>ref|XM_506932.1| PREDICTED Oryza sativa (japonica cultivar-group), P0680A05.9 mRNA
          Length = 1419

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 22 gagacagggacacgcaagcttcaggcacaag 52
          |||| |||||||||||| |||||||||||||
Sbjct: 15 gagaaagggacacgcaaacttcaggcacaag 45

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 22       gagacagggacacgcaagcttcaggcacaag 52
                |||| |||||||||||| |||||||||||||
Sbjct: 29137770 gagaaagggacacgcaaacttcaggcacaag 29137740

>dbj|AP005323.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0680A05
          Length = 168092

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 22    gagacagggacacgcaagcttcaggcacaag 52
             |||| |||||||||||| |||||||||||||
Sbjct: 27738 gagaaagggacacgcaaacttcaggcacaag 27708

>dbj|AK119183.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D03,
          full insert sequence
          Length = 1419

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                         
Query: 22 gagacagggacacgcaagcttcaggcacaag 52
          |||| |||||||||||| |||||||||||||
Sbjct: 15 gagaaagggacacgcaaacttcaggcacaag 45

>dbj|AK107038.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-B11, full
           insert sequence
          Length = 1865

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 22  gagacagggacacgcaagcttcaggcacaag 52
           |||| |||||||||||| |||||||||||||
Sbjct: 505 gagaaagggacacgcaaacttcaggcacaag 475

>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster,
             complete sequence
          Length = 123580

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 272   tttccagggcctgctcgacgacgacg 297
             ||||| ||||||||||||||||||||
Sbjct: 26558 tttccggggcctgctcgacgacgacg 26533

>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 275     ccagggcctgctcgacgacga 295
               |||||||||||||||||||||
Sbjct: 1376232 ccagggcctgctcgacgacga 1376252

>gb|AC115026.16| Mus musculus chromosome 1, clone RP24-238A19, complete sequence
          Length = 191726

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 137  gaagaatcagccaaggcttc 156
            ||||||||||||||||||||
Sbjct: 6510 gaagaatcagccaaggcttc 6529

>gb|AC114629.12| Mus musculus chromosome 1, clone RP24-111F20, complete sequence
          Length = 178437

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 137    gaagaatcagccaaggcttc 156
              ||||||||||||||||||||
Sbjct: 111850 gaagaatcagccaaggcttc 111869

>ref|XM_482677.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2627

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   aagaggagggagacaccgag 24
           ||||||||||||||||||||
Sbjct: 473 aagaggagggagacaccgag 454

>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 335     gcagcagcaggagtggccgg 354
               ||||||||||||||||||||
Sbjct: 3390986 gcagcagcaggagtggccgg 3390967

>gb|AC125044.3| Mus musculus BAC clone RP23-348B10 from chromosome 17, complete sequence
          Length = 222615

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    tacctgcagcagcaggagtg 349
              ||||||||||||||||||||
Sbjct: 121799 tacctgcagcagcaggagtg 121780

>gb|AC083964.3| Homo sapiens chromosome 8, clone RP11-91J19, complete sequence
          Length = 161160

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 10    gagggagacaccgagacagggaca 33
             ||||||||||| ||||||||||||
Sbjct: 18613 gagggagacacagagacagggaca 18636

>emb|AL513366.11| Human DNA sequence from clone CTD-2522E6 on chromosome X Contains the
             RGN gene for regucalcin (senescence marker protein-30)
             (RC, SMP30), the gene for neuronal protein 17.3 (P17.3),
             the RBM10 gene for RNA binding motif protein 10 (MGC997,
             MGC1132, DXS8237E, KIAA0122), an inositol
             1,3,4-triphosphate 5/6 kinase (ITPK1) pseudogene, the UBE1
             gene for ubiquitin-activating enzyme E1 (A1S9T and BN75
             temperature sensitivity complementing) (A1S9, A1ST, GXP1,
             A1S9T, UBE1X, MGC4781), the 5' UTR of the PCTK1 gene for
             PCTAIRE protein kinase 1 and five CpG islands, complete
             sequence
          Length = 145456

