ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet64f11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191387.1| Oryza sativa (japonica cultivar-group), predic... 141 2e-30
2gb|AY224570.1| Oryza sativa (japonica cultivar-group) isolate 29... 141 2e-30
3dbj|AB110205.1| Oryza sativa (japonica cultivar-group) mRNA for ... 141 2e-30
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
5dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
6dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic D... 141 2e-30
7ref|NM_178005.1| Mus musculus leucine rich repeat transmembrane ... 42 1.5
8gb|AC110257.12| Mus musculus chromosome 3, clone RP23-276I11, co... 42 1.5
9gb|AC132084.2| Mus musculus BAC clone RP24-544J20 from chromosom... 42 1.5
10gb|AC121874.2| Mus musculus BAC clone RP24-124K16 from 18, compl... 42 1.5
11dbj|AK043173.1| Mus musculus 7 days neonate cerebellum cDNA, RIK... 42 1.5
12dbj|AK036155.1| Mus musculus 16 days neonate cerebellum cDNA, RI... 42 1.5
13dbj|AK046818.1| Mus musculus 10 days neonate medulla oblongata c... 42 1.5
14dbj|AK046774.1| Mus musculus 10 days neonate medulla oblongata c... 42 1.5
15gb|AY182027.1| Mus musculus leucine-rich repeat transmembrane ne... 42 1.5
16dbj|AK049920.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 42 1.5
17dbj|AK044705.1| Mus musculus adult retina cDNA, RIKEN full-lengt... 42 1.5
18dbj|AK043784.1| Mus musculus 10 days neonate cortex cDNA, RIKEN ... 42 1.5
19gb|AC012055.9|AC012055 Homo sapiens chromosome 4, clone RP11-248... 42 1.5
20dbj|AK122278.1| Mus musculus mRNA for mKIAA0416 protein 42 1.5
21gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 6.0
22gb|AC003999.2| Homo sapiens PAC clone RP5-1139P1 from 7, complet... 40 6.0
23gb|AC144613.1| Pan troglodytes BAC clone RP43-1F6 from 7, comple... 40 6.0
24emb|AL160410.24| Human DNA sequence from clone RP11-136B8 on chr... 40 6.0
25emb|AL137403.1|HSM802098 Homo sapiens genomic DNA; cDNA DKFZp434... 40 6.0
26gb|AC107871.10| Homo sapiens chromosome 15, clone RP11-315D16, c... 40 6.0
27ref|NM_019968.1| Mus musculus ADP-ribosylation factor-like 10 (A... 40 6.0
28gb|AC067837.6| Homo sapiens chromosome 15, clone RP11-65B16, com... 40 6.0
29tpg|BK001711.1| TPA: TPA_exp: Mus musculus ADP-ribosylation fact... 40 6.0
30gb|AC155262.2| Mus musculus BAC clone RP23-452K4 from chromosome... 40 6.0
31gb|AC098691.2| Homo sapiens chromosome 1 clone RP11-509K22, comp... 40 6.0
32gb|AF205936.1|AF205936 Mus musculus ADP-ribosylation factor-like... 40 6.0
33gb|AC162526.3| Mus musculus BAC clone RP23-50I19 from chromosome... 40 6.0 
>ref|NM_191387.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2964

 Score =  141 bits (71), Expect = 2e-30
 Identities = 128/147 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    attgaagcccttaataatcaacgagagaagctgcaagagcaaagaaagctcctacattca 60
            ||||||||| | ||||||||||| ||||||||||||||||||||||| ||  ||||||||
Sbjct: 2080 attgaagccttgaataatcaacgggagaagctgcaagagcaaagaaaactattacattca 2139

                                                                        
Query: 61   gaccgagaatcaataacagaacaaattcagcaacttgacgtgttgaaagaaccgaaagtt 120
            ||||||||| |||| ||||  |||||||| |||||| | |||||| |||||| |||| ||
Sbjct: 2140 gaccgagaagcaattacagtgcaaattcaacaacttaatgtgttggaagaactgaaaatt 2199

                                       
Query: 121  gattctcagaacaagcaactgtctttg 147
            |||||| | || |||||||||||||||
Sbjct: 2200 gattctgaaaataagcaactgtctttg 2226



