| Clone Name | baet66b11 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X91660.1|HVPM2GENE H.vulgare mRNA for xyloglucan endotransglycosylase-like protein Length = 1110 Score = 823 bits (415), Expect = 0.0 Identities = 433/439 (98%) Strand = Plus / Plus Query: 51 ggcggcgaccatggcgccaaggtcagacctcctcgccgcgctagcgttggccctcctcgc 110 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 16 ggcggcgaccatggcgccaaggtcagacctcctcgccgcgctggcgttggccctcctcgc 75 Query: 111 cgcgagcgtccttagtacgggggccaaggccgacttcgacgaccagttcgaggtgatcgg 170 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 76 cgcgagcgtccttagtacgggggccaaggccgacttcgacgaccagttcgaggtgatcgg 135 Query: 171 cgaccgcgaccacatcgggtaccgggacgacggcaacgacaagggccaggagttctcgct 230 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 136 cgaccgcgaccacatcgggtaccgggacgacggcaacgacaaggggcaggagttctcgct 195 Query: 231 ggagctcgaccaggagtccggctccggcttcaagtccaaggccaagtacctcttcggcga 290 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 196 ggagctcgaccaggagtccggctccggcttcaagtccaaggccaagtacctcttcggcga 255 Query: 291 gttccaggtccggatgaagctcgtcgacggcaactccgccggcaccgtcacctccttcta 350 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 256 gttccaggtccggatgaagctcgtcgacggcaactccgccggcaccgtcacctccttcta 315 Query: 351 cctgacctccggcgagagcgccacccacgacgagatcgacatcgagttcatgggaaactc 410 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 316 cctgacctccggcgagagcgccacccacgacgagatcgacatcgagttcatgggcaactc 375 Query: 411 gagcggcgacccctacgtgatgaacaccaacgtctgggccagcggcgacgggcagaagga 470 ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 376 gagcggcgacccctacgtgatgaacaccaacgtgtgggccagcggcgacggcaagaagga 435 Query: 471 gcaccagttctacctctgg 489 ||||||||||||||||||| Sbjct: 436 gcaccagttctacctctgg 454
>gb|AY589588.1| Triticum aestivum endotransglucosylase/hydrolase XTH4 mRNA, complete cds Length = 1100 Score = 622 bits (314), Expect = e-175 Identities = 350/362 (96%) Strand = Plus / Plus Query: 128 cgggggccaaggccgacttcgacgaccagttcgaggtgatcggcgaccgcgaccacatcg 187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 102 cgggggccaaggccgacttcgacgaccagttcgaggtgatcggcgaccgcgaccacatcg 161 Query: 188 ggtaccgggacgacggcaacgacaagggccaggagttctcgctggagctcgaccaggagt 247 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 162 ggtaccgggacgacggcaaggacaagggccaggagttctcgctggagctcgaccaggagt 221 Query: 248 ccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatga 307 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct: 222 ccggctccggcttcaagtccaaggccaagtacctcttcggcgagttcgaggtcaagatga 281 Query: 308 agctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgaga 367 |||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| Sbjct: 282 agctcgtcgacggcaactccgccggcacagtcacctccttctacctgacttccggcgaga 341 Query: 368 gcgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacg 427 |||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct: 342 gcgcgacccacgacgagatcgacatcgagttcatgggcaactccagcggcgacccctacg 401 Query: 428 tgatgaacaccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacctct 487 |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 402 tgatgaacaccaacgtgtgggccagcggcgacggcaagaaggagcaccagttctacctct 461 Query: 488 gg 489 || Sbjct: 462 gg 463
>emb|AJ295944.1|FPR295944 Festuca pratensis mRNA for Xet2 protein Length = 1189 Score = 428 bits (216), Expect = e-117 Identities = 320/354 (90%), Gaps = 3/354 (0%) Strand = Plus / Plus Query: 136 aaggccgacttcgacgaccagttcgaggtgatcggcgaccgcgaccacatcgggtaccgg 195 ||||||||||||||||||||||| |||||||| |||||||| ||||||||||||||| | Sbjct: 121 aaggccgacttcgacgaccagtttgaggtgattggcgaccgtgaccacatcgggtacaag 180 Query: 196 gacgacggcaacgacaagggccaggagttctcgctggagctcgaccaggagtccggctcc 255 ||||||||||||| | || ||||||||||| ||||||||||||||||| ||||||||| Sbjct: 181 gacgacggcaacggc---gggcaggagttctctctggagctcgaccaggaatccggctcc 237 Query: 256 ggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcgtc 315 |||||||| |||||| |||||||||||||||||||||| |||||||||||||||||| Sbjct: 238 ggcttcaaatccaagaacaagtacctcttcggcgagttcagcgtccggatgaagctcgtc 297 Query: 316 gacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgccacc 375 ||||||||||||||||||||||||||||||||||| ||||| ||||| || ||| ||| Sbjct: 298 gacggcaactccgccggcaccgtcacctccttctatctgacgtccggggaaagcagtacc 357 Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatgaac 435 ||||| ||||||||||| ||||||||||| ||||||||||| | ||||||||||||||| Sbjct: 358 cacgatgagatcgacattgagttcatggggaactcgagcgggcagccctacgtgatgaac 417 Query: 436 accaacgtctgggccagcggcgacgggcagaaggagcaccagttctacctctgg 489 |||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 418 accaacgtgtgggccagcggcgacggcaagaaggagcaccagttctacctctgg 471
>emb|X93173.1|HVXETPM5 H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (PM5) Length = 1188 Score = 287 bits (145), Expect = 2e-74 Identities = 217/241 (90%) Strand = Plus / Plus Query: 249 cggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaa 308 |||||||||||||| ||||||| ||||||||||| |||||||||| |||| |||||| Sbjct: 238 cggctccggcttcagctccaaggacaagtacctctacggcgagttcagcgtccagatgaa 297 Query: 309 gctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagag 368 |||| ||| ||||||||||||||||||||||||||||||||||||||| || || ||| | Sbjct: 298 gctcatcggcggcaactccgccggcaccgtcacctccttctacctgacgtctggggaggg 357 Query: 369 cgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgt 428 || | ||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 358 cgacggccatgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctacgt 417 Query: 429 gatgaacaccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacctctg 488 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 418 gatgaacaccaacgtctgggccagcggcgacggcaagaaggagcaccagttctacctctg 477 Query: 489 g 489 | Sbjct: 478 g 478
>gb|AY589586.1| Triticum aestivum endotransglucosylase/hydrolase XTH2 mRNA, complete cds Length = 1107 Score = 287 bits (145), Expect = 2e-74 Identities = 217/241 (90%) Strand = Plus / Plus Query: 249 cggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaa 308 |||||||||||||| ||||||| ||||||||||| |||||||||| |||| |||||| Sbjct: 227 cggctccggcttcagctccaaggacaagtacctctacggcgagttcagcgtccagatgaa 286 Query: 309 gctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagag 368 |||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| | Sbjct: 287 gctcatcggcggcaactccgccggcaccgtcacctccttctacctgacgtccggggaggg 346 Query: 369 cgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgt 428 || | ||||||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 347 cgacgggcacgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctacgt 406 Query: 429 gatgaacaccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacctctg 488 ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 407 gatgaacaccaacgtgtgggccagcggcgacggcaagaaggagcaccagttctacctctg 466 Query: 489 g 489 | Sbjct: 467 g 467
