ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet65b09 |
|---|---|
| Clone Library Name | barley_pub |
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 204 bits (520), Expect = 5e-53 Identities = 96/104 (92%), Positives = 100/104 (96%) Frame = +2 Query: 110 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 289 GK+VKN+ SSAL G+ARV MRKTAAKAKQVSS SPWYG+DRVLYLGPLSGEPPSYLTGEF Sbjct: 15 GKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTGEF 74 Query: 290 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 75 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 118
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 189 bits (480), Expect = 2e-48 Identities = 95/105 (90%), Positives = 98/105 (93%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVKNVASSALFGEARVTMRKTAAKAKQVS-SGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK+V NV SS+ FGEARVTMRKTAAKAK + SGSPWYG DRVLYLGPLSGEPPSYLTGE Sbjct: 15 GKAV-NVPSSS-FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLTGE 72 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 188 bits (478), Expect = 4e-48 Identities = 91/97 (93%), Positives = 92/97 (94%), Gaps = 1/97 (1%) Frame = +2 Query: 134 SSALFGEARVTMRKTAAKAKQV-SSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 310 SSALFGEAR+TMRKTAAK K SSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD Sbjct: 21 SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 80 Query: 311 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL Sbjct: 81 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 187 bits (476), Expect = 7e-48 Identities = 96/105 (91%), Positives = 97/105 (92%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVKNVASSALFGEARVTMRKTAAKAKQV-SSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK+V NV SS LFGEARVTMRKTAAKAK SSGSPWYG DRVLYLGPLSGEPPSYLTGE Sbjct: 15 GKAV-NVPSS-LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLTGE 72 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL Sbjct: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 117
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 185 bits (469), Expect = 4e-47 Identities = 85/97 (87%), Positives = 91/97 (93%) Frame = +2 Query: 131 ASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 310 A++ +FGE R+TMRK+AAK K +SGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD Sbjct: 17 AAAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWD 76 Query: 311 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 TAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL Sbjct: 77 TAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 113
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 184 bits (466), Expect = 1e-46 Identities = 88/105 (83%), Positives = 94/105 (89%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK+VK + +SS + G +VTMRKTA+KAK VSSGSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 183 bits (465), Expect = 1e-46 Identities = 88/105 (83%), Positives = 94/105 (89%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK+VK + +SS + G +VTMRKTA+KAK VSSGSPWYG DRV YLGP SGE PSYLTGE Sbjct: 14 GKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 73 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 74 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 118
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 183 bits (464), Expect = 2e-46 Identities = 88/105 (83%), Positives = 92/105 (87%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK+VK + +SS + G RVTMRKTA KAK SSGSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGE 74 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 182 bits (462), Expect = 3e-46 Identities = 88/105 (83%), Positives = 93/105 (88%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK+VK + +SS + G +VTMRKTA KAK VSSGSPWYG DRV YLGP SGE PSYLTGE Sbjct: 14 GKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGE 73 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 74 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 118 Score = 30.0 bits (66), Expect = 2.3 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 5/103 (4%) Frame = +2 Query: 110 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPL-----SGEPPSY 274 G++V A S +F E + + S + W A +V+ +G + +GEP Sbjct: 127 GEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIW--ACQVVLMGAVEGYRVAGEPLGE 184 Query: 275 LTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403 + +D GL+ DPE FA+ + E+ + R AM G Sbjct: 185 VVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 227
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 181 bits (460), Expect = 5e-46 Identities = 85/104 (81%), Positives = 89/104 (85%) Frame = +2 Query: 110 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 289 GK+V +SS + G + TMRKT KAK VSSGSPWYG DRV YLGP SGE PSYLTGEF Sbjct: 15 GKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74 Query: 290 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 75 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 118
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 181 bits (458), Expect = 8e-46 Identities = 86/105 (81%), Positives = 92/105 (87%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK+VK + +SS + G +VTMRKT KAK +SSGSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGE 74 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 181 bits (458), Expect = 8e-46 Identities = 87/105 (82%), Positives = 91/105 (86%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK VK + +SS + G + TMRKTA KAK VSSGSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 179 bits (455), Expect = 2e-45 Identities = 86/105 (81%), Positives = 93/105 (88%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK+VK + +SS + G +VTMRKTA+KAK VSS SPWYG +RV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLTGE 74 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119 Score = 29.3 bits (64), Expect = 3.9 Identities = 16/51 (31%), Positives = 25/51 (49%) Frame = +2 Query: 251 LSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403 ++GEP + +D GL+ DPE FA+ + E+ + R AM G Sbjct: 178 VAGEPLGEVVDPLYPGGSFDPLGLAEDPEAFAELKVKEIKNGRLAMFSMFG 228
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 179 bits (454), Expect = 2e-45 Identities = 85/105 (80%), Positives = 89/105 (84%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK+VK +S + GE R+TMRKTA K K V S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTGE 74 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 177 bits (449), Expect = 9e-45 Identities = 85/105 (80%), Positives = 90/105 (85%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK+VK + +SS + G + TMRKT KAK VSSGSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 75 FPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 176 bits (446), Expect = 2e-44 Identities = 84/105 (80%), Positives = 89/105 (84%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 G +VK + +SS + G + MRKT KAK VSSGSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 74 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 75 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 176 bits (445), Expect = 3e-44 Identities = 84/105 (80%), Positives = 89/105 (84%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK+VK + +SS + G +VTMRKT KAK SS SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLTGE 74 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FP DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 75 FPSDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 119
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 175 bits (444), Expect = 3e-44 Identities = 80/93 (86%), Positives = 83/93 (89%) Frame = +2 Query: 143 LFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGL 322 +FGE R+TMRKTAAK K SGSPWYGADRVLYLGPLSG PPSYLTGEFPGDYGWDT GL Sbjct: 24 VFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDYGWDTEGL 83 Query: 323 SADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 SADPETFAKNRELEVIHCRWA+ LGCVFPEL Sbjct: 84 SADPETFAKNRELEVIHCRWAIAVGLGCVFPEL 116
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 175 bits (443), Expect = 4e-44 Identities = 80/92 (86%), Positives = 82/92 (89%) Frame = +2 Query: 146 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 325 FGE R+TMRKT K K +SGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLS Sbjct: 23 FGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 82 Query: 326 ADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 ADPETFAKNRELEVIH RWAMLGALGCVFPEL Sbjct: 83 ADPETFAKNRELEVIHSRWAMLGALGCVFPEL 114
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 174 bits (442), Expect = 6e-44 Identities = 82/104 (78%), Positives = 87/104 (83%) Frame = +2 Query: 110 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 289 GK+V +SS + +VTMRKT KAK VSSGSPWYG DRV YLGP SGE PSYLTGEF Sbjct: 15 GKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 74 Query: 290 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 PGDYGWDTAGLSADP TFAKNR+LEVIHCRW MLGALGCVFPEL Sbjct: 75 PGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPEL 118
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 171 bits (434), Expect = 5e-43 Identities = 83/105 (79%), Positives = 89/105 (84%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK+VK + +S +FG RVTMRKT SGSPWYG+DRV YLGP SGEPPSYLTGE Sbjct: 15 GKAVKLSPGASEVFGTGRVTMRKTVKPTGP--SGSPWYGSDRVKYLGPFSGEPPSYLTGE 72 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFA+NRELEVIHCRWAMLGALGCVFPEL Sbjct: 73 FPGDYGWDTAGLSADPETFARNRELEVIHCRWAMLGALGCVFPEL 117
