ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet65a07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M24425.1|BLYACPI Barley acyl carrier protein I (ACP I) mRNA, ... 710 0.0
2gb|M58753.1|BLYACL1 Hordeum vulgare acyl carrier protein I (Acl1... 347 2e-92
3dbj|AK120370.1| Oryza sativa (japonica cultivar-group) cDNA clon... 80 6e-12
4dbj|AK060472.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 2e-08
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 66 9e-08
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 66 9e-08
7emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb... 66 9e-08
8emb|AL713937.3|CNS07YPI Oryza sativa chromosome 12, . BAC OJ1103... 66 9e-08
9gb|AY110717.1| Zea mays CL8824_1 mRNA sequence 62 1e-06
10gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 42 1.4
11emb|CR628337.1| Legionella pneumophila str. Lens complete genome 42 1.4
12emb|CR628336.1| Legionella pneumophila str. Paris complete genome 42 1.4
13gb|AY623761.1| Rattus norvegicus defensin alpha 9 (Defa9) gene, ... 42 1.4
14gb|AC154503.3| Mus musculus BAC clone RP24-89J21 from chromosome... 42 1.4
15gb|AC154725.3| Mus musculus BAC clone RP23-125L8 from chromosome... 42 1.4
16dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
17dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
18dbj|AK060244.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
19dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
20gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 5.4
21ref|NM_052843.2| Homo sapiens obscurin, cytoskeletal calmodulin ... 40 5.4
22gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome... 40 5.4
23gb|AC160533.6| Mus musculus chromosome 5, clone RP24-242L17, com... 40 5.4
24emb|CT010574.8| Mouse DNA sequence from clone RP23-269E16 on chr... 40 5.4
25emb|CR388163.10| Zebrafish DNA sequence from clone CH211-247L8 i... 40 5.4
26emb|AL353593.33| Human DNA sequence from clone RP5-1139B12 on ch... 40 5.4
27emb|AL353150.25| Human DNA sequence from clone RP11-82L18 on chr... 40 5.4
28emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete ... 40 5.4
29emb|AJ002535.1|HSAJ2535 Homo sapiens mRNA for obscurin (OBSCN gene) 40 5.4
30gb|AC154456.2| Mus musculus BAC clone RP23-186O10 from chromosom... 40 5.4
31gb|AC154588.2| Mus musculus BAC clone RP23-363L9 from chromosome... 40 5.4
32dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
33gb|AC140001.8| Mus musculus chromosome 5, clone RP24-276E6, comp... 40 5.4
34dbj|AK107074.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
35emb|AJ314901.1|HSA314901 Homo sapiens partial OBSCN gene for obs... 40 5.4
36dbj|AK062360.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
37gb|AY107648.1| Zea mays PCO091217 mRNA sequence 40 5.4
38gb|AF075251.1|AF075251 Venezuelan equine encephalitis virus stra... 40 5.4
39emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa... 40 5.4
40gb|AC131654.7| Mus musculus BAC clone RP23-232K4 from 10, comple... 40 5.4
41emb|AL161871.6|CNS01RHN Human chromosome 14 DNA sequence BAC R-6... 40 5.4
42gb|L04598.1|EEVE321X Venezuelan equine encephalitis (VEE) virus ... 40 5.4 
>gb|M24425.1|BLYACPI Barley acyl carrier protein I (ACP I) mRNA, complete cds
          Length = 768

 Score =  710 bits (358), Expect = 0.0
 Identities = 367/370 (99%)
 Strand = Plus / Plus

                                                                       
Query: 32  cgagcagcgcagcactccacctaccagccggcctcttcccaccgcccccaaattctaccg 91
           |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   cgagcagcgcacgactccacctaccagccggcctcttcccaccgcccccaaattctaccg 60

                                                                       
Query: 92  agcagctcagccggccaacccatggcgcactgcctcgccgccgtttcctccttctcgccg 151
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  agcagctcagccggccaacccatggcgcactgcctcgccgccgtttcctccttctcgccg 120

