| Clone Name | baet64d12 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB022602.1| Oryza sativa (japonica cultivar-group) OsASA1 mRNA for anthranilate synthase alpha 1 subunit, complete cds Length = 2172 Score = 335 bits (169), Expect = 5e-89 Identities = 253/281 (90%) Strand = Plus / Plus Query: 5 gtagcatcaagtcctgagattcttactcgggtggcaaagaggacagttgtcaatcggcct 64 ||||||||||||||||| |||||||| ||||||| |||||||||| ||||||| |||| Sbjct: 1312 gtagcatcaagtcctgaaattcttacccgggtggaaaagaggacaattgtcaacaggcca 1371 Query: 65 cttgctggaacaattaggagagggaaaacgaaagccgaagacaaggttttagaacaactc 124 ||||||||||||||||| ||||| ||| ||||||| |||||||| |||||||||||||| Sbjct: 1372 cttgctggaacaattagaagaggaaaatcgaaagcagaagacaaagttttagaacaactg 1431 Query: 125 ctgttgagtgatgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaat 184 ||||||||||||| ||||||| |||| ||||| ||||||||||||||||| || |||||| Sbjct: 1432 ctgttgagtgatggaaagcagtgtgctgagcatattatgttagtagatcttggacggaat 1491 Query: 185 gatgttggaaaggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgag 244 |||||||||||||||||||||||||| |||| |||||||||||| ||||||| |||| Sbjct: 1492 gatgttggaaaggtgtccaaaccaggttcagtaaaggtggagaaactgatgaacgttgaa 1551 Query: 245 cgatattcgcatgtcatgcacattagctcaacggttactgg 285 |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1552 cgatattcacatgtcatgcacattagctcaacagttactgg 1592
>ref|XM_470150.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1734 Score = 327 bits (165), Expect = 1e-86 Identities = 252/281 (89%) Strand = Plus / Plus Query: 5 gtagcatcaagtcctgagattcttactcgggtggcaaagaggacagttgtcaatcggcct 64 ||||||||||||||||| |||||||| ||||||| |||||||||| |||| || |||| Sbjct: 1051 gtagcatcaagtcctgaaattcttacccgggtggaaaagaggacaattgttaacaggcca 1110 Query: 65 cttgctggaacaattaggagagggaaaacgaaagccgaagacaaggttttagaacaactc 124 ||||||||||||||||| ||||| ||| ||||||| |||||||| |||||||||||||| Sbjct: 1111 cttgctggaacaattagaagaggaaaatcgaaagcagaagacaaagttttagaacaactg 1170 Query: 125 ctgttgagtgatgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaat 184 ||||||||||||| ||||||| |||| ||||| ||||||||||||||||| || |||||| Sbjct: 1171 ctgttgagtgatggaaagcagtgtgctgagcatattatgttagtagatcttggacggaat 1230 Query: 185 gatgttggaaaggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgag 244 |||||||||||||||||||||||||| |||| |||||||||||| ||||||| |||| Sbjct: 1231 gatgttggaaaggtgtccaaaccaggttcagtaaaggtggagaaactgatgaacgttgaa 1290 Query: 245 cgatattcgcatgtcatgcacattagctcaacggttactgg 285 |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1291 cgatattcacatgtcatgcacattagctcaacagttactgg 1331
>dbj|AK072053.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013112E10, full insert sequence Length = 2186 Score = 327 bits (165), Expect = 1e-86 Identities = 252/281 (89%) Strand = Plus / Plus Query: 5 gtagcatcaagtcctgagattcttactcgggtggcaaagaggacagttgtcaatcggcct 64 ||||||||||||||||| |||||||| ||||||| |||||||||| |||| || |||| Sbjct: 1324 gtagcatcaagtcctgaaattcttacccgggtggaaaagaggacaattgttaacaggcca 1383 Query: 65 cttgctggaacaattaggagagggaaaacgaaagccgaagacaaggttttagaacaactc 124 ||||||||||||||||| ||||| ||| ||||||| |||||||| |||||||||||||| Sbjct: 1384 cttgctggaacaattagaagaggaaaatcgaaagcagaagacaaagttttagaacaactg 1443 Query: 125 ctgttgagtgatgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaat 184 ||||||||||||| ||||||| |||| ||||| ||||||||||||||||| || |||||| Sbjct: 1444 ctgttgagtgatggaaagcagtgtgctgagcatattatgttagtagatcttggacggaat 1503 Query: 185 gatgttggaaaggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgag 244 |||||||||||||||||||||||||| |||| |||||||||||| ||||||| |||| Sbjct: 1504 gatgttggaaaggtgtccaaaccaggttcagtaaaggtggagaaactgatgaacgttgaa 1563 Query: 245 cgatattcgcatgtcatgcacattagctcaacggttactgg 285 |||||||| ||||||||||||||||||||||| |||||||| Sbjct: 1564 cgatattcacatgtcatgcacattagctcaacagttactgg 1604