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 171 bits (432), Expect = 8e-43 Identities = 85/105 (80%), Positives = 92/105 (87%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVKNVASSA-LFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK+VKN++SS+ + G+ARV+MRKTAA K GSPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKNLSSSSEVQGDARVSMRKTAATKKV---GSPWYGPDRVKYLGPFSGESPSYLTGE 71 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL Sbjct: 72 FPGDYGWDTAGLSADPETFAKNRELEVIHGRWAMLGALGCVFPEL 116
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 170 bits (431), Expect = 1e-42 Identities = 82/104 (78%), Positives = 85/104 (81%) Frame = +2 Query: 110 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 289 GK +K SS G AR TMRK+A K SSGSPWYG DRV YLGP SGE PSYLTGEF Sbjct: 18 GKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEF 77 Query: 290 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 PGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPEL Sbjct: 78 PGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPEL 121
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 170 bits (431), Expect = 1e-42 Identities = 84/105 (80%), Positives = 90/105 (85%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK+VK + A+S + G RVTMRKT AK K SGSPWYG+DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGESPSYLTGE 73 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEL Sbjct: 74 FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 118
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 169 bits (427), Expect = 3e-42 Identities = 85/104 (81%), Positives = 88/104 (84%) Frame = +2 Query: 110 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 289 GK+VK S+ G RV+MRKT K QVSSGSPWYG DRV YLGP SGEPPSYLTGEF Sbjct: 16 GKAVKLGPSAPEVG--RVSMRKTVTK--QVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEF 71 Query: 290 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 PGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL Sbjct: 72 PGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 115
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 169 bits (427), Expect = 3e-42 Identities = 80/91 (87%), Positives = 83/91 (91%) Frame = +2 Query: 149 GEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 328 G A+ TMRKTA+K+ VSSGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDTAGLSA Sbjct: 19 GNAKFTMRKTASKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSA 76 Query: 329 DPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 DPETFAKNRELEVIH RWAMLGALGCVFPEL Sbjct: 77 DPETFAKNRELEVIHSRWAMLGALGCVFPEL 107
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 168 bits (426), Expect = 4e-42 Identities = 80/96 (83%), Positives = 82/96 (85%), Gaps = 1/96 (1%) Frame = +2 Query: 137 SALFGEARVTMRKTAAKAKQVS-SGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 313 + + GEARVTMRK K S S SPWYG DRVLYLGP SGEPPSYLTGEFPGDYGWDT Sbjct: 31 AGVHGEARVTMRKATTKKLTASASTSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDT 90 Query: 314 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 AGLSADPE FAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 91 AGLSADPENFAKNRELEVIHCRWAMLGALGCVFPEL 126
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 168 bits (426), Expect = 4e-42 Identities = 83/105 (79%), Positives = 89/105 (84%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK+V + A+S + G RVTMRKT AK K SGSPWYG+DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVNLSPAASEVLGSGRVTMRKTVAKPKG-PSGSPWYGSDRVKYLGPFSGESPSYLTGE 73 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFA+NRELEVIH RWAMLGALGCVFPEL Sbjct: 74 FPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 118
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 168 bits (426), Expect = 4e-42 Identities = 81/96 (84%), Positives = 84/96 (87%) Frame = +2 Query: 134 SSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDT 313 S+ G RV+MRKTA+K VSSGSPWYG DRV YLGP SGEPPSYLTGEFPGDYGWDT Sbjct: 4 STPQLGVGRVSMRKTASKT--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDT 61 Query: 314 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 AGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL Sbjct: 62 AGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 97
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 167 bits (424), Expect = 7e-42 Identities = 83/106 (78%), Positives = 86/106 (81%), Gaps = 2/106 (1%) Frame = +2 Query: 110 GKSVKNVA--SSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTG 283 GK V+ A SS G AR TMRK+A K SSGSPWYG DRV YLGP SGE PSYLTG Sbjct: 15 GKPVETSANPSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTG 74 Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 EFPGDYGWDTAGLSADPETF+KNRELEVIH RWAMLGALGCVFPEL Sbjct: 75 EFPGDYGWDTAGLSADPETFSKNRELEVIHSRWAMLGALGCVFPEL 120
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 166 bits (421), Expect = 2e-41 Identities = 81/105 (77%), Positives = 88/105 (83%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 G++VK + ++S + G R+TMRK A AK S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GQAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGE 72 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 166 bits (421), Expect = 2e-41 Identities = 81/105 (77%), Positives = 89/105 (84%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 G++VK + ++ + G RV+MRKT AK V+S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GQAVKLSPSAPEITGNGRVSMRKTVAKP--VASSSPWYGPDRVKYLGPFSGESPSYLTGE 72 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 73 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 117
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 165 bits (418), Expect = 4e-41 Identities = 79/92 (85%), Positives = 81/92 (88%), Gaps = 1/92 (1%) Frame = +2 Query: 149 GEARVTMRK-TAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 325 GEAR+TMRK T K+ S SPWYG DRVLYLGP SGEPPSYLTGEFPGDYGWDTAGLS Sbjct: 39 GEARLTMRKATGKKSVAASIDSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98 Query: 326 ADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 ADPETFAKNRELEVIH RWAMLGALGCVFPEL Sbjct: 99 ADPETFAKNRELEVIHSRWAMLGALGCVFPEL 130
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 164 bits (416), Expect = 6e-41 Identities = 78/92 (84%), Positives = 81/92 (88%), Gaps = 1/92 (1%) Frame = +2 Query: 149 GEARVTMRK-TAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 325 GEAR+TMRK T K+ S SPWYG DRV+YLGP SGEPPSYLTGEFPGDYGWDTAGLS Sbjct: 39 GEARLTMRKATGRKSVAASIDSPWYGPDRVMYLGPFSGEPPSYLTGEFPGDYGWDTAGLS 98 Query: 326 ADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 ADPETFAKNRELEVIH RWAMLGALGCVFPEL Sbjct: 99 ADPETFAKNRELEVIHSRWAMLGALGCVFPEL 130
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 164 bits (416), Expect = 6e-41 Identities = 83/105 (79%), Positives = 86/105 (81%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVKNVASSA-LFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 GK+VK SS+ LFG RV+MRKT K S SPWYG DRV YLGP SGE PSYLTGE Sbjct: 15 GKAVKVAPSSSELFGNGRVSMRKTV---KAPVSDSPWYGPDRVKYLGPFSGEAPSYLTGE 71 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 FPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPEL Sbjct: 72 FPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 116
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 152 bits (384), Expect = 3e-37 Identities = 71/92 (77%), Positives = 76/92 (82%) Frame = +2 Query: 146 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 325 FGE R+TMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGEGRITMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 326 ADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+ Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEI 117
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 151 bits (382), Expect = 5e-37 Identities = 75/103 (72%), Positives = 80/103 (77%) Frame = +2 Query: 113 KSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFP 292 K V ++ GEARV M +KA SGS WYG+DR LYLGP SG PPSYL+GEFP Sbjct: 18 KPVNELSRKVGAGEARVQMMAPKSKAP---SGSIWYGSDRPLYLGPFSGSPPSYLSGEFP 74 Query: 293 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 GDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCV PEL Sbjct: 75 GDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVTPEL 117
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 148 bits (374), Expect = 4e-36 Identities = 70/92 (76%), Positives = 74/92 (80%) Frame = +2 Query: 146 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 325 FG R TMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGGGRATMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 326 ADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+ Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEI 117
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 147 bits (370), Expect = 1e-35 Identities = 70/92 (76%), Positives = 74/92 (80%) Frame = +2 Query: 146 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 325 F RVTMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 2 FEGGRVTMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 57 Query: 326 ADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+ Sbjct: 58 ADPETFARNRELEVIHCRWAMLGALGCVFPEI 89
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 146 bits (368), Expect = 2e-35 Identities = 69/92 (75%), Positives = 73/92 (79%) Frame = +2 Query: 146 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 325 F R TMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FNGGRATMRRTVKSAPQ----SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLS 85 Query: 326 ADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 ADPETFA+NRELEVIHCRWAMLGALGCVFPE+ Sbjct: 86 ADPETFARNRELEVIHCRWAMLGALGCVFPEI 117
