No.
Definition
Score (bits)
E Value
1 dbj|AK106043.1| Oryza sativa (japonica cultivar-group) cDNA clon...
218
1e-53
2 dbj|AK065358.1| Oryza sativa (japonica cultivar-group) cDNA clon...
218
1e-53
3 dbj|AK059056.1| Oryza sativa (japonica cultivar-group) cDNA clon...
218
1e-53
4 ref|NM_191551.1| Oryza sativa (japonica cultivar-group), predic...
216
4e-53
5 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
159
9e-36
6 dbj|AP003309.3| Oryza sativa (japonica cultivar-group) genomic D...
159
9e-36
7 dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic D...
159
9e-36
8 emb|AL691513.13| Mouse DNA sequence from clone RP23-451C8 on chr...
44
0.37
9 gb|AC157903.3| Mus musculus chromosome 18, clone RP23-341E18, co...
42
1.5
10 gb|AC134581.5| Mus musculus BAC clone RP24-90L20 from chromosome...
42
1.5
11 gb|AC163394.4| Mus musculus chromosome 15, clone RP24-241D13, co...
42
1.5
12 gb|AC102847.3| Mus musculus, clone RP24-406I1, complete sequence
42
1.5
13 gb|AC145332.48| Felis catus clone rp86-207p24, complete sequence
42
1.5
14 gb|AC103808.2| Homo sapiens chromosome 18, clone RP11-94B19, com...
42
1.5
15 dbj|AK022038.1| Homo sapiens cDNA FLJ11976 fis, clone HEMBB1001253
42
1.5
16 gb|AC102162.6| Mus musculus chromosome 18, clone RP23-419P4, com...
42
1.5
17 gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
42
1.5
18 gb|AC165090.3| Mus musculus BAC clone RP23-95H4 from chromosome ...
40
5.8
19 emb|AL162417.23| Human DNA sequence from clone RP11-326L24 on ch...
40
5.8
20 emb|BX640424.1| Bordetella parapertussis strain 12822, complete ...
40
5.8
21 gb|AC107623.2| Homo sapiens chromosome 3 clone RP11-648C16, comp...
40
5.8
22 gb|AC096970.2| Homo sapiens chromosome 3 clone RP11-321A23, comp...
40
5.8
23 ref|XM_394171.2| PREDICTED: Apis mellifera similar to Transcript...
40
5.8
24 gb|AC024560.26| Homo sapiens 3 BAC RP11-496H1 (Roswell Park Canc...
40
5.8
25 gb|AC024937.21| Homo sapiens 3 BAC RP11-480A16 (Roswell Park Can...
40
5.8
26 gb|AC124944.8| Homo sapiens 3 BAC RP11-352G9 (Roswell Park Cance...
40
5.8
27 gb|AF333038.2| Streptomyces viridochromogenes Avilamycin A biosy...
40
5.8
28 gb|AC002319.1|AC002319 Homo sapiens chromosome 9q34, clone 70C11...
40
5.8
29 gb|AC131680.4| Mus musculus BAC clone RP23-346F8 from 8, complet...
40
5.8
30 gb|AC001643.1|AC001643 Genomic sequence from Human 9q34, complet...