>gb|BT018753.1| Zea mays clone EL01N0523D10.d mRNA sequence Length = 1924 Score = 230 bits (116), Expect = 2e-57 Identities = 242/284 (85%) Strand = Plus / Plus Query: 8 gcatcaagtcctgagattcttactcgggtggcaaagaggacagttgtcaatcggcctctt 67 ||||| |||||||| |||||||| ||||| |||||||||| | ||||||| || ||| Sbjct: 1095 gcatcgagtcctgaaattcttacccgggtacaaaagaggacaataatcaatcgtccgctt 1154 Query: 68 gctggaacaattaggagagggaaaacgaaagccgaagacaaggttttagaacaactcctg 127 |||||||| || || ||||| ||||| ||||| |||||||| |||||||||| | || Sbjct: 1155 gctggaaccataagaagaggcaaaacaaaagcagaagacaaaactttagaacaattgctt 1214 Query: 128 ttgagtgatgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgat 187 |||||||||||||||||| |||| || || |||||| |||||||||| ||||| |||||| Sbjct: 1215 ttgagtgatgaaaagcagtgtgctgaacatattatgctagtagatcttggccgaaatgat 1274 Query: 188 gttggaaaggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgagcga 247 ||||| ||||||||||||||||| |||| ||||| ||||||||||||||||| || ||| Sbjct: 1275 gttgggaaggtgtccaaaccaggttcagtaaaggtagagaaattgatgaatatcgaacga 1334 Query: 248 tattcgcatgtcatgcacattagctcaacggttactggggagct 291 ||||| |||||||||||||| |||||||| || ||||| ||||| Sbjct: 1335 tattctcatgtcatgcacatcagctcaacagtaactggagagct 1378
>gb|AY105009.1| Zea mays PCO104500 mRNA sequence Length = 1521 Score = 230 bits (116), Expect = 2e-57 Identities = 242/284 (85%) Strand = Plus / Plus Query: 8 gcatcaagtcctgagattcttactcgggtggcaaagaggacagttgtcaatcggcctctt 67 ||||| |||||||| |||||||| ||||| |||||||||| | ||||||| || ||| Sbjct: 693 gcatcgagtcctgaaattcttacccgggtacaaaagaggacaataatcaatcgtccgctt 752 Query: 68 gctggaacaattaggagagggaaaacgaaagccgaagacaaggttttagaacaactcctg 127 |||||||| || || ||||| ||||| ||||| |||||||| |||||||||| | || Sbjct: 753 gctggaaccataagaagaggcaaaacaaaagcagaagacaaaactttagaacaattgctt 812 Query: 128 ttgagtgatgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgat 187 |||||||||||||||||| |||| || || |||||| |||||||||| ||||| |||||| Sbjct: 813 ttgagtgatgaaaagcagtgtgctgaacatattatgctagtagatcttggccgaaatgat 872 Query: 188 gttggaaaggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgagcga 247 ||||| ||||||||||||||||| |||| ||||| ||||||||||||||||| || ||| Sbjct: 873 gttgggaaggtgtccaaaccaggttcagtaaaggtagagaaattgatgaatatcgaacga 932 Query: 248 tattcgcatgtcatgcacattagctcaacggttactggggagct 291 ||||| |||||||||||||| |||||||| || ||||| ||||| Sbjct: 933 tattctcatgtcatgcacatcagctcaacagtaactggagagct 976
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 176 bits (89), Expect = 3e-41 Identities = 140/157 (89%) Strand = Plus / Minus Query: 42 agaggacagttgtcaatcggcctcttgctggaacaattaggagagggaaaacgaaagccg 101 |||||||| |||| || |||| ||||||||||||||||| ||||| ||| ||||||| | Sbjct: 34413644 agaggacaattgttaacaggccacttgctggaacaattagaagaggaaaatcgaaagcag 34413585 Query: 102 aagacaaggttttagaacaactcctgttgagtgatgaaaagcagcgtgccgagcacatta 161 ||||||| |||||||||||||| ||||||||||||| ||||||| |||| ||||| |||| Sbjct: 34413584 aagacaaagttttagaacaactgctgttgagtgatggaaagcagtgtgctgagcatatta 34413525 Query: 162 tgttagtagatctaggccggaatgatgttggaaaggt 198 ||||||||||||| || |||||||||||||||||||| Sbjct: 34413524 tgttagtagatcttggacggaatgatgttggaaaggt 34413488 Score = 99.6 bits (50), Expect = 5e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 195 aggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgagcgatattcgc 254 |||||||||||||||| |||| |||||||||||| ||||||| |||| |||||||| | Sbjct: 34412890 aggtgtccaaaccaggttcagtaaaggtggagaaactgatgaacgttgaacgatattcac 34412831 Query: 255 atgtcatgcacattagctcaac 276 |||||||||||||||||||||| Sbjct: 34412830 atgtcatgcacattagctcaac 34412809 Score = 69.9 bits (35), Expect = 4e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 195 aggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgagcgatattcgc 254 |||| |||||||| ||| | ||||||||||||||||| ||||| ||||| || || || | Sbjct: 8676957 aggtctccaaacctggatctgtgaaggtggagaaattaatgaacattgaacgctactccc 8676898 Query: 255 atgtcatgcacattagctcaacggtta 281 ||||||||||||| || || ||||||| Sbjct: 8676897 atgtcatgcacatcagttccacggtta 8676871 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 5 gtagcatcaagtcctgagattcttactcgggtggcaaag 43 ||||||||||||||||| |||||||| ||||||| |||| Sbjct: 34414464 gtagcatcaagtcctgaaattcttacccgggtggaaaag 34414426 Score = 48.1 bits (24), Expect = 0.016 Identities = 57/68 (83%) Strand = Plus / Minus Query: 131 agtgatgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgatgtt 190 ||||||||||| ||| |||| || || |||||| | |||||| | || ||||||||||| Sbjct: 8677126 agtgatgaaaaacagtgtgctgaacatattatgcttgtagatttgggaaggaatgatgtt 8677067 Query: 191 ggaaaggt 198 |||||||| Sbjct: 8677066 ggaaaggt 8677059
