ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet64b02 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_184112.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1353 Score = 174 bits (88), Expect = 2e-40 Identities = 181/212 (85%) Strand = Plus / Plus Query: 139 gagaaggtgaagctgttcatgggggtgctggcgctgcagttcctgctcgccggcttccac 198 |||||||||||||||||||| || |||||||| |||||||||||||| || || |||||| Sbjct: 135 gagaaggtgaagctgttcataggagtgctggccctgcagttcctgcttgcaggattccac 194 Query: 199 atcgtcagccgggcggcgctcaacatgggcatcagcaagctcgtcttcatcgtctaccgc 258 || || ||| |||| || ||||||||||||||||||||| | || ||||||||||| | Sbjct: 195 attgtgagcagggcagcactcaacatgggcatcagcaagattgtgttcatcgtctatagg 254 Query: 259 aacgtcatctccctccccctcctcgcccccttcgcctacttcctcgagaagaaggacagg 318 ||| ||||||||||| || | ||||| |||||||||||||||||||||||||| || || Sbjct: 255 aacctcatctccctcgccttgctcgcgcccttcgcctacttcctcgagaagaaagataga 314 Query: 319 ccgccgctgaccttgtcgctgctggcggagtt 350 || || |||||||| || |||||| |||||| Sbjct: 315 ccaccactgaccttctctttgctggtggagtt 346
>dbj|AK104596.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E02, full insert sequence Length = 1353 Score = 174 bits (88), Expect = 2e-40 Identities = 181/212 (85%) Strand = Plus / Plus Query: 139 gagaaggtgaagctgttcatgggggtgctggcgctgcagttcctgctcgccggcttccac 198 |||||||||||||||||||| || |||||||| |||||||||||||| || || |||||| Sbjct: 135 gagaaggtgaagctgttcataggagtgctggccctgcagttcctgcttgcaggattccac 194 Query: 199 atcgtcagccgggcggcgctcaacatgggcatcagcaagctcgtcttcatcgtctaccgc 258 || || ||| |||| || ||||||||||||||||||||| | || ||||||||||| | Sbjct: 195 attgtgagcagggcagcactcaacatgggcatcagcaagattgtgttcatcgtctatagg 254 Query: 259 aacgtcatctccctccccctcctcgcccccttcgcctacttcctcgagaagaaggacagg 318 ||| ||||||||||| || | ||||| |||||||||||||||||||||||||| || || Sbjct: 255 aacctcatctccctcgccttgctcgcgcccttcgcctacttcctcgagaagaaagataga 314 Query: 319 ccgccgctgaccttgtcgctgctggcggagtt 350 || || |||||||| || |||||| |||||| Sbjct: 315 ccaccactgaccttctctttgctggtggagtt 346
>dbj|AK104611.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C11, full insert sequence Length = 1369 Score = 174 bits (88), Expect = 2e-40 Identities = 181/212 (85%) Strand = Plus / Plus Query: 139 gagaaggtgaagctgttcatgggggtgctggcgctgcagttcctgctcgccggcttccac 198 |||||||||||||||||||| || |||||||| |||||||||||||| || || |||||| Sbjct: 138 gagaaggtgaagctgttcataggagtgctggccctgcagttcctgcttgcaggattccac 197 Query: 199 atcgtcagccgggcggcgctcaacatgggcatcagcaagctcgtcttcatcgtctaccgc 258 || || ||| |||| || ||||||||||||||||||||| | || ||||||||||| | Sbjct: 198 attgtgagcagggcagcactcaacatgggcatcagcaagattgtgttcatcgtctatagg 257 Query: 259 aacgtcatctccctccccctcctcgcccccttcgcctacttcctcgagaagaaggacagg 318 ||| ||||||||||| || | ||||| |||||||||||||||||||||||||| || || Sbjct: 258 aacctcatctccctcgccttgctcgcgcccttcgcctacttcctcgagaagaaagataga 317 Query: 319 ccgccgctgaccttgtcgctgctggcggagtt 350 || || |||||||| || |||||| |||||| Sbjct: 318 ccaccactgaccttctctttgctggtggagtt 349
>dbj|AK061406.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A04, full insert sequence Length = 1488 Score = 174 bits (88), Expect = 2e-40 Identities = 181/212 (85%) Strand = Plus / Plus Query: 139 gagaaggtgaagctgttcatgggggtgctggcgctgcagttcctgctcgccggcttccac 198 |||||||||||||||||||| || |||||||| |||||||||||||| || || |||||| Sbjct: 132 gagaaggtgaagctgttcataggagtgctggccctgcagttcctgcttgcaggattccac 191 Query: 199 atcgtcagccgggcggcgctcaacatgggcatcagcaagctcgtcttcatcgtctaccgc 258 || || ||| |||| || ||||||||||||||||||||| | || ||||||||||| | Sbjct: 192 attgtgagcagggcagcactcaacatgggcatcagcaagattgtgttcatcgtctatagg 251 Query: 259 aacgtcatctccctccccctcctcgcccccttcgcctacttcctcgagaagaaggacagg 318 ||| ||||||||||| || | ||||| |||||||||||||||||||||||||| || || Sbjct: 252 aacctcatctccctcgccttgctcgcgcccttcgcctacttcctcgagaagaaagataga 311 Query: 319 ccgccgctgaccttgtcgctgctggcggagtt 350 || || |||||||| || |||||| |||||| Sbjct: 312 ccaccactgaccttctctttgctggtggagtt 343
>dbj|AK061369.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-D10, full insert sequence Length = 1039 Score = 174 bits (88), Expect = 2e-40 Identities = 181/212 (85%) Strand = Plus / Plus Query: 139 gagaaggtgaagctgttcatgggggtgctggcgctgcagttcctgctcgccggcttccac 198 |||||||||||||||||||| || |||||||| |||||||||||||| || || |||||| Sbjct: 140 gagaaggtgaagctgttcataggagtgctggccctgcagttcctgcttgcaggattccac 199 Query: 199 atcgtcagccgggcggcgctcaacatgggcatcagcaagctcgtcttcatcgtctaccgc 258 || || ||| |||| || ||||||||||||||||||||| | || ||||||||||| | Sbjct: 200 attgtgagcagggcagcactcaacatgggcatcagcaagattgtgttcatcgtctatagg 259 Query: 259 aacgtcatctccctccccctcctcgcccccttcgcctacttcctcgagaagaaggacagg 318 ||| ||||||||||| || | ||||| |||||||||||||||||||||||||| || || Sbjct: 260 aacctcatctccctcgccttgctcgcgcccttcgcctacttcctcgagaagaaagataga 319 Query: 319 ccgccgctgaccttgtcgctgctggcggagtt 350 || || |||||||| || |||||| |||||| Sbjct: 320 ccaccactgaccttctctttgctggtggagtt 351