40
5.8
>dbj|AK106043.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-206-E03, full
insert sequence
Length = 1617
Score = 218 bits (110), Expect = 1e-53
Identities = 278/332 (83%), Gaps = 4/332 (1%)
Strand = Plus / Plus
Query: 100 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 159
|||||||||||||||| |||| | || | |||| |||||| ||||||| || |||||
Sbjct: 71 ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 127
Query: 160 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 219
||||||||| ||||| |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 128 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 187
Query: 220 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggtgaacgtcgg 279
|| ||||| |||||||| || ||| ||| || ||||||||||||||||||||||||
Sbjct: 188 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 247
Query: 280 ctcgggcggcgtccatgttgacgcgggccatgggatgcctgggggcacgacggtcgatgt 339
| ||||||||||||||| |||||||| || || | ||| || ||||| || || |||||
Sbjct: 248 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 307
Query: 340 gggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactac 399
|||||||||||||||||||| |||||||||||||| || |||||||||||| || ||
Sbjct: 308 aggcaagggtggcgtcggcgtgaacgtgaagcctggttacggcaagcccggcggcaccac 367
Query: 400 ggtcggcgtc-ggcagggcggcgtgggtgtca 430
|||||||||| || ||||||||||||| ||||
Sbjct: 368 ggtcggcgtcgggaagggcggcgtgggagtca 399
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcc 372
||||| |||||||||||||||||||||||
Sbjct: 588 aagggcggcgtcggcgtcaacgtgaagcc 616
Score = 48.1 bits (24), Expect = 0.024
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 403
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 519 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 578
Query: 404 ggcgtcgg 411
||||||||
Sbjct: 579 ggcgtcgg 586
Score = 44.1 bits (22), Expect = 0.37
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 350 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 409
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 456 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 515
Query: 410 gg 411
||
Sbjct: 516 gg 517
>dbj|AK065358.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013011A15, full
insert sequence
Length = 1618
Score = 218 bits (110), Expect = 1e-53
Identities = 278/332 (83%), Gaps = 4/332 (1%)
Strand = Plus / Plus
Query: 100 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 159
|||||||||||||||| |||| | || | |||| |||||| ||||||| || |||||
Sbjct: 72 ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 128
Query: 160 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 219
||||||||| ||||| |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 129 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 188
Query: 220 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggtgaacgtcgg 279
|| ||||| |||||||| || ||| ||| || ||||||||||||||||||||||||
Sbjct: 189 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 248
Query: 280 ctcgggcggcgtccatgttgacgcgggccatgggatgcctgggggcacgacggtcgatgt 339
| ||||||||||||||| |||||||| || || | ||| || ||||| || || |||||
Sbjct: 249 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 308
Query: 340 gggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactac 399
|||||||||||||||||||| |||||||||||||| || |||||||||||| || ||
Sbjct: 309 aggcaagggtggcgtcggcgtgaacgtgaagcctggttacggcaagcccggcggcaccac 368
Query: 400 ggtcggcgtc-ggcagggcggcgtgggtgtca 430
|||||||||| || ||||||||||||| ||||
Sbjct: 369 ggtcggcgtcgggaagggcggcgtgggagtca 400
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcc 372
||||| |||||||||||||||||||||||
Sbjct: 589 aagggcggcgtcggcgtcaacgtgaagcc 617
Score = 48.1 bits (24), Expect = 0.024
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 403
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 520 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 579
Query: 404 ggcgtcgg 411
||||||||
Sbjct: 580 ggcgtcgg 587
Score = 44.1 bits (22), Expect = 0.37
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 350 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 409
