ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet65b02 |
|---|---|
| Clone Library Name | barley_pub |
>CHL1_ARATH (Q05085) Nitrate/chlorate transporter| Length = 590 Score = 65.1 bits (157), Expect = 8e-11 Identities = 38/120 (31%), Positives = 59/120 (49%) Frame = +1 Query: 73 GEPLPRHDGRGGWRAALFIVAVGFLERIGFTGVGGNLITYLTGPLGMSTXXXXXGVNAWS 252 G P R GGW +A I+ + +ER+ G+G NL+TYLTG + + V + Sbjct: 20 GRPADRSK-TGGWASAAMILCIEAVERLTTLGIGVNLVTYLTGTMHLGNATAANTVTNFL 78 Query: 253 GTXXXXXXXXXXXXDSRLGRYRAVLIAGVLYLLSLGMLTVSSMLQTSHLRPAGCHNTTST 432 GT D+ LGRY + I + + +LT+S+++ LRP C+ TTS+ Sbjct: 79 GTSFMLCLLGGFIADTFLGRYLTIAIFAAIQATGVSILTLSTII--PGLRPPRCNPTTSS 136
>PTR2_ARATH (P46032) Peptide transporter PTR2 (Histidine-transporting protein)| Length = 585 Score = 64.3 bits (155), Expect = 1e-10 Identities = 36/115 (31%), Positives = 52/115 (45%) Frame = +1 Query: 70 SGEPLPRHDGRGGWRAALFIVAVGFLERIGFTGVGGNLITYLTGPLGMSTXXXXXGVNAW 249 +G P P + G W+A FI+ ER+ + G+ GNLITYLT L V W Sbjct: 33 NGNP-PLKEKTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVSAATNVTTW 91 Query: 250 SGTXXXXXXXXXXXXDSRLGRYRAVLIAGVLYLLSLGMLTVSSMLQTSHLRPAGC 414 GT D+ GRY + +Y + + LT+S+ + L+PA C Sbjct: 92 QGTCYLTPLIGAVLADAYWGRYWTIACFSGIYFIGMSALTLSASVPA--LKPAEC 144
>OPT1_DROME (P91679) Oligopeptide transporter 1 (Protein YIN)| Length = 743 Score = 37.7 bits (86), Expect = 0.014 Identities = 23/88 (26%), Positives = 40/88 (45%) Frame = +1 Query: 112 RAALFIVAVGFLERIGFTGVGGNLITYLTGPLGMSTXXXXXGVNAWSGTXXXXXXXXXXX 291 ++ FI++ F ER + G+ L+ YLT LG + + ++ Sbjct: 34 KSVAFIISNEFCERFNYYGMRTILVLYLTNKLGYNEETATVLFHTFTMLVYIFPLIGALI 93 Query: 292 XDSRLGRYRAVLIAGVLYLLSLGMLTVS 375 D LG+Y+ +L ++Y SLG + VS Sbjct: 94 ADGWLGKYKTILYLSLVY--SLGAMVVS 119
>S15A1_RAT (P51574) Oligopeptide transporter, small intestine isoform (Peptide| transporter 1) (Intestinal H(+)/peptide cotransporter) (Solute carrier family 15 member 1) (Proton-coupled dipeptide cotransporter) Length = 710 Score = 33.9 bits (76), Expect = 0.20 Identities = 19/86 (22%), Positives = 36/86 (41%) Frame = +1 Query: 124 FIVAVGFLERIGFTGVGGNLITYLTGPLGMSTXXXXXGVNAWSGTXXXXXXXXXXXXDSR 303 FIV F ER + G+ L+ Y LG + + DS Sbjct: 18 FIVVNEFCERFSYYGMRALLVLYFRNFLGWDDDLSTAIYHTFVALCYLTPILGALIADSW 77 Query: 304 LGRYRAVLIAGVLYLLSLGMLTVSSM 381 LG+++ ++ ++Y + +++VSS+ Sbjct: 78 LGKFKTIVSLSIVYTIGQAVISVSSI 103
>YJDL_ECOLI (P39276) Inner membrane transporter yjdL| Length = 485 Score = 33.9 bits (76), Expect = 0.20 Identities = 27/83 (32%), Positives = 36/83 (43%) Frame = +1 Query: 112 RAALFIVAVGFLERIGFTGVGGNLITYLTGPLGMSTXXXXXGVNAWSGTXXXXXXXXXXX 291 RA +IVA+ E F G+ LI YLT LG +A++ Sbjct: 8 RAIYYIVAIQIWEYFSFYGMRALLILYLTHQLGFDDNHAISLFSAYASLVYVTPILGGWL 67 Query: 292 XDSRLGRYRAVLIAGVLYLLSLG 360 D LG R +IAG L L++LG Sbjct: 68 ADRLLGN-RTAVIAGAL-LMTLG 88