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 165 bits (83), Expect = 2e-37 Identities = 149/171 (87%) Strand = Plus / Plus Query: 139 gagaaggtgaagctgttcatgggggtgctggcgctgcagttcctgctcgccggcttccac 198 |||||||||||||||||||| || |||||||| |||||||||||||| || || |||||| Sbjct: 1009398 gagaaggtgaagctgttcataggagtgctggccctgcagttcctgcttgcaggattccac 1009457 Query: 199 atcgtcagccgggcggcgctcaacatgggcatcagcaagctcgtcttcatcgtctaccgc 258 || || ||| |||| || ||||||||||||||||||||| | || ||||||||||| | Sbjct: 1009458 attgtgagcagggcagcactcaacatgggcatcagcaagattgtgttcatcgtctatagg 1009517 Query: 259 aacgtcatctccctccccctcctcgcccccttcgcctacttcctcgagaag 309 ||| ||||||||||| || | ||||| |||||||||||||||||||||||| Sbjct: 1009518 aacctcatctccctcgccttgctcgcgcccttcgcctacttcctcgagaag 1009568 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Plus Query: 240 cgtcttcatcgtctaccgcaacgtcatctccctccccctcctcgcccccttcgcctactt 299 |||| |||||| |||||||||| ||||| || | | ||||||||||||||||||||| Sbjct: 10909677 cgtcctcatcgcctaccgcaacatcatcgccgccgtcttcctcgcccccttcgcctacta 10909736 Query: 300 cctcgaga 307 | |||||| Sbjct: 10909737 cttcgaga 10909744 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cggcggcggcgcaccgggag 141 |||||||||||||||||||| Sbjct: 27285101 cggcggcggcgcaccgggag 27285082 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 11400999 gtgcgggcgcggcggcggcg 11401018 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 1823719 gtgcgggcgcggcggcggcg 1823738
>dbj|AP002747.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698G03 Length = 147857 Score = 165 bits (83), Expect = 2e-37 Identities = 149/171 (87%) Strand = Plus / Plus Query: 139 gagaaggtgaagctgttcatgggggtgctggcgctgcagttcctgctcgccggcttccac 198 |||||||||||||||||||| || |||||||| |||||||||||||| || || |||||| Sbjct: 144843 gagaaggtgaagctgttcataggagtgctggccctgcagttcctgcttgcaggattccac 144902 Query: 199 atcgtcagccgggcggcgctcaacatgggcatcagcaagctcgtcttcatcgtctaccgc 258 || || ||| |||| || ||||||||||||||||||||| | || ||||||||||| | Sbjct: 144903 attgtgagcagggcagcactcaacatgggcatcagcaagattgtgttcatcgtctatagg 144962 Query: 259 aacgtcatctccctccccctcctcgcccccttcgcctacttcctcgagaag 309 ||| ||||||||||| || | ||||| |||||||||||||||||||||||| Sbjct: 144963 aacctcatctccctcgccttgctcgcgcccttcgcctacttcctcgagaag 145013
>dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0494A10 Length = 145576 Score = 165 bits (83), Expect = 2e-37 Identities = 149/171 (87%) Strand = Plus / Plus Query: 139 gagaaggtgaagctgttcatgggggtgctggcgctgcagttcctgctcgccggcttccac 198 |||||||||||||||||||| || |||||||| |||||||||||||| || || |||||| Sbjct: 47066 gagaaggtgaagctgttcataggagtgctggccctgcagttcctgcttgcaggattccac 47125 Query: 199 atcgtcagccgggcggcgctcaacatgggcatcagcaagctcgtcttcatcgtctaccgc 258 || || ||| |||| || ||||||||||||||||||||| | || ||||||||||| | Sbjct: 47126 attgtgagcagggcagcactcaacatgggcatcagcaagattgtgttcatcgtctatagg 47185 Query: 259 aacgtcatctccctccccctcctcgcccccttcgcctacttcctcgagaag 309 ||| ||||||||||| || | ||||| |||||||||||||||||||||||| Sbjct: 47186 aacctcatctccctcgccttgctcgcgcccttcgcctacttcctcgagaag 47236
>ref|XM_483787.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1595 Score = 137 bits (69), Expect = 4e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 217 ctcaacatgggcatcagcaagctcgtcttcatcgtctaccgcaacgtcatctccctcccc 276 |||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| | Sbjct: 248 ctcaacatgggcatcagcaagctcgtcttccccgtctaccgcaacatcatcgccctcatc 307 Query: 277 ctcctcgcccccttcgcctacttcctcgagaagaaggacaggccgccgctgac 329 ||||||| |||||||||||| ||||||||||||||||| |||||| |||||| Sbjct: 308 ctcctcgtccccttcgcctatttcctcgagaagaaggatcggccgcagctgac 360
>ref|XM_507340.1| PREDICTED Oryza sativa (japonica cultivar-group), P0604E01.39 mRNA Length = 1601 Score = 137 bits (69), Expect = 4e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 217 ctcaacatgggcatcagcaagctcgtcttcatcgtctaccgcaacgtcatctccctcccc 276 |||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| | Sbjct: 254 ctcaacatgggcatcagcaagctcgtcttccccgtctaccgcaacatcatcgccctcatc 313 Query: 277 ctcctcgcccccttcgcctacttcctcgagaagaaggacaggccgccgctgac 329 ||||||| |||||||||||| ||||||||||||||||| |||||| |||||| Sbjct: 314 ctcctcgtccccttcgcctatttcctcgagaagaaggatcggccgcagctgac 366
>ref|XM_463858.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1161 Score = 137 bits (69), Expect = 4e-29 Identities = 93/101 (92%) Strand = Plus / Plus Query: 221 acatgggcatcagcaagctcgtcttcatcgtctaccgcaacgtcatctccctccccctcc 280 |||||||| ||||||||||||||||| ||||||||||||| ||||| ||||| ||||| Sbjct: 128 acatgggcgtcagcaagctcgtcttccccgtctaccgcaacctcatcgccctcttcctcc 187 Query: 281 tcgcccccttcgcctacttcctcgagaagaaggacaggccg 321 |||||||||||||||||||||||||||||||||| |||||| Sbjct: 188 tcgcccccttcgcctacttcctcgagaagaaggagaggccg 228 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Plus Query: 347 agttcttcgtgctggcgctcatcgggatcacggcgaaccaggggttctacctgctggggc 406 |||||||| | |||||||| ||||||||| || |||||||| |||||||||||||||| Sbjct: 254 agttcttcttcctggcgctgtgcgggatcaccgccaaccagggcttctacctgctggggc 313 Query: 407 t 407 | Sbjct: 314 t 314
>dbj|AK071683.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023109M16, full insert sequence Length = 1601 Score = 137 bits (69), Expect = 4e-29 Identities = 102/113 (90%) Strand = Plus / Plus Query: 217 ctcaacatgggcatcagcaagctcgtcttcatcgtctaccgcaacgtcatctccctcccc 276 |||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| | Sbjct: 254 ctcaacatgggcatcagcaagctcgtcttccccgtctaccgcaacatcatcgccctcatc 313 Query: 277 ctcctcgcccccttcgcctacttcctcgagaagaaggacaggccgccgctgac 329 ||||||| |||||||||||| ||||||||||||||||| |||||| |||||| Sbjct: 314 ctcctcgtccccttcgcctatttcctcgagaagaaggatcggccgcagctgac 366