>gb|AC096687.5| Oryza sativa chromosome 3 BAC OSJNBa0010E04 genomic sequence, complete sequence Length = 117505 Score = 176 bits (89), Expect = 3e-41 Identities = 140/157 (89%) Strand = Plus / Plus Query: 42 agaggacagttgtcaatcggcctcttgctggaacaattaggagagggaaaacgaaagccg 101 |||||||| |||| || |||| ||||||||||||||||| ||||| ||| ||||||| | Sbjct: 112523 agaggacaattgttaacaggccacttgctggaacaattagaagaggaaaatcgaaagcag 112582 Query: 102 aagacaaggttttagaacaactcctgttgagtgatgaaaagcagcgtgccgagcacatta 161 ||||||| |||||||||||||| ||||||||||||| ||||||| |||| ||||| |||| Sbjct: 112583 aagacaaagttttagaacaactgctgttgagtgatggaaagcagtgtgctgagcatatta 112642 Query: 162 tgttagtagatctaggccggaatgatgttggaaaggt 198 ||||||||||||| || |||||||||||||||||||| Sbjct: 112643 tgttagtagatcttggacggaatgatgttggaaaggt 112679 Score = 99.6 bits (50), Expect = 5e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 195 aggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgagcgatattcgc 254 |||||||||||||||| |||| |||||||||||| ||||||| |||| |||||||| | Sbjct: 113277 aggtgtccaaaccaggttcagtaaaggtggagaaactgatgaacgttgaacgatattcac 113336 Query: 255 atgtcatgcacattagctcaac 276 |||||||||||||||||||||| Sbjct: 113337 atgtcatgcacattagctcaac 113358 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 5 gtagcatcaagtcctgagattcttactcgggtggcaaag 43 ||||||||||||||||| |||||||| ||||||| |||| Sbjct: 111703 gtagcatcaagtcctgaaattcttacccgggtggaaaag 111741
>gb|AC091247.4| Oryza sativa chromosome 3 BAC OJ1111_B11 genomic sequence, complete sequence Length = 115393 Score = 176 bits (89), Expect = 3e-41 Identities = 140/157 (89%) Strand = Plus / Plus Query: 42 agaggacagttgtcaatcggcctcttgctggaacaattaggagagggaaaacgaaagccg 101 |||||||| |||| || |||| ||||||||||||||||| ||||| ||| ||||||| | Sbjct: 36050 agaggacaattgttaacaggccacttgctggaacaattagaagaggaaaatcgaaagcag 36109 Query: 102 aagacaaggttttagaacaactcctgttgagtgatgaaaagcagcgtgccgagcacatta 161 ||||||| |||||||||||||| ||||||||||||| ||||||| |||| ||||| |||| Sbjct: 36110 aagacaaagttttagaacaactgctgttgagtgatggaaagcagtgtgctgagcatatta 36169 Query: 162 tgttagtagatctaggccggaatgatgttggaaaggt 198 ||||||||||||| || |||||||||||||||||||| Sbjct: 36170 tgttagtagatcttggacggaatgatgttggaaaggt 36206 Score = 99.6 bits (50), Expect = 5e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 195 aggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgagcgatattcgc 254 |||||||||||||||| |||| |||||||||||| ||||||| |||| |||||||| | Sbjct: 36804 aggtgtccaaaccaggttcagtaaaggtggagaaactgatgaacgttgaacgatattcac 36863 Query: 255 atgtcatgcacattagctcaac 276 |||||||||||||||||||||| Sbjct: 36864 atgtcatgcacattagctcaac 36885 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 5 gtagcatcaagtcctgagattcttactcgggtggcaaag 43 ||||||||||||||||| |||||||| ||||||| |||| Sbjct: 35230 gtagcatcaagtcctgaaattcttacccgggtggaaaag 35268
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 176 bits (89), Expect = 3e-41 Identities = 140/157 (89%) Strand = Plus / Minus Query: 42 agaggacagttgtcaatcggcctcttgctggaacaattaggagagggaaaacgaaagccg 101 |||||||| |||| || |||| ||||||||||||||||| ||||| ||| ||||||| | Sbjct: 34504116 agaggacaattgttaacaggccacttgctggaacaattagaagaggaaaatcgaaagcag 34504057 Query: 102 aagacaaggttttagaacaactcctgttgagtgatgaaaagcagcgtgccgagcacatta 161 ||||||| |||||||||||||| ||||||||||||| ||||||| |||| ||||| |||| Sbjct: 34504056 aagacaaagttttagaacaactgctgttgagtgatggaaagcagtgtgctgagcatatta 34503997 Query: 162 tgttagtagatctaggccggaatgatgttggaaaggt 198 ||||||||||||| || |||||||||||||||||||| Sbjct: 34503996 tgttagtagatcttggacggaatgatgttggaaaggt 34503960 Score = 99.6 bits (50), Expect = 5e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 195 aggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgagcgatattcgc 254 |||||||||||||||| |||| |||||||||||| ||||||| |||| |||||||| | Sbjct: 34503362 aggtgtccaaaccaggttcagtaaaggtggagaaactgatgaacgttgaacgatattcac 34503303 Query: 255 atgtcatgcacattagctcaac 276 |||||||||||||||||||||| Sbjct: 34503302 atgtcatgcacattagctcaac 34503281 Score = 69.9 bits (35), Expect = 4e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 195 aggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgagcgatattcgc 254 |||| |||||||| ||| | ||||||||||||||||| ||||| ||||| || || || | Sbjct: 8674792 aggtctccaaacctggatctgtgaaggtggagaaattaatgaacattgaacgctactccc 8674733 Query: 255 atgtcatgcacattagctcaacggtta 281 ||||||||||||| || || ||||||| Sbjct: 8674732 atgtcatgcacatcagttccacggtta 8674706 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 5 gtagcatcaagtcctgagattcttactcgggtggcaaag 43 ||||||||||||||||| |||||||| ||||||| |||| Sbjct: 34504936 gtagcatcaagtcctgaaattcttacccgggtggaaaag 34504898 Score = 48.1 bits (24), Expect = 0.016 Identities = 57/68 (83%) Strand = Plus / Minus Query: 131 agtgatgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgatgtt 190 ||||||||||| ||| |||| || || |||||| | |||||| | || ||||||||||| Sbjct: 8674961 agtgatgaaaaacagtgtgctgaacatattatgcttgtagatttgggaaggaatgatgtt 8674902 Query: 191 ggaaaggt 198 |||||||| Sbjct: 8674901 ggaaaggt 8674894
>gb|DQ127232.1| Zea mays anthranilate synthase alpha subunit mRNA, complete cds Length = 1815 Score = 137 bits (69), Expect = 2e-29 Identities = 135/157 (85%) Strand = Plus / Plus Query: 125 ctgttgagtgatgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaat 184 ||||| ||||||||||| ||| ||||||||||||| ||| | || || | || ||||| Sbjct: 1249 ctgttaagtgatgaaaaacagtgtgccgagcacataatgcttgtggacttgggaaggaat 1308 Query: 185 gatgttggaaaggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgag 244 |||||||| ||||| |||||||||||| |||||||||||||||| |||||||| |||||| Sbjct: 1309 gatgttggcaaggtatccaaaccaggatcagtgaaggtggagaagttgatgaacattgag 1368 Query: 245 cgatattcgcatgtcatgcacattagctcaacggtta 281 |||| || ||||| |||||||| ||||||||||||| Sbjct: 1369 agatactcccatgttatgcacatcagctcaacggtta 1405
>gb|AY104124.1| Zea mays PCO121713 mRNA sequence Length = 2450 Score = 137 bits (69), Expect = 2e-29 Identities = 135/157 (85%) Strand = Plus / Plus Query: 125 ctgttgagtgatgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaat 184 ||||| ||||||||||| ||| ||||||||||||| ||| | || || | || ||||| Sbjct: 1552 ctgttaagtgatgaaaaacagtgtgccgagcacataatgcttgtggacttgggaaggaat 1611 Query: 185 gatgttggaaaggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgag 244 |||||||| ||||| |||||||||||| |||||||||||||||| |||||||| |||||| Sbjct: 1612 gatgttggcaaggtatccaaaccaggatcagtgaaggtggagaagttgatgaacattgag 1671 Query: 245 cgatattcgcatgtcatgcacattagctcaacggtta 281 |||| || ||||| |||||||| ||||||||||||| Sbjct: 1672 agatactcccatgttatgcacatcagctcaacggtta 1708
>ref|NM_187447.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1851 Score = 105 bits (53), Expect = 8e-20 Identities = 116/137 (84%) Strand = Plus / Plus Query: 131 agtgatgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgatgtt 190 ||||||||||| ||| |||| || || |||||| | |||||| | || ||||||||||| Sbjct: 1291 agtgatgaaaaacagtgtgctgaacatattatgcttgtagatttgggaaggaatgatgtt 1350 Query: 191 ggaaaggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgagcgatat 250 |||||||| |||||||| ||| | ||||||||||||||||| ||||| ||||| || || Sbjct: 1351 ggaaaggtctccaaacctggatctgtgaaggtggagaaattaatgaacattgaacgctac 1410 Query: 251 tcgcatgtcatgcacat 267 || |||||||||||||| Sbjct: 1411 tcccatgtcatgcacat 1427
>dbj|AK105648.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F09, full insert sequence Length = 2166 Score = 105 bits (53), Expect = 8e-20 Identities = 116/137 (84%) Strand = Plus / Plus Query: 131 agtgatgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgatgtt 190 ||||||||||| ||| |||| || || |||||| | |||||| | || ||||||||||| Sbjct: 1282 agtgatgaaaaacagtgtgctgaacatattatgcttgtagatttgggaaggaatgatgtt 1341 Query: 191 ggaaaggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgagcgatat 250 |||||||| |||||||| ||| | ||||||||||||||||| ||||| ||||| || || Sbjct: 1342 ggaaaggtctccaaacctggatctgtgaaggtggagaaattaatgaacattgaacgctac 1401 Query: 251 tcgcatgtcatgcacat 267 || |||||||||||||| Sbjct: 1402 tcccatgtcatgcacat 1418