                                                                       
Query: 152 tccgccgtccgccggcggctgtccagccaggtggctaatgtagtttcgagccggagctca 211
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tccgccgtccgccggcggctgtccagccaggtggctaatgtagtttcgagccggagctca 180

                                                                       
Query: 212 gtttctttccatagccggcagatgagctttgtatccatcagttcaagaccgagttcgctt 271
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gtttctttccatagccggcagatgagctttgtatccatcagttcaagaccgagttcgctt 240

                                                                       
Query: 272 cggtttaagatttgttgtgtggccatgggagaggcacaggccaagaaagagacagtcgac 331
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cggtttaagatttgttgtgcggccatgggagaggcacaggccaagaaagagacagtcgac 300

                                                                       
Query: 332 aaggtttgtatgatagtcaagaagcagctggcagtccctgatggtacacctgtcacagcg 391
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaggtttgtatgatagtcaagaagcagctggcagtccctgatggtacacctgtcacagcg 360

                     
Query: 392 gagtcgaaat 401
           ||||||||||
Sbjct: 361 gagtcgaaat 370
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>gb|M58753.1|BLYACL1 Hordeum vulgare acyl carrier protein I (Acl1) gene, complete cds
          Length = 3822

 Score =  347 bits (175), Expect = 2e-92
 Identities = 181/183 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   gttggtagcagctccagagccaaggacctcccgagcagcgcagcactccacctaccagcc 60
           ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||
Sbjct: 636 gttggtagcagctccagagccaaggacctcccgagcagcgcacgactccacctaccagcc 695

                                                                       
Query: 61  ggcctcttcccaccgcccccaaattctaccgagcagctcagccggccaacccatggcgca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 ggcctcttcccaccgcccccaaattctaccgagcagctcagccggccaacccatggcgca 755

                                                                       
Query: 121 ctgcctcgccgccgtttcctccttctcgccgtccgccgtccgccggcggctgtccagcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ctgcctcgccgccgtttcctccttctcgccgtccgccgtccgccggcggctgtccagcca 815

              
Query: 181 ggt 183
           |||
Sbjct: 816 ggt 818



 Score =  222 bits (112), Expect = 7e-55
 Identities = 112/112 (100%)
 Strand = Plus / Plus

                                                                        
Query: 179  caggtggctaatgtagtttcgagccggagctcagtttctttccatagccggcagatgagc 238
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1897 caggtggctaatgtagtttcgagccggagctcagtttctttccatagccggcagatgagc 1956

                                                                
Query: 239  tttgtatccatcagttcaagaccgagttcgcttcggtttaagatttgttgtg 290
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1957 tttgtatccatcagttcaagaccgagttcgcttcggtttaagatttgttgtg 2008



 Score =  218 bits (110), Expect = 1e-53
 Identities = 110/110 (100%)
 Strand = Plus / Plus

                                                                        
Query: 292  ggccatgggagaggcacaggccaagaaagagacagtcgacaaggtttgtatgatagtcaa 351
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2578 ggccatgggagaggcacaggccaagaaagagacagtcgacaaggtttgtatgatagtcaa 2637

                                                              
Query: 352  gaagcagctggcagtccctgatggtacacctgtcacagcggagtcgaaat 401
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2638 gaagcagctggcagtccctgatggtacacctgtcacagcggagtcgaaat 2687
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>dbj|AK120370.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070J18, full
           insert sequence
          Length = 826

 Score = 79.8 bits (40), Expect = 6e-12
 Identities = 93/110 (84%), Gaps = 3/110 (2%)
 Strand = Plus / Plus

                                                                       
Query: 110 cccatggcgcactgcctcgccgccgtttcctc---cttctcgccgtccgccgtccgccgg 166
           ||||||||||||| |||||||||||   ||||   |||||||||| ||||||  ||||||
Sbjct: 84  cccatggcgcactccctcgccgccgccgcctcgtccttctcgccgcccgccgcacgccgg 143