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 457 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 516
Query: 410 gg 411
||
Sbjct: 517 gg 518
>dbj|AK059056.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-021-F04, full
insert sequence
Length = 1616
Score = 218 bits (110), Expect = 1e-53
Identities = 278/332 (83%), Gaps = 4/332 (1%)
Strand = Plus / Plus
Query: 100 ctccatggataggctcgtcgcagccggcattcttgccttcctactgatcgcgtcggtagg 159
|||||||||||||||| |||| | || | |||| |||||| ||||||| || |||||
Sbjct: 63 ctccatggataggctcctcgc---ctgcctccttggcttcctgttgatcgcttcagtagg 119
Query: 160 aagccatgcagctcgtgctccggggcaatactgggagtctgctcttcccaacactcccat 219
||||||||| ||||| |||||| |||||||||| | || |||||||||||| |||||||
Sbjct: 120 aagccatgccgctcggactccggagcaatactggaaatcagctcttcccaactctcccat 179
Query: 220 gccaagctccctctctcaactcctcgacacgcaagccggaggcacgtcggtgaacgtcgg 279
|| ||||| |||||||| || ||| ||| || ||||||||||||||||||||||||
Sbjct: 180 cccgagctcgctctctcagcttctcagcactgcaggcggaggcacgtcggtgaacgtcgg 239
Query: 280 ctcgggcggcgtccatgttgacgcgggccatgggatgcctgggggcacgacggtcgatgt 339
| ||||||||||||||| |||||||| || || | ||| || ||||| || || |||||
Sbjct: 240 cgggggcggcgtccatgtcgacgcggggcacggcaagcccggcggcacaaccgttgatgt 299
Query: 340 gggcaagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactac 399
|||||||||||||||||||| |||||||||||||| || |||||||||||| || ||
Sbjct: 300 aggcaagggtggcgtcggcgtgaacgtgaagcctggttacggcaagcccggcggcaccac 359
Query: 400 ggtcggcgtc-ggcagggcggcgtgggtgtca 430
|||||||||| || ||||||||||||| ||||
Sbjct: 360 ggtcggcgtcgggaagggcggcgtgggagtca 391
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcc 372
||||| |||||||||||||||||||||||
Sbjct: 580 aagggcggcgtcggcgtcaacgtgaagcc 608
Score = 48.1 bits (24), Expect = 0.024
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 403
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 511 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 570
Query: 404 ggcgtcgg 411
||||||||
Sbjct: 571 ggcgtcgg 578
Score = 44.1 bits (22), Expect = 0.37
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 350 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 409
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 448 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 507
Query: 410 gg 411
||
Sbjct: 508 gg 509
>ref|NM_191551.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 1290
Score = 216 bits (109), Expect = 4e-53
Identities = 254/301 (84%), Gaps = 1/301 (0%)
Strand = Plus / Plus
Query: 131 cttgccttcctactgatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatac 190
|||| |||||| ||||||| || |||||||||||||| ||||| |||||| |||||||
Sbjct: 25 cttggcttcctgttgatcgcttcagtaggaagccatgccgctcggactccggagcaatac 84
Query: 191 tgggagtctgctcttcccaacactcccatgccaagctccctctctcaactcctcgacacg 250
||| | || |||||||||||| ||||||| || ||||| |||||||| || ||| |||
Sbjct: 85 tggaaatcagctcttcccaactctcccatcccgagctcgctctctcagcttctcagcact 144
Query: 251 caagccggaggcacgtcggtgaacgtcggctcgggcggcgtccatgttgacgcgggccat 310
|| ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||
Sbjct: 145 gcaggcggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcac 204
Query: 311 gggatgcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaag 370
|| | ||| || ||||| || || ||||| |||||||||||||||||||| |||||||||
Sbjct: 205 ggcaagcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaag 264
Query: 371 cctggcagcgccaagcccggcgggactacggtcggcgtc-ggcagggcggcgtgggtgtc 429
||||| || |||||||||||| || |||||||||||| || ||||||||||||| |||
Sbjct: 265 cctggttacggcaagcccggcggcaccacggtcggcgtcgggaagggcggcgtgggagtc 324
Query: 430 a 430
|
Sbjct: 325 a 325
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcc 372
||||| |||||||||||||||||||||||
Sbjct: 514 aagggcggcgtcggcgtcaacgtgaagcc 542
Score = 48.1 bits (24), Expect = 0.024
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 403
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 445 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 504
Query: 404 ggcgtcgg 411