>gb|AY589587.1| Triticum aestivum endotransglucosylase/hydrolase XTH3 mRNA, complete cds Length = 938 Score = 280 bits (141), Expect = 4e-72 Identities = 216/241 (89%) Strand = Plus / Plus Query: 249 cggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaa 308 |||||||||||||| ||||||| ||||||||||| |||||||||| |||| |||||| Sbjct: 226 cggctccggcttcagctccaaggacaagtacctctacggcgagttcagcgtccagatgaa 285 Query: 309 gctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagag 368 |||| ||| ||||||||||||||||||||||||||||||||||||||| || || ||| | Sbjct: 286 gctcatcggcggcaactccgccggcaccgtcacctccttctacctgacgtctggggaggg 345 Query: 369 cgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgt 428 || | ||| |||||||||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 346 cgacggccatgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctacgt 405 Query: 429 gatgaacaccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacctctg 488 ||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||| Sbjct: 406 gatgaacaccaacgtgtgggccggcggcgacgggaagaaggagcaccagttctacctctg 465 Query: 489 g 489 | Sbjct: 466 g 466
>gb|AY589585.1| Triticum aestivum endotransglucosylase/hydrolase XTH1 mRNA, complete cds Length = 958 Score = 280 bits (141), Expect = 4e-72 Identities = 216/241 (89%) Strand = Plus / Plus Query: 249 cggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaa 308 |||||||||||||| ||||||| ||||||||||| |||||||||| |||| |||||| Sbjct: 227 cggctccggcttcagctccaaggacaagtacctctacggcgagttcagcgtccagatgaa 286 Query: 309 gctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagag 368 |||| ||| ||||||||||||||||||||||||||||||||||||||| ||||| ||| | Sbjct: 287 gctcatcggcggcaactccgccggcaccgtcacctccttctacctgacgtccggggaggg 346 Query: 369 cgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgt 428 || | ||||||||||||||||||||||||||||| ||| |||||||||||||| || Sbjct: 347 cgacgggcacgacgagatcgacatcgagttcatgggcaacctcagcggcgacccctatgt 406 Query: 429 gatgaacaccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacctctg 488 ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 407 gatgaacaccaacgtgtgggccagcggcgacggcaagaaggagcaccagttctacctctg 466 Query: 489 g 489 | Sbjct: 467 g 467
>ref|XM_507172.1| PREDICTED Oryza sativa (japonica cultivar-group), P0682A06.17 mRNA Length = 1127 Score = 244 bits (123), Expect = 2e-61 Identities = 213/243 (87%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 224 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 283 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 366 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 343 Query: 367 agcgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 426 ||| | |||||||||||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 344 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 403 Query: 427 gtgatgaacaccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacctc 486 || |||||||||||||||||||| | |||||||| ||||||||||||||||||||||| Sbjct: 404 gtcatgaacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctc 463 Query: 487 tgg 489 ||| Sbjct: 464 tgg 466
>ref|XM_480868.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1111 Score = 244 bits (123), Expect = 2e-61 Identities = 213/243 (87%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 229 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 288 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 366 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 348 Query: 367 agcgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 426 ||| | |||||||||||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 349 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 408 Query: 427 gtgatgaacaccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacctc 486 || |||||||||||||||||||| | |||||||| ||||||||||||||||||||||| Sbjct: 409 gtcatgaacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctc 468 Query: 487 tgg 489 ||| Sbjct: 469 tgg 471
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 244 bits (123), Expect = 2e-61 Identities = 213/243 (87%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 8321897 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 8321956 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 366 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 8321957 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 8322016 Query: 367 agcgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 426 ||| | |||||||||||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 8322017 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 8322076 Query: 427 gtgatgaacaccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacctc 486 || |||||||||||||||||||| | |||||||| ||||||||||||||||||||||| Sbjct: 8322077 gtcatgaacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctc 8322136 Query: 487 tgg 489 ||| Sbjct: 8322137 tgg 8322139 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Minus Query: 304 atgaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 |||| |||||||| | |||||||||||||||||||||| || ||||| Sbjct: 8379189 atgatgctcgtcgccaacaactccgccggcaccgtcaccaccctctac 8379142
>dbj|AB110604.1| Oryza sativa (japonica cultivar-group) OsXRT5 mRNA for xyloglucan endotransglycosylase-related protein 5, complete cds Length = 1280 Score = 244 bits (123), Expect = 2e-61 Identities = 213/243 (87%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 220 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 279 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 366 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 280 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 339 Query: 367 agcgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 426 ||| | |||||||||||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 340 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 399 Query: 427 gtgatgaacaccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacctc 486 || |||||||||||||||||||| | |||||||| ||||||||||||||||||||||| Sbjct: 400 gtcatgaacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctc 459 Query: 487 tgg 489 ||| Sbjct: 460 tgg 462
>dbj|AP004705.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0682A06 Length = 142023 Score = 244 bits (123), Expect = 2e-61 Identities = 213/243 (87%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 62006 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 62065 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 366 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 62066 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 62125 Query: 367 agcgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 426 ||| | |||||||||||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 62126 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 62185 Query: 427 gtgatgaacaccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacctc 486 || |||||||||||||||||||| | |||||||| ||||||||||||||||||||||| Sbjct: 62186 gtcatgaacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctc 62245 Query: 487 tgg 489 ||| Sbjct: 62246 tgg 62248 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Minus Query: 304 atgaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 |||| |||||||| | |||||||||||||||||||||| || ||||| Sbjct: 119298 atgatgctcgtcgccaacaactccgccggcaccgtcaccaccctctac 119251
