ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet67a04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476301.2| Oryza sativa (japonica cultivar-group), mRNA 208 1e-50
2gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete se... 208 1e-50
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
4dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
5dbj|AK105690.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
6dbj|AK068474.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
7gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence 145 1e-31
8ref|NM_124534.2| Arabidopsis thaliana unknown protein AT5G51550 ... 42 1.4
9emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 1.4
10gb|AY103306.1| Arabidopsis thaliana AT5g51550/K17N15_10 mRNA, co... 42 1.4
11gb|AE011873.1| Xanthomonas axonopodis pv. citri str. 306, secti... 42 1.4
12gb|AY058883.1| Arabidopsis thaliana AT5g51550/K17N15_10 mRNA, co... 42 1.4
13gb|AF428325.1|AF428325 Arabidopsis thaliana AT5g51550/K17N15_10 ... 42 1.4
14emb|BX821853.1|CNS0A8AB Arabidopsis thaliana Full-length cDNA Co... 42 1.4
15emb|BX832775.1|CNS0A0KF Arabidopsis thaliana Full-length cDNA Co... 42 1.4
16emb|BX831378.1|CNS0A0O9 Arabidopsis thaliana Full-length cDNA Co... 42 1.4
17gb|AY087269.1| Arabidopsis thaliana clone 33455 mRNA, complete s... 42 1.4
18dbj|AB018109.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 42 1.4
19gb|AY666490.1| Anas platyrhynchos voucher 1B-3367 cytochrome oxi... 40 5.4
20gb|AY666496.1| Anas platyrhynchos voucher 1B-3638 cytochrome oxi... 40 5.4
21gb|AY666221.1| Anas rubripes voucher 1B-726 cytochrome oxidase s... 40 5.4
22gb|AY666211.1| Anas rubripes voucher 1B-711 cytochrome oxidase s... 40 5.4
23gb|AY666405.1| Anas crecca voucher 1B-2590 cytochrome oxidase su... 40 5.4
24ref|XM_466501.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
25ref|NM_191206.1| Oryza sativa (japonica cultivar-group), predic... 40 5.4
26ref|NM_190003.1| Oryza sativa (japonica cultivar-group), predic... 40 5.4
27ref|XM_478424.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
28ref|XM_478215.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
29ref|XM_883530.1| Leishmania major strain Friedlin hypothetical p... 40 5.4
30emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4,... 40 5.4
31ref|XM_741765.1| Aspergillus fumigatus Af293 hypothetical protei... 40 5.4
32gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome 40 5.4
33gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.4
34dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
35dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
36dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
37gb|AC010907.10| Homo sapiens BAC clone RP11-568H24 from 2, compl... 40 5.4
38dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
39dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
40dbj|AP003234.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
41dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
42dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
43dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
44dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
45dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
46dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
47dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
48dbj|AK121812.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
49dbj|AK069976.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
50dbj|AK064235.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
51gb|AC164420.4| Mus musculus chromosome 8, clone RP24-388L13, com... 40 5.4
52gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.4
53gb|AY662783.1| Pterophyllum scalare cytochrome oxidase subunit I... 40 5.4
54gb|AC120789.12| Mus musculus chromosome 8, clone RP23-441F24, co... 40 5.4
55gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome 40 5.4 
>ref|XM_476301.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1348

 Score =  208 bits (105), Expect = 1e-50
 Identities = 150/165 (90%)
 Strand = Plus / Plus

                                                                       
Query: 137 tcggcgcgtccaagaagttcgaggggtcgtccgacctcgtcaagctcgagtaccacatgg 196
           |||| |||||||||||||||||||||||||| ||  ||||||||||  ||||||||||||
Sbjct: 217 tcggggcgtccaagaagttcgaggggtcgtcggatttcgtcaagctgcagtaccacatgg 276