>dbj|AK073501.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033046N16, full insert sequence Length = 1542 Score = 105 bits (53), Expect = 8e-20 Identities = 116/137 (84%) Strand = Plus / Plus Query: 131 agtgatgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgatgtt 190 ||||||||||| ||| |||| || || |||||| | |||||| | || ||||||||||| Sbjct: 811 agtgatgaaaaacagtgtgctgaacatattatgcttgtagatttgggaaggaatgatgtt 870 Query: 191 ggaaaggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgagcgatat 250 |||||||| |||||||| ||| | ||||||||||||||||| ||||| ||||| || || Sbjct: 871 ggaaaggtctccaaacctggatctgtgaaggtggagaaattaatgaacattgaacgctac 930 Query: 251 tcgcatgtcatgcacat 267 || |||||||||||||| Sbjct: 931 tcccatgtcatgcacat 947
>dbj|AB022603.1| Oryza sativa (japonica cultivar-group) OsASA2 mRNA for anthranilate synthase alpha 2 subunit, complete cds Length = 2124 Score = 105 bits (53), Expect = 8e-20 Identities = 116/137 (84%) Strand = Plus / Plus Query: 131 agtgatgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgatgtt 190 ||||||||||| ||| |||| || || |||||| | |||||| | || ||||||||||| Sbjct: 1279 agtgatgaaaaacagtgtgctgaacatattatgcttgtagatttgggaaggaatgatgtt 1338 Query: 191 ggaaaggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgagcgatat 250 |||||||| |||||||| ||| | ||||||||||||||||| ||||| ||||| || || Sbjct: 1339 ggaaaggtctccaaacctggatctgtgaaggtggagaaattaatgaacattgaacgctac 1398 Query: 251 tcgcatgtcatgcacat 267 || |||||||||||||| Sbjct: 1399 tcccatgtcatgcacat 1415
>emb|AJ250008.1|CRO250008 Catharanthus roseus mRNA for anthranilate synthase alpha subunit (asa gene) Length = 2145 Score = 91.7 bits (46), Expect = 1e-15 Identities = 91/106 (85%) Strand = Plus / Plus Query: 180 ggaatgatgttggaaaggtgtccaaaccaggaacagtgaaggtggagaaattgatgaata 239 ||||||||||||||||||| || ||||| || | | ||||||||||||| ||||||| | Sbjct: 1371 ggaatgatgttggaaaggtatcaaaacctggttctgagaaggtggagaaactgatgaaca 1430 Query: 240 ttgagcgatattcgcatgtcatgcacattagctcaacggttactgg 285 |||| | |||||| |||||||||||||| ||||| || |||||||| Sbjct: 1431 ttgaaccatattcacatgtcatgcacatcagctctacagttactgg 1476
>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02, complete sequence Length = 115270 Score = 69.9 bits (35), Expect = 4e-09 Identities = 74/87 (85%) Strand = Plus / Minus Query: 195 aggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgagcgatattcgc 254 |||| |||||||| ||| | ||||||||||||||||| ||||| ||||| || || || | Sbjct: 20608 aggtctccaaacctggatctgtgaaggtggagaaattaatgaacattgaacgctactccc 20549 Query: 255 atgtcatgcacattagctcaacggtta 281 ||||||||||||| || || ||||||| Sbjct: 20548 atgtcatgcacatcagttccacggtta 20522 Score = 48.1 bits (24), Expect = 0.016 Identities = 57/68 (83%) Strand = Plus / Minus Query: 131 agtgatgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgatgtt 190 ||||||||||| ||| |||| || || |||||| | |||||| | || ||||||||||| Sbjct: 20777 agtgatgaaaaacagtgtgctgaacatattatgcttgtagatttgggaaggaatgatgtt 20718 Query: 191 ggaaaggt 198 |||||||| Sbjct: 20717 ggaaaggt 20710
>dbj|AK069180.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009M07, full insert sequence Length = 2715 Score = 69.9 bits (35), Expect = 4e-09 Identities = 74/87 (85%) Strand = Plus / Plus Query: 195 aggtgtccaaaccaggaacagtgaaggtggagaaattgatgaatattgagcgatattcgc 254 |||| |||||||| ||| | ||||||||||||||||| ||||| ||||| || || || | Sbjct: 336 aggtctccaaacctggatctgtgaaggtggagaaattaatgaacattgaacgctactccc 395 Query: 255 atgtcatgcacattagctcaacggtta 281 ||||||||||||| || || ||||||| Sbjct: 396 atgtcatgcacatcagttccacggtta 422 Score = 48.1 bits (24), Expect = 0.016 Identities = 57/68 (83%) Strand = Plus / Plus Query: 131 agtgatgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgatgtt 190 ||||||||||| ||| |||| || || |||||| | |||||| | || ||||||||||| Sbjct: 167 agtgatgaaaaacagtgtgctgaacatattatgcttgtagatttgggaaggaatgatgtt 226 Query: 191 ggaaaggt 198 |||||||| Sbjct: 227 ggaaaggt 234
