ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet65d10 |
|---|---|
| Clone Library Name | barley_pub |
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 185 bits (470), Expect = 2e-47 Identities = 87/96 (90%), Positives = 91/96 (94%) Frame = +1 Query: 112 QTVKNVPSSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFP 291 + VKN+PSSAL G+ARV MRK AAKAKQVSS SPWYG+DRVLYLGPLSGEPPSYLTGEFP Sbjct: 16 KAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEFP 75 Query: 292 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL Sbjct: 76 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 111
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 172 bits (437), Expect = 1e-43 Identities = 85/93 (91%), Positives = 87/93 (93%), Gaps = 1/93 (1%) Frame = +1 Query: 124 NVPSSALFGEARVTMRKIAAKAKQVS-SGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDY 300 NVPSS+ FGEARVTMRK AAKAK + SGSPWYG DRVLYLGPLSGEPPSYLTGEFPGDY Sbjct: 19 NVPSSS-FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDY 77 Query: 301 GWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 GWDTAGLSADPETFAKNRELEVIHCRWAMLGAL Sbjct: 78 GWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 110
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 171 bits (433), Expect = 4e-43 Identities = 86/93 (92%), Positives = 86/93 (92%), Gaps = 1/93 (1%) Frame = +1 Query: 124 NVPSSALFGEARVTMRKIAAKAKQV-SSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDY 300 NVPSS LFGEARVTMRK AAKAK SSGSPWYG DRVLYLGPLSGEPPSYLTGEFPGDY Sbjct: 19 NVPSS-LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGEFPGDY 77 Query: 301 GWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 GWDTAGLSADPETFAKNRELEVIH RWAMLGAL Sbjct: 78 GWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 110
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 170 bits (431), Expect = 7e-43 Identities = 83/90 (92%), Positives = 84/90 (93%), Gaps = 1/90 (1%) Frame = +1 Query: 133 SSALFGEARVTMRKIAAKAKQV-SSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 309 SSALFGEAR+TMRK AAK K SSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD Sbjct: 21 SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 80 Query: 310 TAGLSADPETFAKNRELEVIHCRWAMLGAL 399 TAGLSADPETFAKNRELEVIH RWAMLGAL Sbjct: 81 TAGLSADPETFAKNRELEVIHSRWAMLGAL 110
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 166 bits (421), Expect = 9e-42 Identities = 77/89 (86%), Positives = 82/89 (92%) Frame = +1 Query: 133 SSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 312 ++ +FGE R+TMRK AAK K +SGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT Sbjct: 18 AAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 77 Query: 313 AGLSADPETFAKNRELEVIHCRWAMLGAL 399 AGLSADPETFAKNRELEVIH RWAMLGAL Sbjct: 78 AGLSADPETFAKNRELEVIHSRWAMLGAL 106
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 163 bits (412), Expect = 1e-40 Identities = 79/97 (81%), Positives = 84/97 (86%), Gaps = 1/97 (1%) Frame = +1 Query: 112 QTVKNVPSSA-LFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 288 + VK PSS+ + G +VTMRK A+KAK VSSGSPWYG DRV YLGP SGE PSYLTGEF Sbjct: 16 KAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEF 75 Query: 289 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL Sbjct: 76 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 112
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 162 bits (411), Expect = 1e-40 Identities = 79/97 (81%), Positives = 84/97 (86%), Gaps = 1/97 (1%) Frame = +1 Query: 112 QTVKNVPSSA-LFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 288 + VK PSS+ + G +VTMRK A+KAK VSSGSPWYG DRV YLGP SGE PSYLTGEF Sbjct: 15 KAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEF 74 Query: 289 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL Sbjct: 75 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 111
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 162 bits (410), Expect = 2e-40 Identities = 79/97 (81%), Positives = 82/97 (84%), Gaps = 1/97 (1%) Frame = +1 Query: 112 QTVKNVPSSA-LFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 288 + VK PSS+ + G RVTMRK A KAK SSGSPWYG DRV YLGP SGE PSYLTGEF Sbjct: 16 KAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEF 75 Query: 289 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL Sbjct: 76 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 112
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 161 bits (408), Expect = 3e-40 Identities = 79/97 (81%), Positives = 83/97 (85%), Gaps = 1/97 (1%) Frame = +1 Query: 112 QTVKNVPSSA-LFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 288 + VK PSS+ + G +VTMRK A KAK VSSGSPWYG DRV YLGP SGE PSYLTGEF Sbjct: 15 KAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEF 74 Query: 289 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL Sbjct: 75 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 111 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = +1 Query: 250 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 387 ++GEP + +D GL+ DPE FA+ + E+ + R AM Sbjct: 177 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAM 222
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 161 bits (408), Expect = 3e-40 Identities = 77/93 (82%), Positives = 80/93 (86%), Gaps = 1/93 (1%) Frame = +1 Query: 124 NVPSSA-LFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDY 300 NVPSS+ + G + TMRK KAK VSSGSPWYG DRV YLGP SGE PSYLTGEFPGDY Sbjct: 19 NVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDY 78 Query: 301 GWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 GWDTAGLSADPETFAKNRELEVIHCRWAMLGAL Sbjct: 79 GWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 111
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 161 bits (407), Expect = 4e-40 Identities = 78/97 (80%), Positives = 82/97 (84%), Gaps = 1/97 (1%) Frame = +1 Query: 112 QTVKNVPSSA-LFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 288 + VK PSS+ + G + TMRK A KAK VSSGSPWYG DRV YLGP SGE PSYLTGEF Sbjct: 16 KVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 75 Query: 289 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL Sbjct: 76 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 112
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 160 bits (404), Expect = 9e-40 Identities = 77/97 (79%), Positives = 82/97 (84%), Gaps = 1/97 (1%) Frame = +1 Query: 112 QTVKNVPSSA-LFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 288 + VK PSS+ + G +VTMRK KAK +SSGSPWYG DRV YLGP SGE PSYLTGEF Sbjct: 16 KAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEF 75 Query: 289 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL Sbjct: 76 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 112
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 159 bits (401), Expect = 2e-39 Identities = 77/100 (77%), Positives = 81/100 (81%), Gaps = 1/100 (1%) Frame = +1 Query: 103 LCRQTVKNVPS-SALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLT 279 L + VK P+ S + GE R+TMRK A K K V S SPWYG DRV YLGP SGE PSYLT Sbjct: 13 LAGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLT 72 Query: 280 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL Sbjct: 73 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 112
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 159 bits (401), Expect = 2e-39 Identities = 77/97 (79%), Positives = 83/97 (85%), Gaps = 1/97 (1%) Frame = +1 Query: 112 QTVKNVPSSA-LFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 288 + VK PSS+ + G +VTMRK A+KAK VSS SPWYG +RV YLGP SGE PSYLTGEF Sbjct: 16 KAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGEF 75 Query: 289 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL Sbjct: 76 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 112 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = +1 Query: 250 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 387 ++GEP + +D GL+ DPE FA+ + E+ + R AM Sbjct: 178 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAM 223
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 157 bits (397), Expect = 6e-39 Identities = 71/82 (86%), Positives = 74/82 (90%) Frame = +1 Query: 142 LFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGL 321 +FGE R+TMRK AAK K SGSPWYGADRVLYLGPLSG PPSYLTGEFPGDYGWDT GL Sbjct: 24 VFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGL 83 Query: 322 SADPETFAKNRELEVIHCRWAM 387 SADPETFAKNRELEVIHCRWA+ Sbjct: 84 SADPETFAKNRELEVIHCRWAI 105
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 157 bits (396), Expect = 7e-39 Identities = 72/85 (84%), Positives = 74/85 (87%) Frame = +1 Query: 145 FGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 324 FGE R+TMRK K K +SGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLS Sbjct: 23 FGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 82 Query: 325 ADPETFAKNRELEVIHCRWAMLGAL 399 ADPETFAKNRELEVIH RWAMLGAL Sbjct: 83 ADPETFAKNRELEVIHSRWAMLGAL 107