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 181   tcgctcgctcgctcttggcg 200
             ||||||||||||||||||||
Sbjct: 36581 tcgctcgctcgctcttggcg 36562

>ref|XM_778035.1| PREDICTED: Strongylocentrotus purpuratus similar to Nucleoprotein
           TPR (LOC577828), mRNA
          Length = 2319

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 agaagaatcagccaaggctt 155
           ||||||||||||||||||||
Sbjct: 201 agaagaatcagccaaggctt 220

>emb|AL939122.1|SCO939122 Streptomyces coelicolor A3(2) complete genome; segment 19/29
          Length = 311000

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 276   cagggcctgctcgacgacgacgac 299
             ||||||||||||||||||| ||||
Sbjct: 52581 cagggcctgctcgacgacggcgac 52558

>gb|AC034159.7| Homo sapiens BAC clone RP11-344G13 from 4, complete sequence
          Length = 202555

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   tcgctcgctcgctcttggcg 200
             ||||||||||||||||||||
Sbjct: 87632 tcgctcgctcgctcttggcg 87651

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 5        aagaggagggagacaccgag 24
                ||||||||||||||||||||
Sbjct: 21832886 aagaggagggagacaccgag 21832905

>gb|AC114547.12| Mus musculus chromosome 8, clone RP24-68M15, complete sequence
          Length = 182611

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     agggagacaccgagacaggg 30
              ||||||||||||||||||||
Sbjct: 108421 agggagacaccgagacaggg 108402

>gb|AC136777.8| Homo sapiens chromosome 8, clone RP11-63E5, complete sequence
          Length = 175263

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 10   gagggagacaccgagacagggaca 33
            ||||||||||| ||||||||||||
Sbjct: 7651 gagggagacacagagacagggaca 7628

>gb|AC103954.9| Homo sapiens chromosome 8, clone CTA-366D10, complete sequence
          Length = 169754

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 10  gagggagacaccgagacagggaca 33
           ||||||||||| ||||||||||||
Sbjct: 663 gagggagacacagagacagggaca 640

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 274    tccagggcctgctcgacgac 293
              ||||||||||||||||||||
Sbjct: 647850 tccagggcctgctcgacgac 647869

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 275     ccagggcctgctcgacgacg 294
               ||||||||||||||||||||
Sbjct: 4444993 ccagggcctgctcgacgacg 4444974

>gb|AE005101.1| Halobacterium sp. NRC-1 section 132 of 170 of the complete genome
          Length = 12730

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 279  ggcctgctcgacgacgacga 298
            ||||||||||||||||||||
Sbjct: 7909 ggcctgctcgacgacgacga 7890

>dbj|AP004665.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0429B05
          Length = 155024

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      aagaggagggagacaccgag 24
              ||||||||||||||||||||
Sbjct: 112469 aagaggagggagacaccgag 112488

>dbj|AP004558.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0409A07
          Length = 146663

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 5     aagaggagggagacaccgag 24
             ||||||||||||||||||||
Sbjct: 33555 aagaggagggagacaccgag 33574

>ref|NM_208274.1| Eremothecium gossypii ABL026Wp (ABL026W), mRNA
          Length = 1443

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 274  tccagggcctgctcgacgac 293
            ||||||||||||||||||||
Sbjct: 1322 tccagggcctgctcgacgac 1341

>dbj|AK067377.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013106M17, full
           insert sequence
          Length = 2627

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 5   aagaggagggagacaccgag 24
           ||||||||||||||||||||
Sbjct: 473 aagaggagggagacaccgag 454

>gb|AE016815.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome II,
              complete sequence
          Length = 867699

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 274    tccagggcctgctcgacgac 293
              ||||||||||||||||||||
Sbjct: 352307 tccagggcctgctcgacgac 352326


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,426,064
Number of Sequences: 3902068
Number of extensions: 2426064
Number of successful extensions: 56435
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56017
Number of HSP's gapped (non-prelim): 418
length of query: 386
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 364
effective length of database: 17,147,199,772
effective search space: 6241580717008
effective search space used: 6241580717008
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)