>S15A1_MOUSE (Q9JIP7) Oligopeptide transporter, small intestine isoform (Peptide| transporter 1) (Intestinal H(+)/peptide cotransporter) (Solute carrier family 15 member 1) (Proton-coupled dipeptide cotransporter) Length = 709 Score = 33.9 bits (76), Expect = 0.20 Identities = 19/86 (22%), Positives = 36/86 (41%) Frame = +1 Query: 124 FIVAVGFLERIGFTGVGGNLITYLTGPLGMSTXXXXXGVNAWSGTXXXXXXXXXXXXDSR 303 FIV F ER + G+ L+ Y LG + + DS Sbjct: 18 FIVVNEFCERFSYYGMRALLVLYFRNFLGWDDNLSTAIYHTFVALCYLTPILGALIADSW 77 Query: 304 LGRYRAVLIAGVLYLLSLGMLTVSSM 381 LG+++ ++ ++Y + +++VSS+ Sbjct: 78 LGKFKTIVSLSIVYTIGQAVISVSSI 103
>S15A2_HUMAN (Q16348) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 32.3 bits (72), Expect = 0.57 Identities = 26/104 (25%), Positives = 42/104 (40%), Gaps = 5/104 (4%) Frame = +1 Query: 76 EPLPRHDGRGGWRAALFIVAVGFLERIGFTGVGGNLITYLTGPLGMSTXXXXXGVNAWSG 255 +P P G + FIV F ER + G+ LI Y L + +A+S Sbjct: 32 KPSPTICGSNYPLSIAFIVVNEFCERFSYYGMKAVLILYFLYFLHWNEDTSTSIYHAFSS 91 Query: 256 TXXXXXXXXXXXXDSRLGRYRAVLIAGVLYLL-----SLGMLTV 372 DS LG+++ ++ ++Y+L SLG L + Sbjct: 92 LCYFTPILGAAIADSWLGKFKTIIYLSLVYVLGHVIKSLGALPI 135
>S15A1_HUMAN (P46059) Oligopeptide transporter, small intestine isoform (Peptide| transporter 1) (Intestinal H(+)/peptide cotransporter) (Solute carrier family 15 member 1) Length = 708 Score = 32.3 bits (72), Expect = 0.57 Identities = 19/86 (22%), Positives = 35/86 (40%) Frame = +1 Query: 124 FIVAVGFLERIGFTGVGGNLITYLTGPLGMSTXXXXXGVNAWSGTXXXXXXXXXXXXDSR 303 FIV F ER + G+ LI Y T + + + DS Sbjct: 18 FIVVNEFCERFSYYGMRAILILYFTNFISWDDNLSTAIYHTFVALCYLTPILGALIADSW 77 Query: 304 LGRYRAVLIAGVLYLLSLGMLTVSSM 381 LG+++ ++ ++Y + + +VSS+ Sbjct: 78 LGKFKTIVSLSIVYTIGQAVTSVSSI 103
>S15A1_CANFA (Q8WMX5) Oligopeptide transporter, small intestine isoform (Peptide| transporter 1) (Intestinal H(+)/peptide cotransporter) (Solute carrier family 15 member 1) Length = 708 Score = 31.2 bits (69), Expect = 1.3 Identities = 19/86 (22%), Positives = 34/86 (39%) Frame = +1 Query: 124 FIVAVGFLERIGFTGVGGNLITYLTGPLGMSTXXXXXGVNAWSGTXXXXXXXXXXXXDSR 303 FIV F ER + G+ LI Y +G + + DS Sbjct: 18 FIVVNEFCERFSYYGMRALLILYFRRFIGWDDNLSTAIYHTFVALCYLTPILGALIADSW 77 Query: 304 LGRYRAVLIAGVLYLLSLGMLTVSSM 381 LG+++ ++ ++Y + + VSS+ Sbjct: 78 LGKFKTIVSLSIVYTIGQAVTAVSSI 103