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                        
Query: 272  cagtctcaacaccagtatcttgggttcgaaaatgcgctcaggtgatattcaaacgctctc 331
            |||||||||||||  | ||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 2339 cagtctcaacaccgatttcttgggttcgaaaatgtgctcaggtgatattcaaacggtctc 2398

                      
Query: 332  ctgagaagag 341
            | ||||||||
Sbjct: 2399 cagagaagag 2408
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>gb|AY224570.1| Oryza sativa (japonica cultivar-group) isolate 29956 nuclear matrix
           constituent-like protein mRNA, partial cds
          Length = 1121

 Score =  141 bits (71), Expect = 2e-30
 Identities = 128/147 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   attgaagcccttaataatcaacgagagaagctgcaagagcaaagaaagctcctacattca 60
           ||||||||| | ||||||||||| ||||||||||||||||||||||| ||  ||||||||
Sbjct: 529 attgaagccttgaataatcaacgggagaagctgcaagagcaaagaaaactattacattca 588

                                                                       
Query: 61  gaccgagaatcaataacagaacaaattcagcaacttgacgtgttgaaagaaccgaaagtt 120
           ||||||||| |||| ||||  |||||||| |||||| | |||||| |||||| |||| ||
Sbjct: 589 gaccgagaagcaattacagtgcaaattcaacaacttaatgtgttggaagaactgaaaatt 648

                                      
Query: 121 gattctcagaacaagcaactgtctttg 147
           |||||| | || |||||||||||||||
Sbjct: 649 gattctgaaaataagcaactgtctttg 675



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                       
Query: 272 cagtctcaacaccagtatcttgggttcgaaaatgcgctcaggtgatattcaaacgctctc 331
           |||||||||||||  | ||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 788 cagtctcaacaccgatttcttgggttcgaaaatgtgctcaggtgatattcaaacggtctc 847

                     
Query: 332 ctgagaagag 341
           | ||||||||
Sbjct: 848 cagagaagag 857
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>dbj|AB110205.1| Oryza sativa (japonica cultivar-group) mRNA for hypothetical protein,
            complete cds, clone: pBSK-OsNMCP1bEN31
          Length = 2986

 Score =  141 bits (71), Expect = 2e-30
 Identities = 128/147 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    attgaagcccttaataatcaacgagagaagctgcaagagcaaagaaagctcctacattca 60
            ||||||||| | ||||||||||| ||||||||||||||||||||||| ||  ||||||||
Sbjct: 2091 attgaagccttgaataatcaacgggagaagctgcaagagcaaagaaaactattacattca 2150

                                                                        
Query: 61   gaccgagaatcaataacagaacaaattcagcaacttgacgtgttgaaagaaccgaaagtt 120
            ||||||||| |||| ||||  |||||||| |||||| | |||||| |||||| |||| ||
Sbjct: 2151 gaccgagaagcaattacagtgcaaattcaacaacttaatgtgttggaagaactgaaaatt 2210

                                       
Query: 121  gattctcagaacaagcaactgtctttg 147
            |||||| | || |||||||||||||||
Sbjct: 2211 gattctgaaaataagcaactgtctttg 2237



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Plus

                                                                        
Query: 272  cagtctcaacaccagtatcttgggttcgaaaatgcgctcaggtgatattcaaacgctctc 331
            |||||||||||||  | ||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 2350 cagtctcaacaccgatttcttgggttcgaaaatgtgctcaggtgatattcaaacggtctc 2409

                      
Query: 332  ctgagaagag 341
            | ||||||||
Sbjct: 2410 cagagaagag 2419
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  141 bits (71), Expect = 2e-30
 Identities = 128/147 (87%)
 Strand = Plus / Minus

                                                                            
Query: 1        attgaagcccttaataatcaacgagagaagctgcaagagcaaagaaagctcctacattca 60
                ||||||||| | ||||||||||| ||||||||||||||||||||||| ||  ||||||||
Sbjct: 32322516 attgaagccttgaataatcaacgggagaagctgcaagagcaaagaaaactattacattca 32322457

                                                                            
Query: 61       gaccgagaatcaataacagaacaaattcagcaacttgacgtgttgaaagaaccgaaagtt 120
                ||||||||| |||| ||||  |||||||| |||||| | |||||| |||||| |||| ||
Sbjct: 32322456 gaccgagaagcaattacagtgcaaattcaacaacttaatgtgttggaagaactgaaaatt 32322397