>dbj|AK104451.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-F05, full insert sequence Length = 1111 Score = 244 bits (123), Expect = 2e-61 Identities = 213/243 (87%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 229 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 288 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 366 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 289 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 348 Query: 367 agcgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 426 ||| | |||||||||||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 349 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 408 Query: 427 gtgatgaacaccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacctc 486 || |||||||||||||||||||| | |||||||| ||||||||||||||||||||||| Sbjct: 409 gtcatgaacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctc 468 Query: 487 tgg 489 ||| Sbjct: 469 tgg 471
>dbj|AK060654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H12, full insert sequence Length = 1127 Score = 244 bits (123), Expect = 2e-61 Identities = 213/243 (87%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 ||||| ||||| |||| ||||||| || ||||| |||||||||||| |||| |||| Sbjct: 224 tccgggtccgggttcacctccaaggacacctacctgttcggcgagttcagcgtccagatg 283 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 366 |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 284 aagctcgtcggcggcaactccgccggcaccgtcacctccttctacctctcctccggcgag 343 Query: 367 agcgccacccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 426 ||| | |||||||||||||||||||||||||||||| ||| |||||| |||||||| Sbjct: 344 ggcgacggccacgacgagatcgacatcgagttcatgggcaacctcagcggcaacccctac 403 Query: 427 gtgatgaacaccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacctc 486 || |||||||||||||||||||| | |||||||| ||||||||||||||||||||||| Sbjct: 404 gtcatgaacaccaacgtctgggctaatggcgacggcaagaaggagcaccagttctacctc 463 Query: 487 tgg 489 ||| Sbjct: 464 tgg 466
>gb|BT017812.1| Zea mays clone EL01N0507B07.c mRNA sequence Length = 1156 Score = 165 bits (83), Expect = 2e-37 Identities = 196/231 (84%), Gaps = 2/231 (0%) Strand = Plus / Plus Query: 256 ggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcgtc 315 |||||||| |||| | |||||||||||||||||||||| || ||||||||||||| Sbjct: 133 ggcttcaactccacgcgcaagtacctcttcggcgagttcagcgtggagatgaagctcgtc 192 Query: 316 gacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgccacc 375 | |||||||||||| || || |||||||||||||||||||| ||||||||| ||| | Sbjct: 193 ggcggcaactccgctgggactgtcacctccttctacctgacgtccggcgagggcgacgag 252 Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac-gtgatgaa 434 ||||||||||||||||| ||||||||||| ||||| |||||| |||| || ||| | || Sbjct: 253 cacgacgagatcgacatggagttcatgggcaactccagcggc-tccccgacggtgctcaa 311 Query: 435 caccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacct 485 ||| ||||| ||||||| ||||||||| | |||||||||||||||||||| Sbjct: 312 cacgaacgtgtgggccaacggcgacggcaataaggagcaccagttctacct 362
>gb|AY105107.1| Zea mays PCO140468 mRNA sequence Length = 1297 Score = 141 bits (71), Expect = 2e-30 Identities = 192/231 (83%), Gaps = 11/231 (4%) Strand = Plus / Plus Query: 256 ggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcgtc 315 |||||||| |||| | |||||||||||||||||||||| || ||||||||||||| Sbjct: 306 ggcttcaactccacgcgcaagtacctcttcggcgagttcagcgtggagatgaagctcgtc 365 Query: 316 gacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgccacc 375 | |||||||||||| || || |||||||||||||||||||| ||||||||| | Sbjct: 366 ggcggcaactccgctgggactgtcacctccttctacctgacgtccggcgaggg------- 418 Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac-gtgatgaa 434 ||||||||||||||| ||||||||||| ||||| |||||| |||| || ||| | || Sbjct: 419 --cgacgagatcgacatggagttcatgggcaactccagcggc-tccccgacggtgctcaa 475 Query: 435 caccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacct 485 ||| ||||| ||||||| ||||||||| |||||||||||||||||||||| Sbjct: 476 cacgaacgtgtgggccaacggcgacggcaagaaggagcaccagttctacct 526
>emb|AJ875021.1| Zea mays mRNA for xyloglucan endo-transglycosylase/hydrolase (xth1 gene), cultivated variety W64A Length = 1225 Score = 135 bits (68), Expect = 2e-28 Identities = 194/236 (82%) Strand = Plus / Plus Query: 254 ccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcg 313 |||||||||| ||||||| ||||||| | |||||||||| |||| |||||||||| Sbjct: 275 ccggcttcaactccaaggagcagtacctgtacggcgagttcagcgtccagatgaagctca 334 Query: 314 tcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgcca 373 || |||||||||||||||||||||| | | ||||||||| | || ||||| ||| | Sbjct: 335 tccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacggcgacg 394 Query: 374 cccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatga 433 ||||||||||||||||| ||||||||||| ||| ||||||| | || ||| ||| Sbjct: 395 ggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtggtgctga 454 Query: 434 acaccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacctctgg 489 |||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 455 acacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctctgg 510
>gb|AY107002.1| Zea mays PCO111646 mRNA sequence Length = 776 Score = 135 bits (68), Expect = 2e-28 Identities = 194/236 (82%) Strand = Plus / Plus Query: 254 ccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcg 313 |||||||||| ||||||| ||||||| | |||||||||| |||| |||||||||| Sbjct: 300 ccggcttcaactccaaggagcagtacctgtacggcgagttcagcgtccagatgaagctca 359 Query: 314 tcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgcca 373 || |||||||||||||||||||||| | | ||||||||| | || ||||| ||| | Sbjct: 360 tccccggcaactccgccggcaccgtctcgtgcttctacctctcgtcgggcgacggcgacg 419 Query: 374 cccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatga 433 ||||||||||||||||| ||||||||||| ||| ||||||| | || ||| ||| Sbjct: 420 ggcacgacgagatcgacatggagttcatgggcaacgcgagcgggcagccggtggtgctga 479 Query: 434 acaccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacctctgg 489 |||| ||||| ||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 480 acacgaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctctgg 535
>gb|AY106744.1| Zea mays PCO111647 mRNA sequence Length = 1267 Score = 127 bits (64), Expect = 4e-26 Identities = 193/236 (81%) Strand = Plus / Plus Query: 254 ccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatgaagctcg 313 |||||||||| ||||||| ||||||| | |||||||||| ||| |||||||||| Sbjct: 271 ccggcttcaactccaaggagcagtacctttacggcgagttcagcgtcgagatgaagctca 330 Query: 314 tcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgcca 373 || || |||||||||||||||||| | | ||||||||| | |||||||| ||| | Sbjct: 331 tccgggggaactccgccggcaccgtctcgtgcttctacctctcttccggcgacggcgacg 390 Query: 374 cccacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatga 433 | ||||||||||||||| ||||||||||| ||||||||||| | || ||| ||| Sbjct: 391 ggcgcgacgagatcgacatggagttcatgggcaactcgagcgggcagccggtggtgctga 450 Query: 434 acaccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacctctgg 489 |||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| Sbjct: 451 acaccaacgtgtgggccagcggcgacggcaagaaggagcaccagttcgacctctgg 506
>gb|AY106262.1| Zea mays PCO111648 mRNA sequence Length = 1257 Score = 117 bits (59), Expect = 4e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 319 ggcaactccgccggcaccgtcacctccttctacctgacctccggcgagagcgccacccac 378 ||||||||||| |||||||| ||||||||||||||| | || ||||| | || ||| Sbjct: 379 ggcaactccgcgggcaccgtgacctccttctacctgtcgtcgggcgacgggcccgggcac 438 Query: 379 gacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatgaacacc 438 |||||||||||||| ||||||||||| ||| | ||||| | ||| ||| |||||||| Sbjct: 439 gacgagatcgacatggagttcatgggcaacgccagcgggcagcccgtggtgctgaacacc 498 Query: 439 aacgtctgggccagcggcgacgggcagaaggagcaccagttctacct 485 ||||| ||||||| ||||||||| |||||||||||||||||||||| Sbjct: 499 aacgtgtgggccaacggcgacggcaagaaggagcaccagttctacct 545
