ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet65b11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY105035.1| Zea mays PCO062034 mRNA sequence Length = 936 Score = 117 bits (59), Expect = 3e-23 Identities = 68/71 (95%) Strand = Plus / Plus Query: 304 cgtgctgcaggggaagtacgagctggggcgggtgctggggcacggcaacttcggccgggt 363 ||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 317 cgtgctgcaggggcggtacgagctggggcgggtgctggggcacggcaacttcgggcgggt 376 Query: 364 gcacgcggcgc 374 ||||||||||| Sbjct: 377 gcacgcggcgc 387 Score = 77.8 bits (39), Expect = 2e-11 Identities = 63/71 (88%) Strand = Plus / Plus Query: 129 ctgacctcgccggcaagcatagcctgcgcggcggccgcaattgccaccgcaagcacgtcg 188 ||||||| ||||| |||| | ||||||| | |||||||| ||||||||||||||||||| Sbjct: 119 ctgaccttgccggaaagcgcaacctgcgcagtggccgcaactgccaccgcaagcacgtcg 178 Query: 189 aggacgggtag 199 ||||||||||| Sbjct: 179 aggacgggtag 189
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 97.6 bits (49), Expect = 2e-17 Identities = 93/107 (86%), Gaps = 3/107 (2%) Strand = Plus / Plus Query: 96 gggaatgcggagcaatgtggagaagcacgcgcact---gacctcgccggcaagcatagcc 152 ||||||||||||||||| || | || ||||||| |||||||||||||| | |||| Sbjct: 14972550 gggaatgcggagcaatgcggcggcgcgggcgcactgacgacctcgccggcaaccgcagcc 14972609 Query: 153 tgcgcggcggccgcaattgccaccgcaagcacgtcgaggacgggtag 199 | |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 14972610 tccgcggcggccgcaactgccaccgcaagcacgtcgaggacgggtag 14972656 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 305 gtgctgcaggggaagtacgagctggggcgggtgctggggcacggcaacttcggccgggtg 364 |||||| |||||| ||||||| |||||||||||||||| |||||||||||||| || ||| Sbjct: 14972702 gtgctggaggggaggtacgagatggggcgggtgctgggccacggcaacttcggtcgtgtg 14972761 Query: 365 cacgcggcgc 374 |||||||||| Sbjct: 14972762 cacgcggcgc 14972771
>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0701F11 Length = 154950 Score = 97.6 bits (49), Expect = 2e-17 Identities = 93/107 (86%), Gaps = 3/107 (2%) Strand = Plus / Plus Query: 96 gggaatgcggagcaatgtggagaagcacgcgcact---gacctcgccggcaagcatagcc 152 ||||||||||||||||| || | || ||||||| |||||||||||||| | |||| Sbjct: 41996 gggaatgcggagcaatgcggcggcgcgggcgcactgacgacctcgccggcaaccgcagcc 42055 Query: 153 tgcgcggcggccgcaattgccaccgcaagcacgtcgaggacgggtag 199 | |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 42056 tccgcggcggccgcaactgccaccgcaagcacgtcgaggacgggtag 42102 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 305 gtgctgcaggggaagtacgagctggggcgggtgctggggcacggcaacttcggccgggtg 364 |||||| |||||| ||||||| |||||||||||||||| |||||||||||||| || ||| Sbjct: 42148 gtgctggaggggaggtacgagatggggcgggtgctgggccacggcaacttcggtcgtgtg 42207 Query: 365 cacgcggcgc 374 |||||||||| Sbjct: 42208 cacgcggcgc 42217
>ref|XM_482621.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1356 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 305 gtgctgcaggggaagtacgagctggggcgggtgctggggcacggcaacttcggccgggtg 364 ||||||||||||| ||||||| ||||||||||||| || |||||||||||||| |||||| Sbjct: 52 gtgctgcaggggaggtacgagatggggcgggtgctcggccacggcaacttcgggcgggtg 111 Query: 365 cacgcggcgc 374 |||| ||||| Sbjct: 112 cacgtggcgc 121
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 305 gtgctgcaggggaagtacgagctggggcgggtgctggggcacggcaacttcggccgggtg 364 ||||||||||||| ||||||| ||||||||||||| || |||||||||||||| |||||| Sbjct: 21459824 gtgctgcaggggaggtacgagatggggcgggtgctcggccacggcaacttcgggcgggtg 21459883 Query: 365 cacgcggcgc 374 |||| ||||| Sbjct: 21459884 cacgtggcgc 21459893 Score = 79.8 bits (40), Expect = 6e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 152 ctgcgcggcggccgcaattgccaccgcaagcacgtcgaggacgggtagatcc 203 |||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 21459665 ctgcgcggcggccgcacctgccaccggaagcacgtcgaggacgggtagatcc 21459716