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 157 bits (396), Expect = 7e-39 Identities = 76/95 (80%), Positives = 79/95 (83%), Gaps = 1/95 (1%) Frame = +1 Query: 118 VKNVPSSA-LFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPG 294 VK PSS+ + G + MRK KAK VSSGSPWYG DRV YLGP SGE PSYLTGEFPG Sbjct: 18 VKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPG 77 Query: 295 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL Sbjct: 78 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 112
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 156 bits (395), Expect = 1e-38 Identities = 76/97 (78%), Positives = 80/97 (82%), Gaps = 1/97 (1%) Frame = +1 Query: 112 QTVKNVPSSA-LFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 288 + VK PSS+ + G + TMRK KAK VSSGSPWYG DRV YLGP SGE PSYLTGEF Sbjct: 16 KAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 75 Query: 289 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 PGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGAL Sbjct: 76 PGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGAL 112
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 154 bits (390), Expect = 4e-38 Identities = 74/93 (79%), Positives = 78/93 (83%), Gaps = 1/93 (1%) Frame = +1 Query: 124 NVPSSA-LFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDY 300 NVPSS+ + +VTMRK KAK VSSGSPWYG DRV YLGP SGE PSYLTGEFPGDY Sbjct: 19 NVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDY 78 Query: 301 GWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 GWDTAGLSADP TFAKNR+LEVIHCRW MLGAL Sbjct: 79 GWDTAGLSADPATFAKNRKLEVIHCRWTMLGAL 111
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 154 bits (389), Expect = 5e-38 Identities = 72/89 (80%), Positives = 74/89 (83%) Frame = +1 Query: 133 SSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 312 SS + G +VTMRK KAK SS SPWYG DRV YLGP SGE PSYLTGEFP DYGWDT Sbjct: 24 SSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGEFPSDYGWDT 83 Query: 313 AGLSADPETFAKNRELEVIHCRWAMLGAL 399 AGLSADPETFAKNRELEVIHCRWAMLGAL Sbjct: 84 AGLSADPETFAKNRELEVIHCRWAMLGAL 112
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 153 bits (386), Expect = 1e-37 Identities = 77/100 (77%), Positives = 83/100 (83%), Gaps = 1/100 (1%) Frame = +1 Query: 103 LCRQTVKNVPSSA-LFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLT 279 L Q VK P++ + G A+ TMRK A+K+ VSSGSPWYG DRV YLGP SGEPPSYLT Sbjct: 3 LAGQAVKLSPNAPEIQGNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLT 60 Query: 280 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGAL Sbjct: 61 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 100
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 153 bits (386), Expect = 1e-37 Identities = 75/99 (75%), Positives = 78/99 (78%) Frame = +1 Query: 103 LCRQTVKNVPSSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTG 282 L + +K PSS G AR TMRK A K SSGSPWYG DRV YLGP SGE PSYLTG Sbjct: 16 LAGKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTG 75 Query: 283 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 EFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGAL Sbjct: 76 EFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGAL 114
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 153 bits (386), Expect = 1e-37 Identities = 74/90 (82%), Positives = 77/90 (85%) Frame = +1 Query: 130 PSSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 309 PS+ G RV+MRK A+K VSSGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWD Sbjct: 3 PSTPQLGVGRVSMRKTASKT--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWD 60 Query: 310 TAGLSADPETFAKNRELEVIHCRWAMLGAL 399 TAGLSADPETFAKNRELEVIH RWAMLGAL Sbjct: 61 TAGLSADPETFAKNRELEVIHSRWAMLGAL 90
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 152 bits (384), Expect = 2e-37 Identities = 73/89 (82%), Positives = 75/89 (84%), Gaps = 1/89 (1%) Frame = +1 Query: 136 SALFGEARVTMRKIAAKAKQVS-SGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 312 + + GEARVTMRK K S S SPWYG DRVLYLGP SGEPPSYLTGEFPGDYGWDT Sbjct: 31 AGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90 Query: 313 AGLSADPETFAKNRELEVIHCRWAMLGAL 399 AGLSADPE FAKNRELEVIHCRWAMLGAL Sbjct: 91 AGLSADPENFAKNRELEVIHCRWAMLGAL 119
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 152 bits (383), Expect = 2e-37 Identities = 73/90 (81%), Positives = 74/90 (82%) Frame = +1 Query: 130 PSSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 309 PSS G AR TMRK A K SSGSPWYG DRV YLGP SGE PSYLTGEFPGDYGWD Sbjct: 24 PSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWD 83 Query: 310 TAGLSADPETFAKNRELEVIHCRWAMLGAL 399 TAGLSADPETF+KNRELEVIH RWAMLGAL Sbjct: 84 TAGLSADPETFSKNRELEVIHSRWAMLGAL 113
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 151 bits (382), Expect = 3e-37 Identities = 76/97 (78%), Positives = 78/97 (80%), Gaps = 1/97 (1%) Frame = +1 Query: 112 QTVKNVPS-SALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 288 Q VK PS S + G R+TMRK A AK S SPWYG DRV YLGP SGE PSYLTGEF Sbjct: 16 QAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEF 73 Query: 289 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL Sbjct: 74 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 110
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 150 bits (379), Expect = 7e-37 Identities = 71/89 (79%), Positives = 75/89 (84%) Frame = +1 Query: 133 SSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 312 +S +FG RVTMRK SGSPWYG+DRV YLGP SGEPPSYLTGEFPGDYGWDT Sbjct: 24 ASEVFGTGRVTMRKTVKPTGP--SGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 81 Query: 313 AGLSADPETFAKNRELEVIHCRWAMLGAL 399 AGLSADPETFA+NRELEVIHCRWAMLGAL Sbjct: 82 AGLSADPETFARNRELEVIHCRWAMLGAL 110
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 150 bits (379), Expect = 7e-37 Identities = 77/99 (77%), Positives = 80/99 (80%) Frame = +1 Query: 103 LCRQTVKNVPSSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTG 282 L + VK PS+ G RV+MRK K QVSSGSPWYG DRV YLGP SGEPPSYLTG Sbjct: 14 LAGKAVKLGPSAPEVG--RVSMRKTVTK--QVSSGSPWYGPDRVKYLGPFSGEPPSYLTG 69 Query: 283 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 EFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGAL Sbjct: 70 EFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 108
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 150 bits (378), Expect = 9e-37 Identities = 75/97 (77%), Positives = 79/97 (81%), Gaps = 1/97 (1%) Frame = +1 Query: 112 QTVKNVPSSA-LFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 288 Q VK PS+ + G RV+MRK AK V+S SPWYG DRV YLGP SGE PSYLTGEF Sbjct: 16 QAVKLSPSAPEITGNGRVSMRKTVAKP--VASSSPWYGPDRVKYLGPFSGESPSYLTGEF 73 Query: 289 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL Sbjct: 74 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 110
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 148 bits (374), Expect = 3e-36 Identities = 71/85 (83%), Positives = 73/85 (85%), Gaps = 1/85 (1%) Frame = +1 Query: 148 GEARVTMRKIAAKAKQVSS-GSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 324 GEAR+TMRK K +S SPWYG DRVLYLGP SGEPPSYLTGEFPGDYGWDTAGLS Sbjct: 39 GEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98 Query: 325 ADPETFAKNRELEVIHCRWAMLGAL 399 ADPETFAKNRELEVIH RWAMLGAL Sbjct: 99 ADPETFAKNRELEVIHSRWAMLGAL 123
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 147 bits (372), Expect = 5e-36 Identities = 75/97 (77%), Positives = 81/97 (83%), Gaps = 1/97 (1%) Frame = +1 Query: 112 QTVKNVPSSA-LFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 288 + VKN+ SS+ + G+ARV+MRK AA K GSPWYG DRV YLGP SGE PSYLTGEF Sbjct: 16 KAVKNLSSSSEVQGDARVSMRKTAATKKV---GSPWYGPDRVKYLGPFSGESPSYLTGEF 72 Query: 289 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGAL Sbjct: 73 PGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGAL 109
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 147 bits (372), Expect = 5e-36 Identities = 71/89 (79%), Positives = 75/89 (84%) Frame = +1 Query: 133 SSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 312 +S + G RVTMRK AK K SGSPWYG+DRV YLGP SGE PSYLTGEFPGDYGWDT Sbjct: 24 ASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDT 82 Query: 313 AGLSADPETFAKNRELEVIHCRWAMLGAL 399 AGLSADPETFA+NRELEVIH RWAMLGAL Sbjct: 83 AGLSADPETFARNRELEVIHSRWAMLGAL 111
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 147 bits (372), Expect = 5e-36 Identities = 71/89 (79%), Positives = 75/89 (84%) Frame = +1 Query: 133 SSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 312 +S + G RVTMRK AK K SGSPWYG+DRV YLGP SGE PSYLTGEFPGDYGWDT Sbjct: 24 ASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGESPSYLTGEFPGDYGWDT 82 Query: 313 AGLSADPETFAKNRELEVIHCRWAMLGAL 399 AGLSADPETFA+NRELEVIH RWAMLGAL Sbjct: 83 AGLSADPETFARNRELEVIHSRWAMLGAL 111