>gb|AY106900.1| Zea mays PCO142538 mRNA sequence Length = 1029 Score = 131 bits (66), Expect = 2e-27 Identities = 105/118 (88%) Strand = Plus / Plus Query: 213 ggcgctcaacatgggcatcagcaagctcgtcttcatcgtctaccgcaacgtcatctccct 272 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||| | || Sbjct: 300 ggcgctcaacatgggcatcagcaagctcgtcttccccgtctaccgcaacatcatcgcgct 359 Query: 273 ccccctcctcgcccccttcgcctacttcctcgagaagaaggacaggccgccgctgacc 330 | |||||||| |||||||||||||| || |||||||| |||||||||| ||||||| Sbjct: 360 ctgcctcctcgtgcccttcgcctactttctagagaagaaagacaggccgcagctgacc 417 Score = 63.9 bits (32), Expect = 4e-07 Identities = 81/96 (84%), Gaps = 1/96 (1%) Strand = Plus / Plus Query: 373 atcacggcgaaccaggggttctacctgctggggctgtaccacctgtcgccgacctacgcg 432 |||||||||||||| ||||| ||||| ||||| ||| || || ||||||||| | |||| Sbjct: 460 atcacggcgaaccaagggttttacctcctgggcctggacaacacgtcgccgacgttcgcg 519 Query: 433 tccgcgatccag-acatggtgccggccatcaccttc 467 ||||| |||||| || ||| ||||||||||||||| Sbjct: 520 tccgccatccagaactcggtcccggccatcaccttc 555
>dbj|AK099177.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096J12, full insert sequence Length = 1595 Score = 129 bits (65), Expect = 9e-27 Identities = 101/113 (89%) Strand = Plus / Plus Query: 217 ctcaacatgggcatcagcaagctcgtcttcatcgtctaccgcaacgtcatctccctcccc 276 ||||||||||||||| |||||||||||||| ||||||||||||| ||||| ||||| | Sbjct: 248 ctcaacatgggcatcggcaagctcgtcttccccgtctaccgcaacatcatcgccctcatc 307 Query: 277 ctcctcgcccccttcgcctacttcctcgagaagaaggacaggccgccgctgac 329 ||||||| |||||||||||| ||||||||||||||||| |||||| |||||| Sbjct: 308 ctcctcgtccccttcgcctatttcctcgagaagaaggatcggccgcagctgac 360
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 121 bits (61), Expect = 2e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 217 ctcaacatgggcatcagcaagctcgtcttcatcgtctaccgcaacgtcatctccctcccc 276 |||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| | Sbjct: 28111742 ctcaacatgggcatcagcaagctcgtcttccccgtctaccgcaacatcatcgccctcatc 28111801 Query: 277 ctcctcgcccccttcgcctacttcctcgagaag 309 ||||||| |||||||||||| |||||||||||| Sbjct: 28111802 ctcctcgtccccttcgcctatttcctcgagaag 28111834 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 11489438 gtgcgggcgcggcggcggcg 11489419
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 221 acatgggcatcagcaagctcgtcttcatcgtctaccgcaacgtcatctccctccccctcc 280 |||||||| ||||||||||||||||| ||||||||||||| ||||| ||||| ||||| Sbjct: 764896 acatgggcgtcagcaagctcgtcttccccgtctaccgcaacctcatcgccctcttcctcc 764837 Query: 281 tcgcccccttcgcctacttcctcgagaag 309 ||||||||||||||||||||||||||||| Sbjct: 764836 tcgcccccttcgcctacttcctcgagaag 764808 Score = 85.7 bits (43), Expect = 1e-13 Identities = 103/123 (83%) Strand = Plus / Minus Query: 139 gagaaggtgaagctgttcatgggggtgctggcgctgcagttcctgctcgccggcttccac 198 |||||| |||||||| | ||||||||||||||||||||| | ||||| || ||||| Sbjct: 13506517 gagaagttgaagctgctgctgggggtgctggcgctgcagtgctgcctcgcggggttccat 13506458 Query: 199 atcgtcagccgggcggcgctcaacatgggcatcagcaagctcgtcttcatcgtctaccgc 258 || || | |||| || ||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 13506457 attgtgtccagggcagccctcaacatgggcatcagcaagatcgtcttcaccgtctaccgc 13506398 Query: 259 aac 261 ||| Sbjct: 13506397 aac 13506395 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 347 agttcttcgtgctggcgctcatcgggatcacggcgaaccaggggttctacctgctggggc 406 |||||||| | |||||||| ||||||||| || |||||||| |||||||||||||||| Sbjct: 764679 agttcttcttcctggcgctgtgcgggatcaccgccaaccagggcttctacctgctggggc 764620 Query: 407 t 407 | Sbjct: 764619 t 764619 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 22726747 gtgcgggcgcggcggcggcg 22726766
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0036E06 Length = 137926 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 221 acatgggcatcagcaagctcgtcttcatcgtctaccgcaacgtcatctccctccccctcc 280 |||||||| ||||||||||||||||| ||||||||||||| ||||| ||||| ||||| Sbjct: 43027 acatgggcgtcagcaagctcgtcttccccgtctaccgcaacctcatcgccctcttcctcc 42968 Query: 281 tcgcccccttcgcctacttcctcgagaag 309 ||||||||||||||||||||||||||||| Sbjct: 42967 tcgcccccttcgcctacttcctcgagaag 42939 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 347 agttcttcgtgctggcgctcatcgggatcacggcgaaccaggggttctacctgctggggc 406 |||||||| | |||||||| ||||||||| || |||||||| |||||||||||||||| Sbjct: 42810 agttcttcttcctggcgctgtgcgggatcaccgccaaccagggcttctacctgctggggc 42751 Query: 407 t 407 | Sbjct: 42750 t 42750
>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0604E01 Length = 159049 Score = 121 bits (61), Expect = 2e-24 Identities = 85/93 (91%) Strand = Plus / Plus Query: 217 ctcaacatgggcatcagcaagctcgtcttcatcgtctaccgcaacgtcatctccctcccc 276 |||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| | Sbjct: 109237 ctcaacatgggcatcagcaagctcgtcttccccgtctaccgcaacatcatcgccctcatc 109296 Query: 277 ctcctcgcccccttcgcctacttcctcgagaag 309 ||||||| |||||||||||| |||||||||||| Sbjct: 109297 ctcctcgtccccttcgcctatttcctcgagaag 109329