>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0528B09 Length = 156897 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 305 gtgctgcaggggaagtacgagctggggcgggtgctggggcacggcaacttcggccgggtg 364 ||||||||||||| ||||||| ||||||||||||| || |||||||||||||| |||||| Sbjct: 63819 gtgctgcaggggaggtacgagatggggcgggtgctcggccacggcaacttcgggcgggtg 63878 Query: 365 cacgcggcgc 374 |||| ||||| Sbjct: 63879 cacgtggcgc 63888 Score = 79.8 bits (40), Expect = 6e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 152 ctgcgcggcggccgcaattgccaccgcaagcacgtcgaggacgggtagatcc 203 |||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 63660 ctgcgcggcggccgcacctgccaccggaagcacgtcgaggacgggtagatcc 63711
>dbj|AP004702.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0524F03 Length = 167696 Score = 91.7 bits (46), Expect = 2e-15 Identities = 64/70 (91%) Strand = Plus / Plus Query: 305 gtgctgcaggggaagtacgagctggggcgggtgctggggcacggcaacttcggccgggtg 364 ||||||||||||| ||||||| ||||||||||||| || |||||||||||||| |||||| Sbjct: 159749 gtgctgcaggggaggtacgagatggggcgggtgctcggccacggcaacttcgggcgggtg 159808 Query: 365 cacgcggcgc 374 |||| ||||| Sbjct: 159809 cacgtggcgc 159818 Score = 79.8 bits (40), Expect = 6e-12 Identities = 49/52 (94%) Strand = Plus / Plus Query: 152 ctgcgcggcggccgcaattgccaccgcaagcacgtcgaggacgggtagatcc 203 |||||||||||||||| |||||||| ||||||||||||||||||||||||| Sbjct: 159590 ctgcgcggcggccgcacctgccaccggaagcacgtcgaggacgggtagatcc 159641
>gb|AF141378.1|AF141378 Zea mays protein kinase PK4 mRNA, complete cds Length = 2037 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 313 ggggaagtacgagctggggcgggtgctggggcacggcaacttcg 356 ||||||||||||||||||||| | ||||||||||||| ||||| Sbjct: 240 ggggaagtacgagctggggcgcctcctggggcacggcaccttcg 283
>gb|AY109974.1| Zea mays CL1242_1 mRNA sequence Length = 2018 Score = 56.0 bits (28), Expect = 8e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 313 ggggaagtacgagctggggcgggtgctggggcacggcaacttcg 356 ||||||||||||||||||||| | ||||||||||||| ||||| Sbjct: 240 ggggaagtacgagctggggcgcctcctggggcacggcaccttcg 283
>gb|AF145482.1|AF145482 Mesembryanthemum crystallinum putative serine/threonine protein kinase mRNA, complete cds Length = 2443 Score = 54.0 bits (27), Expect = 3e-04 Identities = 39/43 (90%) Strand = Plus / Plus Query: 157 cggcggccgcaattgccaccgcaagcacgtcgaggacgggtag 199 ||||||| | ||||||||||||||||| ||||| ||||||||| Sbjct: 330 cggcggcaggaattgccaccgcaagcatgtcgaagacgggtag 372
>ref|NM_119244.2| Arabidopsis thaliana CIPK6 (CBL-INTERACTING PROTEIN KINASE 6); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein-tyrosi> AT4G30960 (CIPK6) mRNA, complete cds Length = 1958 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 157 cggcggccgcaattgccaccgcaagcacgtcgaggacgggt 197 ||||||| | ||||||||||| || |||||||||||||||| Sbjct: 188 cggcggcaggaattgccaccggaaacacgtcgaggacgggt 228
>gb|AY035046.1| Arabidopsis thaliana putative protein kinase (At4g30960) mRNA, complete cds Length = 1781 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 157 cggcggccgcaattgccaccgcaagcacgtcgaggacgggt 197 ||||||| | ||||||||||| || |||||||||||||||| Sbjct: 188 cggcggcaggaattgccaccggaaacacgtcgaggacgggt 228
>emb|AL161578.2|ATCHRIV74 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 74 Length = 194920 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 157 cggcggccgcaattgccaccgcaagcacgtcgaggacgggt 197 ||||||| | ||||||||||| || |||||||||||||||| Sbjct: 23104 cggcggcaggaattgccaccggaaacacgtcgaggacgggt 23144
>emb|AL022198.1|ATF6I18 Arabidopsis thaliana DNA chromosome 4, BAC clone F6I18 (ESSA project) Length = 122322 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Minus Query: 157 cggcggccgcaattgccaccgcaagcacgtcgaggacgggt 197 ||||||| | ||||||||||| || |||||||||||||||| Sbjct: 54867 cggcggcaggaattgccaccggaaacacgtcgaggacgggt 54827
>gb|AF436831.1|AF436831 Arabidopsis thaliana AT4g30960/F6I18_130 mRNA, complete cds Length = 1821 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 157 cggcggccgcaattgccaccgcaagcacgtcgaggacgggt 197 ||||||| | ||||||||||| || |||||||||||||||| Sbjct: 184 cggcggcaggaattgccaccggaaacacgtcgaggacgggt 224