                                                                       
Query: 197 gccccgtcctcgccgccgacatcaccgtccacccgatctggtacggcgcctggccggccg 256
           ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||||
Sbjct: 277 gccccgtcctcgccgccgacatcacggtccacccgatctggtacggccggtggcccgccg 336

                                                        
Query: 257 accagaagcgcaccatccgcgccttcctccgctccctctcgccgc 301
           | |||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 337 agcagaagcgcaccatccgcgcgttcctccggtcgctctcgccgc 381



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                       
Query: 311 tcccgtccccgtccgtcgcggactggtggcgcaccgtccggctctacacggaccagacca 370
           ||||||| |||||||| ||||  |||||||||||||| ||||| ||||| ||||||||| 
Sbjct: 409 tcccgtcgccgtccgtggcggcgtggtggcgcaccgtgcggctgtacaccgaccagacct 468

                        
Query: 371 cggccaacgtgtc 383
           |||| ||||||||
Sbjct: 469 cggcgaacgtgtc 481
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>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence
          Length = 136866

 Score =  208 bits (105), Expect = 1e-50
 Identities = 150/165 (90%)
 Strand = Plus / Plus

                                                                          
Query: 137    tcggcgcgtccaagaagttcgaggggtcgtccgacctcgtcaagctcgagtaccacatgg 196
              |||| |||||||||||||||||||||||||| ||  ||||||||||  ||||||||||||
Sbjct: 109368 tcggggcgtccaagaagttcgaggggtcgtcggatttcgtcaagctgcagtaccacatgg 109427

                                                                          
Query: 197    gccccgtcctcgccgccgacatcaccgtccacccgatctggtacggcgcctggccggccg 256
              ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||||
Sbjct: 109428 gccccgtcctcgccgccgacatcacggtccacccgatctggtacggccggtggcccgccg 109487

                                                           
Query: 257    accagaagcgcaccatccgcgccttcctccgctccctctcgccgc 301
              | |||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 109488 agcagaagcgcaccatccgcgcgttcctccggtcgctctcgccgc 109532



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                          
Query: 311    tcccgtccccgtccgtcgcggactggtggcgcaccgtccggctctacacggaccagacca 370
              ||||||| |||||||| ||||  |||||||||||||| ||||| ||||| ||||||||| 
Sbjct: 109560 tcccgtcgccgtccgtggcggcgtggtggcgcaccgtgcggctgtacaccgaccagacct 109619

                           
Query: 371    cggccaacgtgtc 383
              |||| ||||||||
Sbjct: 109620 cggcgaacgtgtc 109632
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score =  208 bits (105), Expect = 1e-50
 Identities = 150/165 (90%)
 Strand = Plus / Plus

                                                                           
Query: 137     tcggcgcgtccaagaagttcgaggggtcgtccgacctcgtcaagctcgagtaccacatgg 196
               |||| |||||||||||||||||||||||||| ||  ||||||||||  ||||||||||||
Sbjct: 1789152 tcggggcgtccaagaagttcgaggggtcgtcggatttcgtcaagctgcagtaccacatgg 1789211

                                                                           
Query: 197     gccccgtcctcgccgccgacatcaccgtccacccgatctggtacggcgcctggccggccg 256
               ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||||
Sbjct: 1789212 gccccgtcctcgccgccgacatcacggtccacccgatctggtacggccggtggcccgccg 1789271

                                                            
Query: 257     accagaagcgcaccatccgcgccttcctccgctccctctcgccgc 301
               | |||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 1789272 agcagaagcgcaccatccgcgcgttcctccggtcgctctcgccgc 1789316



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                           
Query: 311     tcccgtccccgtccgtcgcggactggtggcgcaccgtccggctctacacggaccagacca 370
               ||||||| |||||||| ||||  |||||||||||||| ||||| ||||| ||||||||| 
Sbjct: 1789344 tcccgtcgccgtccgtggcggcgtggtggcgcaccgtgcggctgtacaccgaccagacct 1789403