>emb|X93175.1|HVXETXEB H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEB) Length = 1226 Score = 95.6 bits (48), Expect = 1e-16 Identities = 93/108 (86%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 ||||||||||||||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 266 tccggctccggcttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 325 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 354 ||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 326 aagctcgtccccggcaactccgccggcaccgtcaccaccttctacctg 373 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatggg 404 ||||||||||||||| |||||||| |||| Sbjct: 392 cacgacgagatcgacttcgagttcctggg 420
>gb|AY589589.1| Triticum aestivum endotransglucosylase/hydrolase XTH5 mRNA, complete cds Length = 1056 Score = 95.6 bits (48), Expect = 1e-16 Identities = 93/108 (86%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 ||||||||||||||| |||||||| || | |||||||||||| || || | | | ||| Sbjct: 160 tccggctccggcttccagtccaagaccgaatacctcttcggcaagatcgacatgcagatc 219 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 354 ||||||||| ||||||||||||||||||||||||| ||||||||||| Sbjct: 220 aagctcgtccccggcaactccgccggcaccgtcaccaccttctacctg 267 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatggg 404 ||||||||||||||| |||||||| |||| Sbjct: 286 cacgacgagatcgacttcgagttcctggg 314
>gb|BT017380.1| Zea mays clone EL01N0326D06.c mRNA sequence Length = 781 Score = 77.8 bits (39), Expect = 3e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 431 tgaacaccaacgtctgggccagcggcgacgggcagaaggagcaccagttctacct 485 ||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| Sbjct: 13 tgaacaccaacgtgtgggccaacggcgacggctagaaggagcaccagttctacct 67
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 28749714 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 28749773 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 ||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 28749774 aagctcgtccccggcaactccgccggcaccgtcaccaccttctac 28749818 Score = 60.0 bits (30), Expect = 7e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 246 gtccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggat 305 |||||||||||||||| |||||||| | ||||||| | |||| ||| | | | ||| Sbjct: 28761493 gtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacatgcagat 28761552 Query: 306 gaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 ||||||||| |||||||||||||||||||||| || |||||||| Sbjct: 28761553 caagctcgtccccggcaactccgccggcaccgtcgccaccttctac 28761598 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 ||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 28773893 aagctcgtccccggcaactccgccggcaccgtcaccgcctactac 28773849 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcggcga 419 ||||||||||||||| |||||||| |||| ||| |||||||||| Sbjct: 28761710 cacgacgagatcgacttcgagttcctggggaacgcgagcggcga 28761753 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 426 ||||||||||||||| |||||||| |||| ||||| |||||| ||||||| Sbjct: 13230402 cacgacgagatcgacttcgagttcctgggcaactccagcggcctcccctac 13230452 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 319 ggcaactccgccggcaccgtcacctccttctac 351 |||||||| ||||||||||||||| ||| |||| Sbjct: 13230243 ggcaactcggccggcaccgtcaccacctactac 13230275
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0028E05 Length = 157631 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 57489 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 57548 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 ||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 57549 aagctcgtccccggcaactccgccggcaccgtcaccaccttctac 57593 Score = 60.0 bits (30), Expect = 7e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 246 gtccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggat 305 |||||||||||||||| |||||||| | ||||||| | |||| ||| | | | ||| Sbjct: 69268 gtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacatgcagat 69327 Query: 306 gaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 ||||||||| |||||||||||||||||||||| || |||||||| Sbjct: 69328 caagctcgtccccggcaactccgccggcaccgtcgccaccttctac 69373 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 ||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 81668 aagctcgtccccggcaactccgccggcaccgtcaccgcctactac 81624 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcggcga 419 ||||||||||||||| |||||||| |||| ||| |||||||||| Sbjct: 69485 cacgacgagatcgacttcgagttcctggggaacgcgagcggcga 69528
>dbj|AP003771.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0622F03 Length = 170064 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 150280 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 150339 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 ||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 150340 aagctcgtccccggcaactccgccggcaccgtcaccaccttctac 150384 Score = 60.0 bits (30), Expect = 7e-06 Identities = 87/106 (82%) Strand = Plus / Plus Query: 246 gtccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggat 305 |||||||||||||||| |||||||| | ||||||| | |||| ||| | | | ||| Sbjct: 162059 gtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacatgcagat 162118 Query: 306 gaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 ||||||||| |||||||||||||||||||||| || |||||||| Sbjct: 162119 caagctcgtccccggcaactccgccggcaccgtcgccaccttctac 162164 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcggcga 419 ||||||||||||||| |||||||| |||| ||| |||||||||| Sbjct: 162276 cacgacgagatcgacttcgagttcctggggaacgcgagcggcga 162319
>dbj|AK104912.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C02, full insert sequence Length = 1208 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 262 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 321 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 ||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 322 aagctcgtccccggcaactccgccggcaccgtcaccaccttctac 366
>dbj|AK066125.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013059H08, full insert sequence Length = 1208 Score = 73.8 bits (37), Expect = 5e-10 Identities = 88/105 (83%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 262 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 321 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 ||||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 322 aagctcgtccccggcaactccgccggcaccgtcaccaccttctac 366
>ref|XM_473793.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 966 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatgaac 435 ||||||||||||||| |||||||| |||| ||| ||||||||| || ||||||||| || Sbjct: 337 cacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgcac 396 Query: 436 accaacgt 443 |||||||| Sbjct: 397 accaacgt 404 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttc 294 ||||||||||| ||| ||||||||| | ||| |||||||||||||||| Sbjct: 211 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttc 258