>dbj|AP004090.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1399_H05 Length = 147670 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 221 acatgggcatcagcaagctcgtcttcatcgtctaccgcaacgtcatctccctccccctcc 280 |||||||| ||||||||||||||||| ||||||||||||| ||||| ||||| ||||| Sbjct: 121791 acatgggcgtcagcaagctcgtcttccccgtctaccgcaacctcatcgccctcttcctcc 121732 Query: 281 tcgcccccttcgcctacttcctcgagaag 309 ||||||||||||||||||||||||||||| Sbjct: 121731 tcgcccccttcgcctacttcctcgagaag 121703 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 347 agttcttcgtgctggcgctcatcgggatcacggcgaaccaggggttctacctgctggggc 406 |||||||| | |||||||| ||||||||| || |||||||| |||||||||||||||| Sbjct: 121574 agttcttcttcctggcgctgtgcgggatcaccgccaaccagggcttctacctgctggggc 121515 Query: 407 t 407 | Sbjct: 121514 t 121514
>dbj|AK106679.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-114-B01, full insert sequence Length = 2106 Score = 121 bits (61), Expect = 2e-24 Identities = 82/89 (92%) Strand = Plus / Minus Query: 221 acatgggcatcagcaagctcgtcttcatcgtctaccgcaacgtcatctccctccccctcc 280 |||||||| ||||||||||||||||| ||||||||||||| ||||| ||||| ||||| Sbjct: 962 acatgggcgtcagcaagctcgtcttccccgtctaccgcaacctcatcgccctcttcctcc 903 Query: 281 tcgcccccttcgcctacttcctcgagaag 309 ||||||||||||||||||||||||||||| Sbjct: 902 tcgcccccttcgcctacttcctcgagaag 874 Score = 58.0 bits (29), Expect = 3e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 347 agttcttcgtgctggcgctcatcgggatcacggcgaaccaggggttctacctgctggggc 406 |||||||| | |||||||| ||||||||| || |||||||| |||||||||||||||| Sbjct: 745 agttcttcttcctggcgctgtgcgggatcaccgccaaccagggcttctacctgctggggc 686 Query: 407 t 407 | Sbjct: 685 t 685
>ref|XM_465336.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1071 Score = 85.7 bits (43), Expect = 1e-13 Identities = 103/123 (83%) Strand = Plus / Plus Query: 139 gagaaggtgaagctgttcatgggggtgctggcgctgcagttcctgctcgccggcttccac 198 |||||| |||||||| | ||||||||||||||||||||| | ||||| || ||||| Sbjct: 16 gagaagttgaagctgctgctgggggtgctggcgctgcagtgctgcctcgcggggttccat 75 Query: 199 atcgtcagccgggcggcgctcaacatgggcatcagcaagctcgtcttcatcgtctaccgc 258 || || | |||| || ||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 76 attgtgtccagggcagccctcaacatgggcatcagcaagatcgtcttcaccgtctaccgc 135 Query: 259 aac 261 ||| Sbjct: 136 aac 138
>dbj|AP005865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0037J12 Length = 118553 Score = 85.7 bits (43), Expect = 1e-13 Identities = 103/123 (83%) Strand = Plus / Minus Query: 139 gagaaggtgaagctgttcatgggggtgctggcgctgcagttcctgctcgccggcttccac 198 |||||| |||||||| | ||||||||||||||||||||| | ||||| || ||||| Sbjct: 21822 gagaagttgaagctgctgctgggggtgctggcgctgcagtgctgcctcgcggggttccat 21763 Query: 199 atcgtcagccgggcggcgctcaacatgggcatcagcaagctcgtcttcatcgtctaccgc 258 || || | |||| || ||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 21762 attgtgtccagggcagccctcaacatgggcatcagcaagatcgtcttcaccgtctaccgc 21703 Query: 259 aac 261 ||| Sbjct: 21702 aac 21700
>dbj|AP004177.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1116_E03 Length = 126845 Score = 85.7 bits (43), Expect = 1e-13 Identities = 103/123 (83%) Strand = Plus / Minus Query: 139 gagaaggtgaagctgttcatgggggtgctggcgctgcagttcctgctcgccggcttccac 198 |||||| |||||||| | ||||||||||||||||||||| | ||||| || ||||| Sbjct: 92446 gagaagttgaagctgctgctgggggtgctggcgctgcagtgctgcctcgcggggttccat 92387 Query: 199 atcgtcagccgggcggcgctcaacatgggcatcagcaagctcgtcttcatcgtctaccgc 258 || || | |||| || ||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 92386 attgtgtccagggcagccctcaacatgggcatcagcaagatcgtcttcaccgtctaccgc 92327 Query: 259 aac 261 ||| Sbjct: 92326 aac 92324
>dbj|AK106554.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-G11, full insert sequence Length = 1567 Score = 50.1 bits (25), Expect = 0.007 Identities = 61/73 (83%) Strand = Plus / Plus Query: 240 cgtcttcatcgtctaccgcaacgtcatctccctccccctcctcgcccccttcgcctactt 299 |||| |||||| |||||||||| ||||| || | | ||||||||||||||||||||| Sbjct: 301 cgtcctcatcgcctaccgcaacatcatcgccgccgtcttcctcgcccccttcgcctacta 360 Query: 300 cctcgagaagaag 312 | |||||| |||| Sbjct: 361 cttcgagaggaag 373
>ref|NM_183664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1143 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Plus Query: 240 cgtcttcatcgtctaccgcaacgtcatctccctccccctcctcgcccccttcgcctactt 299 |||| |||||| |||||||||| ||||| || | | ||||||||||||||||||||| Sbjct: 108 cgtcctcatcgcctaccgcaacatcatcgccgccgtcttcctcgcccccttcgcctacta 167 Query: 300 cctcgaga 307 | |||||| Sbjct: 168 cttcgaga 175
>gb|BC000492.1| Homo sapiens cDNA clone IMAGE:2820069, partial cds Length = 1456 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 165 gctggcgctgcagttcctgctcgc 188 |||||||||||||||||||||||| Sbjct: 192 gctggcgctgcagttcctgctcgc 169
>gb|AY459337.1| Oryza sativa (japonica cultivar-group) clone CL003615.3 R2R3-MYB gene region Length = 42296 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Minus Query: 240 cgtcttcatcgtctaccgcaacgtcatctccctccccctcctcgcccccttcgcctactt 299 |||| |||||| |||||||||| ||||| || | | ||||||||||||||||||||| Sbjct: 32671 cgtcctcatcgcctaccgcaacatcatcgccgccgtcttcctcgcccccttcgcctacta 32612 Query: 300 cctcgaga 307 | |||||| Sbjct: 32611 cttcgaga 32604
>gb|BC011002.2| Homo sapiens hypothetical protein LOC113230, mRNA (cDNA clone IMAGE:3946502), partial cds Length = 1329 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 165 gctggcgctgcagttcctgctcgc 188 |||||||||||||||||||||||| Sbjct: 815 gctggcgctgcagttcctgctcgc 792
>gb|AC022098.9| Homo sapiens chromosome 19 clone CTB-55O6, complete sequence Length = 237931 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 165 gctggcgctgcagttcctgctcgc 188 |||||||||||||||||||||||| Sbjct: 111200 gctggcgctgcagttcctgctcgc 111177