                            
Query: 371     cggccaacgtgtc 383
               |||| ||||||||
Sbjct: 1789404 cggcgaacgtgtc 1789416
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>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0679C08
          Length = 156266

 Score =  208 bits (105), Expect = 1e-50
 Identities = 150/165 (90%)
 Strand = Plus / Plus

                                                                          
Query: 137    tcggcgcgtccaagaagttcgaggggtcgtccgacctcgtcaagctcgagtaccacatgg 196
              |||| |||||||||||||||||||||||||| ||  ||||||||||  ||||||||||||
Sbjct: 114301 tcggggcgtccaagaagttcgaggggtcgtcggatttcgtcaagctgcagtaccacatgg 114360

                                                                          
Query: 197    gccccgtcctcgccgccgacatcaccgtccacccgatctggtacggcgcctggccggccg 256
              ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||||
Sbjct: 114361 gccccgtcctcgccgccgacatcacggtccacccgatctggtacggccggtggcccgccg 114420

                                                           
Query: 257    accagaagcgcaccatccgcgccttcctccgctccctctcgccgc 301
              | |||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 114421 agcagaagcgcaccatccgcgcgttcctccggtcgctctcgccgc 114465



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                          
Query: 311    tcccgtccccgtccgtcgcggactggtggcgcaccgtccggctctacacggaccagacca 370
              ||||||| |||||||| ||||  |||||||||||||| ||||| ||||| ||||||||| 
Sbjct: 114493 tcccgtcgccgtccgtggcggcgtggtggcgcaccgtgcggctgtacaccgaccagacct 114552

                           
Query: 371    cggccaacgtgtc 383
              |||| ||||||||
Sbjct: 114553 cggcgaacgtgtc 114565
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>dbj|AK105690.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-C03, full
           insert sequence
          Length = 1482

 Score =  208 bits (105), Expect = 1e-50
 Identities = 150/165 (90%)
 Strand = Plus / Plus

                                                                       
Query: 137 tcggcgcgtccaagaagttcgaggggtcgtccgacctcgtcaagctcgagtaccacatgg 196
           |||| |||||||||||||||||||||||||| ||  ||||||||||  ||||||||||||
Sbjct: 245 tcggggcgtccaagaagttcgaggggtcgtcggatttcgtcaagctgcagtaccacatgg 304

                                                                       
Query: 197 gccccgtcctcgccgccgacatcaccgtccacccgatctggtacggcgcctggccggccg 256
           ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||||
Sbjct: 305 gccccgtcctcgccgccgacatcacggtccacccgatctggtacggccggtggcccgccg 364

                                                        
Query: 257 accagaagcgcaccatccgcgccttcctccgctccctctcgccgc 301
           | |||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 365 agcagaagcgcaccatccgcgcgttcctccggtcgctctcgccgc 409



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                       
Query: 311 tcccgtccccgtccgtcgcggactggtggcgcaccgtccggctctacacggaccagacca 370
           ||||||| |||||||| ||||  |||||||||||||| ||||| ||||| ||||||||| 
Sbjct: 437 tcccgtcgccgtccgtggcggcgtggtggcgcaccgtgcggctgtacaccgaccagacct 496

                        
Query: 371 cggccaacgtgtc 383
           |||| ||||||||
Sbjct: 497 cggcgaacgtgtc 509
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>dbj|AK068474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013155H19, full
           insert sequence
          Length = 1351

 Score =  208 bits (105), Expect = 1e-50
 Identities = 150/165 (90%)
 Strand = Plus / Plus

                                                                       
Query: 137 tcggcgcgtccaagaagttcgaggggtcgtccgacctcgtcaagctcgagtaccacatgg 196
           |||| |||||||||||||||||||||||||| ||  ||||||||||  ||||||||||||
Sbjct: 219 tcggggcgtccaagaagttcgaggggtcgtcggatttcgtcaagctgcagtaccacatgg 278