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatgaac 435 ||||||||||||||| |||||||| |||| ||| ||||||||| || ||||||||| || Sbjct: 32713 cacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgcac 32654 Query: 436 accaacgt 443 |||||||| Sbjct: 32653 accaacgt 32646 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttc 294 ||||||||||| ||| ||||||||| | ||| |||||||||||||||| Sbjct: 32994 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttc 32947
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Minus Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatgaac 435 ||||||||||||||| |||||||| |||| ||| ||||||||| || ||||||||| || Sbjct: 30557005 cacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgcac 30556946 Query: 436 accaacgt 443 |||||||| Sbjct: 30556945 accaacgt 30556938 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttc 294 ||||||||||| ||| ||||||||| | ||| |||||||||||||||| Sbjct: 30557286 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttc 30557239 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Minus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacc 342 |||||||||| || | |||||||||||||||||||| Sbjct: 30508603 aagctcgtcgccgacgactccgccggcaccgtcacc 30508568 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 |||||||||| | ||||||||||||||| |||||| ||| |||| Sbjct: 30517192 aagctcgtcgccaacaactccgccggcacggtcaccacctgctac 30517148 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 372 cacccacgacgagatcgacatcgagttcatggg 404 ||||||||||||||||||| | |||||| |||| Sbjct: 30508424 cacccacgacgagatcgacctggagttcctggg 30508392 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 315 cgacggcaactccgccggcaccgtc 339 ||||||||| ||||||||||||||| Sbjct: 23253345 cgacggcaagtccgccggcaccgtc 23253369
>dbj|AK071574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023105D14, full insert sequence Length = 977 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 354 |||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 277 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctg 324 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatggg 404 ||||||||||||||| |||||||| |||| Sbjct: 343 cacgacgagatcgacttcgagttcctggg 371
>dbj|AK061093.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-A02, full insert sequence Length = 1053 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 354 |||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 274 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctacctg 321 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatggg 404 ||||||||||||||| |||||||| |||| Sbjct: 340 cacgacgagatcgacttcgagttcctggg 368
>dbj|AK059203.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-A11, full insert sequence Length = 1234 Score = 71.9 bits (36), Expect = 2e-09 Identities = 60/68 (88%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatgaac 435 ||||||||||||||| |||||||| |||| ||| ||||||||| || ||||||||| || Sbjct: 405 cacgacgagatcgacttcgagttcctggggaacgtgagcggcgagccgtacgtgatgcac 464 Query: 436 accaacgt 443 |||||||| Sbjct: 465 accaacgt 472 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttc 294 ||||||||||| ||| ||||||||| | ||| |||||||||||||||| Sbjct: 279 tccggctccgggttccagtccaaggaccagttcctcttcggcgagttc 326
>dbj|D16457.1|WHTEXT4 Wheat mRNA for endo-xyloglucan transferase, complete cds Length = 1088 Score = 71.9 bits (36), Expect = 2e-09 Identities = 45/48 (93%) Strand = Plus / Plus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 354 |||||||||| |||| |||||||||||||||||||| ||||||||||| Sbjct: 287 aagctcgtcggcggcgactccgccggcaccgtcaccgccttctacctg 334 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatggg 404 ||||||||||||||| |||||||| |||| Sbjct: 353 cacgacgagatcgacttcgagttcttggg 381
>gb|BT014685.1| Oryza sativa AK104912 mRNA sequence Length = 807 Score = 65.9 bits (33), Expect = 1e-07 Identities = 87/105 (82%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 |||||||| || ||| |||||||| | |||||||||||||| || || | | | ||| Sbjct: 154 tccggctctgggttccagtccaagagcgagtacctcttcggcaagatcgacatgcagatc 213 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 ||| ||||| ||||||||||||||||||||||||| |||||||| Sbjct: 214 aagttcgtccccggcaactccgccggcaccgtcaccaccttctac 258
>gb|AC134925.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041J17, complete sequence Length = 148829 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 |||||||||| |||| |||||||||||||||||||| |||||||| Sbjct: 113313 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 113357 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatggg 404 ||||||||||||||| |||||||| |||| Sbjct: 113474 cacgacgagatcgacttcgagttcctggg 113502
>gb|AC136481.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0007D07, complete sequence Length = 133930 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 |||||||||| |||| |||||||||||||||||||| |||||||| Sbjct: 12932 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 12976 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatggg 404 ||||||||||||||| |||||||| |||| Sbjct: 13093 cacgacgagatcgacttcgagttcctggg 13121
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 |||||||||| |||| |||||||||||||||||||| |||||||| Sbjct: 19010115 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 19010159 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatggg 404 ||||||||||||||| |||||||| |||| Sbjct: 19010276 cacgacgagatcgacttcgagttcctggg 19010304
>dbj|AK105934.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-B05, full insert sequence Length = 1101 Score = 65.9 bits (33), Expect = 1e-07 Identities = 90/109 (82%) Strand = Plus / Plus Query: 246 gtccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggat 305 |||||||||||||||| |||||||| | ||||||| | |||| ||| | | | ||| Sbjct: 259 gtccggctccggcttccagtccaagaaccagtacctgtacggccgcttcgacatgcagat 318 Query: 306 gaagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 354 ||||||||| |||||||||||||||||||||| || ||||||||||| Sbjct: 319 caagctcgtccccggcaactccgccggcaccgtcgccaccttctacctg 367 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcggcga 419 ||||||||||||||| |||||||| |||| ||| |||||||||| Sbjct: 386 cacgacgagatcgacttcgagttcctggggaacgcgagcggcga 429
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 65.9 bits (33), Expect = 1e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 |||||||||| |||| |||||||||||||||||||| |||||||| Sbjct: 19168764 aagctcgtcgccggcgactccgccggcaccgtcaccgccttctac 19168808 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatggg 404 ||||||||||||||| |||||||| |||| Sbjct: 19168925 cacgacgagatcgacttcgagttcctggg 19168953
>emb|X91659.1|HVEXTGENE H.vulgare mRNA for endoxyloglucan transferase Length = 1175 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 354 |||||||||| |||| ||||||||||||| |||||| ||||||||||| Sbjct: 326 aagctcgtcggcggcgactccgccggcacagtcaccgccttctacctg 373 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatggg 404 ||||||||||||||| |||||||| |||| Sbjct: 392 cacgacgagatcgacttcgagttcttggg 420
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 308 agctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 |||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 10358905 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 10358948 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatggg 404 ||||||||||||||| |||||||| |||| Sbjct: 10359114 cacgacgagatcgacttcgagttcctggg 10359142