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 145 bits (366), Expect = 4e-35 Identities = 67/77 (87%), Positives = 68/77 (88%) Frame = +2 Query: 191 KQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 370 K SS SPW+G D V YLGP SGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI Sbjct: 4 KVASSSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVI 63 Query: 371 HCRWAMLGALGCVFPEL 421 H RWAMLGALGCVFPEL Sbjct: 64 HSRWAMLGALGCVFPEL 80
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 145 bits (365), Expect = 5e-35 Identities = 69/88 (78%), Positives = 73/88 (82%) Frame = +2 Query: 158 RVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 337 RV+MR+T A + S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPE Sbjct: 33 RVSMRRTIKSAPE----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 88 Query: 338 TFAKNRELEVIHCRWAMLGALGCVFPEL 421 TFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 89 TFAKNRELEVIHCRWAMLGALGCVFPEL 116
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 144 bits (364), Expect = 6e-35 Identities = 69/92 (75%), Positives = 74/92 (80%) Frame = +2 Query: 146 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 325 FG+AR TMR+T A + S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLS Sbjct: 30 FGQARFTMRRTVKSAPE----SIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLS 85 Query: 326 ADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 ADPETFA+NRELEVIH RWAMLGALGC FPEL Sbjct: 86 ADPETFARNRELEVIHSRWAMLGALGCTFPEL 117
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 144 bits (364), Expect = 6e-35 Identities = 69/91 (75%), Positives = 73/91 (80%) Frame = +2 Query: 149 GEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSA 328 G RV+MR+T A S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSA Sbjct: 31 GGGRVSMRRTVKSAPT----SIWYGPDRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSA 86 Query: 329 DPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 DPETFAKNRELEVIHCRWAMLGALGCVFPE+ Sbjct: 87 DPETFAKNRELEVIHCRWAMLGALGCVFPEI 117
>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast| precursor (CAB) (LHCP) Length = 266 Score = 144 bits (362), Expect = 1e-34 Identities = 68/90 (75%), Positives = 73/90 (81%) Frame = +2 Query: 152 EARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 331 +AR+TMR+T A + S WYG DR YLGP S PSYLTGEFPGDYGWDTA +SAD Sbjct: 33 QARITMRRTVRSAPE----SIWYGPDRPKYLGPFSEGTPSYLTGEFPGDYGWDTAAVSAD 88 Query: 332 PETFAKNRELEVIHCRWAMLGALGCVFPEL 421 PETFAKNRELEVIHCRWAMLGALGCVFPEL Sbjct: 89 PETFAKNRELEVIHCRWAMLGALGCVFPEL 118
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 142 bits (357), Expect = 4e-34 Identities = 67/90 (74%), Positives = 75/90 (83%) Frame = +2 Query: 152 EARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 331 EARVTMR+T +K+ S + WYGADR +LGP SGE PSYL GEF GDYGWDTAGLS+D Sbjct: 33 EARVTMRRTVSKS--AGSDTIWYGADRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSD 90 Query: 332 PETFAKNRELEVIHCRWAMLGALGCVFPEL 421 PETFA+NRELEVIH RWAMLGALGC+ PEL Sbjct: 91 PETFARNRELEVIHARWAMLGALGCLTPEL 120 Score = 28.9 bits (63), Expect = 5.2 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +2 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403 +PG +D GL+ DP+TFA+ + E+ + R AM G Sbjct: 192 YPGG-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSMFG 229
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 142 bits (357), Expect = 4e-34 Identities = 67/88 (76%), Positives = 72/88 (81%) Frame = +2 Query: 158 RVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 337 R+TMR+T A Q S WYG DR YLGP S + PSYLTGEFPGDYGWDTAGLSADPE Sbjct: 32 RITMRRTVKSAPQ----SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87 Query: 338 TFAKNRELEVIHCRWAMLGALGCVFPEL 421 TFA+NRELEVIH RWAMLGALGCVFPE+ Sbjct: 88 TFARNRELEVIHSRWAMLGALGCVFPEI 115 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +2 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403 +PG +D GL+ DP+TFA+ + E+ + R AM G Sbjct: 187 YPGG-AFDPLGLADDPDTFAELKVKELKNGRLAMFSMFG 224
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 139 bits (351), Expect = 2e-33 Identities = 66/90 (73%), Positives = 72/90 (80%) Frame = +2 Query: 152 EARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 331 + R +MR+T Q S WYGADR +LGP S + PSYLTGEFPGDYGWDTAGLSAD Sbjct: 31 DGRFSMRRTVKAVPQ----SIWYGADRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSAD 86 Query: 332 PETFAKNRELEVIHCRWAMLGALGCVFPEL 421 PETFAKNRELEVIH RWAMLGALGC+FPEL Sbjct: 87 PETFAKNRELEVIHSRWAMLGALGCIFPEL 116
>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 256 Score = 137 bits (346), Expect = 8e-33 Identities = 73/104 (70%), Positives = 78/104 (75%) Frame = +2 Query: 110 GKSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEF 289 G+++K S+ G RV+MRKTA K VSSGSPWYG DRV YLGP SGE PSYLTGEF Sbjct: 15 GQAMKLAPSTPELGVGRVSMRKTAPKT--VSSGSPWYGPDRVKYLGPFSGEAPSYLTGEF 72 Query: 290 PGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 G LSADPETFAKNRELEVIH RWAMLGALGCVFPEL Sbjct: 73 HG--------LSADPETFAKNRELEVIHSRWAMLGALGCVFPEL 108
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 131 bits (329), Expect = 7e-31 Identities = 64/103 (62%), Positives = 69/103 (66%) Frame = +2 Query: 113 KSVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFP 292 K+ + G AR TM S WYG DRV YLGP S + PSYL GEFP Sbjct: 24 KNANPLRDVVAMGSARFTM-----------SNDLWYGPDRVKYLGPFSAQTPSYLNGEFP 72 Query: 293 GDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 GDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+ Sbjct: 73 GDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEV 115 Score = 30.8 bits (68), Expect = 1.4 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = +2 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403 +PG +D GL+ DP TFA+ + E+ + R AM G Sbjct: 188 YPGGQYFDPLGLADDPTTFAELKVKEIKNGRLAMFSMFG 226
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 129 bits (324), Expect = 3e-30 Identities = 60/82 (73%), Positives = 67/82 (81%), Gaps = 1/82 (1%) Frame = +2 Query: 179 AAKAKQVSSGSP-WYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNR 355 AA +++ G+ WYG DRV YLGP S + PSYL GEFPGDYGWDTAGLSADPE FA+NR Sbjct: 37 AATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNR 96 Query: 356 ELEVIHCRWAMLGALGCVFPEL 421 LEVIH RWAMLGALGCVFPE+ Sbjct: 97 ALEVIHGRWAMLGALGCVFPEV 118 Score = 30.4 bits (67), Expect = 1.8 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = +2 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403 +PG +D GL+ DP TFA+ + E+ + R AM G Sbjct: 191 YPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFG 229
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 125 bits (314), Expect = 4e-29 Identities = 69/99 (69%), Positives = 71/99 (71%) Frame = +2 Query: 125 NVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 304 N SS L A TM K AAK+K SS RV YLGP SGE PSYLTGEFPGDYG Sbjct: 27 NPISSTLIVTAGFTMLKHAAKSKVSSSTCD----RRVKYLGPFSGEWPSYLTGEFPGDYG 82 Query: 305 WDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 WDTAGLSA PETFAKNRELEVIH R AM ALGC+FPEL Sbjct: 83 WDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPEL 121
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 124 bits (310), Expect = 1e-28 Identities = 61/90 (67%), Positives = 68/90 (75%) Frame = +2 Query: 152 EARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 331 +A T + AA AK S+G WYG DR +LGP S P+YLTGEFPGDYGWDTAGLSAD Sbjct: 20 KAAGTKQTKAAPAK--SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSAD 77 Query: 332 PETFAKNRELEVIHCRWAMLGALGCVFPEL 421 PETF K RELEVIH RWA+LGALG + PEL Sbjct: 78 PETFKKYRELEVIHARWALLGALGILTPEL 107 Score = 30.4 bits (67), Expect = 1.8 Identities = 15/39 (38%), Positives = 24/39 (61%) Frame = +2 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403 +PG+ +D GL+ DP+TFA+ + E+ + R AM G Sbjct: 180 YPGE-SFDPLGLADDPDTFAELKVKEIKNGRLAMFSCFG 217
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 122 bits (305), Expect = 4e-28 Identities = 55/58 (94%), Positives = 55/58 (94%) Frame = +2 Query: 248 PLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 P SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH WAMLGALGCVFPEL Sbjct: 1 PFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPEL 58
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 120 bits (301), Expect = 1e-27 Identities = 63/96 (65%), Positives = 71/96 (73%), Gaps = 2/96 (2%) Frame = +2 Query: 140 ALFGEARVTMRKTAAKAKQV-SSGSPWYGADRVLYLGPLS-GEPPSYLTGEFPGDYGWDT 313 AL + T +KTAAKA SSG +YG +R +LGP S P+YLTGEFPGDYGWDT Sbjct: 10 ALQVTCKATGKKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDT 69 Query: 314 AGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 AGLSADPETF + RELE+IH RWAMLGALGC PEL Sbjct: 70 AGLSADPETFKRYRELELIHARWAMLGALGCQTPEL 105
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 108 bits (271), Expect = 4e-24 Identities = 49/70 (70%), Positives = 58/70 (82%), Gaps = 1/70 (1%) Frame = +2 Query: 215 WYGADRVLYLGPLS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAML 391 +YG DR +LGP S + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+L Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALL 92 Query: 392 GALGCVFPEL 421 GALG + PEL Sbjct: 93 GALGILTPEL 102 Score = 30.0 bits (66), Expect = 2.3 Identities = 16/39 (41%), Positives = 24/39 (61%) Frame = +2 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403 +PG +D GL+ DP+TFA+ + E+ + R AM LG Sbjct: 177 YPGG-PFDPLGLADDPDTFAELKVKEIKNGRLAMFSCLG 214
