ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet66e09 |
|---|---|
| Clone Library Name | barley_pub |
>PLA1_PLAAC (Q8GT41) Putative invertase inhibitor precursor (Pollen allergen| Pla a 1) Length = 179 Score = 36.2 bits (82), Expect = 0.048 Identities = 19/39 (48%), Positives = 22/39 (56%), Gaps = 6/39 (15%) Frame = +3 Query: 261 LVQSTCNATTY------YDLCVAALVADPASSTADLRGL 359 +VQ TC YD CV +L ADP S TADL+GL Sbjct: 26 IVQGTCKKVAQRSPNVNYDFCVKSLGADPKSHTADLQGL 64
>PME3_CITSI (P83948) Pectinesterase-3 precursor (EC 3.1.1.11) (Pectin| methylesterase 3) (PE 3) Length = 584 Score = 35.4 bits (80), Expect = 0.081 Identities = 19/61 (31%), Positives = 32/61 (52%) Frame = +3 Query: 156 ATASTVPTIPAQPGKPNSNNKQKQGGAPAGPAVRALVQSTCNATTYYDLCVAALVADPAS 335 A +T+ + A G N +K G A+++S+C++T Y DLC +A+ A P + Sbjct: 33 ALFATLLVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEA 92 Query: 336 S 338 S Sbjct: 93 S 93
>PME1_CITSI (O04886) Pectinesterase-1 precursor (EC 3.1.1.11) (Pectin| methylesterase) (PE) Length = 584 Score = 35.4 bits (80), Expect = 0.081 Identities = 19/61 (31%), Positives = 32/61 (52%) Frame = +3 Query: 156 ATASTVPTIPAQPGKPNSNNKQKQGGAPAGPAVRALVQSTCNATTYYDLCVAALVADPAS 335 A +T+ + A G N +K G A+++S+C++T Y DLC +A+ A P + Sbjct: 33 ALFATLLVVAAVIGIVAGVNSRKNSGDNGNEPHHAILKSSCSSTRYPDLCFSAIAAVPEA 92 Query: 336 S 338 S Sbjct: 93 S 93
>PMEI_ACTCH (P83326) Pectinesterase inhibitor (Pectin methylesterase inhibitor)| (PMEI) Length = 152 Score = 31.6 bits (70), Expect = 1.2 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +3 Query: 261 LVQSTCNATTYYDLCVAALVADPASSTADLRGL 359 L+ C T LC+ AL +DP S++ DL+GL Sbjct: 4 LISEICPKTRNPSLCLQALESDPRSASKDLKGL 36
>TEGU_EHV1B (P28955) Large tegument protein| Length = 3421 Score = 30.8 bits (68), Expect = 2.0 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = +3 Query: 156 ATASTVPTIPAQPGKPNSNNKQKQGGAPAGPAVRALVQSTCNATT 290 A + PT+P P P S +K G P P L QST A + Sbjct: 2583 AASGPPPTLPPAPPLPQSTSKAASGPPPTLPPAPPLPQSTSKAAS 2627 Score = 30.8 bits (68), Expect = 2.0 Identities = 16/45 (35%), Positives = 20/45 (44%) Frame = +3 Query: 156 ATASTVPTIPAQPGKPNSNNKQKQGGAPAGPAVRALVQSTCNATT 290 A + PT+P P P S +K G P P L QST A + Sbjct: 2562 AASGPPPTLPPAPPLPQSTSKAASGPPPTLPPAPPLPQSTSKAAS 2606 Score = 30.0 bits (66), Expect = 3.4 Identities = 15/39 (38%), Positives = 18/39 (46%) Frame = +3 Query: 174 PTIPAQPGKPNSNNKQKQGGAPAGPAVRALVQSTCNATT 290 PT+P P P S +K G P P L QST A + Sbjct: 2547 PTLPPAPPLPQSTSKAASGPPPTLPPAPPLPQSTSKAAS 2585
>LMD1_HUMAN (P29536) Leiomodin-1 (Leiomodin, muscle form) (64 kDa autoantigen| D1) (64 kDa autoantigen 1D) (64 kDa autoantigen 1D3) (Thyroid-associated ophthalmopathy autoantigen) (Smooth muscle leiomodin) (SM-Lmod) Length = 572 Score = 30.4 bits (67), Expect = 2.6 Identities = 14/34 (41%), Positives = 17/34 (50%) Frame = +3 Query: 147 AGAATASTVPTIPAQPGKPNSNNKQKQGGAPAGP 248 AGA + P KP+ N K+GGAPA P Sbjct: 473 AGAVAKGSPKPSPQPSPKPSPKNSPKKGGAPAAP 506