>dbj|AP005398.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0669G10 Length = 133372 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 308 agctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 |||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 1327 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 1370 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatggg 404 ||||||||||||||| |||||||| |||| Sbjct: 1536 cacgacgagatcgacttcgagttcctggg 1564
>dbj|AP004872.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0444A09 Length = 125900 Score = 63.9 bits (32), Expect = 5e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 308 agctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 |||||||| ||||||||||||||||||||||||| |||||||| Sbjct: 124715 agctcgtccccggcaactccgccggcaccgtcaccaccttctac 124758 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatggg 404 ||||||||||||||| |||||||| |||| Sbjct: 124924 cacgacgagatcgacttcgagttcctggg 124952
>gb|AY104207.1| Zea mays PCO111099 mRNA sequence Length = 1202 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 304 atgaagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 354 ||||||||||||| |||| ||||||| ||||||||||| ||||||||||| Sbjct: 294 atgaagctcgtcggcggcgactccgcgggcaccgtcacggccttctacctg 344
>dbj|AK120345.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013063H05, full insert sequence Length = 566 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 ||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 339 aagctcgtccccggcaactccgccggcaccgtcaccgcctactac 383
>dbj|AK105513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F01, full insert sequence Length = 1253 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 ||||||||| ||||||||||||||||||||||||| ||| |||| Sbjct: 329 aagctcgtccccggcaactccgccggcaccgtcaccgcctactac 373
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein (XEA) Length = 1174 Score = 56.0 bits (28), Expect = 1e-04 Identities = 88/108 (81%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 ||||||||||| ||| |||||||| | |||||||||||||| || || | | | | | Sbjct: 205 tccggctccgggttccagtccaagcacgagtacctcttcggcaagatcgacatgcagctc 264 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctg 354 ||||||||| ||||||||| ||||||||||| ||| ||| ||||||| Sbjct: 265 aagctcgtccccggcaactctgccggcaccgtaaccgcctactacctg 312 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatgggaaac 408 ||||||||||||||| |||||||| |||||||| Sbjct: 331 cacgacgagatcgacttcgagttcctgggaaac 363
>gb|AY103775.1| Zea mays PCO076979 mRNA sequence Length = 1495 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 319 ggcaactccgccggcaccgtcacctccttctacctg 354 |||||||||||||||||||||||| ||| ||||||| Sbjct: 381 ggcaactccgccggcaccgtcaccgcctactacctg 416
>dbj|AB196976.1| Sagittaria pygmaea SpXTH3 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1273 Score = 54.0 bits (27), Expect = 4e-04 Identities = 122/153 (79%), Gaps = 3/153 (1%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggcgagttccaggtccggatg 306 ||||||||||||||| |||||||| | ||||||||| |||| || || | | | ||| Sbjct: 323 tccggctccggcttccagtccaagaacgagtacctctacggcaagctcgatatgcagatc 382 Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctacctgacctccggcgag 366 ||||| || ||| ||||| ||||||||||||||| |||||||||| | ||| || Sbjct: 383 aagcttgtacccgggaactcagccggcaccgtcaccaccttctacctctcgtccc---ag 439 Query: 367 agcgccacccacgacgagatcgacatcgagttc 399 || ||| |||||||||||||||| |||||||| Sbjct: 440 ggccccaaccacgacgagatcgacttcgagttc 472
>dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0012F14 Length = 168629 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 426 ||||||||||||||| |||||||| |||| ||||| |||||| ||||||| Sbjct: 147590 cacgacgagatcgacttcgagttcctgggcaactccagcggcctcccctac 147640 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 319 ggcaactccgccggcaccgtcacctccttctac 351 |||||||| ||||||||||||||| ||| |||| Sbjct: 147431 ggcaactcggccggcaccgtcaccacctactac 147463
>dbj|AK063497.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-116-D06, full insert sequence Length = 1439 Score = 54.0 bits (27), Expect = 4e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctac 426 ||||||||||||||| |||||||| |||| ||||| |||||| ||||||| Sbjct: 643 cacgacgagatcgacttcgagttcctgggcaactccagcggcctcccctac 693 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 319 ggcaactccgccggcaccgtcacctccttctac 351 |||||||| ||||||||||||||| ||| |||| Sbjct: 589 ggcaactcggccggcaccgtcaccacctactac 621
>gb|AY105365.1| Zea mays PCO092487 mRNA sequence Length = 1253 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggc 288 |||||||| |||||| ||||||||||| ||||||||| |||| Sbjct: 273 tccggctcgggcttccagtccaaggcccagtacctctacggc 314 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcgg 416 ||||||||||||||| |||||||| |||| ||| ||||||| Sbjct: 399 cacgacgagatcgacttcgagttcctggggaacgcgagcgg 439 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 323 actccgccggcaccgtcacctccttcta 350 ||||||||||||||||| || ||||||| Sbjct: 349 actccgccggcaccgtcgccaccttcta 376
>gb|U15964.1|ZMU15964 Zea mays xyloglucan endo-transglycosylase homolog gene, complete cds Length = 1827 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggc 288 |||||||| |||||| ||||||||||| ||||||||| |||| Sbjct: 163 tccggctcgggcttccagtccaaggcccagtacctctacggc 204 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcgg 416 ||||||||||||||| |||||||| |||| ||| ||||||| Sbjct: 414 cacgacgagatcgacttcgagttcctggggaacgcgagcgg 454 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 323 actccgccggcaccgtcacctccttcta 350 ||||||||||||||||| || ||||||| Sbjct: 239 actccgccggcaccgtcgccaccttcta 266
>gb|U15781.1|ZMU15781 Zea mays xyloglucan endo-transglycosylase homolog mRNA, complete cds Length = 1221 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 247 tccggctccggcttcaagtccaaggccaagtacctcttcggc 288 |||||||| |||||| ||||||||||| ||||||||| |||| Sbjct: 280 tccggctcgggcttccagtccaaggcccagtacctctacggc 321 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcgg 416 ||||||||||||||| |||||||| |||| ||| ||||||| Sbjct: 406 cacgacgagatcgacttcgagttcctggggaacgcgagcgg 446 Score = 40.1 bits (20), Expect = 6.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 323 actccgccggcaccgtcacctccttcta 350 ||||||||||||||||| || ||||||| Sbjct: 356 actccgccggcaccgtcgccaccttcta 383
>ref|XM_480875.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Plus Query: 304 atgaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 |||| |||||||| | |||||||||||||||||||||| || ||||| Sbjct: 268 atgatgctcgtcgccaacaactccgccggcaccgtcaccaccctctac 315
>ref|XM_473787.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 882 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Plus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacc 342 |||||||||| || | |||||||||||||||||||| Sbjct: 244 aagctcgtcgccgacgactccgccggcaccgtcacc 279 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 372 cacccacgacgagatcgacatcgagttcatggg 404 ||||||||||||||||||| | |||||| |||| Sbjct: 312 cacccacgacgagatcgacctggagttcctggg 344