>gb|AF285106.1|AF285106 Arabidopsis thaliana CBL-interacting protein kinase 6 (CIPK6) mRNA, complete cds Length = 1947 Score = 50.1 bits (25), Expect = 0.005 Identities = 37/41 (90%) Strand = Plus / Plus Query: 157 cggcggccgcaattgccaccgcaagcacgtcgaggacgggt 197 ||||||| | ||||||||||| || |||||||||||||||| Sbjct: 175 cggcggcaggaattgccaccggaaacacgtcgaggacgggt 215
>gb|AF525402.1| Glycine max SOS2-like protein kinase mRNA, complete cds Length = 2084 Score = 46.1 bits (23), Expect = 0.081 Identities = 36/41 (87%) Strand = Plus / Plus Query: 157 cggcggccgcaattgccaccgcaagcacgtcgaggacgggt 197 ||||||| | ||||||||||| ||||||||||| || |||| Sbjct: 208 cggcggcagaaattgccaccggaagcacgtcgaagasgggt 248
>ref|NM_191317.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1563 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 313 ggggaagtacgagctggggcgggtgctggg 342 ||||||||||||||||||||| || ||||| Sbjct: 129 ggggaagtacgagctggggcgcgtcctggg 158
>ref|XM_479261.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1341 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 313 ggggaagtacgagctggggcgggtgctggg 342 ||||||||||||| ||||||||| |||||| Sbjct: 9 ggggaagtacgagatggggcgggcgctggg 38
>ref|XM_506498.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_D11.123 mRNA Length = 1778 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 313 ggggaagtacgagctggggcgggtgctggg 342 ||||||||||||| ||||||||| |||||| Sbjct: 144 ggggaagtacgagatggggcgggcgctggg 173
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 313 ggggaagtacgagctggggcgggtgctggg 342 ||||||||||||| ||||||||| |||||| Sbjct: 26411007 ggggaagtacgagatggggcgggcgctggg 26411036
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 313 ggggaagtacgagctggggcgggtgctggg 342 ||||||||||||||||||||| || ||||| Sbjct: 31941621 ggggaagtacgagctggggcgcgtcctggg 31941592
>dbj|AP003409.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1131G08 Length = 158241 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 313 ggggaagtacgagctggggcgggtgctggg 342 ||||||||||||||||||||| || ||||| Sbjct: 127699 ggggaagtacgagctggggcgcgtcctggg 127670
>dbj|AP003749.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_D11 Length = 109399 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 313 ggggaagtacgagctggggcgggtgctggg 342 ||||||||||||| ||||||||| |||||| Sbjct: 65247 ggggaagtacgagatggggcgggcgctggg 65276
>dbj|AK107137.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-C11, full insert sequence Length = 1777 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 313 ggggaagtacgagctggggcgggtgctggg 342 ||||||||||||| ||||||||| |||||| Sbjct: 144 ggggaagtacgagatggggcgggcgctggg 173
>dbj|AK102618.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099G21, full insert sequence Length = 1998 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 313 ggggaagtacgagctggggcgggtgctggg 342 ||||||||||||||||||||| || ||||| Sbjct: 219 ggggaagtacgagctggggcgcgtcctggg 248
>dbj|AK102097.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033083H24, full insert sequence Length = 2924 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 313 ggggaagtacgagctggggcgggtgctggg 342 ||||||||||||| ||||||||| |||||| Sbjct: 2512 ggggaagtacgagatggggcgggcgctggg 2483
>dbj|AK101442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039E18, full insert sequence Length = 2991 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 313 ggggaagtacgagctggggcgggtgctggg 342 ||||||||||||||||||||| || ||||| Sbjct: 220 ggggaagtacgagctggggcgcgtcctggg 249
>dbj|AB011968.1| Oryza sativa OsPK7 gene, complete cds Length = 5816 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Plus Query: 313 ggggaagtacgagctggggcgggtgctggg 342 ||||||||||||||||||||| || ||||| Sbjct: 2311 ggggaagtacgagctggggcgcgtcctggg 2340
