ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet66b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY109005.1| Zea mays PCO121752 mRNA sequence 44 0.33
2ref|XM_477685.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.3
3emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4,... 42 1.3
4dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 42 1.3
5gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequ... 42 1.3
6gb|AF360362.1| Pseudomonas putida S12 isolate KL55D8 TrpR (trpR)... 42 1.3
7dbj|AK018219.1| Mus musculus adult male medulla oblongata cDNA, ... 42 1.3
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
10gb|AF448145.2| Myxococcus xanthus che3 chemosensory regulator ge... 42 1.3
11dbj|AP004264.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.3
12dbj|AK099138.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
13dbj|AK067609.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
14emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 1.3
15gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 42 1.3
16emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete ... 42 1.3
17dbj|AB038375.1| Trichosporon mucoides mRNA for 20 kDa protein ha... 42 1.3
18ref|XM_464493.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.2
19ref|XM_476500.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.2
20ref|XM_476497.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.2
21gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 40 5.2
22ref|XM_421027.1| PREDICTED: Gallus gallus mitochondrial ribosoma... 40 5.2
23ref|XM_957223.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.2
24ref|XM_328379.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.2
25gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 40 5.2
26gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 5.2
27gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
28gb|AY330645.1| Ostreococcus tauri dual specificity phosphatase C... 40 5.2
29gb|AC138896.2| Homo sapiens chromosome 16 clone RP11-455M1, comp... 40 5.2
30gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 5.2
31gb|AC145285.2| Homo sapiens chromosome 16 clone RP11-1348G14, co... 40 5.2
32gb|AC138894.2| Homo sapiens chromosome 16 clone RP11-435I10, com... 40 5.2
33gb|AC138824.2| Homo sapiens chromosome 16 clone RP11-1119F12, co... 40 5.2
34gb|AC002544.1|HUAC002544 Homo sapiens Chromosome 16 BAC clone CI... 40 5.2
35emb|BX663531.3| Chicken DNA sequence from clone WAG-18M1, comple... 40 5.2
36gb|CP000284.1| Methylobacillus flagellatus KT, complete genome 40 5.2
37gb|AC084794.3| Homo sapiens chromosome 16 clone CTA-154B9, compl... 40 5.2
38gb|AC026454.5| Homo sapiens chromosome 16 clone CTD-2597E15, com... 40 5.2
39gb|AF516927.1| Oryza sativa embryo-specific protein mRNA, comple... 40 5.2
40gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 5.2
41emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.2
42emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.2
43gb|AC127453.2| Homo sapiens chromosome 16 clone CTA-115H5, compl... 40 5.2
44gb|DQ397874.1| Cenarchaeum symbiosum clone C21F09, complete sequ... 40 5.2
45gb|AF306651.1| Oryza sativa pathogenesis-related protein 1 mRNA,... 40 5.2
46gb|U91326.1|HUU91326 Homo sapiens chromosome 16 BAC clone CIT987... 40 5.2
47gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.2
48gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 5.2
49dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
50dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
51dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
52gb|AC138934.3| Homo sapiens chromosome 16 clone RP11-685O4, comp... 40 5.2
53gb|AC135783.2| Homo sapiens chromosome 16 clone CTD-2555L18, com... 40 5.2
54gb|AF251277.1|AF251277 Oryza sativa subsp. japonica acidic PR-1 ... 40 5.2
55gb|AC116346.2| Homo sapiens chromosome 16 clone RP11-24N18, comp... 40 5.2
56dbj|AP004717.1| Gallus gallus genomic DNA, chromosome 5, clone:1... 40 5.2
57gb|AC011473.4|AC011473 Homo sapiens chromosome 19, BAC BC349142 ... 40 5.2
58gb|DQ345963.1| Oryza sativa (indica cultivar-group) differentiat... 40 5.2
59gb|AC133912.3| Homo sapiens chromosome 16 clone CTC-506N3, compl... 40 5.2
60dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
61dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
62dbj|AP003608.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
63dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
64dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
65dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
66dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
67dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
68dbj|AP006451.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
69dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
70dbj|AK120287.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
71dbj|AK120136.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
72emb|AJ278436.1|OSA278436 Oryza sativa mRNA for PR1a protein 40 5.2
73dbj|AK108352.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
74gb|AF161221.1|AF161221 Homo sapiens kallikrein-like protein 6 (K... 40 5.2
75dbj|AK073083.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
76dbj|AK072650.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
77dbj|AK071103.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
78dbj|AK065374.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.2
79gb|AC097264.4| Pan troglodytes BAC RP43-175I2 (Roswell Park Canc... 40 5.2
80gb|DQ229203.1| Phytophthora ramorum elicitin-like protein RAL1B ... 40 5.2
81gb|AF049348.1|AF049348 Oryza sativa embryo-specific (Ose705) mRN... 40 5.2
82gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 5.2
83gb|AC160647.1| Gallus gallus BAC clone CH261-14N23 from chromoso... 40 5.2
84gb|AC159011.2| Gallus gallus BAC clone CH261-107A24 from chromos... 40 5.2
85emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB1... 40 5.2
86dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 40 5.2
87gb|U10016.1|TRU10016 Trichoderma reesei QM9414 protein kinase C ... 40 5.2 
>gb|AY109005.1| Zea mays PCO121752 mRNA sequence
          Length = 921