>gb|AY023104.1| Oryza sativa microsatellite MRG5429 containing (GAG)X9, genomic sequence Length = 227 Score = 48.1 bits (24), Expect = 0.027 Identities = 42/48 (87%) Strand = Plus / Minus Query: 304 atgaagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 |||| |||||||| | |||||||||||||||||||||| || ||||| Sbjct: 186 atgatgctcgtcgccaacaactccgccggcaccgtcaccaccctctac 139
>emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2 Length = 223670 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 150 cgaccagttcgaggtgatcggcga 173 |||||||||||||||||||||||| Sbjct: 155164 cgaccagttcgaggtgatcggcga 155187
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Plus Query: 150 cgaccagttcgaggtgatcggcga 173 |||||||||||||||||||||||| Sbjct: 500427 cgaccagttcgaggtgatcggcga 500450 Score = 48.1 bits (24), Expect = 0.027 Identities = 24/24 (100%) Strand = Plus / Minus Query: 150 cgaccagttcgaggtgatcggcga 173 |||||||||||||||||||||||| Sbjct: 405174 cgaccagttcgaggtgatcggcga 405151 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 gatgaagctcgtcgacggcaa 323 ||||||||||||||||||||| Sbjct: 1747182 gatgaagctcgtcgacggcaa 1747162
>emb|AL606638.2|OSJN00077 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041A02, complete sequence Length = 166804 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Minus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacc 342 |||||||||| || | |||||||||||||||||||| Sbjct: 141980 aagctcgtcgccgacgactccgccggcaccgtcacc 141945 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Minus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 |||||||||| | ||||||||||||||| |||||| ||| |||| Sbjct: 150569 aagctcgtcgccaacaactccgccggcacggtcaccacctgctac 150525 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 372 cacccacgacgagatcgacatcgagttcatggg 404 ||||||||||||||||||| | |||||| |||| Sbjct: 141801 cacccacgacgagatcgacctggagttcctggg 141769
>dbj|AK099651.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013065F24, full insert sequence Length = 872 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Minus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacc 342 |||||||||| || | |||||||||||||||||||| Sbjct: 307 aagctcgtcgccgacgactccgccggcaccgtcacc 272
>dbj|AK063614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-D08, full insert sequence Length = 1041 Score = 48.1 bits (24), Expect = 0.027 Identities = 33/36 (91%) Strand = Plus / Plus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacc 342 |||||||||| || | |||||||||||||||||||| Sbjct: 307 aagctcgtcgccgacgactccgccggcaccgtcacc 342 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 372 cacccacgacgagatcgacatcgagttcatggg 404 ||||||||||||||||||| | |||||| |||| Sbjct: 375 cacccacgacgagatcgacctggagttcctggg 407
>gb|AY103891.1| Zea mays PCO065722 mRNA sequence Length = 1280 Score = 48.1 bits (24), Expect = 0.027 Identities = 57/68 (83%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgacccctacgtgatgaac 435 ||||||||||||||| |||||||| |||| ||| |||||| || |||||| | || || Sbjct: 417 cacgacgagatcgacttcgagttcctgggcaacgtgagcggggagccctacacgctgcac 476 Query: 436 accaacgt 443 |||||||| Sbjct: 477 accaacgt 484
>ref|XM_958552.1| Neurospora crassa OR74A hypothetical protein ( phenol hydroxylase related protein [imported] - Neurospora crassa OR74A ) (NCU06804.1) partial mRNA Length = 1926 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 267 caaggccaagtacctcttcggcg 289 ||||||||||||||||||||||| Sbjct: 516 caaggccaagtacctcttcggcg 538
>ref|XM_327089.1| Neurospora crassa OR74A hypothetical protein ( phenol hydroxylase related protein [imported] - Neurospora crassa OR74A ) (NCU06804.1) partial mRNA Length = 1926 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 267 caaggccaagtacctcttcggcg 289 ||||||||||||||||||||||| Sbjct: 516 caaggccaagtacctcttcggcg 538
>emb|AL356173.2|NCB14D6 Neurospora crassa DNA linkage group II BAC contig B14D6 Length = 199386 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 267 caaggccaagtacctcttcggcg 289 ||||||||||||||||||||||| Sbjct: 58531 caaggccaagtacctcttcggcg 58553
>gb|DQ100338.1| Eucalyptus globulus putative xyloglucan endotransglycosylase/hydrolase (XTH2) mRNA, partial cds Length = 936 Score = 46.1 bits (23), Expect = 0.11 Identities = 41/47 (87%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatgggaaactcgagcggcgaccc 422 ||||||||||| ||| |||||||| |||| ||| |||||||||||| Sbjct: 51 cacgacgagattgacttcgagttcctggggaacctgagcggcgaccc 97
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 53 cggcgaccatggcgccaaggtca 75 ||||||||||||||||||||||| Sbjct: 883550 cggcgaccatggcgccaaggtca 883528
>ref|NM_187323.1| Oryza sativa (japonica cultivar-group), mRNA Length = 906 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 375 ccacgacgagatcgacatcgagttcatggg 404 |||||||||||||||||| |||||| |||| Sbjct: 360 ccacgacgagatcgacatggagttcctggg 389
>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein Length = 1187 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 325 tccgccggcaccgtcacctccttctacctg 354 |||||||||||||||||| ||| ||||||| Sbjct: 363 tccgccggcaccgtcaccgcctactacctg 392
>gb|AF168681.1| Homo sapiens CRIM1 protein gene, partial cds; and FEZ2 gene, partial sequence Length = 236303 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Plus Query: 341 cctccttctacctgacctccgg 362 |||||||||||||||||||||| Sbjct: 202208 cctccttctacctgacctccgg 202229
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 375 ccacgacgagatcgacatcgagttcatggg 404 |||||||||||||||||| |||||| |||| Sbjct: 17438275 ccacgacgagatcgacatggagttcctggg 17438304
>gb|AC007401.4| Homo sapiens BAC clone RP11-501O7 from 2, complete sequence Length = 83656 Score = 44.1 bits (22), Expect = 0.42 Identities = 22/22 (100%) Strand = Plus / Minus Query: 341 cctccttctacctgacctccgg 362 |||||||||||||||||||||| Sbjct: 60552 cctccttctacctgacctccgg 60531
>dbj|AP004299.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0434A03 Length = 146505 Score = 44.1 bits (22), Expect = 0.42 Identities = 28/30 (93%) Strand = Plus / Plus Query: 375 ccacgacgagatcgacatcgagttcatggg 404 |||||||||||||||||| |||||| |||| Sbjct: 106499 ccacgacgagatcgacatggagttcctggg 106528
>ref|XM_473788.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 822 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 |||||||||| | ||||||||||||||| |||||| ||| |||| Sbjct: 220 aagctcgtcgccaacaactccgccggcacggtcaccacctgctac 264
>ref|XM_472791.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 474 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 315 cgacggcaactccgccggcaccgtc 339 ||||||||| ||||||||||||||| Sbjct: 135 cgacggcaagtccgccggcaccgtc 159
>gb|AY320035.2| Bacteriophage VWB, complete genome Length = 49220 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 157 ttcgaggtgatcggcgaccgcgacc 181 ||||||||| ||||||||||||||| Sbjct: 19260 ttcgaggtgctcggcgaccgcgacc 19284
>gb|AY196994.1| Streptomyces griseoruber heda cluster, complete sequence Length = 45603 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Minus Query: 159 cgaggtgatcggcgaccgcgaccac 183 ||||||| ||||||||||||||||| Sbjct: 30223 cgaggtggtcggcgaccgcgaccac 30199
>gb|AF443603.1|AF443603 Oryza sativa xyloglucan endotransglycosylase mRNA, complete cds Length = 1162 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 |||||||||| | ||||||||||||||| |||||| ||| |||| Sbjct: 292 aagctcgtcgccaacaactccgccggcacggtcaccacctgctac 336