>CB2_DUNSA (P20865) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 273 Score = 90.5 bits (223), Expect = 1e-18 Identities = 48/86 (55%), Positives = 56/86 (65%) Frame = +2 Query: 164 TMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETF 343 T + A +K SS + +YG D L + P TGEFPGDYGWDTAGLSADPETF Sbjct: 40 TKKGAKAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETF 98 Query: 344 AKNRELEVIHCRWAMLGALGCVFPEL 421 + RELE+IH R +LGALG V PEL Sbjct: 99 KRYRELELIHARCGLLGALGMVTPEL 124 Score = 32.0 bits (71), Expect = 0.61 Identities = 16/39 (41%), Positives = 25/39 (64%) Frame = +2 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403 +PG+ +D GL+ DP+TFA+ + E+ + R AM LG Sbjct: 198 YPGE-AFDPLGLADDPDTFAELKVKEIKNGRLAMFACLG 235
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 82.4 bits (202), Expect = 4e-16 Identities = 44/96 (45%), Positives = 56/96 (58%), Gaps = 3/96 (3%) Frame = +2 Query: 140 ALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYL--GPLS-GEPPSYLTGEFPGDYGWD 310 ALF + + K+ A ++ + WYG DR ++L G L E P YL GE GDYG+D Sbjct: 37 ALFSKKKPAPAKSKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYD 96 Query: 311 TAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 418 GL PE FAK + E+IH RWAMLGA G + PE Sbjct: 97 PFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPE 132
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 74.7 bits (182), Expect = 8e-14 Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 1/105 (0%) Frame = +2 Query: 110 GKSVKNVASSALFGEA-RVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGE 286 G V +S L G RV+ T A+ ++ DR L+ PP +L G Sbjct: 24 GSIVGTTKASFLGGRRLRVSKYSTTPTARSATTVCVAADPDRPLWFP--GSTPPPWLDGS 81 Query: 287 FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 PGD+G+D GL++DPE+ N++ E++HCRWAMLGA G PEL Sbjct: 82 LPGDFGFDPLGLASDPESLRWNQQAELVHCRWAMLGAAGIFIPEL 126
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 68.2 bits (165), Expect = 8e-12 Identities = 31/53 (58%), Positives = 38/53 (71%) Frame = +2 Query: 263 PPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 PP YLTGE GD G+D AGL+ADP TF + + EV HCR +ML +GC+ PEL Sbjct: 380 PPRYLTGEAYGDKGFDPAGLAADPVTFERMQVAEVFHCRLSMLALVGCLVPEL 432 Score = 65.9 bits (159), Expect = 4e-11 Identities = 29/56 (51%), Positives = 39/56 (69%) Frame = +2 Query: 254 SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 + EPP+ LTGE+P D G+D L+ADP+ +A+ R EV H R AML +GC+ PEL Sbjct: 193 NAEPPALLTGEYPADRGFDPLNLAADPDVYARMRVAEVFHGRLAMLCTVGCIVPEL 248 Score = 58.5 bits (140), Expect = 6e-09 Identities = 27/51 (52%), Positives = 36/51 (70%) Frame = +2 Query: 266 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 418 PS+L GE+ GD G+D AGL+ADP+TF + R EV H R AML +G + P+ Sbjct: 12 PSWLNGEYYGDRGFDPAGLAADPDTFERMRIAEVYHGRLAMLAVVGALVPD 62
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 67.8 bits (164), Expect = 1e-11 Identities = 36/101 (35%), Positives = 49/101 (48%) Frame = +2 Query: 116 SVKNVASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPG 295 S+ ++ G R+ + K A S AD L PP +L G PG Sbjct: 25 SIVGATKASFLGGKRLRVSKFIAPVGSRSVAVSAVAADPDRPLWFPGSTPPEWLDGSLPG 84 Query: 296 DYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 418 D+G+D GL +DPE+ N + E++H RWAMLGA G PE Sbjct: 85 DFGFDPLGLGSDPESLKWNAQAELVHSRWAMLGAAGIFIPE 125
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 63.2 bits (152), Expect = 2e-10 Identities = 28/57 (49%), Positives = 37/57 (64%), Gaps = 1/57 (1%) Frame = +2 Query: 251 LSGEP-PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPE 418 + G+P PSYL G PGD+G+D+ GL P + +E E+IHCRWAML G + PE Sbjct: 50 MPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESELIHCRWAMLAVPGIIVPE 106
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 59.7 bits (143), Expect = 3e-09 Identities = 25/54 (46%), Positives = 37/54 (68%) Frame = +2 Query: 260 EPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 +PP++LTGE+P D G+D ++ADP +A+ R EV H R +ML +G + PEL Sbjct: 167 QPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEVFHARLSMLAIVGSIVPEL 220 Score = 32.0 bits (71), Expect = 0.61 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +2 Query: 332 PETFAKNRELEVIHCRWAMLGALGCVFPEL 421 P + + R EV + R AML +GCV+PEL Sbjct: 1 PTVYERMRVAEVFNGRLAMLAIVGCVYPEL 30
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 55.1 bits (131), Expect = 7e-08 Identities = 36/100 (36%), Positives = 46/100 (46%), Gaps = 6/100 (6%) Frame = +2 Query: 122 KNVASSALFGEARV------TMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTG 283 K + S LF ++V T RK A + W A + G + P +L G Sbjct: 23 KKSSQSLLFVNSKVGAGVSTTSRKLVVVAAAAAPKKSWIPAVK----GGGNFLDPEWLDG 78 Query: 284 EFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403 PGD+G+D GL DP RE E+IH RWAML LG Sbjct: 79 SLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMLAVLG 118
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 53.9 bits (128), Expect = 1e-07 Identities = 24/52 (46%), Positives = 32/52 (61%) Frame = +2 Query: 266 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEL 421 P YLTG GD G+D GL+ DPE + E+++ RWAMLG G + PE+ Sbjct: 64 PDYLTGSLAGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEV 115
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 53.1 bits (126), Expect = 3e-07 Identities = 24/46 (52%), Positives = 27/46 (58%) Frame = +2 Query: 266 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403 P +L G PGDYG+D GL DP RE E+IH RWAM LG Sbjct: 68 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 52.0 bits (123), Expect = 6e-07 Identities = 39/95 (41%), Positives = 45/95 (47%), Gaps = 5/95 (5%) Frame = +2 Query: 134 SSALFGEARVTMRKTAAK-----AKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGD 298 + AL G A VT R T K A V+ W A V G L P +L G PGD Sbjct: 24 TQALLG-AHVTARVTTPKRFVVAAAAVAPKKSWIPA--VKSGGNLVD--PEWLDGSLPGD 78 Query: 299 YGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403 +G+D GL DP RE E+IH RWAM LG Sbjct: 79 FGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLG 113
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 51.2 bits (121), Expect = 1e-06 Identities = 37/90 (41%), Positives = 51/90 (56%), Gaps = 6/90 (6%) Frame = +2 Query: 170 RKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE---T 340 RK + + S+ GA+R L+ S + SYL G PGD+G+D GLS DPE Sbjct: 33 RKASFVVRAASTPPVKQGANRQLWFA--SKQSLSYLDGRLPGDFGFDPLGLS-DPEGTGG 89 Query: 341 FAKNREL---EVIHCRWAMLGALGCVFPEL 421 F + + L EVI+ R+AMLGA G + PE+ Sbjct: 90 FIEPKWLAYGEVINGRFAMLGAAGAIAPEI 119
>CB2F_LYCES (P14277) Chlorophyll a-b binding protein 3B, chloroplast precursor| (LHCII type I CAB-3B) (LHCP) (Fragments) Length = 267 Score = 45.8 bits (107), Expect = 4e-05 Identities = 23/37 (62%), Positives = 28/37 (75%), Gaps = 1/37 (2%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPW 217 GK+VK + +SS + G R+TMRKTAAK K SSGSPW Sbjct: 15 GKAVKLSPSSSEISGNGRITMRKTAAKPKPASSGSPW 51
>CB2E_LYCES (P14276) Chlorophyll a-b binding protein 3A, chloroplast precursor| (LHCII type I CAB-3A) (LHCP) (Fragments) Length = 267 Score = 45.1 bits (105), Expect = 7e-05 Identities = 23/37 (62%), Positives = 27/37 (72%), Gaps = 1/37 (2%) Frame = +2 Query: 110 GKSVKNVASSA-LFGEARVTMRKTAAKAKQVSSGSPW 217 GK+VK SS+ + G R+TMRKTAAK K SSGSPW Sbjct: 15 GKTVKLAPSSSEITGNGRITMRKTAAKPKPASSGSPW 51
>FCP_ISOGA (Q39709) Fucoxanthin-chlorophyll a-c binding protein, chloroplast| precursor (FCP) Length = 208 Score = 37.7 bits (86), Expect = 0.011 Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 2/61 (3%) Frame = +2 Query: 242 LGPLSGEPPSYLT-GEFPGDYGWDTAGLS-ADPETFAKNRELEVIHCRWAMLGALGCVFP 415 + P +G+ S L G PGD G+D GL+ +DP+ F +E E+ H R AM+ A G + Sbjct: 132 VNPETGKADSALREGYEPGDLGFDPLGLAPSDPDEFRLMQEKELSHGRLAMIAAAGFLAQ 191 Query: 416 E 418 E Sbjct: 192 E 192
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 37.7 bits (86), Expect = 0.011 Identities = 36/129 (27%), Positives = 43/129 (33%), Gaps = 44/129 (34%) Frame = +2 Query: 164 TMRKTAAKAKQVSSGSP-WYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE- 337 T + + KAK V S P W+ + P YL G GDYG+D GL E Sbjct: 37 TKKASPKKAKTVISDRPLWFPG----------AKSPEYLDGSLVGDYGFDPFGLGKPAEY 86 Query: 338 ----------TFAKN--------------------------------RELEVIHCRWAML 391 AKN RE E+IH RWAML Sbjct: 87 LQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKSTPFQPYSEVFGLQRFRECELIHGRWAML 146 Query: 392 GALGCVFPE 418 LG + E Sbjct: 147 ATLGAITVE 155 Score = 33.5 bits (75), Expect = 0.21 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +2 Query: 233 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403 VL +G + + + L E +PG +D GL++DP A+ + E+ H R AM+G LG Sbjct: 193 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLG 252
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 36.2 bits (82), Expect = 0.032 Identities = 37/134 (27%), Positives = 49/134 (36%), Gaps = 43/134 (32%) Frame = +2 Query: 146 FGEARVTMRKTAAKAKQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 325 FG+ + +K+A K V++ P + Y G +S P +L G GDYG+D GL Sbjct: 36 FGKKKAAPKKSAKKT--VTTDRPLW------YPGAIS---PDWLDGSLVGDYGFDPFGLG 84 Query: 326 ADPE-----------TFAKN--------------------------------RELEVIHC 376 E AKN RE E+IH Sbjct: 85 KPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAKSTPFQPYSEVFGIQRFRECELIHG 144 Query: 377 RWAMLGALGCVFPE 418 RWAML LG + E Sbjct: 145 RWAMLATLGALSVE 158 Score = 35.4 bits (80), Expect = 0.055 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = +2 Query: 233 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALG 403 VL +G + + + L E +PG +D GL+ADPE A+ + E+ H R AM+ LG Sbjct: 196 VLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLG 255
>HMGA2_HUMAN (P52926) High mobility group protein HMGI-C (High mobility group| AT-hook protein 2) Length = 109 Score = 35.8 bits (81), Expect = 0.042 Identities = 26/76 (34%), Positives = 35/76 (46%), Gaps = 9/76 (11%) Frame = -3 Query: 380 TCSGSPQAPGSLQRSRGQPRARR-------CPNRSRQGTHRSSSSGAPRKA--DRGRAHG 228 + G P AP +R RG+PR ++ P R R G + S + +P KA + A G Sbjct: 14 SAQGQPAAPAPQKRGRGRPRKQQQEPTGEPSPKRPR-GRPKGSKNKSPSKAAQKKAEATG 72 Query: 227 RHRTMGCPMKLAWPLQ 180 R G P K WP Q Sbjct: 73 EKRPRGRPRK--WPQQ 86