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 81  aatcgccgccatggccgccgcc 102
           ||||||||||||||||||||||
Sbjct: 93  aatcgccgccatggccgccgcc 114
to top
>ref|XM_477685.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 492

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 75  gcctccaatcgccgccatggccgcc 99
           |||||||| ||||||||||||||||
Sbjct: 366 gcctccaaccgccgccatggccgcc 342
to top
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05,
              complete sequence
          Length = 164943

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 82     atcgccgccatggccgccgcc 102
              |||||||||||||||||||||
Sbjct: 148994 atcgccgccatggccgccgcc 148974
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 360     ggtggccggagccaccggcag 380
               |||||||||||||||||||||
Sbjct: 1295734 ggtggccggagccaccggcag 1295754
to top
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence
          Length = 505334

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 77     ctccaatcgccgccatggccgccgc 101
              ||||||||||||| |||||||||||
Sbjct: 120434 ctccaatcgccgcaatggccgccgc 120458
to top
>gb|AF360362.1| Pseudomonas putida S12 isolate KL55D8 TrpR (trpR), TrpA (trpA), TrpB
            (trpB), and TrpC (trpC) genes, complete cds
          Length = 5443

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 85   gccgccatggccgccgcccct 105
            |||||||||||||||||||||
Sbjct: 1298 gccgccatggccgccgcccct 1318
to top
>dbj|AK018219.1| Mus musculus adult male medulla oblongata cDNA, RIKEN full-length
           enriched library, clone:6330521J02 product:RIKEN cDNA
           2900009I07 gene, full insert sequence
          Length = 1316

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 84  cgccgccatggccgccgcccctccg 108
           |||||||| ||||||||||||||||
Sbjct: 152 cgccgccagggccgccgcccctccg 128
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 82       atcgccgccatggccgccgcc 102
                |||||||||||||||||||||
Sbjct: 34531510 atcgccgccatggccgccgcc 34531490
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 75       gcctccaatcgccgccatggccgcc 99
                |||||||| ||||||||||||||||
Sbjct: 13277235 gcctccaaccgccgccatggccgcc 13277211



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 83       tcgccgccatggccgccgcc 102
                ||||||||||||||||||||
Sbjct: 28603356 tcgccgccatggccgccgcc 28603375



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 82       atcgccgccatggccgccgc 101
                ||||||||||||||||||||
Sbjct: 19425374 atcgccgccatggccgccgc 19425393



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 83      tcgccgccatggccgccgcc 102
               ||||||||||||||||||||
Sbjct: 1555950 tcgccgccatggccgccgcc 1555931