>PTR2_SCHPO (Q9P380) Probable peptide transporter ptr2 (Peptide permease ptr2)| Length = 618 Score = 30.4 bits (67), Expect = 2.2 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 8/108 (7%) Frame = +1 Query: 82 LPRHDGRGGWRAALFIVAVGFLERIGFTGVGGNLITYLT-GPLGMSTXXXXXGVNAWSGT 258 LPR G W+A + I+ V ER + G+ Y+ GP + G + G Sbjct: 74 LPRVCGTIPWKAFIIII-VELCERFAYYGLTVPFQNYMQFGPKDATPGALNLGESGADGL 132 Query: 259 XXXXXX-------XXXXXXDSRLGRYRAVLIAGVLYLLSLGMLTVSSM 381 D LGRY ++ + V+Y + + +LT +++ Sbjct: 133 SNFFTFWCYVTPVGAALIADQFLGRYNTIVCSAVIYFIGILILTCTAI 180
>S15A2_RAT (Q63424) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 30.0 bits (66), Expect = 2.8 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 7/96 (7%) Frame = +1 Query: 124 FIVAVGFLERIGFTGVGGNLITYLTGPLGMSTXXXXXGVNAWSGTXXXXXXXXXXXXDSR 303 FIV F ER + G+ L Y L + +A+S DS Sbjct: 48 FIVVNEFCERFSYYGMKAVLTLYFLYFLHWNEDTSTSVYHAFSSLCYFTPILGAAIADSW 107 Query: 304 LGRYRAVLIAGVLYLL-----SLGMLTV--SSMLQT 390 LG+++ ++ ++Y+L SLG + + ML T Sbjct: 108 LGKFKTIIYLSLVYVLGHVFKSLGAIPILGGKMLHT 143
>S15A2_MOUSE (Q9ES07) Oligopeptide transporter, kidney isoform (Peptide| transporter 2) (Kidney H(+)/peptide cotransporter) (Solute carrier family 15 member 2) Length = 729 Score = 30.0 bits (66), Expect = 2.8 Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 7/96 (7%) Frame = +1 Query: 124 FIVAVGFLERIGFTGVGGNLITYLTGPLGMSTXXXXXGVNAWSGTXXXXXXXXXXXXDSR 303 FIV F ER + G+ L Y L + +A+S DS Sbjct: 48 FIVVNEFCERFSYYGMKAVLTLYFLYFLHWNEDTSTSVYHAFSSLCYFTPILGAAIADSW 107 Query: 304 LGRYRAVLIAGVLYLL-----SLGMLTV--SSMLQT 390 LG+++ ++ ++Y+L SLG + + ML T Sbjct: 108 LGKFKTIIYLSLVYVLGHVFKSLGAIPILGGKMLHT 143
>NORM_CHRVO (Q7NXN3) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 465 Score = 28.5 bits (62), Expect = 8.2 Identities = 15/39 (38%), Positives = 19/39 (48%) Frame = +1 Query: 91 HDGRGGWRAALFIVAVGFLERIGFTGVGGNLITYLTGPL 207 H G G +RAA FI VG L + G L+ L P+ Sbjct: 311 HAGAGDYRAARFISGVGMLMGLAMAGGAMALVLLLREPI 349
>IF3A_MOUSE (P23116) Eukaryotic translation initiation factor 3 subunit 10| (eIF-3 theta) (eIF3 p167) (eIF3 p180) (eIF3 p185) (eIF3a) (p162 protein) (Centrosomin) Length = 1344 Score = 28.5 bits (62), Expect = 8.2 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = -1 Query: 189 RDQVAPHAGEPDALQEADGDDEER 118 RD PH + D L+ GDDEER Sbjct: 923 RDDERPHRRDEDRLRRLGGDDEER 946 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,570,075 Number of Sequences: 219361 Number of extensions: 648518 Number of successful extensions: 2266 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 2205 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2265 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