>YGY3_HALSQ (P21561) Hypothetical 50.6 kDa protein in the 5'region of gyrA and| gyrB (ORF 3) Length = 437 Score = 35.8 bits (81), Expect = 0.042 Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 14/78 (17%) Frame = -3 Query: 410 RRIRAHRAWPTCSGSPQAPG---SLQRSRGQPRARRCPNRSRQGTH--------RSSSSG 264 RR+ HR +G +APG L++ PR R +R + G H + +G Sbjct: 108 RRVGGHRGRNRHAGDRRAPGVDSRLRQQHQHPRGRHASDRVQDGAHPRRQRLREQPRHAG 167 Query: 263 APRKAD---RGRAHGRHR 219 PR+ RGR+ G HR Sbjct: 168 RPRRRQPPRRGRSRGTHR 185 Score = 33.1 bits (74), Expect = 0.27 Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = -3 Query: 341 RSRGQPRARRCPNRSR-QGTHRSSSSGAPRKADRG 240 R G+PR R+ P R R +GTHR APR A RG Sbjct: 164 RHAGRPRRRQPPRRGRSRGTHRRHLRQAPRPAVRG 198
>LC7L2_MOUSE (Q7TNC4) Putative RNA-binding protein Luc7-like 2 (CGI-74 homolog)| Length = 392 Score = 35.8 bits (81), Expect = 0.042 Identities = 21/63 (33%), Positives = 28/63 (44%) Frame = -3 Query: 410 RRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAH 231 RR R+H P S S + RS + R RR ++SR+ HR S + R R Sbjct: 259 RRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQR 318 Query: 230 GRH 222 RH Sbjct: 319 SRH 321
>LC7L2_HUMAN (Q9Y383) Putative RNA-binding protein Luc7-like 2| Length = 392 Score = 35.8 bits (81), Expect = 0.042 Identities = 21/63 (33%), Positives = 28/63 (44%) Frame = -3 Query: 410 RRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAH 231 RR R+H P S S + RS + R RR ++SR+ HR S + R R Sbjct: 259 RRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQR 318 Query: 230 GRH 222 RH Sbjct: 319 SRH 321
>HMGA2_MOUSE (P52927) High mobility group protein HMGI-C (High mobility group| AT-hook protein 2) Length = 108 Score = 34.7 bits (78), Expect = 0.094 Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 9/76 (11%) Frame = -3 Query: 380 TCSGSPQAPGSLQRSRGQPRARR-------CPNRSRQGTHRSSSSGAPRKADRGRAH--G 228 + G P AP +R RG+PR ++ P R R G + S + +P KA + +A G Sbjct: 14 SAQGQPAAPVPQKRGRGRPRKQQQEPTCEPSPKRPR-GRPKGSKNKSPSKAAQKKAETIG 72 Query: 227 RHRTMGCPMKLAWPLQ 180 R G P K WP Q Sbjct: 73 EKRPRGRPRK--WPQQ 86
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 34.3 bits (77), Expect = 0.12 Identities = 28/95 (29%), Positives = 32/95 (33%), Gaps = 43/95 (45%) Frame = +2 Query: 263 PPSYLTGEFPGDYGWDTAGLSADPE-----------TFAKN------------------- 352 PP +L G GD G+D GL E AKN Sbjct: 65 PPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIKPTP 124 Query: 353 -------------RELEVIHCRWAMLGALGCVFPE 418 RE E+IH RWAMLG LG + E Sbjct: 125 FQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVE 159 Score = 30.8 bits (68), Expect = 1.4 Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Frame = +2 Query: 233 VLYLGPLSGEPPSYLTGE---FPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGAL 400 VL +G + + S L E +PG Y +D GL+ADPE + E+ H R AM+ L Sbjct: 197 VLVVGYIEFQRNSELDPEKRIYPGGY-FDPLGLAADPEKLDTLKLAEIKHSRLAMVAFL 254
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 34.3 bits (77), Expect = 0.12 Identities = 36/131 (27%), Positives = 42/131 (32%), Gaps = 49/131 (37%) Frame = +2 Query: 173 KTAAKAKQVSSGSPWYGADRVLYLGPLSGEP----PSYLTGEFPGDYGWDTAGLSADPE- 337 K K S+G+ G Y G P P +L G PGD G+D GLS E Sbjct: 24 KATTKKVATSTGTRSGGVGYRKYQGDALWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEF 83 Query: 338 ----------TFAKN----------------------------------RELEVIHCRWA 385 AKN RE E+IH RWA Sbjct: 84 VVIGVDENDQNAAKNNKGSVEAIVQATPDEVSSENRLAPYSEVFGLARFRECELIHGRWA 143 Query: 386 MLGALGCVFPE 418 ML LG + E Sbjct: 144 MLACLGALVAE 154
>TRSF_DROSI (Q24669) Female-specific protein transformer| Length = 184 Score = 33.5 bits (75), Expect = 0.21 Identities = 16/39 (41%), Positives = 20/39 (51%) Frame = -3 Query: 335 RGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 219 R Q R R R+ Q T R+ S + +DRG H RHR Sbjct: 52 REQDRIRSLRQRAHQSTRRTRSRSRSQSSDRGSRHRRHR 90
>ATU_DROME (Q94546) Another transcription unit protein| Length = 725 Score = 33.1 bits (74), Expect = 0.27 Identities = 24/49 (48%), Positives = 28/49 (57%), Gaps = 3/49 (6%) Frame = -3 Query: 359 APGSLQRSRGQPRARRCPNRSRQGTHRS---SSSGAPRKADRGRAHGRH 222 APGS QRSR R+ +RSR G+ S S SG+PR A G A RH Sbjct: 30 APGS-QRSR---RSGSGSDRSRSGSRSSRSRSGSGSPRSARSGSAESRH 74
>GLNA_MACFA (Q4R7U3) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 33.1 bits (74), Expect = 0.27 Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%) Frame = +2 Query: 149 GEARVTMRKTAAKAKQ-VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLS 325 G A +R T + VS+ PW+G ++ L G P + + FPG G G+ Sbjct: 107 GPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVG 166 Query: 326 ADPETFAKNRELEVIHCR 379 AD A R++ H R Sbjct: 167 ADR---AYGRDIVEAHYR 181
>SYNJ2_RAT (O55207) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1496 Score = 32.3 bits (72), Expect = 0.47 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 6/69 (8%) Frame = -2 Query: 399 SAPSMAHLQWITSSSRFFAKVSGSAESPAVSQP*SPGNSPVK*LGG----SPES-GPR*S 235 SAP+ HLQ + S+S+ ++ S+ SP+ +P +P P LG SPE+ GPR + Sbjct: 1347 SAPAAFHLQVLQSNSQLLQGLTCSSSSPSPPKPDTPLLYPQMALGTSSAISPETDGPRVT 1406 Query: 234 -TRSAPYHG 211 +A +HG Sbjct: 1407 EPEAASFHG 1415
>RSRC1_RAT (Q5PPJ2) Arginine/serine-rich coiled coil protein 1| Length = 334 Score = 32.0 bits (71), Expect = 0.61 Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 14/82 (17%) Frame = -3 Query: 419 ARGRRIRAHRAWPTCSGSPQA-----------PGSLQRSRG---QPRARRCPNRSRQGTH 282 +R +R + HR + S S + P S RS QPR+ R R+ + Sbjct: 12 SRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRRPRSESRSWSRDRQPRSHSYERRRRRRSS 71 Query: 281 RSSSSGAPRKADRGRAHGRHRT 216 SSS G+ RK R R+ GR ++ Sbjct: 72 SSSSYGSRRKRSRSRSRGRGKS 93
>GLNA_RAT (P09606) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 32.0 bits (71), Expect = 0.61 Identities = 20/61 (32%), Positives = 28/61 (45%) Frame = +2 Query: 197 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 376 VSS PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSSQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 377 R 379 R Sbjct: 180 R 180
>GLNA_XENLA (P51121) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) Length = 392 Score = 32.0 bits (71), Expect = 0.61 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Frame = +2 Query: 155 ARVTMRKTAAKAKQ-VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 331 A +R T K + V+ PW+G ++ L ++G P + FPG G G+ AD Sbjct: 109 AETNLRHTCKKIMEMVNDHRPWFGMEQEYTLLGINGHPYGWPENGFPGPQGPYYCGVGAD 168
>RSRC1_HUMAN (Q96IZ7) Arginine/serine-rich coiled coil protein 1| Length = 334 Score = 31.6 bits (70), Expect = 0.80 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 14/82 (17%) Frame = -3 Query: 419 ARGRRIRAHRAWPTCSGSPQAP-------GSLQRSRG-------QPRARRCPNRSRQGTH 282 +R +R + HR + S S + G RS+ QPR+ R R + Sbjct: 12 SRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRHRSS 71 Query: 281 RSSSSGAPRKADRGRAHGRHRT 216 SSS G+ RK R R+ GR ++ Sbjct: 72 SSSSYGSRRKRSRSRSRGRGKS 93 Score = 30.4 bits (67), Expect = 1.8 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 12/78 (15%) Frame = -3 Query: 407 RIRAHRAWPTCSGSPQAPGSLQRSRGQ------------PRARRCPNRSRQGTHRSSSSG 264 R R HR+ + S + S RSRG+ R RR +R R +H SS Sbjct: 64 RRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSER 123 Query: 263 APRKADRGRAHGRHRTMG 210 + + R R+ R R G Sbjct: 124 SSHRRTRSRSRDRERRKG 141 Score = 29.3 bits (64), Expect = 3.9 Identities = 20/66 (30%), Positives = 30/66 (45%) Frame = -3 Query: 416 RGRRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGR 237 RG+ R R+ ++ +RSR +PR R S + +HR + S R DR R Sbjct: 90 RGKSYRVQRS--------RSKSRTRRSRSRPRLRSHSRSSERSSHRRTRS---RSRDRER 138 Query: 236 AHGRHR 219 GR + Sbjct: 139 RKGRDK 144
>GLNA_PIG (P46410) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.6 bits (70), Expect = 0.80 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +2 Query: 155 ARVTMRKTAAKAKQ-VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 331 A +R T + VS+ PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 332 PETFAKNRELEVIHCR 379 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.6 bits (70), Expect = 0.80 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +2 Query: 155 ARVTMRKTAAKAKQ-VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 331 A +R T + VS+ PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLLGTDGHPFGWPSDGFPGPQGLYYCGVGAD 167 Query: 332 PETFAKNRELEVIHCR 379 A R++ H R Sbjct: 168 K---AYRRDIMEAHYR 180
>GLNA_CANFA (Q8HZM5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.6 bits (70), Expect = 0.80 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +2 Query: 155 ARVTMRKTAAKAKQ-VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 331 A +R T + VS+ PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 332 PETFAKNRELEVIHCR 379 A R++ H R Sbjct: 168 K---AYGRDIVEAHYR 180
>LAD1_MOUSE (P57016) Ladinin 1 (Lad-1) (Linear IgA disease autoantigen)| Length = 528 Score = 31.2 bits (69), Expect = 1.0 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -3 Query: 374 SGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADR 243 S PQ G Q + +PR R P++S + S+ P KA R Sbjct: 303 SEQPQTTGGSQATTREPRGRALPDKSPPSSAEQSTPAPPTKASR 346
>CS029_HUMAN (Q8WUQ7) Protein C19orf29 (NY-REN-24 antigen)| Length = 690 Score = 31.2 bits (69), Expect = 1.0 Identities = 18/51 (35%), Positives = 27/51 (52%) Frame = -3 Query: 386 WPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRA 234 W + GS Q+ ++SRGQ RR RS + +SSS +P ++ RA Sbjct: 11 WHSRDGSSQSDSGEEQSRGQWARRRRRARSWSPSSSASSSASPGRSQSPRA 61