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 83      tcgccgccatggccgccgcc 102
               ||||||||||||||||||||
Sbjct: 1544356 tcgccgccatggccgccgcc 1544337
to top
>gb|AF448145.2| Myxococcus xanthus che3 chemosensory regulator gene cluster,
           complete sequence
          Length = 17906

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 142 cccgaccgacctcgccatcgt 162
           |||||||||||||||||||||
Sbjct: 770 cccgaccgacctcgccatcgt 790
to top
>dbj|AP004264.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0025D09
          Length = 142593

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 75    gcctccaatcgccgccatggccgcc 99
             |||||||| ||||||||||||||||
Sbjct: 65098 gcctccaaccgccgccatggccgcc 65074
to top
>dbj|AK099138.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054H04, full
           insert sequence
          Length = 2756

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 82  atcgccgccatggccgccgcc 102
           |||||||||||||||||||||
Sbjct: 82  atcgccgccatggccgccgcc 102
to top
>dbj|AK067609.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112I09, full
           insert sequence
          Length = 2819

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 82  atcgccgccatggccgccgcc 102
           |||||||||||||||||||||
Sbjct: 128 atcgccgccatggccgccgcc 148
to top
>emb|AL732351.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0103C06, complete
             sequence
          Length = 104146

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 82    atcgccgccatggccgccgcc 102
             |||||||||||||||||||||
Sbjct: 68015 atcgccgccatggccgccgcc 67995
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 360     ggtggccggagccaccggcag 380
               |||||||||||||||||||||
Sbjct: 1319512 ggtggccggagccaccggcag 1319532
to top
>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29
          Length = 303450

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 82     atcgccgccatggccgccgcc 102
              |||||||||||||||||||||
Sbjct: 144057 atcgccgccatggccgccgcc 144037
to top
>dbj|AB038375.1| Trichosporon mucoides mRNA for 20 kDa protein having G-X-X-X-Q-X-W-
           motif, complete cds
          Length = 787

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  tcgccgccatggccgccgccc 103
           |||||||||||||||||||||
Sbjct: 71  tcgccgccatggccgccgccc 91
to top
>ref|XM_464493.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2610

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  tcgccgccatggccgccgcc 102
           ||||||||||||||||||||
Sbjct: 37  tcgccgccatggccgccgcc 56
to top
>ref|XM_476500.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 498

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  tcgccgccatggccgccgcc 102
           ||||||||||||||||||||
Sbjct: 58  tcgccgccatggccgccgcc 39
to top
>ref|XM_476497.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 507

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  tcgccgccatggccgccgcc 102
           ||||||||||||||||||||
Sbjct: 67  tcgccgccatggccgccgcc 48
to top
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 84      cgccgccatggccgccgccc 103
               ||||||||||||||||||||
Sbjct: 1649205 cgccgccatggccgccgccc 1649186
to top
>ref|XM_421027.1| PREDICTED: Gallus gallus mitochondrial ribosomal protein L23
           (MRPL23), mRNA
          Length = 901

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 84  cgccgccatggccgccgccc 103
           ||||||||||||||||||||
Sbjct: 189 cgccgccatggccgccgccc 170
to top
>ref|XM_957223.1| Neurospora crassa OR74A hypothetical protein (NCU07674.1) partial
           mRNA
          Length = 1920

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 84  cgccgccatggccgccgcccctccgttg 111
           ||||| ||||||||||| ||||||||||
Sbjct: 174 cgccgacatggccgccggccctccgttg 201
to top
>ref|XM_328379.1| Neurospora crassa OR74A hypothetical protein (NCU07674.1) partial
           mRNA
          Length = 1920

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 84  cgccgccatggccgccgcccctccgttg 111
           ||||| ||||||||||| ||||||||||
Sbjct: 174 cgccgacatggccgccggccctccgttg 201
to top
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 84      cgccgccatggccgccgccc 103
               ||||||||||||||||||||
Sbjct: 1361589 cgccgccatggccgccgccc 1361570
to top
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 84      cgccgccatggccgccgccc 103
               ||||||||||||||||||||
Sbjct: 2896126 cgccgccatggccgccgccc 2896107
to top
>gb|AC137588.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0060K21, complete sequence
          Length = 153973