                                                             
Query: 167 cggctgtccagccaggtggctaatgtagtttcgagccggagctcagtttc 216
           || ||| || | |||||| |||||||| ||||||| ||||||||||||||
Sbjct: 144 cgactgcccggacaggtgactaatgtaatttcgagacggagctcagtttc 193



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 314 aagaaagagacagtcgacaaggtttgtatgatagtcaagaagcagctggcagtccctga 372
           |||||||||||||||||||||||||| |  ||||| ||||  ||||||||| |||||||
Sbjct: 273 aagaaagagacagtcgacaaggtttgcaacatagttaagacacagctggcactccctga 331
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>dbj|AK060472.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-012-E08, full
           insert sequence
          Length = 820

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 91/109 (83%), Gaps = 2/109 (1%)
 Strand = Plus / Plus

                                                                       
Query: 110 cccatggcgcactgcctcgccgccgtttcctccttct--cgccgtccgccgtccgccggc 167
           ||||||||||||| |||||||||||   |||| | ||  ||||| ||||||  |||||||
Sbjct: 72  cccatggcgcactccctcgccgccgccgcctcgtcctttcgccgcccgccgcacgccggc 131

                                                            
Query: 168 ggctgtccagccaggtggctaatgtagtttcgagccggagctcagtttc 216
           | ||| || | |||||| |||||||| ||||||| ||||||||||||||
Sbjct: 132 gactgcccggacaggtgactaatgtaatttcgagacggagctcagtttc 180



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 52/59 (88%)
 Strand = Plus / Plus

                                                                      
Query: 314 aagaaagagacagtcgacaaggtttgtatgatagtcaagaagcagctggcagtccctga 372
           |||||||||||||||||||||||||| |  ||||| ||||  ||||||||| |||||||
Sbjct: 260 aagaaagagacagtcgacaaggtttgcaacatagttaagacacagctggcactccctga 318
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                            
Query: 308      caggccaagaaagagacagtcgacaaggtttgtatgatagtcaagaagcagctggcagtc 367
                ||||| |||||||||||||||||||||||||| |  ||||| ||||  ||||||||| ||
Sbjct: 21276923 caggctaagaaagagacagtcgacaaggtttgcaacatagttaagacacagctggcactc 21276864

                     
Query: 368      cctga 372
                |||||
Sbjct: 21276863 cctga 21276859



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 179      caggtggctaatgtagtttcgagccggagctcagtttc 216
                |||||| |||||||| ||||||| ||||||||||||||
Sbjct: 21277538 caggtgactaatgtaatttcgagacggagctcagtttc 21277501



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 110      cccatggcgcactgcctcgccgccg 134
                ||||||||||||| |||||||||||
Sbjct: 21279191 cccatggcgcactccctcgccgccg 21279167



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 144      tctcgccgtccgccgtccgc 163
                ||||||||||||||||||||
Sbjct: 14550416 tctcgccgtccgccgtccgc 14550435
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                            
Query: 308      caggccaagaaagagacagtcgacaaggtttgtatgatagtcaagaagcagctggcagtc 367
                ||||| |||||||||||||||||||||||||| |  ||||| ||||  ||||||||| ||
Sbjct: 21203142 caggctaagaaagagacagtcgacaaggtttgcaacatagttaagacacagctggcactc 21203083

                     
Query: 368      cctga 372
                |||||
Sbjct: 21203082 cctga 21203078



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                      
Query: 179      caggtggctaatgtagtttcgagccggagctcagtttc 216
                |||||| |||||||| ||||||| ||||||||||||||
Sbjct: 21203757 caggtgactaatgtaatttcgagacggagctcagtttc 21203720



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 110      cccatggcgcactgcctcgccgccg 134
                ||||||||||||| |||||||||||
Sbjct: 21205410 cccatggcgcactccctcgccgccg 21205386



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 144      tctcgccgtccgccgtccgc 163
                ||||||||||||||||||||
Sbjct: 14504700 tctcgccgtccgccgtccgc 14504719
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>emb|AL713932.4|CNS07YPD Oryza sativa chromosome 12, . BAC OSJNBb0094E08 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137571