>GLNA_HUMAN (P15104) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 31.2 bits (69), Expect = 1.0 Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 1/76 (1%) Frame = +2 Query: 155 ARVTMRKTAAKAKQ-VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 331 A +R T + VS+ PW+G ++ L G P + + FPG G G+ AD Sbjct: 108 AETNLRHTCKRIMDMVSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGAD 167 Query: 332 PETFAKNRELEVIHCR 379 A R++ H R Sbjct: 168 R---AYGRDIVEAHYR 180
>GLNA_HEBCY (Q96UV5) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 31.2 bits (69), Expect = 1.0 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +2 Query: 158 RVTMRKTAAKA-KQVSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 304 R R AAK +Q PW+G ++ L G P + G FPG G Sbjct: 105 RTNFRHHAAKVMEQAKEDVPWFGLEQEYTLFDADGSPYGWPKGGFPGPQG 154
>BTBDC_HUMAN (Q8IY92) BTB/POZ domain-containing protein 12| Length = 1151 Score = 30.8 bits (68), Expect = 1.4 Identities = 19/55 (34%), Positives = 26/55 (47%) Frame = -3 Query: 383 PTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 219 P+ +P +PG+ S G+ + R P+R G H SS AP RAH R Sbjct: 638 PSSCLTPVSPGT---SDGRRQGHRSPSRPHPGGHPHSSPLAPHPISGDRAHFSRR 689
>GLNA_MOUSE (P15105) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.8 bits (68), Expect = 1.4 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = +2 Query: 197 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 376 VS+ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 377 R 379 R Sbjct: 180 R 180
>GLNA_ACOCA (Q9QY94) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 372 Score = 30.8 bits (68), Expect = 1.4 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = +2 Query: 197 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 376 VS+ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 123 VSNQHPWFGMEQEYTLMGTDGHPFGWPSNGFPGPQGPYYCGVGADK---AYGRDIVEAHY 179 Query: 377 R 379 R Sbjct: 180 R 180
>ARNT_MOUSE (P53762) Aryl hydrocarbon receptor nuclear translocator (ARNT| protein) (Dioxin receptor, nuclear translocator) (Hypoxia-inducible factor 1 beta) (HIF-1 beta) Length = 791 Score = 30.4 bits (67), Expect = 1.8 Identities = 19/56 (33%), Positives = 29/56 (51%) Frame = +3 Query: 135 PQLSLVRPASLCGRPLQRPSKFHRAAHGTVPTVCSTSVRFPGSPRAT*PVSSLATT 302 P +++V+P+S G+ L + S+ A G+ PT STS PG P + A T Sbjct: 609 PPVTIVQPSSSAGQILAQISRHSNPAQGSAPTWTSTS--RPGFAAQQVPTQATAKT 662
>PININ_MOUSE (O35691) Pinin| Length = 725 Score = 30.4 bits (67), Expect = 1.8 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = -3 Query: 374 SGSPQAPGSLQ-RSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 219 SGS + GS RS + + SR + +SSS R RGR H R R Sbjct: 600 SGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDR 652
>RNF39_RAT (Q920M2) RING finger protein 39 (LTP-induced RING finger protein)| Length = 352 Score = 30.4 bits (67), Expect = 1.8 Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 12/69 (17%) Frame = -3 Query: 377 CSGSPQAPGSLQRSRGQP-RARRCPNRSRQGTHRSS-----SSGAPRK-ADRGRAHGRHR 219 C GSP APGS + + P + CP RS + R + S G K A+ G GR R Sbjct: 47 CWGSPAAPGSEEATPSCPCCGQPCPRRSLRSNVRLAVEVRISRGLREKLAEPGARTGRRR 106 Query: 218 -----TMGC 207 TMGC Sbjct: 107 GGRIPTMGC 115
>PININ_PONPY (Q5R5X0) Pinin| Length = 719 Score = 30.4 bits (67), Expect = 1.8 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = -3 Query: 374 SGSPQAPGSLQ-RSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 219 SGS + GS RS + + SR + +SSS R RGR H R R Sbjct: 594 SGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDR 646
>PININ_HUMAN (Q9H307) Pinin (140 kDa nuclear and cell adhesion-related| phosphoprotein) (Domain-rich serine protein) (DRS-protein) (DRSP) (Melanoma metastasis clone A protein) (Desmosome-associated protein) (SR-like protein) (Nuclear protein SDK3) Length = 717 Score = 30.4 bits (67), Expect = 1.8 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 1/53 (1%) Frame = -3 Query: 374 SGSPQAPGSLQ-RSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 219 SGS + GS RS + + SR + +SSS R RGR H R R Sbjct: 592 SGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDR 644
>TRA2_DROVI (O02008) Transformer-2 sex-determining protein| Length = 272 Score = 30.4 bits (67), Expect = 1.8 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 9/74 (12%) Frame = -3 Query: 413 GRRIR--------AHRAWP-TCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGA 261 GRRIR AH P G P P +RSR + + R +RSR+ SSS + Sbjct: 173 GRRIRVDYSITQRAHTPTPGVYMGRPSRPLG-RRSRERDYSTRDTSRSRRRHRDESSSVS 231 Query: 260 PRKADRGRAHGRHR 219 P ++R + RHR Sbjct: 232 PYDSNRRKYRSRHR 245
>U2AFM_HUMAN (Q15696) U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa| subunit related-protein 2 (U2(RNU2) small nuclear RNA auxillary factor 1-like 2) (NY-REN-20 antigen) Length = 482 Score = 30.4 bits (67), Expect = 1.8 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 1/50 (2%) Frame = -3 Query: 350 SLQRSRGQPRARRCPNRSRQGTH-RSSSSGAPRKADRGRAHGRHRTMGCP 204 S RSRG+ R +RSR+ RS SS R R R+ R RT+ P Sbjct: 430 SRDRSRGRGSRSRSRSRSRRSRRSRSQSSSRSRSRGRRRSGNRDRTVQSP 479
>VE2_BPV4 (P08345) Regulatory protein E2| Length = 334 Score = 30.0 bits (66), Expect = 2.3 Identities = 21/72 (29%), Positives = 30/72 (41%) Frame = -3 Query: 419 ARGRRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRG 240 ARGR + R+ G Q S RSR + R+ R P + + R + +P + G Sbjct: 146 ARGRSRPSPRSSRDARGRQQRAQSSSRSRSRSRS-RSPTKGPHSSGRDTRLPSPGRPPGG 204 Query: 239 RAHGRHRTMGCP 204 R G CP Sbjct: 205 RRRGTPERERCP 216
>CB2C_LYCES (P14275) Chlorophyll a-b binding protein 1C, chloroplast precursor| (LHCII type I CAB-1C) (LHCP) (Fragments) Length = 265 Score = 30.0 bits (66), Expect = 2.3 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 1/37 (2%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPW 217 G++VK + ++S + G R+TMRK A AK S SPW Sbjct: 15 GQAVKLSPSASEISGNGRITMRK--AVAKSAPSSSPW 49
>VE2_HPV38 (Q80910) Regulatory protein E2| Length = 441 Score = 30.0 bits (66), Expect = 2.3 Identities = 17/48 (35%), Positives = 25/48 (52%) Frame = -3 Query: 371 GSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHG 228 G + G+ +R + + R+R NR + T RSSS G+ RGR G Sbjct: 254 GQRETTGTQRRRKSRSRSRST-NRGGRDTRRSSSRGSSVSPTRGRRRG 300
>DAG1_RABIT (Q28685) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 30.0 bits (66), Expect = 2.3 Identities = 24/78 (30%), Positives = 29/78 (37%), Gaps = 4/78 (5%) Frame = +3 Query: 189 PSKFHRAAHGTVPTVCSTSVRFPGSPRAT*PVSSLATTVGTPPGSRLTPRPLQRTGS--- 359 P A T PT + R AT S ATT P TPRP+ R + Sbjct: 408 PGYVEPTAVATPPTTTTKKPRVSTPKPATPSTDSSATTTRRPTKKPRTPRPVPRVTTKAP 467 Query: 360 -LR*STAGGPCSVRSDAS 410 R TA P +R+ S Sbjct: 468 ITRLETASPPTRIRTTTS 485
>GLNA1_DROME (P20477) Glutamine synthetase 1, mitochondrial precursor (EC| 6.3.1.2) (Glutamate--ammonia ligase 1) Length = 399 Score = 30.0 bits (66), Expect = 2.3 Identities = 18/69 (26%), Positives = 28/69 (40%) Frame = +2 Query: 197 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 376 +S PW+G ++ L + G P + FP G G+ AD E V+ C Sbjct: 161 ISDQEPWFGIEQEYTLLDVDGRPFGWPENGFPAPQGPYYCGVGADRVYARDLVEAHVVAC 220 Query: 377 RWAMLGALG 403 +A + G Sbjct: 221 LYAGIDFAG 229
>TIMD2_RAT (Q5FVR0) T-cell immunoglobulin and mucin domain-containing protein| 2 precursor (TIMD-2) (T-cell membrane protein 2) (TIM-2) Length = 349 Score = 30.0 bits (66), Expect = 2.3 Identities = 17/60 (28%), Positives = 25/60 (41%) Frame = -3 Query: 365 PQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRTMGCPMKLAWP 186 P +P + + G+P R N R T R +++G P +R GR T P P Sbjct: 129 PTSPPTRPTNTGRPTTTRPTNTGRPTTTRPTNTGRPTTTERPTTTGRPTTTERPTTTGRP 188
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.0 bits (66), Expect = 2.3 Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 2/94 (2%) Frame = +3 Query: 144 SLVRPASLCGRPLQRPSKFHRAAHGTVPTVCSTSVRFPGSPRAT*PVSSLATTVGTPPGS 323 S P+S G P P H + T PTV S+ SP + +L +T TP + Sbjct: 3678 STATPSSTQGPPAGTP---HVSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTAT 3734 Query: 324 RLTPRPLQRTGS--LR*STAGGPCSVRSDASSPS 419 T P G+ R S P + S A+ S Sbjct: 3735 SFTAIPSSSLGTTWTRLSQTTTPMATMSTATPSS 3768 Score = 29.3 bits (64), Expect = 3.9 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 2/69 (2%) Frame = +3 Query: 219 TVPTVCSTSVRFPGSPRAT*PVSSLATTVGTPPGSRLTPRPLQRTGS--LR*STAGGPCS 392 T PTV S+ SP + +L +T TP + +TP P G+ R S P + Sbjct: 2473 TTPTVTSSKATPSSSPGTATALPALRSTATTPTATSVTPIPSSSLGTTWTRLSQTTTPTA 2532 Query: 393 VRSDASSPS 419 S A+ S Sbjct: 2533 TMSTATPSS 2541
>FSH_DROME (P13709) Homeotic protein female sterile (Fragile-chorion membrane| protein) Length = 2038 Score = 29.6 bits (65), Expect = 3.0 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%) Frame = +3 Query: 219 TVPTVCSTSVRFPGSPRAT*PVSSLATTVGTPPGS----RLTPRPLQRTGSLR*STAGGP 386 T +V ++S + G AT ++T GT PGS + RP+ G STAGG Sbjct: 194 TKVSVAASSAQQSGLQGATGAGGGSSSTPGTQPGSGAGGAIAARPVSAMGGTVSSTAGGA 253 Query: 387 CSVRSDASSP 416 S+ ++ P Sbjct: 254 PSIPPISTMP 263
>RECF_HAHCH (Q2SQZ4) DNA replication and repair protein recF| Length = 375 Score = 29.6 bits (65), Expect = 3.0 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = -1 Query: 418 LGEDASERTEHGPPAVDHLKLPVLCKGLGVSREPGGVPTV-VARELTGQVAR 266 LG AS RT+ AV HL ++C G V+ + G + V+R+ TG++ R Sbjct: 46 LGRGASFRTKELDYAVSHLSDEMVCFGEAVNEDAGKSFRIGVSRQKTGKLTR 97
>PRGR_CANFA (Q9GLW0) Progesterone receptor (PR)| Length = 939 Score = 29.6 bits (65), Expect = 3.0 Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 7/79 (8%) Frame = -3 Query: 401 RAHRAW----PTCSGSPQAPGSLQRSRGQPRARRCPNRSR---QGTHRSSSSGAPRKADR 243 R+ AW P C P+ P + +R A CP SR + ++GA + R Sbjct: 139 RSSPAWEPRSPRCPSGPEPPEDPRGARSSQGAA-CPLMSRPEGKAGDGCGTAGAHKGPPR 197 Query: 242 GRAHGRHRTMGCPMKLAWP 186 G + R CP AWP Sbjct: 198 GLSPSRQPLPLCPGAHAWP 216