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 147 bits (370), Expect = 8e-36 Identities = 70/85 (82%), Positives = 73/85 (85%), Gaps = 1/85 (1%) Frame = +1 Query: 148 GEARVTMRKIAA-KAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 324 GEAR+TMRK K+ S SPWYG DRV+YLGP SGEPPSYLTGEFPGDYGWDTAGLS Sbjct: 39 GEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98 Query: 325 ADPETFAKNRELEVIHCRWAMLGAL 399 ADPETFAKNRELEVIH RWAMLGAL Sbjct: 99 ADPETFAKNRELEVIHSRWAMLGAL 123
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 146 bits (368), Expect = 1e-35 Identities = 75/100 (75%), Positives = 78/100 (78%), Gaps = 1/100 (1%) Frame = +1 Query: 103 LCRQTVKNVPSSA-LFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLT 279 L + VK PSS+ LFG RV+MRK K S SPWYG DRV YLGP SGE PSYLT Sbjct: 13 LAGKAVKVAPSSSELFGNGRVSMRKTV---KAPVSDSPWYGPDRVKYLGPFSGEAPSYLT 69 Query: 280 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 GEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGAL Sbjct: 70 GEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 109
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 137 bits (344), Expect = 8e-33 Identities = 67/84 (79%), Positives = 70/84 (83%) Frame = +1 Query: 148 GEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 327 GEARV M +KA SGS WYG+DR LYLGP SG PPSYL+GEFPGDYGWDTAGLSA Sbjct: 30 GEARVQMMAPKSKAP---SGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDYGWDTAGLSA 86 Query: 328 DPETFAKNRELEVIHCRWAMLGAL 399 DPETFAKNRELEVIH RWAMLGAL Sbjct: 87 DPETFAKNRELEVIHSRWAMLGAL 110
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 135 bits (339), Expect = 3e-32 Identities = 64/85 (75%), Positives = 68/85 (80%) Frame = +1 Query: 145 FGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 324 FGE R+TMR+ A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGEGRITMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 325 ADPETFAKNRELEVIHCRWAMLGAL 399 ADPETFA+NRELEVIHCRWAMLGAL Sbjct: 86 ADPETFARNRELEVIHCRWAMLGAL 110
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 131 bits (329), Expect = 4e-31 Identities = 63/85 (74%), Positives = 66/85 (77%) Frame = +1 Query: 145 FGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 324 FG R TMR+ A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGGGRATMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 325 ADPETFAKNRELEVIHCRWAMLGAL 399 ADPETFA+NRELEVIHCRWAMLGAL Sbjct: 86 ADPETFARNRELEVIHCRWAMLGAL 110
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 129 bits (325), Expect = 1e-30 Identities = 63/85 (74%), Positives = 66/85 (77%) Frame = +1 Query: 145 FGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 324 F RVTMR+ A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 2 FEGGRVTMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 57 Query: 325 ADPETFAKNRELEVIHCRWAMLGAL 399 ADPETFA+NRELEVIHCRWAMLGAL Sbjct: 58 ADPETFARNRELEVIHCRWAMLGAL 82
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 129 bits (325), Expect = 1e-30 Identities = 60/70 (85%), Positives = 61/70 (87%) Frame = +1 Query: 190 KQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 369 K SS SPW+G D V YLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI Sbjct: 4 KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 63 Query: 370 HCRWAMLGAL 399 H RWAMLGAL Sbjct: 64 HSRWAMLGAL 73
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 129 bits (323), Expect = 2e-30 Identities = 65/100 (65%), Positives = 75/100 (75%) Frame = +1 Query: 100 DLCRQTVKNVPSSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLT 279 +L R+ + NV EARVTMR+ +K+ S + WYGADR +LGP SGE PSYL Sbjct: 23 ELSRKVLGNV-------EARVTMRRTVSKS--AGSDTIWYGADRPKFLGPFSGETPSYLN 73 Query: 280 GEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 GEF GDYGWDTAGLS+DPETFA+NRELEVIH RWAMLGAL Sbjct: 74 GEFAGDYGWDTAGLSSDPETFARNRELEVIHARWAMLGAL 113
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 129 bits (323), Expect = 2e-30 Identities = 62/85 (72%), Positives = 65/85 (76%) Frame = +1 Query: 145 FGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 324 F R TMR+ A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FNGGRATMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 325 ADPETFAKNRELEVIHCRWAMLGAL 399 ADPETFA+NRELEVIHCRWAMLGAL Sbjct: 86 ADPETFARNRELEVIHCRWAMLGAL 110
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 128 bits (321), Expect = 4e-30 Identities = 62/85 (72%), Positives = 67/85 (78%) Frame = +1 Query: 145 FGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 324 FG+AR TMR+ A + S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGQARFTMRRTVKSAPE----SIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLS 85 Query: 325 ADPETFAKNRELEVIHCRWAMLGAL 399 ADPETFA+NRELEVIH RWAMLGAL Sbjct: 86 ADPETFARNRELEVIHSRWAMLGAL 110
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 127 bits (319), Expect = 6e-30 Identities = 62/84 (73%), Positives = 65/84 (77%) Frame = +1 Query: 148 GEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 327 G RV+MR+ A S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSA Sbjct: 31 GGGRVSMRRTVKSAPT----SIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSA 86 Query: 328 DPETFAKNRELEVIHCRWAMLGAL 399 DPETFAKNRELEVIHCRWAMLGAL Sbjct: 87 DPETFAKNRELEVIHCRWAMLGAL 110
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 127 bits (318), Expect = 8e-30 Identities = 61/81 (75%), Positives = 65/81 (80%) Frame = +1 Query: 157 RVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 336 RV+MR+ A + S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPE Sbjct: 33 RVSMRRTIKSAPE----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 88 Query: 337 TFAKNRELEVIHCRWAMLGAL 399 TFAKNRELEVIHCRWAMLGAL Sbjct: 89 TFAKNRELEVIHCRWAMLGAL 109
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 125 bits (315), Expect = 2e-29 Identities = 60/83 (72%), Positives = 65/83 (78%) Frame = +1 Query: 151 EARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 330 +AR+TMR+ A + S WYG DR YLGP S PSYLTGEFPGDYGWDTA +SAD Sbjct: 33 QARITMRRTVRSAPE----SIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSAD 88 Query: 331 PETFAKNRELEVIHCRWAMLGAL 399 PETFAKNRELEVIHCRWAMLGAL Sbjct: 89 PETFAKNRELEVIHCRWAMLGAL 111
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 124 bits (312), Expect = 4e-29 Identities = 60/81 (74%), Positives = 64/81 (79%) Frame = +1 Query: 157 RVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 336 R+TMR+ A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPE Sbjct: 32 RITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87 Query: 337 TFAKNRELEVIHCRWAMLGAL 399 TFA+NRELEVIH RWAMLGAL Sbjct: 88 TFARNRELEVIHSRWAMLGAL 108
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 122 bits (306), Expect = 2e-28 Identities = 63/104 (60%), Positives = 69/104 (66%), Gaps = 13/104 (12%) Frame = +1 Query: 127 VPSSALFGEARVTMRKIAAKAKQVSSG-------------SPWYGADRVLYLGPLSGEPP 267 + SSA G+ + R + VS G S WYGADR +LGP S + P Sbjct: 6 IQSSAFAGQTALKQRDELVRKVGVSDGRFSMRRTVKAVPQSIWYGADRPKFLGPFSEQTP 65 Query: 268 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGAL Sbjct: 66 SYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGAL 109
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 122 bits (306), Expect = 2e-28 Identities = 67/99 (67%), Positives = 70/99 (70%) Frame = +1 Query: 103 LCRQTVKNVPSSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTG 282 L Q +K PS+ G RV+MRK A K VSSGSPWYG DRV YLGP SGE PSYLTG Sbjct: 13 LAGQAMKLAPSTPELGVGRVSMRKTAPKT--VSSGSPWYGPDRVKYLGPFSGEAPSYLTG 70 Query: 283 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 EF GLSADPETFAKNRELEVIH RWAMLGAL Sbjct: 71 EF--------HGLSADPETFAKNRELEVIHSRWAMLGAL 101
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 116 bits (291), Expect = 1e-26 Identities = 54/71 (76%), Positives = 56/71 (78%) Frame = +1 Query: 187 AKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEV 366 A+ S WYG DRV YLGP S + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEV Sbjct: 38 ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEV 97 Query: 367 IHCRWAMLGAL 399 IH RWAMLGAL Sbjct: 98 IHGRWAMLGAL 108 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +1 Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 387 +PG +D GL+ DP TFA+ + E+ + R AM Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAM 221