                                                                       
Query: 197 gccccgtcctcgccgccgacatcaccgtccacccgatctggtacggcgcctggccggccg 256
           ||||||||||||||||||||||||| |||||||||||||||||||||   ||||| ||||
Sbjct: 279 gccccgtcctcgccgccgacatcacggtccacccgatctggtacggccggtggccagccg 338

                                                        
Query: 257 accagaagcgcaccatccgcgccttcctccgctccctctcgccgc 301
           | |||||||||||||||||||| |||||||| || ||||||||||
Sbjct: 339 agcagaagcgcaccatccgcgcgttcctccggtcgctctcgccgc 383



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 64/73 (87%)
 Strand = Plus / Plus

                                                                       
Query: 311 tcccgtccccgtccgtcgcggactggtggcgcaccgtccggctctacacggaccagacca 370
           ||||||| |||||||| ||||  |||||||||||||| ||||| ||||| ||||||||| 
Sbjct: 411 tcccgtcgccgtccgtggcggcgtggtggcgcaccgtgcggctgtacaccgaccagacct 470

                        
Query: 371 cggccaacgtgtc 383
           |||| ||||||||
Sbjct: 471 cggcgaacgtgtc 483
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>gb|AF488412.1| Sorghum bicolor BAC 131L1, complete sequence
          Length = 130987

 Score =  145 bits (73), Expect = 1e-31
 Identities = 139/161 (86%)
 Strand = Plus / Plus

                                                                          
Query: 139    ggcgcgtccaagaagttcgaggggtcgtccgacctcgtcaagctcgagtaccacatgggc 198
              ||||| || |||||||||||||| ||||| ||  |||| ||||| |||||||||||||| 
Sbjct: 101784 ggcgcttcaaagaagttcgagggctcgtcggagttcgtgaagctagagtaccacatgggt 101843

                                                                          
Query: 199    cccgtcctcgccgccgacatcaccgtccacccgatctggtacggcgcctggccggccgac 258
              |||||||| ||  ||| |||||| || |||||||||||||| ||||||||||| ||||  
Sbjct: 101844 cccgtcctggcgtccgccatcacggtgcacccgatctggtatggcgcctggcccgccgcg 101903

                                                       
Query: 259    cagaagcgcaccatccgcgccttcctccgctccctctcgcc 299
              ||||||||||| |||||||| ||||||||||||||| ||||
Sbjct: 101904 cagaagcgcacgatccgcgcgttcctccgctccctcgcgcc 101944



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 50/54 (92%)
 Strand = Plus / Plus

                                                                    
Query: 333    ctggtggcgcaccgtccggctctacacggaccagaccacggccaacgtgtcggc 386
              |||||||||||| || ||||||||||||||||||||| | ||||||||||||||
Sbjct: 101990 ctggtggcgcacggtgcggctctacacggaccagacctccgccaacgtgtcggc 102043
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>ref|NM_124534.2| Arabidopsis thaliana unknown protein AT5G51550 mRNA, complete cds
          Length = 1402

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 215 acatcaccgtccacccgatctggtacggc 243
           |||||||||| ||||| ||||||||||||
Sbjct: 286 acatcaccgttcacccaatctggtacggc 314
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 228     cccgatctggtacggcgcctggccg 252
               |||||||||| ||||||||||||||
Sbjct: 2892204 cccgatctgggacggcgcctggccg 2892228
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>gb|AY103306.1| Arabidopsis thaliana AT5g51550/K17N15_10 mRNA, complete cds
          Length = 1014

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 215 acatcaccgtccacccgatctggtacggc 243
           |||||||||| ||||| ||||||||||||
Sbjct: 197 acatcaccgttcacccaatctggtacggc 225
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>gb|AE011873.1| Xanthomonas axonopodis pv. citri str. 306,  section 251 of 469 of the
            complete genome
          Length = 10565