>gb|L34343.1|RTAANTSYNA Ruta graveolens anthranilate synthase alpha-subunit mRNA, complete cds Length = 2051 Score = 67.9 bits (34), Expect = 2e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 180 ggaatgatgttggaaaggtgtccaaaccaggaacagtgaaggtggagaaattgatgaata 239 ||||||||||||||||||| || |||| || | |||||||| || || | ||||||| Sbjct: 1361 ggaatgatgttggaaaggtctcagaacctggctctgtgaaggttgaaaagctcatgaata 1420 Query: 240 ttgagcgatattcgcatgtcatgcacattagctcaacggttactgg 285 |||| | ||||| ||||| ||||||||||||||||| |||||||| Sbjct: 1421 ttgaacattattctcatgttatgcacattagctcaacagttactgg 1466
>ref|NM_115445.2| Arabidopsis thaliana anthranilate synthase AT3G55870 mRNA, complete cds Length = 1963 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 233 atgaatattgagcgatattcgcatgtcatgcacattagctcaacggt 279 |||||||| ||||| ||||| ||||||||||| |||||||||||||| Sbjct: 1352 atgaatatagagcgttattctcatgtcatgcatattagctcaacggt 1398
>gb|BT000615.1| Arabidopsis thaliana anthranilate synthase alpha-1 chain-like protein (At3g55870/F27K19_50) mRNA, complete cds Length = 1479 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 233 atgaatattgagcgatattcgcatgtcatgcacattagctcaacggt 279 |||||||| ||||| ||||| ||||||||||| |||||||||||||| Sbjct: 1006 atgaatatagagcgttattctcatgtcatgcatattagctcaacggt 1052
>emb|AL163832.1|ATF27K19 Arabidopsis thaliana DNA chromosome 3, BAC clone F27K19 Length = 95111 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 233 atgaatattgagcgatattcgcatgtcatgcacattagctcaacggt 279 |||||||| ||||| ||||| ||||||||||| |||||||||||||| Sbjct: 17997 atgaatatagagcgttattctcatgtcatgcatattagctcaacggt 18043
>gb|AF424611.1|AF424611 Arabidopsis thaliana AT3g55870/F27K19_50 mRNA, complete cds Length = 1964 Score = 61.9 bits (31), Expect = 1e-06 Identities = 43/47 (91%) Strand = Plus / Plus Query: 233 atgaatattgagcgatattcgcatgtcatgcacattagctcaacggt 279 |||||||| ||||| ||||| ||||||||||| |||||||||||||| Sbjct: 1352 atgaatatagagcgttattctcatgtcatgcatattagctcaacggt 1398
>gb|AY753656.1| Camptotheca acuminata anthranilate synthase alpha 2 (ASA2) mRNA, complete cds Length = 1984 Score = 60.0 bits (30), Expect = 4e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 240 ttgagcgatattcgcatgtcatgcacattagctcaacggttactggggag 289 |||| |||||||| ||||| |||||||| ||||| ||||||||||||||| Sbjct: 1359 ttgaacgatattcccatgtgatgcacatcagctccacggttactggggag 1408
>gb|L34344.1|RTAANTSYNB Ruta graveolens anthranilate synthase alpha-subunit mRNA, complete cds Length = 1993 Score = 58.0 bits (29), Expect = 2e-05 Identities = 83/101 (82%) Strand = Plus / Plus Query: 179 cggaatgatgttggaaaggtgtccaaaccaggaacagtgaaggtggagaaattgatgaat 238 |||||||||||||| ||||| || ||| | || | ||||| ||||| || |||||||| Sbjct: 1417 cggaatgatgttggcaaggtttcaaaatctggttctgtgaaagtggaaaagctgatgaat 1476 Query: 239 attgagcgatattcgcatgtcatgcacattagctcaacggt 279 |||| |||||||| ||||| |||||||| ||||| ||||| Sbjct: 1477 gttgaacgatattcacatgttatgcacataagctctacggt 1517
>ref|NM_120655.2| Arabidopsis thaliana ASA1 (ANTHRANILATE SYNTHASE ALPHA SUBUNIT 1); anthranilate synthase AT5G05730 (ASA1) mRNA, complete cds Length = 2047 Score = 48.1 bits (24), Expect = 0.016 Identities = 54/64 (84%) Strand = Plus / Plus Query: 135 atgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgatgttggaa 194 |||||||||| |||| |||||||| ||||| || ||||| || || || |||||||||| Sbjct: 1327 atgaaaagcaatgtgctgagcacatcatgttggttgatctcggtcgcaacgatgttggaa 1386 Query: 195 aggt 198 |||| Sbjct: 1387 aggt 1390
>gb|AY072013.1| Arabidopsis thaliana AT5g05730/MJJ3_14 mRNA sequence Length = 2029 Score = 48.1 bits (24), Expect = 0.016 Identities = 54/64 (84%) Strand = Plus / Plus Query: 135 atgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgatgttggaa 194 |||||||||| |||| |||||||| ||||| || ||||| || || || |||||||||| Sbjct: 1328 atgaaaagcaatgtgctgagcacatcatgttggttgatctcggtcgcaacgatgttggaa 1387 Query: 195 aggt 198 |||| Sbjct: 1388 aggt 1391