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 115 bits (288), Expect = 3e-26 Identities = 56/80 (70%), Positives = 63/80 (78%), Gaps = 2/80 (2%) Frame = +1 Query: 166 MRKIAAKAK-QVSSGSP-WYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPET 339 +R IAA +++ G+ WYG DRV YLGP S + PSYL GEFPGDYGWDTAGLSADPE Sbjct: 32 LRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEA 91 Query: 340 FAKNRELEVIHCRWAMLGAL 399 FA+NR LEVIH RWAMLGAL Sbjct: 92 FARNRALEVIHGRWAMLGAL 111 Score = 28.5 bits (62), Expect = 4.0 Identities = 14/34 (41%), Positives = 21/34 (61%) Frame = +1 Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 387 +PG +D GL+ DP TFA+ + E+ + R AM Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAM 224
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 115 bits (288), Expect = 3e-26 Identities = 57/83 (68%), Positives = 63/83 (75%) Frame = +1 Query: 151 EARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 330 +A T + AA AK S+G WYG DR +LGP S P+YLTGEFPGDYGWDTAGLSAD Sbjct: 20 KAAGTKQTKAAPAK--SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSAD 77 Query: 331 PETFAKNRELEVIHCRWAMLGAL 399 PETF K RELEVIH RWA+LGAL Sbjct: 78 PETFKKYRELEVIHARWALLGAL 100 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/34 (41%), Positives = 23/34 (67%) Frame = +1 Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAM 387 +PG+ +D GL+ DP+TFA+ + E+ + R AM Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAM 212
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 111 bits (278), Expect = 4e-25 Identities = 65/106 (61%), Positives = 70/106 (66%) Frame = +1 Query: 82 HVHLLLDLCRQTVKNVPSSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGE 261 H L+ + + + N SS L A TM K AAK+K SS RV YLGP SGE Sbjct: 13 HPLLIYKIAKPSKLNPISSTLIVTAGFTMLKHAAKSKVSSSTCD----RRVKYLGPFSGE 68 Query: 262 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM AL Sbjct: 69 WPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAAL 114
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 107 bits (268), Expect = 5e-24 Identities = 57/89 (64%), Positives = 65/89 (73%), Gaps = 2/89 (2%) Frame = +1 Query: 139 ALFGEARVTMRKIAAKAKQV-SSGSPWYGADRVLYLGPLS-GEPPSYLTGEFPGDYGWDT 312 AL + T +K AAKA SSG +YG +R +LGP S P+YLTGEFPGDYGWDT Sbjct: 10 ALQVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDT 69 Query: 313 AGLSADPETFAKNRELEVIHCRWAMLGAL 399 AGLSADPETF + RELE+IH RWAMLGAL Sbjct: 70 AGLSADPETFKRYRELELIHARWAMLGAL 98
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 106 bits (264), Expect = 2e-23 Identities = 48/51 (94%), Positives = 48/51 (94%) Frame = +1 Query: 247 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 P SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGAL Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGAL 51
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 101 bits (251), Expect = 5e-22 Identities = 45/63 (71%), Positives = 53/63 (84%), Gaps = 1/63 (1%) Frame = +1 Query: 214 WYGADRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 390 +YG DR +LGP S + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92 Query: 391 GAL 399 GAL Sbjct: 93 GAL 95 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/38 (39%), Positives = 23/38 (60%) Frame = +1 Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 +PG +D GL+ DP+TFA+ + E+ + R AM L Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCL 213
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 81.3 bits (199), Expect = 5e-16 Identities = 43/79 (54%), Positives = 51/79 (64%) Frame = +1 Query: 163 TMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETF 342 T + A +K SS + +YG D L + P TGEFPGDYGWDTAGLSADPETF Sbjct: 40 TKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETF 98 Query: 343 AKNRELEVIHCRWAMLGAL 399 + RELE+IH R +LGAL Sbjct: 99 KRYRELELIHARCGLLGAL 117 Score = 29.6 bits (65), Expect = 1.8 Identities = 15/38 (39%), Positives = 24/38 (63%) Frame = +1 Query: 286 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 +PG+ +D GL+ DP+TFA+ + E+ + R AM L Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACL 234
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 74.3 bits (181), Expect = 6e-14 Identities = 41/89 (46%), Positives = 51/89 (57%), Gaps = 3/89 (3%) Frame = +1 Query: 139 ALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWD 309 ALF + + K A ++ + WYG DR ++L G L E P YL GE GDYG+D Sbjct: 37 ALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYD 96 Query: 310 TAGLSADPETFAKNRELEVIHCRWAMLGA 396 GL PE FAK + E+IH RWAMLGA Sbjct: 97 PFGLGKKPENFAKYQAFELIHARWAMLGA 125
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 65.9 bits (159), Expect = 2e-11 Identities = 32/94 (34%), Positives = 51/94 (54%) Frame = +1 Query: 115 TVKNVPSSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPG 294 ++ ++ G R+ + K + S+ + AD L PP +L G PG Sbjct: 25 SIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFPGSTPPPWLDGSLPG 84 Query: 295 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 396 D+G+D GL++DPE+ N++ E++HCRWAMLGA Sbjct: 85 DFGFDPLGLASDPESLRWNQQAELVHCRWAMLGA 118
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 61.2 bits (147), Expect = 6e-10 Identities = 32/94 (34%), Positives = 46/94 (48%) Frame = +1 Query: 115 TVKNVPSSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPG 294 ++ ++ G R+ + K A S AD L PP +L G PG Sbjct: 25 SIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPG 84 Query: 295 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGA 396 D+G+D GL +DPE+ N + E++H RWAMLGA Sbjct: 85 DFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGA 118
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 57.0 bits (136), Expect = 1e-08 Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 1/48 (2%) Frame = +1 Query: 250 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 390 + G+P PSYL G PGD+G+D+ GL P + +E E+IHCRWAML Sbjct: 50 MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAML 97
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 56.2 bits (134), Expect = 2e-08 Identities = 26/43 (60%), Positives = 31/43 (72%) Frame = +1 Query: 262 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 390 PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSML 422 Score = 53.9 bits (128), Expect = 9e-08 Identities = 24/46 (52%), Positives = 32/46 (69%) Frame = +1 Query: 253 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 390 + EPP+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAML 238 Score = 52.8 bits (125), Expect = 2e-07 Identities = 25/45 (55%), Positives = 32/45 (71%) Frame = +1 Query: 265 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 PS+L GE+ GD G+D AGL+ADP+TF + R EV H R AML + Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVV 56
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 53.1 bits (126), Expect = 2e-07 Identities = 35/99 (35%), Positives = 45/99 (45%), Gaps = 6/99 (6%) Frame = +1 Query: 121 KNVPSSALFGEARV------TMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTG 282 K S LF ++V T RK+ A + W A + G + P +L G Sbjct: 23 KKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVK----GGGNFLDPEWLDG 78 Query: 283 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 PGD+G+D GL DP RE E+IH RWAML L Sbjct: 79 SLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVL 117
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 50.8 bits (120), Expect = 8e-07 Identities = 23/45 (51%), Positives = 26/45 (57%) Frame = +1 Query: 265 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 P +L G PGDYG+D GL DP RE E+IH RWAM L Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVL 112
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 50.8 bits (120), Expect = 8e-07 Identities = 21/44 (47%), Positives = 31/44 (70%) Frame = +1 Query: 259 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 390 +PP++LTGE+P D G+D ++ADP +A+ R EV H R +ML Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSML 210
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 49.3 bits (116), Expect = 2e-06 Identities = 22/45 (48%), Positives = 26/45 (57%) Frame = +1 Query: 265 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 P +L G PGD+G+D GL DP RE E+IH RWAM L Sbjct: 68 PEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVL 112
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 47.0 bits (110), Expect = 1e-05 Identities = 21/43 (48%), Positives = 27/43 (62%) Frame = +1 Query: 265 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLG 393 P YLTG GD G+D GL+ DPE + E+++ RWAMLG Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLG 106
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 43.5 bits (101), Expect = 1e-04 Identities = 22/36 (61%), Positives = 26/36 (72%), Gaps = 1/36 (2%) Frame = +1 Query: 112 QTVKNVPSSA-LFGEARVTMRKIAAKAKQVSSGSPW 216 +TVK PSS+ + G R+TMRK AAK K SSGSPW Sbjct: 16 KTVKLAPSSSEITGNGRITMRKTAAKPKPASSGSPW 51