>dbj|AP003256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0460E08 Length = 170021 Score = 44.1 bits (22), Expect = 0.32 Identities = 28/30 (93%) Strand = Plus / Minus Query: 313 ggggaagtacgagctggggcgggtgctggg 342 ||||||||||||||||||||| || ||||| Sbjct: 38348 ggggaagtacgagctggggcgcgtcctggg 38319
>gb|AC138676.9| Mus musculus chromosome 3, clone RP23-381I16, complete sequence Length = 204781 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 agggaggaggggggcagcaa 275 |||||||||||||||||||| Sbjct: 56203 agggaggaggggggcagcaa 56184
>gb|AC121264.8| Mus musculus chromosome 9, clone RP24-233F22, complete sequence Length = 194261 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 258 ggaggaggggggcagcaatggagg 281 |||||||| ||||||||||||||| Sbjct: 141667 ggaggaggcgggcagcaatggagg 141690
>ref|XM_800511.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506205.30) partial mRNA Length = 1176 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 aacgtgctgcaggggaagta 321 |||||||||||||||||||| Sbjct: 288 aacgtgctgcaggggaagta 307
>ref|XM_809406.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053507991.30) partial mRNA Length = 1266 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 302 aacgtgctgcaggggaagta 321 |||||||||||||||||||| Sbjct: 378 aacgtgctgcaggggaagta 397
>gb|AC090607.6| Homo sapiens chromosome 15, clone RP11-762H8, complete sequence Length = 156559 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tctcctctacccctcgctgc 91 |||||||||||||||||||| Sbjct: 76423 tctcctctacccctcgctgc 76442
>gb|AF319169.1|AF319169 Brassica napus CBL-interacting protein kinase (CIPK) mRNA, complete cds Length = 1969 Score = 40.1 bits (20), Expect = 5.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 170 tgccaccgcaagcacgtcgaggacgggt 197 |||||||| || |||||||||||||||| Sbjct: 157 tgccaccggaaacacgtcgaggacgggt 184
>ref|XM_692678.1| PREDICTED: Danio rerio similar to neurexin 2 (LOC569301), mRNA Length = 984 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 269 gcagcaatggaggacgctgc 288 |||||||||||||||||||| Sbjct: 626 gcagcaatggaggacgctgc 645
>gb|AY663373.1|AY663367S07 Gallus gallus NMDA receptor subunit 1 (NR1) gene, exons 18 through 20 and complete cds, alternatively spliced Length = 2710 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 cccctcgctgcctttgggaa 100 |||||||||||||||||||| Sbjct: 2217 cccctcgctgcctttgggaa 2198
>emb|AL929386.11| Zebrafish DNA sequence from clone CH211-69J13, complete sequence Length = 165105 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 269 gcagcaatggaggacgctgc 288 |||||||||||||||||||| Sbjct: 124953 gcagcaatggaggacgctgc 124934
>emb|CR450733.7| Zebrafish DNA sequence from clone DKEYP-86E4 in linkage group 18, complete sequence Length = 208614 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 ggaggacgctgcggagggca 296 |||||||||||||||||||| Sbjct: 14384 ggaggacgctgcggagggca 14365
>gb|AC148095.5| Mus musculus chromosome 3, clone RP23-36C9, complete sequence Length = 194212 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 256 agggaggaggggggcagcaa 275 |||||||||||||||||||| Sbjct: 77989 agggaggaggggggcagcaa 77970
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 248 gcgcacgcagggaggagggg 267 |||||||||||||||||||| Sbjct: 163871 gcgcacgcagggaggagggg 163890 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,105,034 Number of Sequences: 3902068 Number of extensions: 2105034 Number of successful extensions: 41072 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 42 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 40878 Number of HSP's gapped (non-prelim): 194 length of query: 374 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 352 effective length of database: 17,147,199,772 effective search space: 6035814319744 effective search space used: 6035814319744 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