||||||||
Sbjct: 505 ggcgtcgg 512
Score = 44.1 bits (22), Expect = 0.37
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 350 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 409
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 382 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 441
Query: 410 gg 411
||
Sbjct: 442 gg 443
>dbj|AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 159 bits (80), Expect = 9e-36
Identities = 153/176 (86%), Gaps = 1/176 (0%)
Strand = Plus / Plus
Query: 256 cggaggcacgtcggtgaacgtcggctcgggcggcgtccatgttgacgcgggccatgggat 315
||||||||||||||||||||||||| ||||||||||||||| |||||||| || || |
Sbjct: 30584378 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 30584437
Query: 316 gcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctgg 375
||| || ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 30584438 gcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaagcctgg 30584497
Query: 376 cagcgccaagcccggcgggactacggtcggcgtc-ggcagggcggcgtgggtgtca 430
|| |||||||||||| || |||||||||||| || ||||||||||||| ||||
Sbjct: 30584498 ttacggcaagcccggcggcaccacggtcggcgtcgggaagggcggcgtgggagtca 30584553
Score = 81.8 bits (41), Expect = 2e-12
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 145 gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 204
|||||| || |||||||||||||| ||||| |||||| |||||||||| | || |||||
Sbjct: 30583798 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 30583857
Query: 205 tcccaacactcccatgccaagctccctctctca 237
||||||| ||||||| || ||||| ||||||||
Sbjct: 30583858 tcccaactctcccatcccgagctcgctctctca 30583890
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcc 372
||||| |||||||||||||||||||||||
Sbjct: 30584742 aagggcggcgtcggcgtcaacgtgaagcc 30584770
Score = 48.1 bits (24), Expect = 0.024
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 403
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 30584673 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 30584732
Query: 404 ggcgtcgg 411
||||||||
Sbjct: 30584733 ggcgtcgg 30584740
Score = 44.1 bits (22), Expect = 0.37
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 350 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 409
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 30584610 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 30584669
Query: 410 gg 411
||
Sbjct: 30584670 gg 30584671
>dbj|AP003309.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:OSJNBb0036G09
Length = 124118
Score = 159 bits (80), Expect = 9e-36
Identities = 153/176 (86%), Gaps = 1/176 (0%)
Strand = Plus / Plus
Query: 256 cggaggcacgtcggtgaacgtcggctcgggcggcgtccatgttgacgcgggccatgggat 315
||||||||||||||||||||||||| ||||||||||||||| |||||||| || || |
Sbjct: 66982 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 67041
Query: 316 gcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctgg 375
||| || ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 67042 gcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaagcctgg 67101
Query: 376 cagcgccaagcccggcgggactacggtcggcgtc-ggcagggcggcgtgggtgtca 430
|| |||||||||||| || |||||||||||| || ||||||||||||| ||||
Sbjct: 67102 ttacggcaagcccggcggcaccacggtcggcgtcgggaagggcggcgtgggagtca 67157
Score = 81.8 bits (41), Expect = 2e-12
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 145 gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 204
|||||| || |||||||||||||| ||||| |||||| |||||||||| | || |||||
Sbjct: 66402 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 66461
Query: 205 tcccaacactcccatgccaagctccctctctca 237
||||||| ||||||| || ||||| ||||||||
Sbjct: 66462 tcccaactctcccatcccgagctcgctctctca 66494
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcc 372
||||| |||||||||||||||||||||||
Sbjct: 67346 aagggcggcgtcggcgtcaacgtgaagcc 67374
Score = 48.1 bits (24), Expect = 0.024
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 403
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 67277 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 67336
Query: 404 ggcgtcgg 411