>GLNA_CHICK (P16580) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 373 Score = 29.6 bits (65), Expect = 3.0 Identities = 19/61 (31%), Positives = 28/61 (45%) Frame = +2 Query: 197 VSSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHC 376 VS+ PW+G ++ L G P + + FPG G G+ AD A R++ H Sbjct: 124 VSNQHPWFGMEQEYTLLGTDGHPFGWPSNCFPGPQGPYYCGVGADK---AYGRDIVEAHY 180 Query: 377 R 379 R Sbjct: 181 R 181
>SWAP_CAEEL (Q10580) Protein SWAP (Suppressor of white apricot protein homolog)| Length = 749 Score = 29.6 bits (65), Expect = 3.0 Identities = 14/42 (33%), Positives = 19/42 (45%) Frame = -3 Query: 344 QRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 219 +RSR + R+R C R R H+ S R R+ R R Sbjct: 695 KRSRSRRRSRSCSPRDRSREHKKSRKSGRHHRSRSRSSSRDR 736
>PININ_BOVIN (P79122) Pinin| Length = 703 Score = 29.6 bits (65), Expect = 3.0 Identities = 16/52 (30%), Positives = 22/52 (42%) Frame = -3 Query: 374 SGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 219 SGS + GS + + SR + ++SS R RGR H R R Sbjct: 605 SGSSSSSGSSSSRTSSSSSSTSGSSSRDSSSSTTSSSESRSRSRGRGHNRDR 656
>VE2_HPV09 (P36780) Regulatory protein E2| Length = 461 Score = 29.6 bits (65), Expect = 3.0 Identities = 16/42 (38%), Positives = 20/42 (47%) Frame = -3 Query: 341 RSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRT 216 RS+G+ R R R+G S+ S P RGR GR T Sbjct: 280 RSKGRTETERGGERRRRGRSSSADSTTPTDRRRGRGGGRGPT 321
>DMWD_HUMAN (Q09019) Dystrophia myotonica WD repeat-containing protein| (Dystrophia myotonica-containing WD repeat motif protein) (DMR-N9 protein) (Protein 59) (Fragment) Length = 553 Score = 29.3 bits (64), Expect = 3.9 Identities = 19/54 (35%), Positives = 25/54 (46%) Frame = +3 Query: 255 PGSPRAT*PVSSLATTVGTPPGSRLTPRPLQRTGSLR*STAGGPCSVRSDASSP 416 PG+P T P +S ++ G PG PR L R+ SL GG A+ P Sbjct: 342 PGTPGTTPPAAS--SSRGGEPGPGPLPRSLSRSNSLPHPAGGGKAGGPGVAAEP 393
>ULK2_HUMAN (Q8IYT8) Serine/threonine-protein kinase ULK2 (EC 2.7.11.1)| (Unc-51-like kinase 2) Length = 1036 Score = 29.3 bits (64), Expect = 3.9 Identities = 15/29 (51%), Positives = 18/29 (62%) Frame = -2 Query: 336 SGSAESPAVSQP*SPGNSPVK*LGGSPES 250 +G + SP S+P S G SP K LG SP S Sbjct: 557 AGYSYSPQPSRPGSLGTSPTKHLGSSPRS 585
>SFRS6_HUMAN (Q13247) Splicing factor, arginine/serine-rich 6 (Pre-mRNA-splicing| factor SRP55) Length = 344 Score = 29.3 bits (64), Expect = 3.9 Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 1/68 (1%) Frame = -3 Query: 416 RGRRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRG- 240 R R R+ R+ + S S S RSR + R+R +RS+ RS S P K+DRG Sbjct: 202 RRSRSRSRRSSRSRSRSISKSRSRSRSRSKGRSR---SRSKGRKSRSKSKSKP-KSDRGS 257 Query: 239 RAHGRHRT 216 +H R R+ Sbjct: 258 HSHSRSRS 265
>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 28.9 bits (63), Expect = 5.2 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = -3 Query: 344 QRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRTMG 210 +RSR + R RR +RSR RSSS G K R+ + +T G Sbjct: 83 RRSRSRDR-RRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDG 126
>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (PRP5 homolog) Length = 1032 Score = 28.9 bits (63), Expect = 5.2 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = -3 Query: 344 QRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRTMG 210 +RSR + R RR +RSR RSSS G K R+ + +T G Sbjct: 83 RRSRSRDR-RRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDG 126
>YW91_CAEEL (Q22712) Hypothetical protein T24A11.1 in chromosome III| Length = 938 Score = 28.9 bits (63), Expect = 5.2 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = -2 Query: 207 PDETCLAFAAVFRIVTRASPKRAEEATFFTDLPAK-AEERDMVVVAIALLRLEVCRVFS 34 P E F FRIV K EEA F P + E+ D+ + A L L++ R+F+ Sbjct: 108 PIEGGSLFVTNFRIVVILKDKEVEEALRFLVFPLQDIEQIDLAIPAFIHLSLKIGRMFT 166
>DAG1_HUMAN (Q14118) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 895 Score = 28.9 bits (63), Expect = 5.2 Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 4/78 (5%) Frame = +3 Query: 189 PSKFHRAAHGTVPTVCSTSVRFPGSPRAT*PVSSLATTVGTPPGSRLTPRPLQRTGS--- 359 P A T PT + R AT S TT P TPRP+ R + Sbjct: 408 PGYVEPTAVATPPTTTTKKPRVSTPKPATPSTDSTTTTTRRPTKKPRTPRPVPRVTTKVS 467 Query: 360 -LR*STAGGPCSVRSDAS 410 R TA P +R+ S Sbjct: 468 ITRLETASPPTRIRTTTS 485
>ASCL2_MOUSE (O35885) Achaete-scute homolog 2 (Mash-2)| Length = 263 Score = 28.9 bits (63), Expect = 5.2 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 2/54 (3%) Frame = -3 Query: 392 RAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGA--PRKADRGR 237 R PT SG A + +R + P RC R R G +SSS A R+ +R R Sbjct: 76 RLMPTSSGVAGACAA-RRRQASPELLRCSRRRRSGATEASSSSAAVARRNERER 128
>SFRS7_HUMAN (Q16629) Splicing factor, arginine/serine-rich 7 (Splicing factor| 9G8) Length = 238 Score = 28.9 bits (63), Expect = 5.2 Identities = 15/40 (37%), Positives = 21/40 (52%) Frame = -3 Query: 368 SPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKA 249 SP S RS +PR+ R +RS S SG+PR++ Sbjct: 192 SPSRSRSRSRSISRPRSSRSKSRSPSPKRSRSPSGSPRRS 231
>NLTP4_ARATH (Q9LLR6) Nonspecific lipid-transfer protein 4 precursor (LTP 4)| Length = 112 Score = 28.9 bits (63), Expect = 5.2 Identities = 14/44 (31%), Positives = 23/44 (52%) Frame = -3 Query: 383 PTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRK 252 P C+G + G Q + + +A RC + +G + S +SG P K Sbjct: 50 PCCAGVKKLNGMAQTTPDRQQACRCLQSAAKGVNPSLASGLPGK 93
>HORN_HUMAN (Q86YZ3) Hornerin| Length = 2850 Score = 28.9 bits (63), Expect = 5.2 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%) Frame = -3 Query: 374 SGSPQAPGSLQRSRGQPRARRCPNRSR--QGTHRSSSSG 264 SGS Q+PG QR G +R+ P+ R G+ RSSSSG Sbjct: 2530 SGSGQSPGHGQRGSG---SRQSPSYGRHGSGSGRSSSSG 2565 Score = 28.9 bits (63), Expect = 5.2 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%) Frame = -3 Query: 374 SGSPQAPGSLQRSRGQPRARRCPNRSR--QGTHRSSSSG 264 SGS Q+PG QR G +R+ P+ R G+ RSSSSG Sbjct: 2060 SGSGQSPGHGQRGSG---SRQSPSYGRHGSGSGRSSSSG 2095 Score = 28.9 bits (63), Expect = 5.2 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%) Frame = -3 Query: 374 SGSPQAPGSLQRSRGQPRARRCPNRSR--QGTHRSSSSG 264 SGS Q+PG QR G +R+ P+ R G+ RSSSSG Sbjct: 1590 SGSGQSPGHGQRGSG---SRQSPSYGRHGSGSGRSSSSG 1625 Score = 28.9 bits (63), Expect = 5.2 Identities = 19/39 (48%), Positives = 24/39 (61%), Gaps = 2/39 (5%) Frame = -3 Query: 374 SGSPQAPGSLQRSRGQPRARRCPNRSR--QGTHRSSSSG 264 SGS Q+PG QR G +R+ P+ R G+ RSSSSG Sbjct: 1120 SGSGQSPGHGQRGSG---SRQSPSYGRHGSGSGRSSSSG 1155
>TAF1_DROME (P51123) Transcription initiation factor TFIID subunit 1 (EC| 2.7.11.1) (Transcription initiation factor TFIID 230 kDa subunit) (TAFII-230) (TAFII250) (TBP-associated factor 230 kDa) (p230) Length = 2129 Score = 28.9 bits (63), Expect = 5.2 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%) Frame = -3 Query: 398 AHRAWPTCSGSPQAPGSLQRSRGQPRARRCP-NRSRQGTHRSSSSGAPRK 252 +H A +P PG ++R RG+PR +R P + G PRK Sbjct: 1772 SHTAPAVRKPAPPGPGEVKRGRGRPRKQRDPVEEVKSQNPVKRGRGRPRK 1821
>PRM2_HUMAN (P04554) Protamine-2 (Protamine-P2) (Sperm histone P2) [Contains:| Basic nuclear protein HPI1; Basic nuclear protein HPI2; Basic nuclear protein HPS1; Basic nuclear protein HPS2; Sperm histone HP4 (Sperm protamine P4); Sperm histone HP2 (Sperm Length = 102 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 2/56 (3%) Frame = -3 Query: 368 SPQAPGSLQRSRGQP--RARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRTMGC 207 SP+ +R+ GQ R R C R HR R+ R H R GC Sbjct: 37 SPEHVEVYERTHGQSHYRRRHCSRRRLHRIHRRQHRSCRRRKRRSCRHRRRHRRGC 92
>VE2_HPV49 (P36795) Regulatory protein E2| Length = 488 Score = 28.5 bits (62), Expect = 6.7 Identities = 19/60 (31%), Positives = 27/60 (45%) Frame = -3 Query: 407 RIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHG 228 R R R + S S +A S RSR R +R G+ +S +P++ RGR G Sbjct: 286 RTRTRRREASTSRSQKASRSRSRSRSTSRG----SRGSGGSVTTSRDSSPKRTRRGRGRG 341
>L181_CHLEU (Q03965) Chlorophyll a-b binding protein L1818, chloroplast| precursor Length = 270 Score = 28.5 bits (62), Expect = 6.7 Identities = 32/90 (35%), Positives = 39/90 (43%), Gaps = 4/90 (4%) Frame = +2 Query: 161 VTMRKTAAKAKQVSSGSPWYG--ADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADP 334 V+ KT + K V S S A+ YL L G +G F G WD L+A Sbjct: 28 VSGSKTVSGGKTVGSASAESRRVAEVQAYLATLPG--CGVESGPFKGV--WDPLSLAATA 83 Query: 335 ET--FAKNRELEVIHCRWAMLGALGCVFPE 418 + RE E+ H R AML ALG V E Sbjct: 84 TVGDVRRWRESEITHGRVAMLAALGFVVGE 113
>VE2_HPV17 (P36785) Regulatory protein E2| Length = 452 Score = 28.5 bits (62), Expect = 6.7 Identities = 18/69 (26%), Positives = 28/69 (40%) Frame = -3 Query: 410 RRIRAHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAH 231 RR R + PT + + ++RSR R R+ +R + R R + R Sbjct: 242 RRYRRKASSPTATTTRHKRQDIRRSRSTSRGRQAISRGGERRQRRRERSYSRDSSRSPNR 301 Query: 230 GRHRTMGCP 204 GR + G P Sbjct: 302 GRGGSSGGP 310
>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) Length = 1032 Score = 28.5 bits (62), Expect = 6.7 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = -3 Query: 344 QRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRTMG 210 +RSR + R RR +RSR RSSS G+ K R+ + + G Sbjct: 83 RRSRSRDR-RRSRSRSRGRRSRSSSPGSKTKKTENRSRSKEKAEG 126
>DAG1_CANFA (Q9TSZ6) Dystroglycan precursor (Dystrophin-associated glycoprotein| 1) [Contains: Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-DG)] Length = 892 Score = 28.5 bits (62), Expect = 6.7 Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 4/78 (5%) Frame = +3 Query: 189 PSKFHRAAHGTVPTVCSTSVRFPGSPRAT*PVSSLATTVGTPPGSRLTPRPLQRTGS--- 359 P A T PT + R AT S TT P TPRP+ R + Sbjct: 405 PGYVEPTAVATPPTTTTKKPRVSTPKPATPSTDSSTTTTRRPTKKPRTPRPVPRVTTKAP 464 Query: 360 -LR*STAGGPCSVRSDAS 410 R TA P +R+ S Sbjct: 465 ITRLETASPPTRIRTTTS 482