>emb|BX829784.1|CNS0A1AN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB36ZH05 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1873 Score = 48.1 bits (24), Expect = 0.016 Identities = 54/64 (84%) Strand = Plus / Plus Query: 135 atgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgatgttggaa 194 |||||||||| |||| |||||||| ||||| || ||||| || || || |||||||||| Sbjct: 1276 atgaaaagcaatgtgctgagcacatcatgttggttgatctcggtcgcaacgatgttggaa 1335 Query: 195 aggt 198 |||| Sbjct: 1336 aggt 1339
>dbj|AB214533.1| Eukaryotic synthetic construct mAS1-2 gene for anthranilate synthase, complete cds Length = 2046 Score = 48.1 bits (24), Expect = 0.016 Identities = 54/64 (84%) Strand = Plus / Plus Query: 135 atgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgatgttggaa 194 |||||||||| |||| |||||||| ||||| || ||||| || || || |||||||||| Sbjct: 1400 atgaaaagcaatgtgctgagcacatcatgttggttgatctcggtcgcaacgatgttggaa 1459 Query: 195 aggt 198 |||| Sbjct: 1460 aggt 1463
>emb|BX833192.1|CNS0A0DX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL38ZF02 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 897 Score = 48.1 bits (24), Expect = 0.016 Identities = 54/64 (84%) Strand = Plus / Plus Query: 135 atgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgatgttggaa 194 |||||||||| |||| |||||||| ||||| || ||||| || || || |||||||||| Sbjct: 204 atgaaaagcaatgtgctgagcacatcatgttggttgatctcggtcgcaacgatgttggaa 263 Query: 195 aggt 198 |||| Sbjct: 264 aggt 267
>dbj|AB205196.1| Eukaryotic synthetic construct RNA for anthranilate synthetase alpha subunit, complete cds Length = 1788 Score = 48.1 bits (24), Expect = 0.016 Identities = 54/64 (84%) Strand = Plus / Plus Query: 135 atgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgatgttggaa 194 |||||||||| |||| |||||||| ||||| || ||||| || || || |||||||||| Sbjct: 1235 atgaaaagcaatgtgctgagcacatcatgttggttgatctcggtcgcaacgatgttggaa 1294 Query: 195 aggt 198 |||| Sbjct: 1295 aggt 1298
>dbj|AB005237.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MJJ3 Length = 87835 Score = 48.1 bits (24), Expect = 0.016 Identities = 54/64 (84%) Strand = Plus / Minus Query: 135 atgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgatgttggaa 194 |||||||||| |||| |||||||| ||||| || ||||| || || || |||||||||| Sbjct: 41109 atgaaaagcaatgtgctgagcacatcatgttggttgatctcggtcgcaacgatgttggaa 41050 Query: 195 aggt 198 |||| Sbjct: 41049 aggt 41046
>gb|M92353.1|ATHANSYNAA Arabidopsis thaliana anthranilate synthase alpha subunit gene, complete cds Length = 5908 Score = 48.1 bits (24), Expect = 0.016 Identities = 54/64 (84%) Strand = Plus / Plus Query: 135 atgaaaagcagcgtgccgagcacattatgttagtagatctaggccggaatgatgttggaa 194 |||||||||| |||| |||||||| ||||| || ||||| || || || |||||||||| Sbjct: 4809 atgaaaagcaatgtgctgagcacatcatgttggttgatctcggtcgcaacgatgttggaa 4868 Query: 195 aggt 198 |||| Sbjct: 4869 aggt 4872
>ref|NM_128523.3| Arabidopsis thaliana ASA2; anthranilate synthase AT2G29690 (ASA2) mRNA, complete cds Length = 2068 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 254 catgtcatgcacattagctcaacggt 279 |||||||||||||||||||| ||||| Sbjct: 1421 catgtcatgcacattagctccacggt 1446
>gb|AC005496.3| Arabidopsis thaliana chromosome 2 clone T27A16 map mi54, complete sequence Length = 90665 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Minus Query: 254 catgtcatgcacattagctcaacggt 279 |||||||||||||||||||| ||||| Sbjct: 52581 catgtcatgcacattagctccacggt 52556
>dbj|AK221602.1| Arabidopsis thaliana mRNA for anthranilate synthase, alpha subunit, complete cds, clone: RAFL07-90-B09 Length = 2073 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 254 catgtcatgcacattagctcaacggt 279 |||||||||||||||||||| ||||| Sbjct: 1408 catgtcatgcacattagctccacggt 1433
>emb|BX819469.1|CNS0A8YM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB80ZB08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1954 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 254 catgtcatgcacattagctcaacggt 279 |||||||||||||||||||| ||||| Sbjct: 1398 catgtcatgcacattagctccacggt 1423
>emb|BX820167.1|CNS0A7YD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZA10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 2015 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 254 catgtcatgcacattagctcaacggt 279 |||||||||||||||||||| ||||| Sbjct: 1422 catgtcatgcacattagctccacggt 1447