                                           
Query: 121      gattctcagaacaagcaactgtctttg 147
                |||||| | || |||||||||||||||
Sbjct: 32322396 gattctgaaaataagcaactgtctttg 32322370



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                            
Query: 272      cagtctcaacaccagtatcttgggttcgaaaatgcgctcaggtgatattcaaacgctctc 331
                |||||||||||||  | ||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 32322257 cagtctcaacaccgatttcttgggttcgaaaatgtgctcaggtgatattcaaacggtctc 32322198

                          
Query: 332      ctgagaagag 341
                | ||||||||
Sbjct: 32322197 cagagaagag 32322188
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>dbj|AP003371.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:B1143G03
          Length = 137770

 Score =  141 bits (71), Expect = 2e-30
 Identities = 128/147 (87%)
 Strand = Plus / Minus

                                                                        
Query: 1    attgaagcccttaataatcaacgagagaagctgcaagagcaaagaaagctcctacattca 60
            ||||||||| | ||||||||||| ||||||||||||||||||||||| ||  ||||||||
Sbjct: 2013 attgaagccttgaataatcaacgggagaagctgcaagagcaaagaaaactattacattca 1954

                                                                        
Query: 61   gaccgagaatcaataacagaacaaattcagcaacttgacgtgttgaaagaaccgaaagtt 120
            ||||||||| |||| ||||  |||||||| |||||| | |||||| |||||| |||| ||
Sbjct: 1953 gaccgagaagcaattacagtgcaaattcaacaacttaatgtgttggaagaactgaaaatt 1894

                                       
Query: 121  gattctcagaacaagcaactgtctttg 147
            |||||| | || |||||||||||||||
Sbjct: 1893 gattctgaaaataagcaactgtctttg 1867



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                        
Query: 272  cagtctcaacaccagtatcttgggttcgaaaatgcgctcaggtgatattcaaacgctctc 331
            |||||||||||||  | ||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 1754 cagtctcaacaccgatttcttgggttcgaaaatgtgctcaggtgatattcaaacggtctc 1695

                      
Query: 332  ctgagaagag 341
            | ||||||||
Sbjct: 1694 cagagaagag 1685
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>dbj|AP003377.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBb0053G03
          Length = 101901

 Score =  141 bits (71), Expect = 2e-30
 Identities = 128/147 (87%)
 Strand = Plus / Minus

                                                                         
Query: 1     attgaagcccttaataatcaacgagagaagctgcaagagcaaagaaagctcctacattca 60
             ||||||||| | ||||||||||| ||||||||||||||||||||||| ||  ||||||||
Sbjct: 54801 attgaagccttgaataatcaacgggagaagctgcaagagcaaagaaaactattacattca 54742

                                                                         
Query: 61    gaccgagaatcaataacagaacaaattcagcaacttgacgtgttgaaagaaccgaaagtt 120
             ||||||||| |||| ||||  |||||||| |||||| | |||||| |||||| |||| ||
Sbjct: 54741 gaccgagaagcaattacagtgcaaattcaacaacttaatgtgttggaagaactgaaaatt 54682

                                        
Query: 121   gattctcagaacaagcaactgtctttg 147
             |||||| | || |||||||||||||||
Sbjct: 54681 gattctgaaaataagcaactgtctttg 54655



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 64/70 (91%)
 Strand = Plus / Minus

                                                                         
Query: 272   cagtctcaacaccagtatcttgggttcgaaaatgcgctcaggtgatattcaaacgctctc 331
             |||||||||||||  | ||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 54542 cagtctcaacaccgatttcttgggttcgaaaatgtgctcaggtgatattcaaacggtctc 54483

                       
Query: 332   ctgagaagag 341
             | ||||||||
Sbjct: 54482 cagagaagag 54473
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>ref|NM_178005.1| Mus musculus leucine rich repeat transmembrane neuronal 2 (Lrrtm2),
            mRNA
          Length = 3660

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 79   gaacaaattcagcaacttgacgtgt 103
            ||||||| |||||||||||||||||
Sbjct: 1037 gaacaaaatcagcaacttgacgtgt 1061
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>gb|AC110257.12| Mus musculus chromosome 3, clone RP23-276I11, complete sequence
          Length = 178635