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 43.1 bits (100), Expect = 2e-04 Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 6/82 (7%) Frame = +1 Query: 169 RKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE---T 339 RK + + S+ GA+R L+ S + SYL G PGD+G+D GLS DPE Sbjct: 33 RKASFVVRAASTPPVKQGANRQLWFA--SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGG 89 Query: 340 FAKNREL---EVIHCRWAMLGA 396 F + + L EVI+ R+AMLGA Sbjct: 90 FIEPKWLAYGEVINGRFAMLGA 111
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 40.8 bits (94), Expect = 8e-04 Identities = 21/36 (58%), Positives = 25/36 (69%), Gaps = 1/36 (2%) Frame = +1 Query: 112 QTVKNVPSSA-LFGEARVTMRKIAAKAKQVSSGSPW 216 + VK PSS+ + G R+TMRK AAK K SSGSPW Sbjct: 16 KAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPW 51
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 35.4 bits (80), Expect = 0.033 Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 2/54 (3%) Frame = +1 Query: 241 LGPLSGEPPSYLT-GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGA 396 + P +G+ S L G PGD G+D GL+ +DP+ F +E E+ H R AM+ A Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAA 185
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 33.1 bits (74), Expect = 0.16 Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Frame = +1 Query: 232 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 VL +G + + + L E +PG +D GL+ADPE A+ + E+ H R AM+ L Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFL 254 Score = 32.0 bits (71), Expect = 0.36 Identities = 35/128 (27%), Positives = 45/128 (35%), Gaps = 43/128 (33%) Frame = +1 Query: 145 FGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 324 FG+ + +K A K V++ P + Y G +S P +L G GDYG+D GL Sbjct: 36 FGKKKAAPKKSAKKT--VTTDRPLW------YPGAIS---PDWLDGSLVGDYGFDPFGLG 84 Query: 325 ADPE-----------TFAKN--------------------------------RELEVIHC 375 E AKN RE E+IH Sbjct: 85 KPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHG 144 Query: 376 RWAMLGAL 399 RWAML L Sbjct: 145 RWAMLATL 152
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 32.7 bits (73), Expect = 0.21 Identities = 34/123 (27%), Positives = 39/123 (31%), Gaps = 44/123 (35%) Frame = +1 Query: 163 TMRKIAAKAKQVSSGSP-WYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE- 336 T + KAK V S P W+ + P YL G GDYG+D GL E Sbjct: 37 TKKASPKKAKTVISDRPLWFPG----------AKSPEYLDGSLVGDYGFDPFGLGKPAEY 86 Query: 337 ----------TFAKN--------------------------------RELEVIHCRWAML 390 AKN RE E+IH RWAML Sbjct: 87 LQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAML 146 Query: 391 GAL 399 L Sbjct: 147 ATL 149 Score = 31.2 bits (69), Expect = 0.62 Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Frame = +1 Query: 232 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 VL +G + + + L E +PG +D GL++DP A+ + E+ H R AM+G L Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFL 251
>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator| of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) (CTG repeat p Length = 2517 Score = 32.3 bits (72), Expect = 0.28 Identities = 28/78 (35%), Positives = 34/78 (43%), Gaps = 14/78 (17%) Frame = +2 Query: 143 SLARPESPCA-RSQQRQSKFPPAAHGT------------VPTVC-STSAHSPVSPRATSP 280 S A SP + R+Q + P H T PTV STS SPV P AT P Sbjct: 1855 SHAHQHSPISPRTQDALQQRPSVLHNTGMKGIITAVEPSKPTVLRSTSTSSPVRPAATFP 1914 Query: 281 VSSLATMGGTLPDFQLTL 334 ++ +GGTL TL Sbjct: 1915 PATHCPLGGTLDGVYPTL 1932
>URE1_BACC1 (Q733J6) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 570 Score = 32.0 bits (71), Expect = 0.36 Identities = 16/60 (26%), Positives = 30/60 (50%) Frame = +1 Query: 7 ISTLTHLLENPYNRPFP*LSNGGSHHVHLLLDLCRQTVKNVPSSALFGEARVTMRKIAAK 186 I+ L ++L + N P N H+ +L+ +C N+P +F ++R+ IAA+ Sbjct: 290 IAALNNILPSSTNPTLPYTVNTLDEHLDMLM-VCHHLKANIPEDVMFADSRIRKETIAAE 348
>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 32.0 bits (71), Expect = 0.36 Identities = 20/61 (32%), Positives = 28/61 (45%) Frame = +1 Query: 196 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 375 VSS PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 376 R 378 R Sbjct: 180 R 180
>MAZ_MOUSE (P56671) Myc-associated zinc finger protein (MAZI) (Purine-binding| transcription factor) (Pur-1) Length = 477 Score = 32.0 bits (71), Expect = 0.36 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = +2 Query: 125 TYHLRLSLARPESPCARSQQRQSKFPPAAHGTVPTVCSTSAHSPVSPRATSPVSSL 292 T L+ A P P A S PPAA T+ +T+ +P S A +PV+S+ Sbjct: 124 TAALKQPPAPPPPPPAVSAPAAEAAPPAAAATIAAAAATAVVAPTSTVAVAPVASV 179
>MAZ_MESAU (P56670) Myc-associated zinc finger protein (MAZI) (Purine-binding| transcription factor) (Pur-1) (Fragment) Length = 331 Score = 32.0 bits (71), Expect = 0.36 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = +2 Query: 125 TYHLRLSLARPESPCARSQQRQSKFPPAAHGTVPTVCSTSAHSPVSPRATSPVSSL 292 T L+ A P P A S PPAA T+ +T+ +P S A +PV+S+ Sbjct: 111 TAALKQPPAPPPPPPAVSAPAAEAAPPAAAATIAAAAATAVVAPTSTVAVAPVASV 166
>UREA_ASPFU (Q6A3P9) Urease (EC 3.5.1.5) (Urea amidohydrolase)| Length = 838 Score = 32.0 bits (71), Expect = 0.36 Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 2/63 (3%) Frame = +1 Query: 4 IISTLTH--LLENPYNRPFP*LSNGGSHHVHLLLDLCRQTVKNVPSSALFGEARVTMRKI 177 IIS + H +L + N P N H+ +L+ +C KN+P F E+R+ I Sbjct: 557 IISVVEHPNVLPSSTNPTRPFTMNTLDEHLDMLM-VCHHLSKNIPEDVAFAESRIRAETI 615 Query: 178 AAK 186 AA+ Sbjct: 616 AAE 618
>NCOR2_MOUSE (Q9WU42) Nuclear receptor corepressor 2 (N-CoR2) (Silencing mediator| of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) Length = 2472 Score = 31.6 bits (70), Expect = 0.48 Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 16/76 (21%) Frame = +2 Query: 155 PESPCARSQQRQSKFPPAAHGT------------VPTVC----STSAHSPVSPRATSPVS 286 P SP R+Q + P H T PTV STS SPV P AT P + Sbjct: 1817 PISP--RTQDALQQRPSVLHNTSMKGVVTSVEPGTPTVLRWARSTSTSSPVRPAATFPPA 1874 Query: 287 SLATMGGTLPDFQLTL 334 + +GGTL TL Sbjct: 1875 THCPLGGTLEGVYPTL 1890
>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.2 bits (69), Expect = 0.62 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +1 Query: 154 ARVTMRKIAAKAKQ-VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 330 A +R I + VS+ PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHICKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 331 PETFAKNRELEVIHCR 378 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 31.2 bits (69), Expect = 0.62 Identities = 38/144 (26%), Positives = 48/144 (33%), Gaps = 49/144 (34%) Frame = +1 Query: 115 TVKNVPSSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEP----PSYLTG 282 T K ++A + T +K+A S+G+ G Y G P P +L G Sbjct: 10 TQKKAGTTATKPAPKATTKKVAT-----STGTRSGGVGYRKYQGDALWLPNTTRPEWLDG 64 Query: 283 EFPGDYGWDTAGLSADPE-----------TFAKN-------------------------- 351 PGD G+D GLS E AKN Sbjct: 65 SLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSENRLAPYS 124 Query: 352 --------RELEVIHCRWAMLGAL 399 RE E+IH RWAML L Sbjct: 125 EVFGLARFRECELIHGRWAMLACL 148
>WRKY6_ARATH (Q9C519) WRKY transcription factor 6 (WRKY DNA-binding protein 6)| (AtWRKY6) Length = 553 Score = 31.2 bits (69), Expect = 0.62 Identities = 20/51 (39%), Positives = 23/51 (45%) Frame = +2 Query: 146 LARPESPCARSQQRQSKFPPAAHGTVPTVCSTSAHSPVSPRATSPVSSLAT 298 LAR PC+ S S P PTV HSP P ++P SS AT Sbjct: 407 LARAVLPCSTSMATISASAP-----FPTVTLDLTHSPPPPNGSNPSSSAAT 452
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 30.8 bits (68), Expect = 0.81 Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = +1 Query: 112 QTVKNVPS-SALFGEARVTMRKIAAKAKQVSSGSPW 216 Q VK PS S + G R+TMRK A AK S SPW Sbjct: 16 QAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPW 49
>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 30.8 bits (68), Expect = 0.81 Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 1/78 (1%) Frame = +1 Query: 148 GEARVTMRKIAAKAKQ-VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 324 G A +R + VS+ PW+G ++ L G P + + FPG G G+ Sbjct: 107 GPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVG 166 Query: 325 ADPETFAKNRELEVIHCR 378 AD A R++ H R Sbjct: 167 ADR---AYGRDIVEAHYR 181
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 30.8 bits (68), Expect = 0.81 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = +1 Query: 232 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 399 VL +G + + S L E +PG Y +D GL+ADPE + E+ H R AM+ L Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254 Score = 30.4 bits (67), Expect = 1.1 Identities = 26/89 (29%), Positives = 29/89 (32%), Gaps = 43/89 (48%) Frame = +1 Query: 262 PPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------------------- 351 PP +L G GD G+D GL E AKN Sbjct: 65 PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124 Query: 352 -------------RELEVIHCRWAMLGAL 399 RE E+IH RWAMLG L Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTL 153
