535025
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>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 231     gaccgggccggtgtgcgctg 250
               ||||||||||||||||||||
Sbjct: 3298796 gaccgggccggtgtgcgctg 3298815
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>dbj|AP003886.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1163_G08
          Length = 150676

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 143   gcggcgcgacgccggcgccg 162
             ||||||||||||||||||||
Sbjct: 62532 gcggcgcgacgccggcgccg 62513
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>gb|AC009399.5|AC009399 Homo sapiens chromosome 14 clone RP11-368K8 containing KIAA0998 gene,
              partial cds, complete sequence
          Length = 185964

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 79     aattcctctcccccttcttt 98
              ||||||||||||||||||||
Sbjct: 108332 aattcctctcccccttcttt 108313
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>dbj|AK106337.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-G03, full
           insert sequence
          Length = 1384

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 145 ggcgcgacgccggcgccggtgccg 168
           |||||| |||||||||||||||||
Sbjct: 951 ggcgcgccgccggcgccggtgccg 974
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>dbj|AK072050.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110C07, full
           insert sequence
          Length = 1340

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 145 ggcgcgacgccggcgccggtgccg 168
           |||||| |||||||||||||||||
Sbjct: 933 ggcgcgccgccggcgccggtgccg 956
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>emb|AL357614.5|HS367B10 Homo sapiens chromosome 9 BAC RP11-367B10, complete sequence
          Length = 182378

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    attagcagaggtgataatcg 63
             ||||||||||||||||||||
Sbjct: 64641 attagcagaggtgataatcg 64622
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>gb|AC007627.3|AC007627 Genomic Sequence For Arabidopsis thaliana Clone F15F15, Chromosome V,
             complete sequence
          Length = 157000

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    accttcttctcgttcttgtc 40
             ||||||||||||||||||||
Sbjct: 12947 accttcttctcgttcttgtc 12928
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>dbj|AK068074.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132A21, full
            insert sequence
          Length = 4615

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 149  cgacgccggcgccggtgccg 168
            ||||||||||||||||||||
Sbjct: 3350 cgacgccggcgccggtgccg 3331
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>dbj|AK065769.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013040G18, full
           insert sequence
          Length = 2259

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 149 cgacgccggcgccggtgccg 168
           ||||||||||||||||||||
Sbjct: 253 cgacgccggcgccggtgccg 272
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>gb|AC007399.1|AC007399 Arabidopsis thaliana BAC F14I23 from chromosome V near 69 cM, complete
             sequence
          Length = 105223

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    accttcttctcgttcttgtc 40
             ||||||||||||||||||||
Sbjct: 69886 accttcttctcgttcttgtc 69867
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>emb|AL133445.4|CNS01DV1 Human chromosome 14 DNA sequence BAC R-1046B16 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 190946

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 143    gcggcgcgacgccggcgccg 162
              ||||||||||||||||||||
Sbjct: 127154 gcggcgcgacgccggcgccg 127173
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>emb|AL645583.12| Mouse DNA sequence from clone RP23-12N20 on chromosome 11, complete
             sequence
          Length = 67643

 Score = 40.1 bits (20), Expect = 4.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   ccaggctgggcgcgcgcgcc 223
             ||||||||||||||||||||
Sbjct: 35335 ccaggctgggcgcgcgcgcc 35316


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,192,381
Number of Sequences: 3902068
Number of extensions: 3192381
Number of successful extensions: 59626
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57730
Number of HSP's gapped (non-prelim): 1896
length of query: 341
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 319
effective length of database: 17,147,199,772
effective search space: 5469956727268
effective search space used: 5469956727268
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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