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                         
Query: 308   caggccaagaaagagacagtcgacaaggtttgtatgatagtcaagaagcagctggcagtc 367
             ||||| |||||||||||||||||||||||||| |  ||||| ||||  ||||||||| ||
Sbjct: 13277 caggctaagaaagagacagtcgacaaggtttgcaacatagttaagacacagctggcactc 13336

                  
Query: 368   cctga 372
             |||||
Sbjct: 13337 cctga 13341



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 179   caggtggctaatgtagtttcgagccggagctcagtttc 216
             |||||| |||||||| ||||||| ||||||||||||||
Sbjct: 12662 caggtgactaatgtaatttcgagacggagctcagtttc 12699



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 110   cccatggcgcactgcctcgccgccg 134
             ||||||||||||| |||||||||||
Sbjct: 11009 cccatggcgcactccctcgccgccg 11033
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>emb|AL713937.3|CNS07YPI Oryza sativa chromosome 12, . BAC OJ1103_B10 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 95132

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                         
Query: 308   caggccaagaaagagacagtcgacaaggtttgtatgatagtcaagaagcagctggcagtc 367
             ||||| |||||||||||||||||||||||||| |  ||||| ||||  ||||||||| ||
Sbjct: 84355 caggctaagaaagagacagtcgacaaggtttgcaacatagttaagacacagctggcactc 84414

                  
Query: 368   cctga 372
             |||||
Sbjct: 84415 cctga 84419



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 179   caggtggctaatgtagtttcgagccggagctcagtttc 216
             |||||| |||||||| ||||||| ||||||||||||||
Sbjct: 83740 caggtgactaatgtaatttcgagacggagctcagtttc 83777



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 110   cccatggcgcactgcctcgccgccg 134
             ||||||||||||| |||||||||||
Sbjct: 82087 cccatggcgcactccctcgccgccg 82111
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>gb|AY110717.1| Zea mays CL8824_1 mRNA sequence
          Length = 900

 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 76/91 (83%)
 Strand = Plus / Minus

                                                                       
Query: 195 tttcgagccggagctcagtttctttccatagccggcagatgagctttgtatccatcagtt 254
           |||| ||||||||||| ||||| ||||| ||||    |||||  | |||||||||| |||
Sbjct: 720 tttcaagccggagctcggtttccttccagagccacaggatgacttctgtatccatccgtt 661

                                          
Query: 255 caagaccgagttcgcttcggtttaagatttg 285
           ||||||| ||||| |||||||| ||||||||
Sbjct: 660 caagaccaagttctcttcggttcaagatttg 630



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 314 aagaaagagacagtcgacaaggtttgtatgatagtcaagaagcagctggc 363
           ||||| ||||||||||||||||| ||||  ||||| ||| ||||||||||
Sbjct: 619 aagaaggagacagtcgacaaggtctgtagtatagtgaaggagcagctggc 570
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>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 340     tatgatagtcaagaagcagct 360
               |||||||||||||||||||||
Sbjct: 2097152 tatgatagtcaagaagcagct 2097132
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>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 340     tatgatagtcaagaagcagct 360
               |||||||||||||||||||||
Sbjct: 2055575 tatgatagtcaagaagcagct 2055555
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>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 340     tatgatagtcaagaagcagct 360
               |||||||||||||||||||||
Sbjct: 2082360 tatgatagtcaagaagcagct 2082340
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>gb|AY623761.1| Rattus norvegicus defensin alpha 9 (Defa9) gene, complete cds
          Length = 4197

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 342  tgatagtcaagaagcagctgg 362
            |||||||||||||||||||||
Sbjct: 3673 tgatagtcaagaagcagctgg 3653
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>gb|AC154503.3| Mus musculus BAC clone RP24-89J21 from chromosome 13, complete sequence
          Length = 176432

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 169    gctgtccagccaggtggctaa 189
              |||||||||||||||||||||
Sbjct: 103336 gctgtccagccaggtggctaa 103316
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>gb|AC154725.3| Mus musculus BAC clone RP23-125L8 from chromosome 13, complete sequence
          Length = 204262