>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.8 bits (68), Expect = 0.81 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = +1 Query: 196 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 375 VS+ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 376 R 378 R Sbjct: 180 R 180
>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.8 bits (68), Expect = 0.81 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = +1 Query: 196 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 375 VS+ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSNQHPWFGMEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGADK---AYRRDIMEAHY 179 Query: 376 R 378 R Sbjct: 180 R 180
>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.8 bits (68), Expect = 0.81 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = +1 Query: 196 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 375 VS+ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 376 R 378 R Sbjct: 180 R 180
>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.8 bits (68), Expect = 0.81 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = +1 Query: 196 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 375 VS+ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 376 R 378 R Sbjct: 180 R 180
>GLNA_HEBCY (Q96UV5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 30.8 bits (68), Expect = 0.81 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +1 Query: 157 RVTMRKIAAKA-KQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 303 R R AAK +Q PW+G ++ L G P + G FPG G Sbjct: 105 RTNFRHHAAKVMEQAKEDVPWFGLEQEYTLFDADGSPYGWPKGGFPGPQG 154
>SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1496 Score = 30.8 bits (68), Expect = 0.81 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 6/69 (8%) Frame = -2 Query: 398 SAPSMAHRQWITSSSRFLAKVSGSAESPAVSHP*SPGNSPVR*LGG----SPES-GPR*S 234 SAP+ H Q + S+S+ L ++ S+ SP+ P +P P LG SPE+ GPR + Sbjct: 1347 SAPAAFHLQVLQSNSQLLQGLTCSSSSPSPPKPDTPLLYPQMALGTSSAISPETDGPRVT 1406 Query: 233 -TRSAPYHG 210 +A +HG Sbjct: 1407 EPEAASFHG 1415
>GSCR1_HUMAN (Q9NZM4) Glioma tumor suppressor candidate region gene 1 protein| Length = 1509 Score = 30.4 bits (67), Expect = 1.1 Identities = 23/63 (36%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = +2 Query: 164 PCARSQQRQSKFPPAAHGTVPTVCSTSAHSPVS-PRATSPVSSLATMGGTLPDFQLTLRP 340 P RSQQ S P H +VP SA P P +PV+ A +G PD Q + P Sbjct: 650 PQERSQQPLSAEGP--HLSVPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAP 707 Query: 341 LPR 349 P+ Sbjct: 708 APQ 710
>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein| kinase with no lysine 2) (Protein kinase, lysine-deficient 2) Length = 2297 Score = 30.4 bits (67), Expect = 1.1 Identities = 20/65 (30%), Positives = 28/65 (43%) Frame = +2 Query: 152 RPESPCARSQQRQSKFPPAAHGTVPTVCSTSAHSPVSPRATSPVSSLATMGGTLPDFQLT 331 +P P A Q + PP+ H TV + +T + P+ T P + TLP Q Sbjct: 909 QPVYPAAFPQMAPTDVPPSPHHTVQNMRATPPQPALPPQPTLPPQPVLPPQPTLPP-QPV 967 Query: 332 LRPLP 346 L P P Sbjct: 968 LPPQP 972
>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = +1 Query: 196 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 375 VS+ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADR---AYGRDIVEAHY 179 Query: 376 R 378 R Sbjct: 180 R 180
>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) Length = 392 Score = 30.4 bits (67), Expect = 1.1 Identities = 18/58 (31%), Positives = 28/58 (48%) Frame = +1 Query: 157 RVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 330 R T +KI + V+ PW+G ++ L ++G P + FPG G G+ AD Sbjct: 114 RHTCKKIM---EMVNDHRPWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168
>SCEL_MOUSE (Q9EQG3) Sciellin| Length = 652 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 6/50 (12%) Frame = +2 Query: 179 QQRQSKFPPA--AHGTVPTVCST----SAHSPVSPRATSPVSSLATMGGT 310 ++RQS FPP H P+ ++ + H P+ P+ SP++S +G T Sbjct: 133 KKRQSWFPPPPPGHNASPSTAASRRDPALHPPLPPKPCSPIASPKPLGRT 182
>GLNA_CHICK (P16580) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 30.0 bits (66), Expect = 1.4 Identities = 23/74 (31%), Positives = 33/74 (44%) Frame = +1 Query: 157 RVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 336 R T R+I VS+ PW+G ++ L G P + + FPG G G+ AD Sbjct: 114 RHTCRRIM---DMVSNQHPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK- 169 Query: 337 TFAKNRELEVIHCR 378 A R++ H R Sbjct: 170 --AYGRDIVEAHYR 181
>AUTS2_HUMAN (Q8WXX7) Autism susceptibility gene 2 protein| Length = 1259 Score = 30.0 bits (66), Expect = 1.4 Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%) Frame = +2 Query: 161 SPCARSQQRQ-SKFPP-AAHGTVPTVCSTSAHSPVSPRATSPVSS 289 SP A +Q +K PP AA P + ST PVSPR T+P+S+ Sbjct: 1198 SPTAGNQNGLLNKTPPTAALSAPPPLISTLGGRPVSPRRTTPLSA 1242
>VASN_MOUSE (Q9CZT5) Vasorin precursor (Protein Slit-like 2)| Length = 673 Score = 29.6 bits (65), Expect = 1.8 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 8/52 (15%) Frame = +2 Query: 218 TVPTV--------CSTSAHSPVSPRATSPVSSLATMGGTLPDFQLTLRPLPR 349 TVPT+ STS+ +P P T P + +T+ T P T+RP P+ Sbjct: 358 TVPTIRSTIREPTLSTSSQAPTWPSLTEPTTQASTVLSTAPP---TMRPAPQ 406
>KAD7_HUMAN (Q96M32) Putative adenylate kinase 7 (EC 2.7.4.3)| Length = 723 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/45 (35%), Positives = 25/45 (55%) Frame = -1 Query: 192 LCLCCDLAHGDSGLAKESRRWYVLHRLPAKVEEEMDMVAAAIGKL 58 +C+ A G S +AKE ++Y LH + K D+++ AI KL Sbjct: 370 ICILGPPAVGKSSIAKELAKYYKLHHIQLK-----DVISEAIAKL 409
>YQU3_CAEEL (Q09550) Hypothetical protein F26C11.3 precursor| Length = 1317 Score = 29.6 bits (65), Expect = 1.8 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Frame = +2 Query: 185 RQSKFPPAAHGTVPTVCSTSAHSPVSPRATSPVSSLATMG-----GTLPDFQLTLRPLPR 349 R S+ P++ TVPT STS S SP A + SS + T+P+ T+ P Sbjct: 347 RTSEDKPSSSTTVPTSASTSESSTSSPMAETSSSSTTSQSSPASTSTVPE-SSTVGSTPT 405 Query: 350 TG 355 TG Sbjct: 406 TG 407
>GLNA1_DROME (P20477) Glutamine synthetase 1, mitochondrial precursor (EC| 6.3.1.2) (Glutamate--ammonia ligase 1) Length = 399 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/63 (26%), Positives = 26/63 (41%) Frame = +1 Query: 196 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 375 +S PW+G ++ L + G P + FP G G+ AD E V+ C Sbjct: 161 ISDQEPWFGIEQEYTLLDVDGRPFGWPENGFPAPQGPYYCGVGADRVYARDLVEAHVVAC 220 Query: 376 RWA 384 +A Sbjct: 221 LYA 223
>URE1_NATPD (Q3IRZ5) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 570 Score = 29.3 bits (64), Expect = 2.4 Identities = 15/55 (27%), Positives = 26/55 (47%) Frame = +1 Query: 22 HLLENPYNRPFP*LSNGGSHHVHLLLDLCRQTVKNVPSSALFGEARVTMRKIAAK 186 H+L + N P N H+ +++ +C +VP F E+R+ IAA+ Sbjct: 294 HMLPSSTNPSMPYTENTFDEHLDMVM-VCHHLNPDVPEDVAFAESRIRAETIAAE 347
>STE12_EMENI (O74252) Transcription factor steA| Length = 692 Score = 29.3 bits (64), Expect = 2.4 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 7/70 (10%) Frame = +2 Query: 122 RTYHLRLSLARPESPCARSQQRQSKFPPAAHGTVPT-------VCSTSAHSPVSPRATSP 280 RT+H + SP + ++R+S PP A V T S +AH P R + Sbjct: 393 RTFHSNVYSVLEGSPTYKQRRRRSSIPPGAANPVTTGTHSPAPALSYAAHKPSDLRRS-- 450 Query: 281 VSSLATMGGT 310 VSS G T Sbjct: 451 VSSSVAPGDT 460
>STE20_YEAST (Q03497) Serine/threonine-protein kinase STE20 (EC 2.7.11.1)| Length = 939 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/68 (26%), Positives = 26/68 (38%) Frame = +2 Query: 155 PESPCARSQQRQSKFPPAAHGTVPTVCSTSAHSPVSPRATSPVSSLATMGGTLPDFQLTL 334 P+ P + S P + H+P +P TSP S + TL + L Sbjct: 477 PKPPSSASASAPIIKSPVMNSAANVSPLKQTHAPTTPNRTSPNRSSISRNATLKKEEQPL 536 Query: 335 RPLPRTGS 358 P+P T S Sbjct: 537 PPIPPTKS 544
>PACC_EMENI (Q00202) pH-response transcription factor pacC/RIM101| Length = 678 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/45 (40%), Positives = 23/45 (51%), Gaps = 7/45 (15%) Frame = +2 Query: 203 PAAHGTV-----PTVCSTSAHSPVS--PRATSPVSSLATMGGTLP 316 P+AH T P + +TSAHSP S P T P S+ + G P Sbjct: 391 PSAHATTQTTAGPIISNTSAHSPSSSTPALTPPSSAQSYTSGRSP 435
>ARNT_DROME (O15945) Aryl hydrocarbon receptor nuclear translocator homolog| (dARNT) (Protein tango) (Hypoxia-inducible factor 1 beta) Length = 644 Score = 29.3 bits (64), Expect = 2.4 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 4/65 (6%) Frame = +2 Query: 158 ESPCARSQQRQSKFPPAAHGTVPTVCSTSAHSPVSPRATSPVSSLATMGGT----LPDFQ 325 ++P + QQ+Q + P +A T + HSP S SP++ + G + P+ Sbjct: 452 QAPTPQQQQQQQQRPGSAQTTPVGYTYDTTHSPYSAGGPSPLAKIPKSGTSPTPVAPNSW 511 Query: 326 LTLRP 340 LRP Sbjct: 512 AALRP 516
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/36 (52%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = +1 Query: 112 QTVKNVPS-SALFGEARVTMRKIAAKAKQVSSGSPW 216 Q VK PS S G R+TMRK A AK S SPW Sbjct: 16 QAVKLSPSASENSGNGRITMRK--AVAKSAPSSSPW 49