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 228  cccgatctggtacggcgcctggccg 252
            |||||||||| ||||||||||||||
Sbjct: 7807 cccgatctgggacggcgcctggccg 7831
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>gb|AY058883.1| Arabidopsis thaliana AT5g51550/K17N15_10 mRNA, complete cds
          Length = 1221

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 215 acatcaccgtccacccgatctggtacggc 243
           |||||||||| ||||| ||||||||||||
Sbjct: 285 acatcaccgttcacccaatctggtacggc 313
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>gb|AF428325.1|AF428325 Arabidopsis thaliana AT5g51550/K17N15_10 mRNA, complete cds
          Length = 1211

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 215 acatcaccgtccacccgatctggtacggc 243
           |||||||||| ||||| ||||||||||||
Sbjct: 282 acatcaccgttcacccaatctggtacggc 310
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>emb|BX821853.1|CNS0A8AB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL7ZB01 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 978

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 215 acatcaccgtccacccgatctggtacggc 243
           |||||||||| ||||| ||||||||||||
Sbjct: 554 acatcaccgttcacccaatctggtacggc 526
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>emb|BX832775.1|CNS0A0KF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL10ZD05 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1193

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 215 acatcaccgtccacccgatctggtacggc 243
           |||||||||| ||||| ||||||||||||
Sbjct: 264 acatcaccgttcacccaatctggtacggc 292
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>emb|BX831378.1|CNS0A0O9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS84ZD11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1234

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 215 acatcaccgtccacccgatctggtacggc 243
           |||||||||| ||||| ||||||||||||
Sbjct: 268 acatcaccgttcacccaatctggtacggc 296
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>gb|AY087269.1| Arabidopsis thaliana clone 33455 mRNA, complete sequence
          Length = 1272

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 215 acatcaccgtccacccgatctggtacggc 243
           |||||||||| ||||| ||||||||||||
Sbjct: 286 acatcaccgttcacccaatctggtacggc 314
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>dbj|AB018109.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K17N15
          Length = 81293

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 215   acatcaccgtccacccgatctggtacggc 243
             |||||||||| ||||| ||||||||||||
Sbjct: 39185 acatcaccgttcacccaatctggtacggc 39157
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>gb|AY666490.1| Anas platyrhynchos voucher 1B-3367 cytochrome oxidase subunit 1
           (COI) gene, partial cds; mitochondrial
          Length = 694

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 198 ccccgtcctcgccgccgacatcac 221
           ||||||||||||||||| ||||||
Sbjct: 547 ccccgtcctcgccgccggcatcac 570
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>gb|AY666496.1| Anas platyrhynchos voucher 1B-3638 cytochrome oxidase subunit 1
           (COI) gene, partial cds; mitochondrial
          Length = 694

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 198 ccccgtcctcgccgccgacatcac 221
           ||||||||||||||||| ||||||
Sbjct: 547 ccccgtcctcgccgccggcatcac 570
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>gb|AY666221.1| Anas rubripes voucher 1B-726 cytochrome oxidase subunit 1 (COI)
           gene, partial cds; mitochondrial
          Length = 692

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 198 ccccgtcctcgccgccgacatcac 221
           ||||||||||||||||| ||||||
Sbjct: 545 ccccgtcctcgccgccggcatcac 568
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>gb|AY666211.1| Anas rubripes voucher 1B-711 cytochrome oxidase subunit 1 (COI)
           gene, partial cds; mitochondrial
          Length = 694

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 198 ccccgtcctcgccgccgacatcac 221
           ||||||||||||||||| ||||||
Sbjct: 547 ccccgtcctcgccgccggcatcac 570
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>gb|AY666405.1| Anas crecca voucher 1B-2590 cytochrome oxidase subunit 1 (COI)
           gene, partial cds; mitochondrial
          Length = 649

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 198 ccccgtcctcgccgccgacatcac 221
           ||||||||||||||||| ||||||
Sbjct: 502 ccccgtcctcgccgccggcatcac 525
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>ref|XM_466501.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1861