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    tcgccgccatggccgccgcc 102
             ||||||||||||||||||||
Sbjct: 40636 tcgccgccatggccgccgcc 40655
to top
>gb|AY330645.1| Ostreococcus tauri dual specificity phosphatase Cdc25 (cdc25) gene,
           complete cds
          Length = 1188

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 84  cgccgccatggccgccgcccctcc 107
           ||||||||| ||||||||||||||
Sbjct: 363 cgccgccatcgccgccgcccctcc 340
to top
>gb|AC138896.2| Homo sapiens chromosome 16 clone RP11-455M1, complete sequence
          Length = 158271

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     cttcggctcctctccttgcc 77
              ||||||||||||||||||||
Sbjct: 105592 cttcggctcctctccttgcc 105611
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 84      cgccgccatggccgccgccc 103
               ||||||||||||||||||||
Sbjct: 3039751 cgccgccatggccgccgccc 3039770
to top
>gb|AC145285.2| Homo sapiens chromosome 16 clone RP11-1348G14, complete sequence
          Length = 219165

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     cttcggctcctctccttgcc 77
              ||||||||||||||||||||
Sbjct: 127119 cttcggctcctctccttgcc 127138
to top
>gb|AC138894.2| Homo sapiens chromosome 16 clone RP11-435I10, complete sequence
          Length = 182289

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     cttcggctcctctccttgcc 77
              ||||||||||||||||||||
Sbjct: 150016 cttcggctcctctccttgcc 150035
to top
>gb|AC138824.2| Homo sapiens chromosome 16 clone RP11-1119F12, complete sequence
          Length = 134444

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     cttcggctcctctccttgcc 77
              ||||||||||||||||||||
Sbjct: 101699 cttcggctcctctccttgcc 101718
to top
>gb|AC002544.1|HUAC002544 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-761H5, complete
             sequence
          Length = 156641

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    cttcggctcctctccttgcc 77
             ||||||||||||||||||||
Sbjct: 32909 cttcggctcctctccttgcc 32890
to top
>emb|BX663531.3| Chicken DNA sequence from clone WAG-18M1, complete sequence
          Length = 111106

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    cgccgccatggccgccgccc 103
             ||||||||||||||||||||
Sbjct: 53273 cgccgccatggccgccgccc 53254
to top
>gb|CP000284.1| Methylobacillus flagellatus KT, complete genome
          Length = 2971517

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 358     atggtggccggagccaccgg 377
               ||||||||||||||||||||
Sbjct: 2928175 atggtggccggagccaccgg 2928156
to top
>gb|AC084794.3| Homo sapiens chromosome 16 clone CTA-154B9, complete sequence
          Length = 230510

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    cttcggctcctctccttgcc 77
             ||||||||||||||||||||
Sbjct: 14512 cttcggctcctctccttgcc 14531
to top
>gb|AC026454.5| Homo sapiens chromosome 16 clone CTD-2597E15, complete sequence
          Length = 136331

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    cttcggctcctctccttgcc 77
             ||||||||||||||||||||
Sbjct: 94775 cttcggctcctctccttgcc 94756
to top
>gb|AF516927.1| Oryza sativa embryo-specific protein mRNA, complete cds
          Length = 1577

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   tcgccgccatggccgccgcc 102
            ||||||||||||||||||||
Sbjct: 1106 tcgccgccatggccgccgcc 1087
to top
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     tcgccgccatggccgccgcc 102
              ||||||||||||||||||||
Sbjct: 285053 tcgccgccatggccgccgcc 285072
to top
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 84      cgccgccatggccgccgccc 103
               ||||||||||||||||||||
Sbjct: 2679006 cgccgccatggccgccgccc 2678987
to top
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 84      cgccgccatggccgccgccc 103
               ||||||||||||||||||||
Sbjct: 2626161 cgccgccatggccgccgccc 2626142
to top
>gb|AC127453.2| Homo sapiens chromosome 16 clone CTA-115H5, complete sequence
          Length = 63736