>dbj|AB196975.1| Sagittaria pygmaea SpXTH2 mRNA for xyloglucan endotransglucosylase/hydrolase, partial cds Length = 708 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttcatggg 404 ||||||||||||||| |||||||| |||| Sbjct: 74 cacgacgagatcgacttcgagttcctggg 102
>gb|AE004730.1| Pseudomonas aeruginosa PAO1, section 291 of 529 of the complete genome Length = 20021 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 159 cgaggtgatcggcgaccgcgaccacatcg 187 |||||||||||||| ||||||| |||||| Sbjct: 17835 cgaggtgatcggcgcccgcgactacatcg 17807
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 425 acgtgatgaacaccaacgtctgggccagc 453 ||||| |||||||| |||||||||||||| Sbjct: 3040446 acgtggtgaacaccgacgtctgggccagc 3040418 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 cctccggcgagagcgccacc 375 |||||||||||||||||||| Sbjct: 80401 cctccggcgagagcgccacc 80420
>dbj|AK119676.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-G11, full insert sequence Length = 757 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 315 cgacggcaactccgccggcaccgtc 339 ||||||||| ||||||||||||||| Sbjct: 220 cgacggcaagtccgccggcaccgtc 244
>dbj|AK070734.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B10, full insert sequence Length = 1109 Score = 42.1 bits (21), Expect = 1.7 Identities = 39/45 (86%) Strand = Plus / Plus Query: 307 aagctcgtcgacggcaactccgccggcaccgtcacctccttctac 351 |||||||||| | ||||||||||||||| |||||| ||| |||| Sbjct: 310 aagctcgtcgccaacaactccgccggcacggtcaccacctgctac 354
>dbj|AK059231.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-E05, full insert sequence Length = 753 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 315 cgacggcaactccgccggcaccgtc 339 ||||||||| ||||||||||||||| Sbjct: 216 cgacggcaagtccgccggcaccgtc 240
>emb|AL606653.3|OSJN00104 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0048E02, complete sequence Length = 121337 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 315 cgacggcaactccgccggcaccgtc 339 ||||||||| ||||||||||||||| Sbjct: 91498 cgacggcaagtccgccggcaccgtc 91522
>gb|AC167918.2| Mycosphaerella graminicola clone JGIBBWB-5F7, complete sequence Length = 32954 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgacgagatcgacatcgagt 397 |||||||||||||||||||| Sbjct: 21417 cgacgagatcgacatcgagt 21436
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome Length = 3997420 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ggccaaggccgacttcgacg 151 |||||||||||||||||||| Sbjct: 2170872 ggccaaggccgacttcgacg 2170853
>ref|NM_187550.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 597 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 tgaagctcgtcgacggcaactccg 328 ||||||||| |||||||||||||| Sbjct: 278 tgaagctcgacgacggcaactccg 301
>gb|CP000145.1| Rhodobacter sphaeroides 2.4.1 plasmid B, complete sequence Length = 114178 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 159 cgaggtgatcggcgaccgcg 178 |||||||||||||||||||| Sbjct: 47016 cgaggtgatcggcgaccgcg 46997
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 tgaagctcgtcgacggcaactccg 328 ||||||||| |||||||||||||| Sbjct: 829621 tgaagctcgacgacggcaactccg 829644
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence Length = 2580084 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 ggccaaggccgacttcgacg 151 |||||||||||||||||||| Sbjct: 654195 ggccaaggccgacttcgacg 654176
>ref|XM_387049.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06873.1) partial mRNA Length = 1125 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 378 cgacgagatcgacatcgagt 397 |||||||||||||||||||| Sbjct: 351 cgacgagatcgacatcgagt 370
>gb|AF494052.1| Chlamydomonas reinhardtii thioredoxin reductase TR1 mRNA, complete cds Length = 2941 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 134 ccaaggccgacttcgacgac 153 |||||||||||||||||||| Sbjct: 1563 ccaaggccgacttcgacgac 1582
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ccgccggcaccgtcacctcc 345 |||||||||||||||||||| Sbjct: 18260 ccgccggcaccgtcacctcc 18241
>gb|AC090433.10| Chlamydomonas reinhardtii clone cr-19b23, complete sequence Length = 118183 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 326 ccgccggcaccgtcacctcc 345 |||||||||||||||||||| Sbjct: 78242 ccgccggcaccgtcacctcc 78223
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome Length = 3561584 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 141 cgacttcgacgaccagttcg 160 |||||||||||||||||||| Sbjct: 3175019 cgacttcgacgaccagttcg 3175038
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 tgaagctcgtcgacggcaactccg 328 ||||||||| |||||||||||||| Sbjct: 829619 tgaagctcgacgacggcaactccg 829642
>dbj|AB196978.1| Sagittaria pygmaea SpXTH5 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1029 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 aactccgccggcaccgtcac 341 |||||||||||||||||||| Sbjct: 341 aactccgccggcaccgtcac 360
>dbj|AB196974.1| Sagittaria pygmaea SpXTH1 mRNA for xyloglucan endotransglucosylase/hydrolase, complete cds Length = 1101 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 376 cacgacgagatcgacatcgagttc 399 ||||||||||||||| |||||||| Sbjct: 446 cacgacgagatcgacttcgagttc 469
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tcgctggagctcgaccagga 245 |||||||||||||||||||| Sbjct: 3136434 tcgctggagctcgaccagga 3136453 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 cgccacccacgacgagatcg 388 |||||||||||||||||||| Sbjct: 2262247 cgccacccacgacgagatcg 2262228
>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090O10, complete sequence Length = 162132 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 tgaagctcgtcgacggcaactccg 328 ||||||||| |||||||||||||| Sbjct: 125166 tgaagctcgacgacggcaactccg 125189
>dbj|AK107855.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-B01, full insert sequence Length = 767 Score = 40.1 bits (20), Expect = 6.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 305 tgaagctcgtcgacggcaactccg 328 ||||||||| |||||||||||||| Sbjct: 274 tgaagctcgacgacggcaactccg 297
>dbj|AK067158.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013094M16, full insert sequence Length = 2073 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cttctacctgacctccggcg 364 |||||||||||||||||||| Sbjct: 189 cttctacctgacctccggcg 170
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 380 acgagatcgacatcgagttc 399 |||||||||||||||||||| Sbjct: 110345 acgagatcgacatcgagttc 110364
>dbj|D82039.1| Oryza sativa mRNA for OSK1, complete cds Length = 2209 Score = 40.1 bits (20), Expect = 6.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 345 cttctacctgacctccggcg 364 |||||||||||||||||||| Sbjct: 183 cttctacctgacctccggcg 164 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,395,757 Number of Sequences: 3902068 Number of extensions: 2395757 Number of successful extensions: 50633 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 111 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 49090 Number of HSP's gapped (non-prelim): 1533 length of query: 489 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 467 effective length of database: 17,147,199,772 effective search space: 8007742293524 effective search space used: 8007742293524 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)