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 169   gctgtccagccaggtggctaa 189
             |||||||||||||||||||||
Sbjct: 31357 gctgtccagccaggtggctaa 31337
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 147      cgccgtccgccgtccgccggc 167
                |||||||||||||||||||||
Sbjct: 21031268 cgccgtccgccgtccgccggc 21031248
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>dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1274F11
          Length = 171257

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 147    cgccgtccgccgtccgccggc 167
              |||||||||||||||||||||
Sbjct: 123357 cgccgtccgccgtccgccggc 123337
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>dbj|AK060244.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-G05, full
           insert sequence
          Length = 724

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 147 cgccgtccgccgtccgccggc 167
           |||||||||||||||||||||
Sbjct: 68  cgccgtccgccgtccgccggc 88
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>dbj|AB109206.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone: P0478E02
          Length = 140715

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 147   cgccgtccgccgtccgccggc 167
             |||||||||||||||||||||
Sbjct: 52568 cgccgtccgccgtccgccggc 52548
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>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete
              sequence
          Length = 787999

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    aagaaagagacagtcgacaa 333
              ||||||||||||||||||||
Sbjct: 286784 aagaaagagacagtcgacaa 286765
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>ref|NM_052843.2| Homo sapiens obscurin, cytoskeletal calmodulin and titin-interacting
            RhoGEF (OBSCN), mRNA
          Length = 20431

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 195  tttcgagccggagctcagtttctt 218
            |||||||| |||||||||||||||
Sbjct: 4781 tttcgagctggagctcagtttctt 4758
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>gb|AC130728.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0663C08,
             complete sequence
          Length = 142196

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 146   tcgccgtccgccgtccgccg 165
             ||||||||||||||||||||
Sbjct: 50449 tcgccgtccgccgtccgccg 50430
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>gb|AC160533.6| Mus musculus chromosome 5, clone RP24-242L17, complete sequence
          Length = 170409

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    acaggccaagaaagagacag 326
              ||||||||||||||||||||
Sbjct: 129237 acaggccaagaaagagacag 129256
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>emb|CT010574.8| Mouse DNA sequence from clone RP23-269E16 on chromosome 16, complete
            sequence
          Length = 167912

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 302  gaggcacaggccaagaaagagaca 325
            |||||||||||||||| |||||||
Sbjct: 4750 gaggcacaggccaagacagagaca 4773
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>emb|CR388163.10| Zebrafish DNA sequence from clone CH211-247L8 in linkage group 15,
              complete sequence
          Length = 182247

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 268    gcttcggtttaagatttgtt 287
              ||||||||||||||||||||
Sbjct: 169846 gcttcggtttaagatttgtt 169865
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>emb|AL353593.33| Human DNA sequence from clone RP5-1139B12 on chromosome 1q42.1-43
             Contains part of the OBSCN gene for obscurin cytoskeletal
             calmodulin and titin-interacting RhoGEF protein and four
             CpG islands, complete sequence
          Length = 135964

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 195   tttcgagccggagctcagtttctt 218
             |||||||| |||||||||||||||
Sbjct: 51594 tttcgagctggagctcagtttctt 51571
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>emb|AL353150.25| Human DNA sequence from clone RP11-82L18 on chromosome 9 Contains the
             3' end of a novel gene (SHC3) and a novel gene, complete
             sequence
          Length = 113051

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 335   gtttgtatgatagtcaagaa 354
             ||||||||||||||||||||
Sbjct: 22129 gtttgtatgatagtcaagaa 22148
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>emb|AL939123.1|SCO939123 Streptomyces coelicolor A3(2) complete genome; segment 20/29
          Length = 300100

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 141    ccttctcgccgtccgccgtc 160
              ||||||||||||||||||||
Sbjct: 187318 ccttctcgccgtccgccgtc 187337
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>emb|AJ002535.1|HSAJ2535 Homo sapiens mRNA for obscurin (OBSCN gene)
          Length = 20435