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 318   attcaaacgctctcctgagaagagttctg 346
             |||||| | ||||||||||||||||||||
Sbjct: 79118 attcaatccctctcctgagaagagttctg 79146
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>gb|AC132084.2| Mus musculus BAC clone RP24-544J20 from chromosome 5, complete sequence
          Length = 119933

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 65    gagaatcaataacagaacaaa 85
             |||||||||||||||||||||
Sbjct: 92748 gagaatcaataacagaacaaa 92728
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>gb|AC121874.2| Mus musculus BAC clone RP24-124K16 from 18, complete sequence
          Length = 164190

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 79    gaacaaattcagcaacttgacgtgt 103
             ||||||| |||||||||||||||||
Sbjct: 80237 gaacaaaatcagcaacttgacgtgt 80261
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>dbj|AK043173.1| Mus musculus 7 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:A730063P16 product:KIAA0416
            PROTEIN homolog [Homo sapiens], full insert sequence
          Length = 2503

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 79   gaacaaattcagcaacttgacgtgt 103
            ||||||| |||||||||||||||||
Sbjct: 998  gaacaaaatcagcaacttgacgtgt 1022
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>dbj|AK036155.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:9630042D22 product:hypothetical
            transmembraneprotein, full insert sequence
          Length = 2837

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 79   gaacaaattcagcaacttgacgtgt 103
            ||||||| |||||||||||||||||
Sbjct: 1137 gaacaaaatcagcaacttgacgtgt 1161
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>dbj|AK046818.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN
            full-length enriched library, clone:B830014K09
            product:KIAA0416 PROTEIN homolog [Homo sapiens], full
            insert sequence
          Length = 3463

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 79   gaacaaattcagcaacttgacgtgt 103
            ||||||| |||||||||||||||||
Sbjct: 1037 gaacaaaatcagcaacttgacgtgt 1061
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>dbj|AK046774.1| Mus musculus 10 days neonate medulla oblongata cDNA, RIKEN
            full-length enriched library, clone:B830002M08
            product:KIAA0416 PROTEIN homolog [Homo sapiens], full
            insert sequence
          Length = 2574

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 79   gaacaaattcagcaacttgacgtgt 103
            ||||||| |||||||||||||||||
Sbjct: 1143 gaacaaaatcagcaacttgacgtgt 1167
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>gb|AY182027.1| Mus musculus leucine-rich repeat transmembrane neuronal 2 protein
           mRNA, complete cds
          Length = 1548

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 79  gaacaaattcagcaacttgacgtgt 103
           ||||||| |||||||||||||||||
Sbjct: 714 gaacaaaatcagcaacttgacgtgt 738
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>dbj|AK049920.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length enriched
            library, clone:C630011A14 product:hypothetical RNI-like
            structure containing protein, full insert sequence
          Length = 3660

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 79   gaacaaattcagcaacttgacgtgt 103
            ||||||| |||||||||||||||||
Sbjct: 1037 gaacaaaatcagcaacttgacgtgt 1061
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>dbj|AK044705.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library,
            clone:A930034M22 product:KIAA0416 PROTEIN homolog [Homo
            sapiens], full insert sequence
          Length = 2940

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 79   gaacaaattcagcaacttgacgtgt 103
            ||||||| |||||||||||||||||
Sbjct: 1144 gaacaaaatcagcaacttgacgtgt 1168
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>dbj|AK043784.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched
            library, clone:A830032J24 product:hypothetical
            Leucine-rich repeat, outliers/Leucine-rich
            repeat/Leucine-rich repeat, typical subtype containing
            protein, full insert sequence
          Length = 2472

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 79   gaacaaattcagcaacttgacgtgt 103
            ||||||| |||||||||||||||||
Sbjct: 1076 gaacaaaatcagcaacttgacgtgt 1100
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>gb|AC012055.9|AC012055 Homo sapiens chromosome 4, clone RP11-248N22, complete sequence
          Length = 171943

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 31     ctgcaagagcaaagaaagctc 51
              |||||||||||||||||||||
Sbjct: 121652 ctgcaagagcaaagaaagctc 121672
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>dbj|AK122278.1| Mus musculus mRNA for mKIAA0416 protein
          Length = 5650