>ANK2_HUMAN (Q01484) Ankyrin-2 (Brain ankyrin) (Ankyrin-B) (Ankyrin,| nonerythroid) Length = 3924 Score = 28.9 bits (63), Expect = 3.1 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 7/55 (12%) Frame = +2 Query: 155 PESPCARSQQRQSKFPPAA---HGTVPTVCSTSAHSPVSPRAT----SPVSSLAT 298 P SP +++++ P A H + T HSPVSP SPVSS T Sbjct: 1811 PVSPSSKTEKHSPVSPSAKTERHSPASSSSKTEKHSPVSPSTKTERHSPVSSTKT 1865
>Y907_MYCBO (P64740) Hypothetical protein Mb0907c| Length = 253 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = +2 Query: 194 KFPPAAHGTVPTVCSTSAHSPVSPRATSPVSSLA 295 +F P AHG T +AH ++P P+ LA Sbjct: 170 RFTPGAHGGTATAIDDTAHELINPTFNRPLRPLA 203
>Y883_MYCTU (P64739) Hypothetical protein Rv0883c/MT0906| Length = 253 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = +2 Query: 194 KFPPAAHGTVPTVCSTSAHSPVSPRATSPVSSLA 295 +F P AHG T +AH ++P P+ LA Sbjct: 170 RFTPGAHGGTATAIDDTAHELINPTFNRPLRPLA 203
>VGP3_EBVP3 (P68344) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Frame = +2 Query: 203 PAAHGTVPTVCSTSAHSPVS---PRATSPVSSLATMGGTLPDFQLTLRPLPRTGS 358 P + T+PT+ TS S V+ P ATSP T+G T P T L T S Sbjct: 565 PTPNATIPTLGKTSPTSAVTTPTPNATSP-----TVGETSPQANTTNHTLGGTSS 614
>VGP3_EBVA8 (P68343) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 28.9 bits (63), Expect = 3.1 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 3/55 (5%) Frame = +2 Query: 203 PAAHGTVPTVCSTSAHSPVS---PRATSPVSSLATMGGTLPDFQLTLRPLPRTGS 358 P + T+PT+ TS S V+ P ATSP T+G T P T L T S Sbjct: 565 PTPNATIPTLGKTSPTSAVTTPTPNATSP-----TVGETSPQANTTNHTLGGTSS 614
>RIMS1_RAT (Q9JIR4) Regulating synaptic membrane exocytosis protein 1| (Rab3-interacting molecule 1) (RIM 1) Length = 1615 Score = 28.9 bits (63), Expect = 3.1 Identities = 16/43 (37%), Positives = 19/43 (44%) Frame = +2 Query: 155 PESPCARSQQRQSKFPPAAHGTVPTVCSTSAHSPVSPRATSPV 283 PESP AR+ Q PP HG P + P PR P+ Sbjct: 445 PESPRARAAAAQ---PPTEHGPPPPRPAPGPAEPPEPRVPEPL 484
>MRP7_ARATH (Q9LK62) Multidrug resistance-associated protein 7 (EC 3.6.3.44)| (Glutathione S-conjugate transporting ATPase 7) (ATP-energized glutathione S-conjugate pump 7) Length = 1493 Score = 28.5 bits (62), Expect = 4.0 Identities = 12/26 (46%), Positives = 19/26 (73%) Frame = -2 Query: 380 HRQWITSSSRFLAKVSGSAESPAVSH 303 +RQ+ S++R LA++SG + SP V H Sbjct: 1076 YRQYYISAARELARLSGISRSPLVQH 1101
>MAZ_HUMAN (P56270) Myc-associated zinc finger protein (MAZI) (Purine-binding| transcription factor) (Pur-1) (ZF87) (ZIF87) Length = 477 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/55 (30%), Positives = 25/55 (45%) Frame = +2 Query: 125 TYHLRLSLARPESPCARSQQRQSKFPPAAHGTVPTVCSTSAHSPVSPRATSPVSS 289 T L+ A P P S PPA+ T+ +T+ +P S A +PV+S Sbjct: 124 TAALKQPPAPPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVAS 178
>HAM1_ACIAD (Q6FEQ6) HAM1 protein homolog| Length = 210 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/77 (28%), Positives = 34/77 (44%) Frame = +1 Query: 85 VHLLLDLCRQTVKNVPSSALFGEARVTMRKIAAKAKQVSSGSPWYGADRVLYLGPLSGEP 264 + L +D+ Q N+P + G + V I A+ SG P D + + L G P Sbjct: 32 LQLPVDVIPQGQLNIPDAIEDGLSFVENAIIKARHASKISGKPAIADDSGICVPVLGGAP 91 Query: 265 PSYLTGEFPGDYGWDTA 315 Y + + GD+G D A Sbjct: 92 GIY-SARYAGDHGNDAA 107
>LYS2_ASHGO (Q75BB3) L-aminoadipate-semialdehyde dehydrogenase large subunit| (EC 1.2.1.31) (Alpha-aminoadipate reductase) (Alpha-AR) Length = 1385 Score = 28.5 bits (62), Expect = 4.0 Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 11/94 (11%) Frame = +2 Query: 143 SLARPESPCARSQQRQSKFPPA------AHGTVPTVCSTSAHSPVSPRATSPVSSLAT-- 298 S+ P P AR PA A G + +S +A P +L T Sbjct: 321 SVIDPAYPPARQNVYLGVAKPAGLIVIQAAGQLDEAVEAFIRDNLSLKARLPALALQTDG 380 Query: 299 --MGGTLPDFQL-TLRPLPRTGSWR*SIADGPCS 391 +GGTLPDF L TL P + R + GP S Sbjct: 381 AILGGTLPDFHLDTLVPFASLKNTRTDVVVGPDS 414
>KAD7_MACFA (Q95JP6) Putative adenylate kinase 7 (EC 2.7.4.3) (Fragment)| Length = 533 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = -1 Query: 192 LCLCCDLAHGDSGLAKESRRWYVLHRLPAKVEEEMDMVAAAIGKL 58 +C+ A G S +A+E ++Y LH + K D+++ AI KL Sbjct: 180 ICILGPPAVGKSSIAEELAKYYKLHHIQLK-----DVISEAIAKL 219
>GLNA_TUBBO (Q86ZU6) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 358 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +1 Query: 211 PWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 303 PW+G ++ L L G P + G FPG G Sbjct: 128 PWFGLEQEYTLFDLYGNPYGWPKGGFPGPQG 158
>EFP_VIBPA (Q87KX9) Elongation factor P (EF-P)| Length = 188 Score = 28.1 bits (61), Expect = 5.3 Identities = 22/77 (28%), Positives = 32/77 (41%), Gaps = 9/77 (11%) Frame = +1 Query: 163 TMRKIAAKAKQVSSGSPWYGADRVLYL-----GPLSGEPPSY----LTGEFPGDYGWDTA 315 T +IAA AK V + W + + P++ PP++ +T PG G DT Sbjct: 89 TFEQIAADAKAVGENAKWLVENNTCMITLWNGNPITVTPPNFVELEVTDTDPGLKG-DTQ 147 Query: 316 GLSADPETFAKNRELEV 366 G P T A + V Sbjct: 148 GTGGKPATLATGAVVRV 164
>SCEL_HUMAN (O95171) Sciellin| Length = 668 Score = 28.1 bits (61), Expect = 5.3 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 6/43 (13%) Frame = +2 Query: 179 QQRQSKFPP------AAHGTVPTVCSTSAHSPVSPRATSPVSS 289 ++RQS FPP A+ T H P+ P+ +SPVSS Sbjct: 158 KKRQSWFPPPPPGYNASSSTGTRRREPGVHPPIPPKPSSPVSS 200
>LDHA_PONPY (Q5R5F0) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A) (LDH| muscle subunit) (LDH-M) Length = 331 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = -1 Query: 249 WAEVEHTVGTVPWAAGGNLLCLCCDLAHGDSGLAKESRRWYVLHR 115 W EH +VP +G N+ + H D G K+ +W +H+ Sbjct: 187 WVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHK 231
>LDHA_PANTR (Q5R1W9) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A) (LDH| muscle subunit) (LDH-M) Length = 331 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = -1 Query: 249 WAEVEHTVGTVPWAAGGNLLCLCCDLAHGDSGLAKESRRWYVLHR 115 W EH +VP +G N+ + H D G K+ +W +H+ Sbjct: 187 WVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHK 231
>LDHA_MACFA (Q9BE24) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A) (LDH| muscle subunit) (LDH-M) Length = 331 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = -1 Query: 249 WAEVEHTVGTVPWAAGGNLLCLCCDLAHGDSGLAKESRRWYVLHR 115 W EH +VP +G N+ + H D G K+ +W +H+ Sbjct: 187 WVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHK 231
>LDHA_HUMAN (P00338) L-lactate dehydrogenase A chain (EC 1.1.1.27) (LDH-A) (LDH| muscle subunit) (LDH-M) (Proliferation-inducing gene 19 protein) (NY-REN-59 antigen) Length = 331 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = -1 Query: 249 WAEVEHTVGTVPWAAGGNLLCLCCDLAHGDSGLAKESRRWYVLHR 115 W EH +VP +G N+ + H D G K+ +W +H+ Sbjct: 187 WVLGEHGDSSVPVWSGMNVAGVSLKTLHPDLGTDKDKEQWKEVHK 231
>KAD7_MOUSE (Q9D2H2) Putative adenylate kinase 7 (EC 2.7.4.3)| Length = 614 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/45 (33%), Positives = 25/45 (55%) Frame = -1 Query: 192 LCLCCDLAHGDSGLAKESRRWYVLHRLPAKVEEEMDMVAAAIGKL 58 +C+ A G S +++E ++Y LH + K D++A AI KL Sbjct: 261 ICILGPPAVGKSSISEELAKYYKLHHIKMK-----DVIAEAIAKL 300
>GLNA_AMAMU (Q8X169) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +1 Query: 157 RVTMRKIAAKAKQVSSGS-PWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 303 R R AK +++ PW+G ++ L G P + G FPG G Sbjct: 105 RTNHRHHTAKVMELAKDEIPWFGIEQEYTLFDADGSPYGWPKGGFPGPQG 154
>GUN1_RALSO (P58599) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) Length = 424 Score = 28.1 bits (61), Expect = 5.3 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = +1 Query: 181 AKAKQVSSGSP---WYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 351 AK QV+ G+ W G V G GE G PG YG + SAD T+ KN Sbjct: 103 AKVCQVAQGTGTLLWRG---VSLAGAEFGE------GSLPGTYGSNYIYPSADSATYYKN 153 Query: 352 RELEVIHC--RWAML 390 + + ++ RW L Sbjct: 154 KGMNLVRLPFRWERL 168
>SYNPO_MOUSE (Q8CC35) Synaptopodin| Length = 929 Score = 27.7 bits (60), Expect = 6.9 Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 2/67 (2%) Frame = +2 Query: 113 RR*RTYHLRLSLARPESPCARSQQRQSKFP--PAAHGTVPTVCSTSAHSPVSPRATSPVS 286 RR R L SP + Q+ P P H P+V TS P SP+ SP S Sbjct: 171 RRQRVNEFTLESRGQRSPKLNQEALQTGRPLSPIGHAPGPSVKPTSPSKPGSPKHPSPQS 230 Query: 287 SLATMGG 307 + G Sbjct: 231 PSRGVAG 237
>D2HDH_HUMAN (Q8N465) D-2-hydroxyglutarate dehydrogenase, mitochondrial| precursor (EC 1.1.99.-) Length = 521 Score = 27.7 bits (60), Expect = 6.9 Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%) Frame = -3 Query: 388 AWP--IGNGSPPAPGSWQRSQGQLKVRQC 308 AWP + G+P A GSW R G L R C Sbjct: 8 AWPAWLLRGAPGAAGSWGRPVGPLARRGC 36
>ABFB_STRLI (P96463) Alpha-L-arabinofuranosidase precursor (EC 3.2.1.55)| (Arabinosidase) Length = 475 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +1 Query: 250 LSGEPPSYLTGEFPGDYGWDTAGLSADPET 339 L+G PP+ T P Y W + G+ A P++ Sbjct: 166 LTGTPPTDGTCALPSTYRWSSTGVLAQPKS 195
