ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet64b02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
15NG4_PINTA (Q6J163) Auxin-induced protein 5NG4 121 8e-28
2MRAY_CORGL (Q8NNN2) Phospho-N-acetylmuramoyl-pentapeptide-transf... 32 0.62
3YEM9_YEAST (P40027) Hypothetical 27.7 kDa protein in PIP1-GLN3 i... 29 5.2
4LGT_HELHP (Q7VIU4) Prolipoprotein diacylglyceryl transferase (EC... 29 6.8

>5NG4_PINTA (Q6J163) Auxin-induced protein 5NG4|
          Length = 410

 Score =  121 bits (304), Expect = 8e-28
 Identities = 64/102 (62%), Positives = 77/102 (75%)
 Frame = +1

Query: 139 EKVKLFMGVLALQFLLAGFHIVSRAALNMGISKLVFIVYRNVISLPLLAPFAYFLEKKDR 318
           E+VKL   +LALQF  AGFHIVSRAALNMG+SK+VF VYRN+++L L+ P AYFLEKK+R
Sbjct: 15  ERVKLHAAMLALQFGYAGFHIVSRAALNMGVSKVVFPVYRNILALMLIGPCAYFLEKKER 74

Query: 319 PPLTLSLLAEFFVLALIGITANQGFYLLGLYHLSPTYASAIQ 444
           P LTLS L +FF+LAL GIT       L +    PT+ASAIQ
Sbjct: 75  PALTLSFLIQFFLLALCGITGQSRILSLRIVLHIPTFASAIQ 116



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>MRAY_CORGL (Q8NNN2) Phospho-N-acetylmuramoyl-pentapeptide-transferase (EC|
           2.7.8.13) (UDP-MurNAc-pentapeptide phosphotransferase)
          Length = 366

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
 Frame = +1

Query: 148 KLFMG---VLALQFLLAGFHIVSRAALNMGISKLVFIVYRNVISLPL------------L 282
           K+FMG    LAL  L+AG  +VSR  L M I   +F++    +++ +            +
Sbjct: 261 KIFMGDTGSLALGGLVAGISVVSRTELLMVIIGALFVIEIASVAIQIGVFKTRGKRVFKM 320

Query: 283 APFAYFLEKKDRPPLTLSLLAEFFVLALIGITANQGFYLLGLYHLS 420
           AP  +  E       T+++   F+++A++ + A  G +     HL+
Sbjct: 321 APIHHHFEALGWAETTVTI--RFWLIAIMAVLAGVGVFYSDWLHLA 364



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>YEM9_YEAST (P40027) Hypothetical 27.7 kDa protein in PIP1-GLN3 intergenic|
           region
          Length = 249

 Score = 29.3 bits (64), Expect = 5.2
 Identities = 19/67 (28%), Positives = 31/67 (46%)
 Frame = +1

Query: 253 YRNVISLPLLAPFAYFLEKKDRPPLTLSLLAEFFVLALIGITANQGFYLLGLYHLSPTYA 432
           Y NV++LPLL  F++ +E      L+++L A+     +I           GL  +  +Y 
Sbjct: 126 YNNVLALPLLLVFSFIMEDWSTKNLSVNLSADSLAAMVIS----------GLMSVGISYC 175

Query: 433 SAIQTWC 453
           S    WC
Sbjct: 176 SG---WC 179



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>LGT_HELHP (Q7VIU4) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 292

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 247 IVYRNVISLPLLAPFAYFLEKKDRPPLTLSLLAEFFVLALIGI 375
           I+Y + + + LL   A+   + +R P+T  LL  FF+   IG+
Sbjct: 31  IMYVSAMLIALLIAKAFITYRNERFPITQELLDSFFIWVEIGV 73


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,490,640
Number of Sequences: 219361
Number of extensions: 607377
Number of successful extensions: 2006
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2005
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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