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 58   cttcggctcctctccttgcc 77
            ||||||||||||||||||||
Sbjct: 7171 cttcggctcctctccttgcc 7152
to top
>gb|DQ397874.1| Cenarchaeum symbiosum clone C21F09, complete sequence
          Length = 37066

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    ccgccatggccgccgcccct 105
             ||||||||||||||||||||
Sbjct: 26755 ccgccatggccgccgcccct 26736
to top
>gb|AF306651.1| Oryza sativa pathogenesis-related protein 1 mRNA, complete cds
          Length = 864

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  tcgccgccatggccgccgcc 102
           ||||||||||||||||||||
Sbjct: 131 tcgccgccatggccgccgcc 112
to top
>gb|U91326.1|HUU91326 Homo sapiens chromosome 16 BAC clone CIT987SK-A-234F9, complete
             sequence
          Length = 150296

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    cttcggctcctctccttgcc 77
             ||||||||||||||||||||
Sbjct: 80834 cttcggctcctctccttgcc 80815
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    ccgccacaccgttcggcgcc 241
              ||||||||||||||||||||
Sbjct: 865267 ccgccacaccgttcggcgcc 865286
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 84      cgccgccatggccgccgccc 103
               ||||||||||||||||||||
Sbjct: 1126357 cgccgccatggccgccgccc 1126338
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 83       tcgccgccatggccgccgcc 102
                ||||||||||||||||||||
Sbjct: 21158477 tcgccgccatggccgccgcc 21158496
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 82       atcgccgccatggccgccgc 101
                ||||||||||||||||||||
Sbjct: 28801417 atcgccgccatggccgccgc 28801436



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 83       tcgccgccatggccgccgcc 102
                ||||||||||||||||||||
Sbjct: 22960506 tcgccgccatggccgccgcc 22960525



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 84       cgccgccatggccgccgccc 103
                ||||||||||||||||||||
Sbjct: 20142856 cgccgccatggccgccgccc 20142875
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 83      tcgccgccatggccgccgcc 102
               ||||||||||||||||||||
Sbjct: 5536906 tcgccgccatggccgccgcc 5536887
to top
>gb|AC138934.3| Homo sapiens chromosome 16 clone RP11-685O4, complete sequence
          Length = 169127

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    cttcggctcctctccttgcc 77
             ||||||||||||||||||||
Sbjct: 21203 cttcggctcctctccttgcc 21184
to top
>gb|AC135783.2| Homo sapiens chromosome 16 clone CTD-2555L18, complete sequence
          Length = 224150

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     cttcggctcctctccttgcc 77
              ||||||||||||||||||||
Sbjct: 145899 cttcggctcctctccttgcc 145880
to top
>gb|AF251277.1|AF251277 Oryza sativa subsp. japonica acidic PR-1 type pathogenesis-related
           protein PR-1a (PR-1a) mRNA, complete cds
          Length = 813

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  tcgccgccatggccgccgcc 102
           ||||||||||||||||||||
Sbjct: 155 tcgccgccatggccgccgcc 136
to top
>gb|AC116346.2| Homo sapiens chromosome 16 clone RP11-24N18, complete sequence
          Length = 160521

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    cttcggctcctctccttgcc 77
             ||||||||||||||||||||
Sbjct: 63221 cttcggctcctctccttgcc 63240
to top
>dbj|AP004717.1| Gallus gallus genomic DNA, chromosome 5, clone:161D9, complete sequence
          Length = 221022

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    cgccgccatggccgccgccc 103
             ||||||||||||||||||||
Sbjct: 95845 cgccgccatggccgccgccc 95864
to top
>gb|AC011473.4|AC011473 Homo sapiens chromosome 19, BAC BC349142 (CTC-518B2), complete sequence
          Length = 132323