>PLS_STAES (Q8CQD9) Accumulation-associated protein precursor| Length = 1469 Score = 29.3 bits (64), Expect = 5.8 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +3 Query: 174 PTIPAQPGKPNSNNKQKQGGAPAGPAVRA 260 P PA+PGKP K + G PA P A Sbjct: 1359 PGTPAEPGKPAEPGKPAEPGKPAEPGTPA 1387 Score = 28.5 bits (62), Expect = 9.9 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +3 Query: 174 PTIPAQPGKPNSNNKQKQGGAPAGPAVRA 260 P PA+PGKP K + G PA P A Sbjct: 1335 PGKPAEPGKPAEPGKPAEPGKPAEPGTPA 1363 Score = 28.5 bits (62), Expect = 9.9 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = +3 Query: 174 PTIPAQPGKPNSNNKQKQGGAPAGP 248 P PA+PGKP K + G PA P Sbjct: 1323 PGTPAEPGKPAEPGKPAEPGKPAEP 1347 Score = 28.5 bits (62), Expect = 9.9 Identities = 13/29 (44%), Positives = 15/29 (51%) Frame = +3 Query: 174 PTIPAQPGKPNSNNKQKQGGAPAGPAVRA 260 P PA+PGKP K + G PA P A Sbjct: 1299 PGKPAEPGKPAEPGKPAEPGKPAEPGTPA 1327
>KLF14_HUMAN (Q8TD94) Krueppel-like factor 14 (Transcription factor BTEB5)| (Basic transcription element-binding protein 5) (BTE-binding protein 5) Length = 323 Score = 29.3 bits (64), Expect = 5.8 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +3 Query: 132 SVVCTAGAATASTVPTIPAQPGKPNSNNKQKQGGAPAGPAVRA 260 +V ++ A VP+ PA PG P ++ G AGPA A Sbjct: 137 AVCAPESSSDAPAVPSAPAAPGAPAASGGFSGGALGAGPAPAA 179
>FTSK_STRCO (O86810) DNA translocase ftsK| Length = 917 Score = 29.3 bits (64), Expect = 5.8 Identities = 15/38 (39%), Positives = 20/38 (52%) Frame = +3 Query: 159 TASTVPTIPAQPGKPNSNNKQKQGGAPAGPAVRALVQS 272 T + VP QPGK + + GG PAG AV L ++ Sbjct: 370 TPTPVPAARPQPGKLKKDATKAAGGEPAGGAVPDLTKT 407
>CSKI2_MOUSE (Q8VHK1) Caskin-2| Length = 1201 Score = 29.3 bits (64), Expect = 5.8 Identities = 26/97 (26%), Positives = 39/97 (40%) Frame = +3 Query: 54 PRDSMATMAPSHAXXXXXXXXXXXXXSVVCTAGAATASTVPTIPAQPGKPNSNNKQKQGG 233 P + ++T AP SV+ + G + AS++ ++ PG P G Sbjct: 1014 PSNPLSTQAPCDPPSASSNPPQRSEPSVLPSQGTS-ASSLSSVTQSPGHP---------G 1063 Query: 234 APAGPAVRALVQSTCNATTYYDLCVAALVADPASSTA 344 AGPA+ S N T AAL+ P + TA Sbjct: 1064 PSAGPALANSTGSKPNVETEPPAPPAALLKVPGAGTA 1100
>PCDA2_PANTR (Q5DRF0) Protocadherin alpha 2 precursor (PCDH-alpha2)| Length = 948 Score = 28.9 bits (63), Expect = 7.6 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 Query: 2 PIHSCASSEALHTLVTVTERQHGNNGALTC 91 PI AS + L+TV++R G NG +TC Sbjct: 358 PISENASLGTVIALITVSDRDSGTNGHVTC 387
>PCDA2_HUMAN (Q9Y5H9) Protocadherin alpha 2 precursor (PCDH-alpha2)| Length = 948 Score = 28.9 bits (63), Expect = 7.6 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +2 Query: 2 PIHSCASSEALHTLVTVTERQHGNNGALTC 91 PI AS + L+TV++R G NG +TC Sbjct: 358 PISENASLGTVIALITVSDRDSGTNGHVTC 387
>PCDAD_PANTR (Q5DRF1) Protocadherin alpha 13 precursor (PCDH-alpha13)| Length = 950 Score = 28.5 bits (62), Expect = 9.9 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +2 Query: 2 PIHSCASSEALHTLVTVTERQHGNNGALTC 91 PI A+ L++V++R G+NG +TC Sbjct: 358 PIREDTQPSAIIALISVSDRDSGSNGQVTC 387
>PCDAD_HUMAN (Q9Y5I0) Protocadherin alpha 13 precursor (PCDH-alpha13)| Length = 950 Score = 28.5 bits (62), Expect = 9.9 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = +2 Query: 2 PIHSCASSEALHTLVTVTERQHGNNGALTC 91 PI A+ L++V++R G+NG +TC Sbjct: 358 PIREDTQPSAIIALISVSDRDSGSNGQVTC 387 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,512,631 Number of Sequences: 219361 Number of extensions: 484038 Number of successful extensions: 2350 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1979 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2336 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3362826254 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