||||||||
Sbjct: 67337 ggcgtcgg 67344
Score = 44.1 bits (22), Expect = 0.37
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 350 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 409
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 67214 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 67273
Query: 410 gg 411
||
Sbjct: 67274 gg 67275
>dbj|AP003560.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
clone:B1060H01
Length = 157987
Score = 159 bits (80), Expect = 9e-36
Identities = 153/176 (86%), Gaps = 1/176 (0%)
Strand = Plus / Plus
Query: 256 cggaggcacgtcggtgaacgtcggctcgggcggcgtccatgttgacgcgggccatgggat 315
||||||||||||||||||||||||| ||||||||||||||| |||||||| || || |
Sbjct: 26655 cggaggcacgtcggtgaacgtcggcgggggcggcgtccatgtcgacgcggggcacggcaa 26714
Query: 316 gcctgggggcacgacggtcgatgtgggcaagggtggcgtcggcgtcaacgtgaagcctgg 375
||| || ||||| || || ||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 26715 gcccggcggcacaaccgttgatgtaggcaagggtggcgtcggcgtgaacgtgaagcctgg 26774
Query: 376 cagcgccaagcccggcgggactacggtcggcgtc-ggcagggcggcgtgggtgtca 430
|| |||||||||||| || |||||||||||| || ||||||||||||| ||||
Sbjct: 26775 ttacggcaagcccggcggcaccacggtcggcgtcgggaagggcggcgtgggagtca 26830
Score = 81.8 bits (41), Expect = 2e-12
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 145 gatcgcgtcggtaggaagccatgcagctcgtgctccggggcaatactgggagtctgctct 204
|||||| || |||||||||||||| ||||| |||||| |||||||||| | || |||||
Sbjct: 26075 gatcgcttcagtaggaagccatgccgctcggactccggagcaatactggaaatcagctct 26134
Query: 205 tcccaacactcccatgccaagctccctctctca 237
||||||| ||||||| || ||||| ||||||||
Sbjct: 26135 tcccaactctcccatcccgagctcgctctctca 26167
Score = 50.1 bits (25), Expect = 0.006
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcc 372
||||| |||||||||||||||||||||||
Sbjct: 27019 aagggcggcgtcggcgtcaacgtgaagcc 27047
Score = 48.1 bits (24), Expect = 0.024
Identities = 57/68 (83%)
Strand = Plus / Plus
Query: 344 aagggtggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtc 403
||||| ||||||||||| |||||| |||| ||| || ||||||||| || || || |||
Sbjct: 26950 aagggcggcgtcggcgtgaacgtgcagccaggctacggcaagcccgggggcaccaccgtc 27009
Query: 404 ggcgtcgg 411
||||||||
Sbjct: 27010 ggcgtcgg 27017
Score = 44.1 bits (22), Expect = 0.37
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 350 ggcgtcggcgtcaacgtgaagcctggcagcgccaagcccggcgggactacggtcggcgtc 409
||||| ||||| |||||| ||||||| || |||||||||||| || || |||||||||
Sbjct: 26887 ggcgtgggcgtgaacgtgcagcctgggtacggcaagcccggcggcaccaccgtcggcgtc 26946
Query: 410 gg 411
||
Sbjct: 26947 gg 26948
>emb|AL162417.23 | Human DNA sequence from clone RP11-326L24 on chromosome 9q34.13-34.3
Contains the GTF3C5 gene for general transcription factor
IIIC polypeptide 5 63kDa, the CEL gene for carboxyl ester
lipase (bile salt-stimulated lipase), the CELP gene for
carboxyl ester lipase pseudogene, the RALGDS gene for ral
guanine nucleotide dissociation stimulator, the gene for
Forssman glycolipid synthetase (FS), three novel genes and
six CpG islands, complete sequence
Length = 152863
Score = 40.1 bits (20), Expect = 5.8
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tgctgccctctgccctgccc 100
||||||||||||||||||||
Sbjct: 119706 tgctgccctctgccctgccc 119725
>gb|AC001643.1 |AC001643 Genomic sequence from Human 9q34, complete sequence
Length = 40203
Score = 40.1 bits (20), Expect = 5.8
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 81 tgctgccctctgccctgccc 100
||||||||||||||||||||
Sbjct: 20582 tgctgccctctgccctgccc 20601
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,817,454
Number of Sequences: 3902068
Number of extensions: 2817454
Number of successful extensions: 62693
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62539
Number of HSP's gapped (non-prelim): 140
length of query: 430
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 408
effective length of database: 17,147,199,772
effective search space: 6996057506976
effective search space used: 6996057506976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)