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 183   cctcctcagcccctcgcctagccc 206
             ||||||||||||||| ||||||||
Sbjct: 84604 cctcctcagcccctcccctagccc 84627
to top
>gb|DQ345963.1| Oryza sativa (indica cultivar-group) differentiation embryo protein
            31 (DEP31) mRNA, complete cds
          Length = 1599

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   tcgccgccatggccgccgcc 102
            ||||||||||||||||||||
Sbjct: 1101 tcgccgccatggccgccgcc 1082
to top
>gb|AC133912.3| Homo sapiens chromosome 16 clone CTC-506N3, complete sequence
          Length = 128703

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 58     cttcggctcctctccttgcc 77
              ||||||||||||||||||||
Sbjct: 125244 cttcggctcctctccttgcc 125263
to top
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0409B11
          Length = 168354

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     atcgccgccatggccgccgc 101
              ||||||||||||||||||||
Sbjct: 114912 atcgccgccatggccgccgc 114931
to top
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0502H06
          Length = 165630

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     tcgccgccatggccgccgcc 102
              ||||||||||||||||||||
Sbjct: 135328 tcgccgccatggccgccgcc 135347
to top
>dbj|AP003608.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0007G12
          Length = 111819

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 84   cgccgccatggccgccgccc 103
            ||||||||||||||||||||
Sbjct: 8856 cgccgccatggccgccgccc 8875
to top
>dbj|AP004571.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0652A05
          Length = 150455

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    tcgccgccatggccgccgcc 102
             ||||||||||||||||||||
Sbjct: 26991 tcgccgccatggccgccgcc 27010
to top
>dbj|AP005445.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0028E05
          Length = 157631

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     atcgccgccatggccgccgc 101
              ||||||||||||||||||||
Sbjct: 109192 atcgccgccatggccgccgc 109211
to top
>dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:B1068H08
          Length = 152794

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     cgccgccatggccgccgccc 103
              ||||||||||||||||||||
Sbjct: 131130 cgccgccatggccgccgccc 131149
to top
>dbj|AP004812.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0026H03
          Length = 151827

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tcgccgccatggccgccgcc 102
             ||||||||||||||||||||
Sbjct: 81641 tcgccgccatggccgccgcc 81622
to top
>dbj|AP006172.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0088O14
          Length = 179483

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tcgccgccatggccgccgcc 102
             ||||||||||||||||||||
Sbjct: 24605 tcgccgccatggccgccgcc 24586



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tcgccgccatggccgccgcc 102
             ||||||||||||||||||||
Sbjct: 13011 tcgccgccatggccgccgcc 12992
to top
>dbj|AP006451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1249D05
          Length = 132526

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     tcgccgccatggccgccgcc 102
              ||||||||||||||||||||
Sbjct: 129945 tcgccgccatggccgccgcc 129926
to top
>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1167_G06
          Length = 112386

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    tcgccgccatggccgccgcc 102
             ||||||||||||||||||||
Sbjct: 69314 tcgccgccatggccgccgcc 69333
to top
>dbj|AK120287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013050B17, full
           insert sequence
          Length = 2614

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  tcgccgccatggccgccgcc 102
           ||||||||||||||||||||
Sbjct: 37  tcgccgccatggccgccgcc 56
to top
>dbj|AK120136.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013027G24, full
           insert sequence
          Length = 6233

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  tcgccgccatggccgccgcc 102
           ||||||||||||||||||||
Sbjct: 116 tcgccgccatggccgccgcc 135
to top
>emb|AJ278436.1|OSA278436 Oryza sativa mRNA for PR1a protein
          Length = 830

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  tcgccgccatggccgccgcc 102
           ||||||||||||||||||||
Sbjct: 165 tcgccgccatggccgccgcc 146
to top
>dbj|AK108352.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-C01, full
            insert sequence
          Length = 1620