>emb|CR591584.1| full-length cDNA clone CS0DI066YK18 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2098 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 165 gctggcgctgcagttcctgctcgc 188 |||||||||||||||||||||||| Sbjct: 948 gctggcgctgcagttcctgctcgc 925
>ref|XM_937316.1| PREDICTED: Homo sapiens hypothetical protein LOC113230 (LOC113230), mRNA Length = 1419 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 165 gctggcgctgcagttcctgctcgc 188 |||||||||||||||||||||||| Sbjct: 940 gctggcgctgcagttcctgctcgc 917
>ref|XM_053966.10| PREDICTED: Homo sapiens hypothetical protein LOC113230 (LOC113230), mRNA Length = 1419 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Minus Query: 165 gctggcgctgcagttcctgctcgc 188 |||||||||||||||||||||||| Sbjct: 940 gctggcgctgcagttcctgctcgc 917
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Minus Query: 239 tcgtcttcatcgtctaccgcaacgtcatctccctccccctcctcgcccccttcgcctact 298 |||||||| |||||||||| || || || ||||| |||||||||||||| ||||| || Sbjct: 29465732 tcgtcttctgcgtctaccgcgacctcgtcgccctcgccctcctcgcccccgccgccttct 29465673 Query: 299 tcctcgag 306 ||| |||| Sbjct: 29465672 tccgcgag 29465665 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 23675769 gtgcgggcgcggcggcggcg 23675788 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 18877677 gtgcgggcgcggcggcggcg 18877658
>dbj|AP003140.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0025P13 Length = 133242 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Plus Query: 240 cgtcttcatcgtctaccgcaacgtcatctccctccccctcctcgcccccttcgcctactt 299 |||| |||||| |||||||||| ||||| || | | ||||||||||||||||||||| Sbjct: 96693 cgtcctcatcgcctaccgcaacatcatcgccgccgtcttcctcgcccccttcgcctacta 96752 Query: 300 cctcgaga 307 | |||||| Sbjct: 96753 cttcgaga 96760
>dbj|AP002883.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0487H02 Length = 145491 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Plus Query: 240 cgtcttcatcgtctaccgcaacgtcatctccctccccctcctcgcccccttcgcctactt 299 |||| |||||| |||||||||| ||||| || | | ||||||||||||||||||||| Sbjct: 12519 cgtcctcatcgcctaccgcaacatcatcgccgccgtcttcctcgcccccttcgcctacta 12578 Query: 300 cctcgaga 307 | |||||| Sbjct: 12579 cttcgaga 12586
>dbj|AP003621.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0621D05 Length = 180250 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Minus Query: 239 tcgtcttcatcgtctaccgcaacgtcatctccctccccctcctcgcccccttcgcctact 298 |||||||| |||||||||| || || || ||||| |||||||||||||| ||||| || Sbjct: 176613 tcgtcttctgcgtctaccgcgacctcgtcgccctcgccctcctcgcccccgccgccttct 176554 Query: 299 tcctcgag 306 ||| |||| Sbjct: 176553 tccgcgag 176546
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 48.1 bits (24), Expect = 0.026 Identities = 27/28 (96%) Strand = Plus / Plus Query: 108 tgttggtgcgggcgcggcggcggcgcac 135 |||||||||||||| ||||||||||||| Sbjct: 3743369 tgttggtgcgggcggggcggcggcgcac 3743396 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 269 ccctccccctcctcgcccccttcg 292 ||||| |||||||||||||||||| Sbjct: 1622163 ccctcgccctcctcgcccccttcg 1622140
>dbj|AP003634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0655A07 Length = 172473 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Minus Query: 239 tcgtcttcatcgtctaccgcaacgtcatctccctccccctcctcgcccccttcgcctact 298 |||||||| |||||||||| || || || ||||| |||||||||||||| ||||| || Sbjct: 30238 tcgtcttctgcgtctaccgcgacctcgtcgccctcgccctcctcgcccccgccgccttct 30179 Query: 299 tcctcgag 306 ||| |||| Sbjct: 30178 tccgcgag 30171
>dbj|AK120104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022P08, full insert sequence Length = 1968 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Plus Query: 239 tcgtcttcatcgtctaccgcaacgtcatctccctccccctcctcgcccccttcgcctact 298 |||||||| |||||||||| || || || ||||| |||||||||||||| ||||| || Sbjct: 299 tcgtcttctgcgtctaccgcgacctcgtcgccctcgccctcctcgcccccgccgccttct 358 Query: 299 tcctcgag 306 ||| |||| Sbjct: 359 tccgcgag 366
>dbj|AK067151.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098O11, full insert sequence Length = 2318 Score = 48.1 bits (24), Expect = 0.026 Identities = 57/68 (83%) Strand = Plus / Plus Query: 239 tcgtcttcatcgtctaccgcaacgtcatctccctccccctcctcgcccccttcgcctact 298 |||||||| |||||||||| || || || ||||| |||||||||||||| ||||| || Sbjct: 360 tcgtcttctgcgtctaccgcgacctcgtcgccctcgccctcctcgcccccgccgccttct 419 Query: 299 tcctcgag 306 ||| |||| Sbjct: 420 tccgcgag 427
>gb|AC154831.2| Mus musculus BAC clone RP24-556A11 from chromosome 12, complete sequence Length = 199712 Score = 46.1 bits (23), Expect = 0.10 Identities = 26/27 (96%) Strand = Plus / Plus Query: 264 catctccctccccctcctcgccccctt 290 ||||||| ||||||||||||||||||| Sbjct: 122931 catctccatccccctcctcgccccctt 122957
>gb|BC063255.1| Mus musculus RIKEN cDNA 0610010D24 gene, mRNA (cDNA clone MGC:66781 IMAGE:6408630), complete cds Length = 6608 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 267 ctccctccccctcctcgccccc 288 |||||||||||||||||||||| Sbjct: 83 ctccctccccctcctcgccccc 104
>gb|BC043115.1| Mus musculus RIKEN cDNA 0610010D24 gene, mRNA (cDNA clone MGC:58041 IMAGE:6408630), complete cds Length = 6608 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 267 ctccctccccctcctcgccccc 288 |||||||||||||||||||||| Sbjct: 83 ctccctccccctcctcgccccc 104
