ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet64h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YOL7_CAEEL (Q02334) Hypothetical protein ZK370.7 in chromosome III 28 4.1
2HM13_CAEEL (P17488) Homeobox protein ceh-13 28 5.3
3PCP2_RALSO (Q8XT56) Pyrrolidone-carboxylate peptidase 2 (EC 3.4.... 28 5.3
4CATA_SALTY (P17750) Peroxidase/catalase HPI (EC 1.11.1.6) (Catal... 27 9.1
5CATA_SALTI (Q8Z303) Peroxidase/catalase HPI (EC 1.11.1.6) (Catal... 27 9.1

>YOL7_CAEEL (Q02334) Hypothetical protein ZK370.7 in chromosome III|
          Length = 355

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = +3

Query: 24  DRDTQASGTSPTPPRSSLVFQDPLALAHLTYSWLHFT---KKNQPRLRPGLIHRSVARSL 194
           D+D + +  SP+  R S VF+    +A +T+ W  +T   K  +  + P +++ S +  L
Sbjct: 22  DKDVEKADESPSSSRPSFVFK-CYVIASMTFIWTAYTLTIKYTRSTVNPDMMYSSTSVVL 80

Query: 195 LA 200
            A
Sbjct: 81  CA 82



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>HM13_CAEEL (P17488) Homeobox protein ceh-13|
          Length = 202

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 4/51 (7%)
 Frame = +3

Query: 9   GGRHRDRDTQASGTSPTPPRSSLVFQD----PLALAHLTYSWLHFTKKNQP 149
           G  H      ASG SP   RSS    +      A  H TY W+H  +  +P
Sbjct: 53  GNGHVSPPATASGLSPPASRSSNSSAELPTGVTASQHNTYKWMHTKRSQRP 103



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>PCP2_RALSO (Q8XT56) Pyrrolidone-carboxylate peptidase 2 (EC 3.4.19.3)|
           (5-oxoprolyl-peptidase 2) (Pyroglutamyl-peptidase I 2)
           (PGP-I 2) (Pyrase 2)
          Length = 215

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +3

Query: 105 HLTYSWLHFTKKNQPRLRPGLIHRSVARSLLAR 203
           HL Y  +H      PR+R G IH      L AR
Sbjct: 145 HLFYGLMHHIATRAPRMRGGFIHVPATPELAAR 177



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>CATA_SALTY (P17750) Peroxidase/catalase HPI (EC 1.11.1.6)|
           (Catalase-peroxidase) (Hydroperoxidase I)
          Length = 726

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 18  HRDRDTQASGTSPTPPRSSLVFQDPL 95
           HRD   +A    P  P+  L++QDPL
Sbjct: 413 HRDMGPKARYIGPEVPKEDLIWQDPL 438



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>CATA_SALTI (Q8Z303) Peroxidase/catalase HPI (EC 1.11.1.6)|
           (Catalase-peroxidase) (Hydroperoxidase I)
          Length = 726

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +3

Query: 18  HRDRDTQASGTSPTPPRSSLVFQDPL 95
           HRD   +A    P  P+  L++QDPL
Sbjct: 413 HRDMGPKARYIGPEVPKEDLIWQDPL 438


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,428,001
Number of Sequences: 219361
Number of extensions: 702567
Number of successful extensions: 2056
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2056
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 1386249648
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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