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   tcgccgccatggccgccgcc 102
            ||||||||||||||||||||
Sbjct: 1132 tcgccgccatggccgccgcc 1113
to top
>gb|AF161221.1|AF161221 Homo sapiens kallikrein-like protein 6 (KLKL6) gene, complete cds
          Length = 8280

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 183 cctcctcagcccctcgcctagccc 206
           ||||||||||||||| ||||||||
Sbjct: 895 cctcctcagcccctcccctagccc 872
to top
>dbj|AK073083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033021I15, full
            insert sequence
          Length = 1621

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   tcgccgccatggccgccgcc 102
            ||||||||||||||||||||
Sbjct: 1133 tcgccgccatggccgccgcc 1114
to top
>dbj|AK072650.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023125B09, full
           insert sequence
          Length = 1463

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  tcgccgccatggccgccgcc 102
           ||||||||||||||||||||
Sbjct: 173 tcgccgccatggccgccgcc 192
to top
>dbj|AK071103.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077F14, full
           insert sequence
          Length = 883

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  tcgccgccatggccgccgcc 102
           ||||||||||||||||||||
Sbjct: 182 tcgccgccatggccgccgcc 163
to top
>dbj|AK065374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013003B24, full
            insert sequence
          Length = 1884

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   cgccgccatggccgccgccc 103
            ||||||||||||||||||||
Sbjct: 1596 cgccgccatggccgccgccc 1577
to top
>gb|AC097264.4| Pan troglodytes BAC RP43-175I2 (Roswell Park Cancer Institute Male
             Chimpanzee BAC Library) complete sequence
          Length = 173720

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    cttcggctcctctccttgcc 77
             ||||||||||||||||||||
Sbjct: 64468 cttcggctcctctccttgcc 64487
to top
>gb|DQ229203.1| Phytophthora ramorum elicitin-like protein RAL1B gene, complete cds
          Length = 747

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 84  cgccgccatggccgccgccc 103
           ||||||||||||||||||||
Sbjct: 30  cgccgccatggccgccgccc 49
to top
>gb|AF049348.1|AF049348 Oryza sativa embryo-specific (Ose705) mRNA, complete cds
          Length = 1709

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   tcgccgccatggccgccgcc 102
            ||||||||||||||||||||
Sbjct: 1113 tcgccgccatggccgccgcc 1094
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 83       tcgccgccatggccgccgcc 102
                ||||||||||||||||||||
Sbjct: 21468718 tcgccgccatggccgccgcc 21468737
to top
>gb|AC160647.1| Gallus gallus BAC clone CH261-14N23 from chromosome unknown, complete
            sequence
          Length = 237526

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 84   cgccgccatggccgccgccc 103
            ||||||||||||||||||||
Sbjct: 6937 cgccgccatggccgccgccc 6956
to top
>gb|AC159011.2| Gallus gallus BAC clone CH261-107A24 from chromosome unknown, complete
              sequence
          Length = 249034

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     cgccgccatggccgccgccc 103
              ||||||||||||||||||||
Sbjct: 177063 cgccgccatggccgccgccc 177082
to top
>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     ctctggagcttcggctcctc 69
              ||||||||||||||||||||
Sbjct: 644453 ctctggagcttcggctcctc 644434
to top
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     tcgccgccatggccgccgcc 102
              ||||||||||||||||||||
Sbjct: 837249 tcgccgccatggccgccgcc 837230
to top
>gb|U10016.1|TRU10016 Trichoderma reesei QM9414 protein kinase C (pkc1) gene, complete cds
          Length = 5131

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 84   cgccgccatggccgccgccc 103
            ||||||||||||||||||||
Sbjct: 3000 cgccgccatggccgccgccc 3019


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,586,150
Number of Sequences: 3902068
Number of extensions: 2586150
Number of successful extensions: 54079
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52947
Number of HSP's gapped (non-prelim): 1132
length of query: 390
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 368
effective length of database: 17,147,199,772
effective search space: 6310169516096
effective search space used: 6310169516096
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top