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 273 ccgcgccttcctccgctccc 292
           ||||||||||||||||||||
Sbjct: 421 ccgcgccttcctccgctccc 440
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>ref|NM_191206.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1071

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 128 tggccgccctcggcgcgtcc 147
           ||||||||||||||||||||
Sbjct: 530 tggccgccctcggcgcgtcc 549
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>ref|NM_190003.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1494

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 272 tccgcgccttcctccgctccctct 295
           |||||||| |||||||||||||||
Sbjct: 86  tccgcgccctcctccgctccctct 109
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>ref|XM_478424.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2115

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 193 atgggccccgtcctcgccgc 212
           ||||||||||||||||||||
Sbjct: 186 atgggccccgtcctcgccgc 167
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>ref|XM_478215.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1361

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 agtaccacatgggccccgtc 204
           ||||||||||||||||||||
Sbjct: 137 agtaccacatgggccccgtc 156
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>ref|XM_883530.1| Leishmania major strain Friedlin hypothetical protein (L2385.05)
            partial mRNA
          Length = 2631

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 205  ctcgccgccgacatcaccgt 224
            ||||||||||||||||||||
Sbjct: 1776 ctcgccgccgacatcaccgt 1795
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>emb|AL139794.3|LMFLCHR4B Leishmania major Friedlin chromosome 4, right end
          Length = 247462

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 205    ctcgccgccgacatcaccgt 224
              ||||||||||||||||||||
Sbjct: 194124 ctcgccgccgacatcaccgt 194105
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>ref|XM_741765.1| Aspergillus fumigatus Af293 hypothetical protein (Afu7g00720)
           partial mRNA
          Length = 1143

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 301 cagtcccccgtcccgtccccgtcc 324
           |||||||| |||||||||||||||
Sbjct: 958 cagtccccagtcccgtccccgtcc 935
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>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome
          Length = 4406967

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 204    cctcgccgccgacatcaccg 223
              ||||||||||||||||||||
Sbjct: 118192 cctcgccgccgacatcaccg 118211
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    cctcgccgccgacatcaccg 223
              ||||||||||||||||||||
Sbjct: 771925 cctcgccgccgacatcaccg 771906
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 193      atgggccccgtcctcgccgc 212
                ||||||||||||||||||||
Sbjct: 19885225 atgggccccgtcctcgccgc 19885206



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 185      agtaccacatgggccccgtc 204
                ||||||||||||||||||||
Sbjct: 18564848 agtaccacatgggccccgtc 18564867
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 273      ccgcgccttcctccgctccc 292
                ||||||||||||||||||||
Sbjct: 22998643 ccgcgccttcctccgctccc 22998662
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 272      tccgcgccttcctccgctccctct 295
                |||||||| |||||||||||||||
Sbjct: 40763888 tccgcgccctcctccgctccctct 40763865



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 128      tggccgccctcggcgcgtcc 147
                ||||||||||||||||||||
Sbjct: 31314508 tggccgccctcggcgcgtcc 31314489



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 200      ccgtcctcgccgccgacatc 219
                ||||||||||||||||||||
Sbjct: 25998071 ccgtcctcgccgccgacatc 25998052
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>gb|AC010907.10| Homo sapiens BAC clone RP11-568H24 from 2, complete sequence
          Length = 139357

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 305    cccccgtcccgtccccgtcc 324
              ||||||||||||||||||||
Sbjct: 117790 cccccgtcccgtccccgtcc 117809
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>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0052O12
          Length = 167881

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 272   tccgcgccttcctccgctccctct 295
             |||||||| |||||||||||||||
Sbjct: 66534 tccgcgccctcctccgctccctct 66511
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>dbj|AP002910.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0707D10
          Length = 172003

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 200   ccgtcctcgccgccgacatc 219
             ||||||||||||||||||||
Sbjct: 94138 ccgtcctcgccgccgacatc 94119
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>dbj|AP003234.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0038D11
          Length = 156465