>gb|AY339881.1| Mus musculus DVL-binding protein DAPLE mRNA, complete cds Length = 6293 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 267 ctccctccccctcctcgccccc 288 |||||||||||||||||||||| Sbjct: 7 ctccctccccctcctcgccccc 28
>gb|AC131759.3| Mus musculus BAC clone RP24-212D8 from chromosome 12, complete sequence Length = 166128 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 267 ctccctccccctcctcgccccc 288 |||||||||||||||||||||| Sbjct: 70361 ctccctccccctcctcgccccc 70340
>ref|XM_778950.1| PREDICTED: Strongylocentrotus purpuratus similar to Protein CXorf22 (LOC578802), mRNA Length = 4962 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 228 catcagcaagctcgtcttcatc 249 |||||||||||||||||||||| Sbjct: 1774 catcagcaagctcgtcttcatc 1753
>emb|AL663060.6| Mouse DNA sequence from clone RP23-239H6 on chromosome 11, complete sequence Length = 218635 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 33 tgtccattgtttgtttctctgt 54 |||||||||||||||||||||| Sbjct: 19492 tgtccattgtttgtttctctgt 19513
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 166 ctggcgctgcagttcctgctcg 187 |||||||||||||||||||||| Sbjct: 836152 ctggcgctgcagttcctgctcg 836131
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 286 cccttcgcctacttcctcgaga 307 |||||||||||||||||||||| Sbjct: 20314033 cccttcgcctacttcctcgaga 20314012 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 1440792 gtgcgggcgcggcggcggcg 1440773 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 1407636 gtgcgggcgcggcggcggcg 1407617 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 1374485 gtgcgggcgcggcggcggcg 1374466 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 1341332 gtgcgggcgcggcggcggcg 1341313
>dbj|AP005105.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0052O11 Length = 106467 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 286 cccttcgcctacttcctcgaga 307 |||||||||||||||||||||| Sbjct: 56644 cccttcgcctacttcctcgaga 56623
>dbj|AP004573.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0678G09 Length = 139220 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Minus Query: 286 cccttcgcctacttcctcgaga 307 |||||||||||||||||||||| Sbjct: 22933 cccttcgcctacttcctcgaga 22912
>dbj|AK071512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098N15, full insert sequence Length = 1499 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 286 cccttcgcctacttcctcgaga 307 |||||||||||||||||||||| Sbjct: 222 cccttcgcctacttcctcgaga 243
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Minus Query: 318 gccgccgctgaccttgtcgctgctgg 343 ||||||||||||||||| |||||||| Sbjct: 1321349 gccgccgctgaccttgttgctgctgg 1321324 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 acaggccgccgctgaccttg 333 |||||||||||||||||||| Sbjct: 3026038 acaggccgccgctgaccttg 3026057
>ref|NM_026681.3| Mus musculus RIKEN cDNA 0610010D24 gene (0610010D24Rik), mRNA Length = 6293 Score = 44.1 bits (22), Expect = 0.40 Identities = 22/22 (100%) Strand = Plus / Plus Query: 267 ctccctccccctcctcgccccc 288 |||||||||||||||||||||| Sbjct: 7 ctccctccccctcctcgccccc 28
>ref|NM_197602.1| Oryza sativa (japonica cultivar-group) putative glutathione S-transferase (OSJNBb0015I11.25), mRNA Length = 1206 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 123 ggcggcggcgcaccgggagaaggtg 147 |||||||||||||||| |||||||| Sbjct: 612 ggcggcggcgcaccggcagaaggtg 636
>gb|AC135929.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0692D12, complete sequence Length = 164064 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcgcaccg 137 |||||||||||||||||||| |||| Sbjct: 64674 gtgcgggcgcggcggcggcgtaccg 64698
>gb|AC091806.4| Homo sapiens chromosome X clone RP11-320G24 map p11.4, complete sequence Length = 182440 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 ccctccccctcctcgccccct 289 ||||||||||||||||||||| Sbjct: 15003 ccctccccctcctcgccccct 15023
>gb|AC091809.4| Homo sapiens chromosome X clone XXbac-11940 map p11.4, complete sequence Length = 218733 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 ccctccccctcctcgccccct 289 ||||||||||||||||||||| Sbjct: 83928 ccctccccctcctcgccccct 83948
>gb|AC134348.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0530H10, complete sequence Length = 148373 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcgcaccg 137 |||||||||||||||||||| |||| Sbjct: 113906 gtgcgggcgcggcggcggcgtaccg 113930
>ref|XM_542990.2| PREDICTED: Canis familiaris similar to Protein C20orf77 homolog (LOC485866), mRNA Length = 1947 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 ccctccccctcctcgccccct 289 ||||||||||||||||||||| Sbjct: 309 ccctccccctcctcgccccct 329
>gb|AC171181.3| Pan troglodytes BAC clone CH251-214F24 from chromosome unknown, complete sequence Length = 165414 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 ggtgcgggcgcggcggcggcg 132 ||||||||||||||||||||| Sbjct: 45059 ggtgcgggcgcggcggcggcg 45079
>emb|AL353648.27| Human DNA sequence from clone RP11-550P23 on chromosome 13 Contains the HMGB1 gene for high mobility group box 1 (HMG1 HMG3), a novel gene, a novel pseudogene, a microfibrillar-associated protein 1 (MFAP1) pseudogene, a protein tyrosine phosphatase, non-receptor type 2 (PTPN2) pseudogene and a CpG island, complete sequence Length = 133867 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 112 ggtgcgggcgcggcggcggcg 132 ||||||||||||||||||||| Sbjct: 22188 ggtgcgggcgcggcggcggcg 22208