>ABFB_STRCO (O54161) Alpha-L-arabinofuranosidase precursor (EC 3.2.1.55)| (Arabinosidase) Length = 475 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +1 Query: 250 LSGEPPSYLTGEFPGDYGWDTAGLSADPET 339 L+G PP+ T P Y W + G+ A P++ Sbjct: 166 LTGTPPTDGTCALPSTYRWSSTGVLAQPKS 195
>Y4QD_RHISN (P55625) Hypothetical 26.8 kDa protein y4qD| Length = 244 Score = 27.7 bits (60), Expect = 6.9 Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 2/94 (2%) Frame = -1 Query: 300 IVARELTGEVARGLTGEWAEVEHTVGTVPWAAGGNLL--CLCCDLAHGDSGLAKESRRWY 127 ++ARE GE+A L GE +E + +P G L+ ++AH D + + Sbjct: 55 VLARETLGEIAGDLGGELNGMELCLRALPRPNAGRLVDAATANEIAHVDGDVLVFTENLV 114 Query: 126 VLHRLPAKVEEEMDMVAAAIGKLREGSIVWVLKE 25 + + ++ D A + K + G + VL + Sbjct: 115 IDFDVIERLLRSQDRNIAVVSKTQGGRSLRVLAD 148
>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)| (Trinucleotide repeat-containing gene 13 protein) Length = 1312 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/50 (32%), Positives = 25/50 (50%) Frame = +2 Query: 161 SPCARSQQRQSKFPPAAHGTVPTVCSTSAHSPVSPRATSPVSSLATMGGT 310 SP A+ R + A G++ + +H+P S AT PV+ + GGT Sbjct: 623 SPKAQRHPRNHRVS-AGRGSISSGLEFVSHNPPSEAATPPVARTSPSGGT 671
>YK91_SCHPO (Q9HE11) Hypothetical protein C20H4.01 in chromosome I| Length = 666 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 1/38 (2%) Frame = -1 Query: 321 KSGSVPPIVARELTGEVARGLTGEWAEVEHTV-GTVPW 211 +S PPIV + E LT W E TV TVPW Sbjct: 328 RSRGDPPIVLESIAFESTDSLTVVWKESTRTVFETVPW 365
>S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington| disease gene regulatory region-binding protein 1) (HDBP-1) Length = 387 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +1 Query: 262 PPSYLTGEFPGDYGWDTAGLSADPET 339 P SY + GD+GWD A + P T Sbjct: 145 PGSYSSSSNSGDWGWDLASDQSSPST 170
>CCD71_BOVIN (Q2HJ91) Coiled-coil domain-containing protein 71| Length = 452 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +2 Query: 224 PTVCSTSAHSPVSPRATSPVSSLATMGGTLPDFQLTLRPLPRTG 355 P+ A +P +P ATSP +S LP + TL P+P +G Sbjct: 81 PSQTKLQARAP-TPAATSPPASAPQTAVRLPAGRATLLPMPLSG 123
>CHLN_SYNP7 (P54208) Light-independent protochlorophyllide reductase subunit N| (EC 1.18.-.-) (LI-POR subunit N) (DPOR subunit N) Length = 466 Score = 27.7 bits (60), Expect = 6.9 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 2/82 (2%) Frame = +2 Query: 122 RTYHLRLSLARPESPCARSQQRQSKFPP-AAHGTVPTVCSTSAHSPVSPRATSPVSSLA- 295 RT ++ L +SP A Q SK PP G+VP PV+ + T ++ Sbjct: 172 RTNAIQRLLQFGKSPAAEQQPASSKHPPLILFGSVP--------DPVATQLTIELAKQGI 223 Query: 296 TMGGTLPDFQLTLRPLPRTGSW 361 T+ G LP + T P+ GS+ Sbjct: 224 TVSGWLPAKRYTELPVIAEGSY 245
>CHLN_SYNP6 (Q5N5U2) Light-independent protochlorophyllide reductase subunit N| (EC 1.18.-.-) (LI-POR subunit N) (DPOR subunit N) Length = 466 Score = 27.7 bits (60), Expect = 6.9 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 2/82 (2%) Frame = +2 Query: 122 RTYHLRLSLARPESPCARSQQRQSKFPP-AAHGTVPTVCSTSAHSPVSPRATSPVSSLA- 295 RT ++ L +SP A Q SK PP G+VP PV+ + T ++ Sbjct: 172 RTNAIQRLLQFGKSPAAEQQPASSKHPPLILFGSVP--------DPVATQLTIELAKQGI 223 Query: 296 TMGGTLPDFQLTLRPLPRTGSW 361 T+ G LP + T P+ GS+ Sbjct: 224 TVSGWLPAKRYTELPVIAEGSY 245
>XTH5_ARATH (Q9XIW1) Probable xyloglucan endotransglucosylase/hydrolase protein| 5 precursor (EC 2.4.1.207) (At-XTH5) (XTH-5) Length = 293 Score = 27.7 bits (60), Expect = 6.9 Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 6/85 (7%) Frame = +1 Query: 67 NGGSHHVHLLLDLCRQTVKNVPSSALFGEARVTMRKIA------AKAKQVSSGSPWYGAD 228 NGGS VHL+LD T S LFG + ++ +A A +SS + + Sbjct: 49 NGGSE-VHLVLDKYTGTGFQSKGSYLFGHFSMHIKMVAGDSAGTVTAFYLSSQNSEHDEI 107 Query: 229 RVLYLGPLSGEPPSYLTGEFPGDYG 303 +LG +G+P T F G G Sbjct: 108 DFEFLGNRTGQPYILQTNVFTGGAG 132
>GLNA_SQUAC (P41320) Glutamine synthetase, mitochondrial precursor (EC 6.3.1.2)| (Glutamate--ammonia ligase) Length = 403 Score = 27.7 bits (60), Expect = 6.9 Identities = 17/61 (27%), Positives = 28/61 (45%) Frame = +1 Query: 196 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 375 +++ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 153 IANEYPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHY 209 Query: 376 R 378 R Sbjct: 210 R 210
>CCD71_HUMAN (Q8IV32) Coiled-coil domain-containing protein 71| Length = 467 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +2 Query: 224 PTVCSTSAHSPVSPRATSPVSSLATMGGTLPDFQLTLRPLPRTG 355 P+ A +P +P ATSP +S LP + TL P+P +G Sbjct: 81 PSQTKLQARAP-NPTATSPPASAPRTAMRLPAGRATLLPMPLSG 123
>URE1_SYNY3 (P73061) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 569 Score = 27.7 bits (60), Expect = 6.9 Identities = 15/55 (27%), Positives = 27/55 (49%) Frame = +1 Query: 22 HLLENPYNRPFP*LSNGGSHHVHLLLDLCRQTVKNVPSSALFGEARVTMRKIAAK 186 ++L + N P N H+ +L+ +C +N+P F E+R+ IAA+ Sbjct: 294 NVLPSSTNPTRPYTINTLEEHLDMLM-VCHHLHRNIPEDVAFAESRIRRETIAAE 347
>PQE1_CAEEL (Q10124) Putative RNA exonuclease pqe-1 (PolyQ enhancer protein 1)| Length = 1647 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/58 (27%), Positives = 25/58 (43%) Frame = +2 Query: 173 RSQQRQSKFPPAAHGTVPTVCSTSAHSPVSPRATSPVSSLATMGGTLPDFQLTLRPLP 346 RSQ ++ PP VP +A P P + SPV+ + D + + P+P Sbjct: 550 RSQPAPARVPPQVPSQVPVTGGVAADEPPPPCSYSPVAQSSESKIEPVDVKPRVAPVP 607
>URE1_BLOFL (Q7VRS6) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 567 Score = 27.7 bits (60), Expect = 6.9 Identities = 16/60 (26%), Positives = 28/60 (46%) Frame = +1 Query: 7 ISTLTHLLENPYNRPFP*LSNGGSHHVHLLLDLCRQTVKNVPSSALFGEARVTMRKIAAK 186 I L ++L + N P N H+ +++ +C N+P F E+R+ IAA+ Sbjct: 287 ICELNNVLPSSTNPTLPYTINTVDEHLDMMM-VCHNLNCNLPEDIAFAESRIRRETIAAE 345
>IL1B_CANFA (Q28292) Interleukin-1 beta precursor (IL-1 beta) (Fragment)| Length = 127 Score = 27.7 bits (60), Expect = 6.9 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = -1 Query: 204 GGNLLCLCCDLAHGDSGLAKESRRWYVLHRLPAKVEEEMDMVAAAIGKLRE 52 G N+ C C DL H S L E + V H+L K V A+ KL++ Sbjct: 4 GSNVKCCCQDLNH--SSLVDEGIQLQVSHQLCNKSLRHFVSVIVALEKLKK 52
>APC_RAT (P70478) Adenomatous polyposis coli protein (Protein APC)| Length = 2842 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +2 Query: 236 STSAHSPVSPRATSPVSSLATMGGTLPDFQLTLRPLPRTGSWR 364 S+ SP +A +PV S +LPD L+ P + G WR Sbjct: 2468 SSRPDSPTRSQAQTPVLS-----PSLPDMSLSTHPSVQAGGWR 2505
>URE1_BACHD (Q9KG59) Urease alpha subunit (EC 3.5.1.5) (Urea amidohydrolase| alpha subunit) Length = 571 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/60 (26%), Positives = 29/60 (48%) Frame = +1 Query: 7 ISTLTHLLENPYNRPFP*LSNGGSHHVHLLLDLCRQTVKNVPSSALFGEARVTMRKIAAK 186 ++ L ++L + N P N H+ +L+ +C NVP F ++R+ IAA+ Sbjct: 290 VAGLPNVLPSSTNPTRPFTVNTIDEHLDMLM-VCHHLDPNVPEDVAFADSRIRPETIAAE 348
>EPSF1_RALSO (P58595) EPS I polysaccharide export inner membrane protein epsF| Length = 418 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +1 Query: 133 SSALFGEARVTMRKIAAKAKQVSSGSPW 216 + A+FG A M KI A+ + +GS W Sbjct: 271 AGAVFGSAEFVMSKIQARLSESQTGSAW 298
>GLYA_BARQU (Q6G009) Serine hydroxymethyltransferase (EC 2.1.2.1) (Serine| methylase) (SHMT) Length = 437 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%) Frame = +1 Query: 67 NGGSHHVHLLLDLCRQTVKNVPSSALFGEARVTMRKIA----AKAKQVSSG 207 +GG+ + LL+DLC + V + G A +T K A +A V+SG Sbjct: 319 SGGTDNHLLLVDLCSKKVTGKRAELALGRAHITCNKNAIPFDLQAPSVTSG 369
>Y2082_MYCTU (Q10690) Hypothetical protein Rv2082| Length = 721 Score = 27.3 bits (59), Expect = 9.0 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 9/71 (12%) Frame = +2 Query: 161 SPCARSQQRQSKFPPAA------HGTVPTVCSTSAHS---PVSPRATSPVSSLATMGGTL 313 +P A S + PP A GT P V S+S+ S P +P TSP + G Sbjct: 211 APSAPSHSTTTSGPPTAPTPTSPFGTAPMVLSSSSTSSGPPTAPTPTSPFGTAPMPPGPP 270 Query: 314 PDFQLTLRPLP 346 P ++ PLP Sbjct: 271 PPGTVS-PPLP 280
>APC_MOUSE (Q61315) Adenomatous polyposis coli protein (Protein APC) (mAPC)| Length = 2845 Score = 27.3 bits (59), Expect = 9.0 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = +2 Query: 236 STSAHSPVSPRATSPVSSLATMGGTLPDFQLTLRPLPRTGSWR 364 S+ SP +A +PV S +LPD L+ P + G WR Sbjct: 2468 SSRPDSPTRSQAQTPVLS-----PSLPDMSLSTHPSVQAGGWR 2505
>DOCK_SULAC (P27414) Probable signal recognition particle protein (Docking| protein) (P41) Length = 369 Score = 27.3 bits (59), Expect = 9.0 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = +1 Query: 292 GDYGWDTAGLSADPETFAKNRELEVI 369 G YG D A ++ D +FAK+R ++V+ Sbjct: 234 GKYGADPASVAFDAISFAKSRNIDVV 259 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 66,900,810 Number of Sequences: 219361 Number of extensions: 1439185 Number of successful extensions: 5224 Number of sequences better than 10.0: 155 Number of HSP's better than 10.0 without gapping: 4886 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5193 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