>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome Length = 2593857 Score = 44.1 bits (22), Expect = 0.24 Identities = 28/30 (93%) Strand = Plus / Minus Query: 239 attgagcgatattcgcatgtcatgcacatt 268 |||||||| ||||| ||||||||||||||| Sbjct: 1754504 attgagcgctattcccatgtcatgcacatt 1754475
>gb|AE017125.1| Helicobacter hepaticus ATCC 51449, complete genome Length = 1799146 Score = 44.1 bits (22), Expect = 0.24 Identities = 28/30 (93%) Strand = Plus / Minus Query: 239 attgagcgatattcgcatgtcatgcacatt 268 |||||||||||||||| ||| ||||||||| Sbjct: 310834 attgagcgatattcgcgtgttatgcacatt 310805
>gb|M92354.1|ATHANSYNAB Arabidopsis thaliana anthranilate synthase alpha subunit gene, complete cds Length = 6661 Score = 44.1 bits (22), Expect = 0.24 Identities = 25/26 (96%) Strand = Plus / Plus Query: 254 catgtcatgcacattagctcaacggt 279 |||||||||||||||||||| ||||| Sbjct: 4945 catgtcatgcacattagctccacggt 4970
>emb|BX321863.1| Nitrosomonas europaea ATCC 19718, complete genome; segment 8/10 Length = 286850 Score = 42.1 bits (21), Expect = 0.96 Identities = 21/21 (100%) Strand = Plus / Plus Query: 248 tattcgcatgtcatgcacatt 268 ||||||||||||||||||||| Sbjct: 202886 tattcgcatgtcatgcacatt 202906
>emb|AL732490.10| Mouse DNA sequence from clone RP23-17C2 on chromosome 11 Contains part of a novel gene, the Phb gene for prohibitin and the 3' end of a novel gene, complete sequence Length = 84919 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 gaacagtgaaggtggagaaa 229 |||||||||||||||||||| Sbjct: 77065 gaacagtgaaggtggagaaa 77084
>dbj|AP000055.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 26/28, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 tggcaaagaggacagttgtc 55 |||||||||||||||||||| Sbjct: 50546 tggcaaagaggacagttgtc 50565
>emb|AL772343.17| Mouse DNA sequence from clone RP23-196N14 on chromosome 4, complete sequence Length = 154059 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 acagtgaaggtggagaaatt 231 |||||||||||||||||||| Sbjct: 71049 acagtgaaggtggagaaatt 71030
>dbj|AP001720.1| Homo sapiens genomic DNA, chromosome 21q, section 64/105 Length = 340000 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 tggcaaagaggacagttgtc 55 |||||||||||||||||||| Sbjct: 232755 tggcaaagaggacagttgtc 232774
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 161 atgttagtagatctaggccg 180 |||||||||||||||||||| Sbjct: 1585437 atgttagtagatctaggccg 1585418
>gb|AF079168.1|AF079168 Nicotiana tabacum feedback-insensitive anthranilate synthase alpha-2 chain (ASA2) mRNA, complete cds Length = 2144 Score = 40.1 bits (20), Expect = 3.8 Identities = 47/56 (83%) Strand = Plus / Plus Query: 152 gagcacattatgttagtagatctaggccggaatgatgttggaaaggtgtccaaacc 207 |||||||| ||| | || ||| |||| || |||||||| ||||||||||| ||||| Sbjct: 1296 gagcacatcatgctggttgatttaggacgaaatgatgtaggaaaggtgtcaaaacc 1351
>dbj|AP000328.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:Q63H12, complete sequence Length = 26105 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 tggcaaagaggacagttgtc 55 |||||||||||||||||||| Sbjct: 14697 tggcaaagaggacagttgtc 14716
>dbj|AP000170.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone B2344F14-f50E8, segment 6/9, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 3.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 tggcaaagaggacagttgtc 55 |||||||||||||||||||| Sbjct: 42514 tggcaaagaggacagttgtc 42533 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,264,443 Number of Sequences: 3902068 Number of extensions: 2264443 Number of successful extensions: 41847 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 41680 Number of HSP's gapped (non-prelim): 168 length of query: 291 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 269 effective length of database: 17,147,199,772 effective search space: 4612596738668 effective search space used: 4612596738668 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)