>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16 Length = 348971 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 416 tgtcgccgacctacgcgtccgcgatccag 444 ||||||||||||||||| ||| ||||||| Sbjct: 69289 tgtcgccgacctacgcggccgagatccag 69317
>gb|AE012267.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 175 of 460 of the complete genome Length = 10029 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 gctggcgctgcagttcctgct 185 ||||||||||||||||||||| Sbjct: 266 gctggcgctgcagttcctgct 286
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 262 gtcatctccctccccctcctc 282 ||||||||||||||||||||| Sbjct: 1439611 gtcatctccctccccctcctc 1439631
>gb|AC051633.7| Oryza sativa chromosome 10 BAC OSJNBb0015I11 genomic sequence, complete sequence Length = 138824 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 123 ggcggcggcgcaccgggagaaggtg 147 |||||||||||||||| |||||||| Sbjct: 114469 ggcggcggcgcaccggcagaaggtg 114445
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 gctggcgctgcagttcctgct 185 ||||||||||||||||||||| Sbjct: 3111555 gctggcgctgcagttcctgct 3111535
>gb|AF281043.1|AF281043 Homo sapiens high mobility group 1 protein (HMG1) gene, promoter and partial cds Length = 3662 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 112 ggtgcgggcgcggcggcggcg 132 ||||||||||||||||||||| Sbjct: 2381 ggtgcgggcgcggcggcggcg 2361
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 123 ggcggcggcgcaccgggagaaggtg 147 |||||||||||||||| |||||||| Sbjct: 20713017 ggcggcggcgcaccggcagaaggtg 20712993
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcgcaccg 137 |||||||||||||||||||| |||| Sbjct: 17120539 gtgcgggcgcggcggcggcgtaccg 17120563
>dbj|AB103350.1| Oryza sativa (japonica cultivar-group) GST mRNA for glutathione S-transferase, complete cd Length = 1238 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 123 ggcggcggcgcaccgggagaaggtg 147 |||||||||||||||| |||||||| Sbjct: 612 ggcggcggcgcaccggcagaaggtg 636
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 123 ggcggcggcgcaccgggagaaggtg 147 |||||||||||||||| |||||||| Sbjct: 20724289 ggcggcggcgcaccggcagaaggtg 20724265
>gb|M87885.1|DROHAIRYJ Drosophila basic-helix-loop-helix protein (hairy) mRNA, complete cds Length = 1137 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 tgctggcgctgcagttcctgc 184 ||||||||||||||||||||| Sbjct: 293 tgctggcgctgcagttcctgc 273
>gb|AC113055.9| Mus musculus chromosome 5, clone RP23-251M20, complete sequence Length = 185733 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 266 tctccctccccctcctcgccccct 289 ||||||||||||||||| |||||| Sbjct: 10391 tctccctccccctcctctccccct 10414
>ref|XM_550030.1| Oryza sativa (japonica cultivar-group), mRNA Length = 693 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 212 gtgcgggcgcggcggcggcg 231
>ref|XM_474441.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1239 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 278 tcctcgcccccttcgcctacttcctcgagaagaaggacag 317 |||||||||| ||||||||||| |||||| |||| |||| Sbjct: 164 tcctcgccccgctcgcctacttcgtcgagaggaagaacag 203
>ref|NM_191926.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1602 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 cggcggcggcgcaccgggag 141 |||||||||||||||||||| Sbjct: 446 cggcggcggcgcaccgggag 465
>ref|XM_476478.1| Oryza sativa (japonica cultivar-group), mRNA Length = 948 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 285 gtgcgggcgcggcggcggcg 304
>ref|XM_476470.1| Oryza sativa (japonica cultivar-group), mRNA Length = 738 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 285 gtgcgggcgcggcggcggcg 304
>ref|XM_476462.1| Oryza sativa (japonica cultivar-group), mRNA Length = 738 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 285 gtgcgggcgcggcggcggcg 304
>gb|AC120528.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0014L17 map C996B, complete sequence Length = 78835 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 31338 gtgcgggcgcggcggcggcg 31357
>ref|NM_183000.1| Mus musculus amiloride-sensitive cation channel 3 (Accn3), mRNA Length = 2247 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 tctccctccccctcctcgccccct 289 ||||||||||||||||| |||||| Sbjct: 1070 tctccctccccctcctctccccct 1047
>gb|BC054460.1| Mus musculus amiloride-sensitive cation channel 3, mRNA (cDNA clone MGC:62860 IMAGE:6494526), complete cds Length = 2247 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 tctccctccccctcctcgccccct 289 ||||||||||||||||| |||||| Sbjct: 1070 tctccctccccctcctctccccct 1047
>gb|AF211529.1| Nicotiana tabacum Avr9/Cf-9 rapidly elicited protein 31 (ACRE31) mRNA, complete cds Length = 975 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 agaagatcagtaagaagagt 74 |||||||||||||||||||| Sbjct: 20 agaagatcagtaagaagagt 1
>gb|AC137107.7| Mus musculus chromosome 5, clone RP23-274I21, complete sequence Length = 182588 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tcatgggggtgctggcgctg 174 |||||||||||||||||||| Sbjct: 134231 tcatgggggtgctggcgctg 134212
>gb|AC124113.9| Mus musculus chromosome 5, clone RP24-354P12, complete sequence Length = 156826 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 155 tcatgggggtgctggcgctg 174 |||||||||||||||||||| Sbjct: 153238 tcatgggggtgctggcgctg 153257