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 195  tttcgagccggagctcagtttctt 218
            |||||||| |||||||||||||||
Sbjct: 4808 tttcgagctggagctcagtttctt 4785
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>gb|AC154456.2| Mus musculus BAC clone RP23-186O10 from chromosome 16, complete sequence
          Length = 193598

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 302    gaggcacaggccaagaaagagaca 325
              |||||||||||||||| |||||||
Sbjct: 107824 gaggcacaggccaagacagagaca 107847
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>gb|AC154588.2| Mus musculus BAC clone RP23-363L9 from chromosome 16, complete sequence
          Length = 200787

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 302   gaggcacaggccaagaaagagaca 325
             |||||||||||||||| |||||||
Sbjct: 13768 gaggcacaggccaagacagagaca 13745
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 146      tcgccgtccgccgtccgccg 165
                ||||||||||||||||||||
Sbjct: 29271792 tcgccgtccgccgtccgccg 29271773
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>gb|AC140001.8| Mus musculus chromosome 5, clone RP24-276E6, complete sequence
          Length = 130466

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    acaggccaagaaagagacag 326
              ||||||||||||||||||||
Sbjct: 127650 acaggccaagaaagagacag 127669
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>dbj|AK107074.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-F02, full
           insert sequence
          Length = 1927

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 146 tcgccgtccgccgtccgccg 165
           ||||||||||||||||||||
Sbjct: 60  tcgccgtccgccgtccgccg 79
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>emb|AJ314901.1|HSA314901 Homo sapiens partial OBSCN gene for obscurin, exons B and 17
          Length = 10091

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 195  tttcgagccggagctcagtttctt 218
            |||||||| |||||||||||||||
Sbjct: 6031 tttcgagctggagctcagtttctt 6008
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>dbj|AK062360.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-101-H04, full
           insert sequence
          Length = 461

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 146 tcgccgtccgccgtccgccg 165
           ||||||||||||||||||||
Sbjct: 19  tcgccgtccgccgtccgccg 38
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>gb|AY107648.1| Zea mays PCO091217 mRNA sequence
          Length = 1343

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 138 cctccttctcgccgtccgccgtcc 161
           ||||| ||||||||||||||||||
Sbjct: 50  cctccctctcgccgtccgccgtcc 73
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>gb|AF075251.1|AF075251 Venezuelan equine encephalitis virus strain Everglades Fe3-7c, complete
             genome
          Length = 11395

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 360   tggcagtccctgatggtaca 379
             ||||||||||||||||||||
Sbjct: 10963 tggcagtccctgatggtaca 10944
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>emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa0040E18 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 158261

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 144    tctcgccgtccgccgtccgc 163
              ||||||||||||||||||||
Sbjct: 110877 tctcgccgtccgccgtccgc 110858
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>gb|AC131654.7| Mus musculus BAC clone RP23-232K4 from 10, complete sequence
          Length = 205819

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 306    cacaggccaagaaagagaca 325
              ||||||||||||||||||||
Sbjct: 126782 cacaggccaagaaagagaca 126801
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>emb|AL161871.6|CNS01RHN Human chromosome 14 DNA sequence BAC R-66E7 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 148068

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 352   gaagcagctggcagtccctg 371
             ||||||||||||||||||||
Sbjct: 44951 gaagcagctggcagtccctg 44970
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>gb|L04598.1|EEVE321X Venezuelan equine encephalitis (VEE) virus nucleocapsid protein;
            structural protein; glycopeptide cleavage byproduct (E3);
            envelope glycoprotein (E2 and E1) and polyprotein
            precursor mRNA
          Length = 3910

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 360  tggcagtccctgatggtaca 379
            ||||||||||||||||||||
Sbjct: 3478 tggcagtccctgatggtaca 3459


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,435,417
Number of Sequences: 3902068
Number of extensions: 3435417
Number of successful extensions: 59540
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59257
Number of HSP's gapped (non-prelim): 281
length of query: 401
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 379
effective length of database: 17,147,199,772
effective search space: 6498788713588
effective search space used: 6498788713588
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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