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 200  ccgtcctcgccgccgacatc 219
            ||||||||||||||||||||
Sbjct: 1646 ccgtcctcgccgccgacatc 1627
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>dbj|AP003076.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0481E12
          Length = 161563

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 128   tggccgccctcggcgcgtcc 147
             ||||||||||||||||||||
Sbjct: 68791 tggccgccctcggcgcgtcc 68772
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>dbj|AP004259.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0005E02
          Length = 89380

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   agtaccacatgggccccgtc 204
             ||||||||||||||||||||
Sbjct: 17390 agtaccacatgggccccgtc 17409
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>dbj|AP004079.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1067_B01
          Length = 100525

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   ccgcgccttcctccgctccc 292
             ||||||||||||||||||||
Sbjct: 23040 ccgcgccttcctccgctccc 23059
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>dbj|AP005874.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0016G10
          Length = 143211

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 273    ccgcgccttcctccgctccc 292
              ||||||||||||||||||||
Sbjct: 118445 ccgcgccttcctccgctccc 118464
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>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0036M16
          Length = 158880

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   atgggccccgtcctcgccgc 212
             ||||||||||||||||||||
Sbjct: 49875 atgggccccgtcctcgccgc 49856
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>dbj|AP003956.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1457_D07
          Length = 103688

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   agtaccacatgggccccgtc 204
             ||||||||||||||||||||
Sbjct: 93604 agtaccacatgggccccgtc 93623
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>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0650C03
          Length = 144337

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 193    atgggccccgtcctcgccgc 212
              ||||||||||||||||||||
Sbjct: 125384 atgggccccgtcctcgccgc 125365
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>dbj|AK121812.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033098C24, full
           insert sequence
          Length = 2185

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 193 atgggccccgtcctcgccgc 212
           ||||||||||||||||||||
Sbjct: 54  atgggccccgtcctcgccgc 35
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>dbj|AK069976.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023035N02, full
           insert sequence
          Length = 1861

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 273 ccgcgccttcctccgctccc 292
           ||||||||||||||||||||
Sbjct: 421 ccgcgccttcctccgctccc 440
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>dbj|AK064235.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-H11, full
           insert sequence
          Length = 1361

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 185 agtaccacatgggccccgtc 204
           ||||||||||||||||||||
Sbjct: 137 agtaccacatgggccccgtc 156
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>gb|AC164420.4| Mus musculus chromosome 8, clone RP24-388L13, complete sequence
          Length = 174120

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 305    cccccgtcccgtccccgtcc 324
              ||||||||||||||||||||
Sbjct: 125849 cccccgtcccgtccccgtcc 125830
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>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 240     cggcgcctggccggccgacc 259
               ||||||||||||||||||||
Sbjct: 3408867 cggcgcctggccggccgacc 3408848
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>gb|AY662783.1| Pterophyllum scalare cytochrome oxidase subunit I gene, partial
           cds; mitochondrial
          Length = 649

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 198 ccccgtcctcgccgccgacatcac 221
           ||||||||||||||||| ||||||
Sbjct: 547 ccccgtcctcgccgccggcatcac 570
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>gb|AC120789.12| Mus musculus chromosome 8, clone RP23-441F24, complete sequence
          Length = 204013

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   cccccgtcccgtccccgtcc 324
             ||||||||||||||||||||
Sbjct: 32397 cccccgtcccgtccccgtcc 32378
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>gb|AE014295.3| Bifidobacterium longum NCC2705, complete genome
          Length = 2256640

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 366    gaccacggccaacgtgtcgg 385
              ||||||||||||||||||||
Sbjct: 775966 gaccacggccaacgtgtcgg 775947


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,465,751
Number of Sequences: 3902068
Number of extensions: 1465751
Number of successful extensions: 39237
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 38583
Number of HSP's gapped (non-prelim): 654
length of query: 406
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 384
effective length of database: 17,147,199,772
effective search space: 6584524712448
effective search space used: 6584524712448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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