>HR38_DROME (P49869) Probable nuclear hormone receptor HR38 (dHR38)| Length = 1073 Score = 28.5 bits (62), Expect = 6.7 Identities = 16/34 (47%), Positives = 19/34 (55%) Frame = +3 Query: 285 SSLATTVGTPPGSRLTPRPLQRTGSLR*STAGGP 386 ++ A TVG PP R P+QRT S STA P Sbjct: 661 AAAAATVGGPPPVRRASLPVQRTVSPAGSTAQSP 694
>GLNA_AMAMU (Q8X169) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 354 Score = 28.5 bits (62), Expect = 6.7 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%) Frame = +2 Query: 158 RVTMRKTAAKAKQVSSGS-PWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 304 R R AK +++ PW+G ++ L G P + G FPG G Sbjct: 105 RTNHRHHTAKVMELAKDEIPWFGIEQEYTLFDADGSPYGWPKGGFPGPQG 154
>SFRS2_CHICK (P30352) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 221 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = -3 Query: 344 QRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRT 216 +RSR R RR +RSR + S S R R R R R+ Sbjct: 117 RRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRS 159
>GLN11_ORYSA (P14656) Glutamine synthetase cytosolic isozyme 1-1 (EC 6.3.1.2)| (OsGLN1;1) (OsGS1;1) (Glutamate--ammonia ligase GLN1;1) (Glutamine synthetase shoot isozyme) Length = 356 Score = 28.1 bits (61), Expect = 8.8 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 4/58 (6%) Frame = +2 Query: 170 RKTAAK---AKQVSSGSPWYGADR-VLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSAD 331 R AAK + +V+S PWYG ++ L P + G FPG G G+ AD Sbjct: 107 RHNAAKIFSSPEVASEEPWYGIEQEYTLLQKDINWPLGWPVGGFPGPQGPYYCGIGAD 164
>EBNA1_EBV (P03211) Epstein-Barr nuclear antigen 1 (EBV nuclear antigen 1)| (EBNA-1) Length = 641 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%) Frame = -3 Query: 353 GSLQRSRGQPRARRCPNRSRQGTHRSSSSGA-PRKADRGR 237 GS +R+RG+ R R R R + +SSSSG+ PR+ GR Sbjct: 364 GSRERARGRGRGRG-EKRPRSPSSQSSSSGSPPRRPPPGR 402
>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)| (DEAD box protein 46) (Helicase of 117.4 kDa) Length = 1032 Score = 28.1 bits (61), Expect = 8.8 Identities = 17/45 (37%), Positives = 24/45 (53%) Frame = -3 Query: 344 QRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRTMG 210 +RSR + R RR +RSR RSSS G+ K R+ + + G Sbjct: 83 RRSRSRDR-RRSRSRSRGRRSRSSSPGSKSKKAENRSRSKEKAEG 126
>CB2A_LYCES (P14274) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type I CAB-1A) (LHCP) (Fragments) Length = 265 Score = 28.1 bits (61), Expect = 8.8 Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%) Frame = +2 Query: 110 GKSVK-NVASSALFGEARVTMRKTAAKAKQVSSGSPW 217 G++VK + ++S G R+TMRK A AK S SPW Sbjct: 15 GQAVKLSPSASENSGNGRITMRK--AVAKSAPSSSPW 49
>TRA2B_RAT (P62997) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (RA301) Length = 288 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/61 (29%), Positives = 26/61 (42%) Frame = -3 Query: 398 AHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 219 AH + + +P S + SR R + SR + RSS R R R+H R R Sbjct: 23 AHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSR 82 Query: 218 T 216 + Sbjct: 83 S 83
>TRA2B_MOUSE (P62996) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) (Silica-induced gene 41 protein) (SIG-41) Length = 288 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/61 (29%), Positives = 26/61 (42%) Frame = -3 Query: 398 AHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 219 AH + + +P S + SR R + SR + RSS R R R+H R R Sbjct: 23 AHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSR 82 Query: 218 T 216 + Sbjct: 83 S 83
>TRA2B_HUMAN (P62995) Arginine/serine-rich splicing factor 10| (Transformer-2-beta) (HTRA2-beta) (Transformer 2 protein homolog) Length = 288 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/61 (29%), Positives = 26/61 (42%) Frame = -3 Query: 398 AHRAWPTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHR 219 AH + + +P S + SR R + SR + RSS R R R+H R R Sbjct: 23 AHGSGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSR 82 Query: 218 T 216 + Sbjct: 83 S 83
>SFRS2_RAT (Q6PDU1) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = -3 Query: 344 QRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRT 216 +RSR R RR +RSR + S S R R R R R+ Sbjct: 116 RRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRS 158
>SFRS2_PANTR (Q5R1W5) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) Length = 220 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = -3 Query: 344 QRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRT 216 +RSR R RR +RSR + S S R R R R R+ Sbjct: 116 RRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRS 158
>SFRS2_MOUSE (Q62093) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) (Putative myelin regulatory factor 1) (MRF-1) Length = 220 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = -3 Query: 344 QRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRT 216 +RSR R RR +RSR + S S R R R R R+ Sbjct: 116 RRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRS 158
>SFRS2_HUMAN (Q01130) Splicing factor, arginine/serine-rich 2 (Splicing factor| SC35) (SC-35) (Splicing component, 35 kDa) (PR264 protein) Length = 220 Score = 28.1 bits (61), Expect = 8.8 Identities = 16/43 (37%), Positives = 20/43 (46%) Frame = -3 Query: 344 QRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRT 216 +RSR R RR +RSR + S S R R R R R+ Sbjct: 116 RRSRSPRRRRRSRSRSRSRSRSRSRSRYSRSKSRSRTRSRSRS 158
>GLNA_TUBBO (Q86ZU6) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia| ligase) (GS) Length = 358 Score = 28.1 bits (61), Expect = 8.8 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = +2 Query: 212 PWYGADRVLYLGPLSGEPPSYLTGEFPGDYG 304 PW+G ++ L L G P + G FPG G Sbjct: 128 PWFGLEQEYTLFDLYGNPYGWPKGGFPGPQG 158
>S2A4R_HUMAN (Q9NR83) SLC2A4 regulator (GLUT4 enhancer factor) (GEF) (Huntington| disease gene regulatory region-binding protein 1) (HDBP-1) Length = 387 Score = 28.1 bits (61), Expect = 8.8 Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 9/79 (11%) Frame = +2 Query: 131 ASSALFGEARVTMRKTAAKAKQVSSGSPWYGADRVLY-----LGP----LSGEPPSYLTG 283 A A G+AR+ AA +S+ GA + L P L P SY + Sbjct: 92 AQRATPGKARLDEVMAAAALTSLSTSPLLLGAPVAAFSPEPGLEPWKEALVRPPGSYSSS 151 Query: 284 EFPGDYGWDTAGLSADPET 340 GD+GWD A + P T Sbjct: 152 SNSGDWGWDLASDQSSPST 170
>YG41_SCHPO (O60176) Hypothetical RNA-binding protein C23E6.01c in chromosome| II Length = 473 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/51 (27%), Positives = 22/51 (43%) Frame = +3 Query: 267 RAT*PVSSLATTVGTPPGSRLTPRPLQRTGSLR*STAGGPCSVRSDASSPS 419 + T P +SL + PP ++ +P P L T G P + SP+ Sbjct: 392 QTTIPATSLFPAMSLPPQAQFSPYPAVAPSPLALQTRGAPIGMEISIGSPA 442
>GUN1_RALSO (P58599) Endoglucanase precursor (EC 3.2.1.4)| (Endo-1,4-beta-glucanase) (Cellulase) Length = 424 Score = 28.1 bits (61), Expect = 8.8 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 5/75 (6%) Frame = +2 Query: 182 AKAKQVSSGSP---WYGADRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKN 352 AK QV+ G+ W G V G GE G PG YG + SAD T+ KN Sbjct: 103 AKVCQVAQGTGTLLWRG---VSLAGAEFGE------GSLPGTYGSNYIYPSADSATYYKN 153 Query: 353 RELEVIHC--RWAML 391 + + ++ RW L Sbjct: 154 KGMNLVRLPFRWERL 168
>CWC22_YARLI (Q6C8C5) Pre-mRNA-splicing factor CWC22| Length = 954 Score = 28.1 bits (61), Expect = 8.8 Identities = 17/46 (36%), Positives = 25/46 (54%) Frame = -3 Query: 362 QAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGR 225 ++PGS R R +PR+R +RSR R + PR R R++ R Sbjct: 816 RSPGSRSRPRSRPRSR---SRSR-SLSRDRTGSPPRGRRRSRSYSR 857
>VE2_BPV3 (Q8BDD6) Regulatory protein E2| Length = 414 Score = 28.1 bits (61), Expect = 8.8 Identities = 18/50 (36%), Positives = 23/50 (46%) Frame = -3 Query: 383 PTCSGSPQAPGSLQRSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRA 234 P S P P R RG P+ R P RS+SSG+ + RGR+ Sbjct: 198 PVTSSLPPGPN---RRRG-PQTRGHPRHKSASFRRSASSGSDTRDSRGRS 243
>J1L_HCMVA (P17143) Hypothetical protein J1L| Length = 309 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%) Frame = -3 Query: 326 PRARRCPNRSRQGTHRSSSSGAPRKADRGRAHGRHRTMG-CPMKLAW 189 PR RR P RS+ RS+ + R +R + +HR C ++ W Sbjct: 50 PRHRRRPERSKTPDKRSAETTQARTVERTGSAPKHRPEARCRQQIPW 96
>HSP70_TRYCR (P05456) Heat shock 70 kDa protein| Length = 680 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/56 (26%), Positives = 29/56 (51%), Gaps = 3/56 (5%) Frame = -1 Query: 412 EDASERTEHGPPAVDHLKLPVLC---KGLGVSREPGGVPTVVARELTGQVARGLPG 254 E + E EH +++L P++ +G+ + PGG+P + + G + G+PG Sbjct: 589 EASKEEYEHRQKELENLCTPIMTNMYQGMAGAGMPGGMPGGMPGGMPGGMPGGMPG 644
>ENGC_STRCO (Q9ZBT9) Probable GTPase engC (EC 3.6.1.-)| Length = 366 Score = 28.1 bits (61), Expect = 8.8 Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 9/67 (13%) Frame = -1 Query: 367 HLKLPVLCKGLGVSREPGGVPTVVARELTGQVA--RGLPGKRTE-------VEHTVGTVP 215 H L V+C G V+ EPGG P V L + A R KR+E V+H V V Sbjct: 66 HDPLRVVCTGDWVAVEPGGNPRYVRTYLPRRTAFVRSTSSKRSEGQILAANVDHAVVAVS 125 Query: 214 WAAR*NL 194 A +L Sbjct: 126 LAVELDL 132
>SHAN1_HUMAN (Q9Y566) SH3 and multiple ankyrin repeat domains protein 1 (Shank1)| (Somatostatin receptor-interacting protein) (SSTR-interacting protein) (SSTRIP) Length = 2161 Score = 28.1 bits (61), Expect = 8.8 Identities = 15/38 (39%), Positives = 18/38 (47%) Frame = -3 Query: 341 RSRGQPRARRCPNRSRQGTHRSSSSGAPRKADRGRAHG 228 R+R R R + RQ R SSSG PR+ G G Sbjct: 496 RARSPSRGRHPEDAKRQPRGRPSSSGTPREGPAGGTGG 533 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,716,043 Number of Sequences: 219361 Number of extensions: 1439355 Number of successful extensions: 5715 Number of sequences better than 10.0: 161 Number of HSP's better than 10.0 without gapping: 5243 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5668 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2286875994 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