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 79   gaacaaattcagcaacttgacgtgt 103
            ||||||| |||||||||||||||||
Sbjct: 1128 gaacaaaatcagcaacttgacgtgt 1152
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 140     tgtctttgatagagtctgaaaagt 163
               ||||||||||||||| ||||||||
Sbjct: 2974325 tgtctttgatagagtatgaaaagt 2974302
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>gb|AC003999.2| Homo sapiens PAC clone RP5-1139P1 from 7, complete sequence
          Length = 133457

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 206    ataattcaactcctaagaat 225
              ||||||||||||||||||||
Sbjct: 129648 ataattcaactcctaagaat 129667
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>gb|AC144613.1| Pan troglodytes BAC clone RP43-1F6 from 7, complete sequence
          Length = 177443

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    ataattcaactcctaagaat 225
              ||||||||||||||||||||
Sbjct: 129140 ataattcaactcctaagaat 129121
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>emb|AL160410.24| Human DNA sequence from clone RP11-136B8 on chromosome 20 Contains ESs,
             STSs and GSSs, complete sequence
          Length = 63090

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 203   ttcataattcaactcctaag 222
             ||||||||||||||||||||
Sbjct: 36709 ttcataattcaactcctaag 36728
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>emb|AL137403.1|HSM802098 Homo sapiens genomic DNA; cDNA DKFZp434L092 (from clone DKFZp434L092)
          Length = 2979

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 167  agatgaattatactgtcctc 186
            ||||||||||||||||||||
Sbjct: 1959 agatgaattatactgtcctc 1978
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>gb|AC107871.10| Homo sapiens chromosome 15, clone RP11-315D16, complete sequence
          Length = 171605

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 167   agatgaattatactgtcctc 186
             ||||||||||||||||||||
Sbjct: 84039 agatgaattatactgtcctc 84020
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>ref|NM_019968.1| Mus musculus ADP-ribosylation factor-like 10 (Arl10), mRNA
          Length = 996

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 23  gagagaagctgcaagagcaa 42
           ||||||||||||||||||||
Sbjct: 758 gagagaagctgcaagagcaa 739
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>gb|AC067837.6| Homo sapiens chromosome 15, clone RP11-65B16, complete sequence
          Length = 173919

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 167    agatgaattatactgtcctc 186
              ||||||||||||||||||||
Sbjct: 141263 agatgaattatactgtcctc 141282
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>tpg|BK001711.1| TPA: TPA_exp: Mus musculus ADP-ribosylation factor-like 10 mRNA,
           complete cds
          Length = 996

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 23  gagagaagctgcaagagcaa 42
           ||||||||||||||||||||
Sbjct: 758 gagagaagctgcaagagcaa 739
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>gb|AC155262.2| Mus musculus BAC clone RP23-452K4 from chromosome 13, complete sequence
          Length = 168429

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 23     gagagaagctgcaagagcaa 42
              ||||||||||||||||||||
Sbjct: 110509 gagagaagctgcaagagcaa 110490
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>gb|AC098691.2| Homo sapiens chromosome 1 clone RP11-509K22, complete sequence
          Length = 166885

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 148    atagagtctgaaaagtcgaagatg 171
              ||||||||||||||||| ||||||
Sbjct: 135439 atagagtctgaaaagtccaagatg 135416
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>gb|AF205936.1|AF205936 Mus musculus ADP-ribosylation factor-like membrane-associated
           protein (Arm1) mRNA, complete cds
          Length = 996

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 23  gagagaagctgcaagagcaa 42
           ||||||||||||||||||||
Sbjct: 758 gagagaagctgcaagagcaa 739
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>gb|AC162526.3| Mus musculus BAC clone RP23-50I19 from chromosome 13, complete
            sequence
          Length = 219418

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 23   gagagaagctgcaagagcaa 42
            ||||||||||||||||||||
Sbjct: 3608 gagagaagctgcaagagcaa 3589


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,072,126
Number of Sequences: 3902068
Number of extensions: 4072126
Number of successful extensions: 69979
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69882
Number of HSP's gapped (non-prelim): 97
length of query: 445
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 423
effective length of database: 17,147,199,772
effective search space: 7253265503556
effective search space used: 7253265503556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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