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 gcggcggcggcgcaccgggagaag 144 |||||||||||||||||| ||||| Sbjct: 5103708 gcggcggcggcgcaccggcagaag 5103685
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 357 gctggcgctcatcgggatcacggc 380 ||||||||||||||| |||||||| Sbjct: 2013949 gctggcgctcatcggaatcacggc 2013972
>ref|XM_854533.1| PREDICTED: Canis familiaris similar to oxidative-stress responsive 1, transcript variant 3 (LOC607809), mRNA Length = 2225 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 gttggtgcgggcgcggcggcggcg 132 ||||||| |||||||||||||||| Sbjct: 177 gttggtgggggcgcggcggcggcg 200
>ref|XM_844622.1| PREDICTED: Canis familiaris similar to oxidative-stress responsive 1, transcript variant 2 (LOC607809), mRNA Length = 2267 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 109 gttggtgcgggcgcggcggcggcg 132 ||||||| |||||||||||||||| Sbjct: 177 gttggtgggggcgcggcggcggcg 200
>gb|BC085783.1| Rattus norvegicus leucine rich repeat containing 8 family, member D, mRNA (cDNA clone MGC:93739 IMAGE:7107805), complete cds Length = 3213 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tcatgggggtgctggcgctg 174 |||||||||||||||||||| Sbjct: 936 tcatgggggtgctggcgctg 917
>gb|AC122378.4| Mus musculus BAC clone RP23-474C9 from chromosome 15, complete sequence Length = 203662 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 agaagagttgtggagatggggagg 90 |||||||| ||||||||||||||| Sbjct: 114281 agaagagtagtggagatggggagg 114304
>emb|AL731585.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009K15, complete sequence Length = 185021 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 43033 gtgcgggcgcggcggcggcg 43052
>ref|NM_001008338.1| Rattus norvegicus leucine rich repeat containing 8 family, member D (Lrrc8d), mRNA Length = 3213 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tcatgggggtgctggcgctg 174 |||||||||||||||||||| Sbjct: 936 tcatgggggtgctggcgctg 917
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 ggtgctggcgctgcagttcc 181 |||||||||||||||||||| Sbjct: 2013904 ggtgctggcgctgcagttcc 2013885
>emb|AL939124.1|SCO939124 Streptomyces coelicolor A3(2) complete genome; segment 21/29 Length = 308050 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 gcgctcatcgggatcacggc 380 |||||||||||||||||||| Sbjct: 248887 gcgctcatcgggatcacggc 248868
>gb|AC117487.6| Homo sapiens 3 BAC CTD-2017B15 (CalTech Human BAC Library D) complete sequence Length = 56646 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcgggcgcggcggcggcgca 134 |||||||||||||||||||| Sbjct: 6237 gcgggcgcggcggcggcgca 6256
>gb|AC090434.43| Chlamydomonas reinhardtii clone cr-1j6, complete sequence Length = 127686 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 115 gcgggcgcggcggcggcgca 134 |||||||||||||||||||| Sbjct: 13112 gcgggcgcggcggcggcgca 13131
>gb|AE011822.1| Xanthomonas axonopodis pv. citri str. 306, section 200 of 469 of the complete genome Length = 12675 Score = 40.1 bits (20), Expect = 6.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 156 catgggggtgctggcgctgcagttcctg 183 |||||| |||||| |||||||||||||| Sbjct: 405 catgggcgtgctgccgctgcagttcctg 378
>tpg|BK000908.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M312, complete sequence Length = 11198 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 5692 gtgcgggcgcggcggcggcg 5711
>tpg|BK000877.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M271, complete sequence Length = 9866 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 5261 gtgcgggcgcggcggcggcg 5242
>gb|AC116426.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0058P18, from chromosome 3, complete sequence Length = 155037 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 gcggcggcggcgcaccgggagaag 144 |||||||||||||||||| ||||| Sbjct: 65997 gcggcggcggcgcaccggcagaag 66020
>dbj|AK137459.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched library, clone:9830004O20 product:leucine-rich repeat-containing 5, full insert sequence Length = 3906 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tcatgggggtgctggcgctg 174 |||||||||||||||||||| Sbjct: 1197 tcatgggggtgctggcgctg 1178
>gb|AC115687.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0091J11, from chromosome 3, complete sequence Length = 181163 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 121 gcggcggcggcgcaccgggagaag 144 |||||||||||||||||| ||||| Sbjct: 152810 gcggcggcggcgcaccggcagaag 152833
>dbj|AK167985.1| Mus musculus TIB-55 BB88 cDNA, RIKEN full-length enriched library, clone:I730045C14 product:leucine-rich repeat-containing 5, full insert sequence Length = 3148 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tcatgggggtgctggcgctg 174 |||||||||||||||||||| Sbjct: 904 tcatgggggtgctggcgctg 885
>dbj|AK046249.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230361H05 product:hypothetical RNI-like structure containing protein, full insert sequence Length = 3439 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tcatgggggtgctggcgctg 174 |||||||||||||||||||| Sbjct: 1195 tcatgggggtgctggcgctg 1176
>dbj|AK080722.1| Mus musculus adult retina cDNA, RIKEN full-length enriched library, clone:A930019F03 product:hypothetical RNI-like structure containing protein, full insert sequence Length = 3693 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tcatgggggtgctggcgctg 174 |||||||||||||||||||| Sbjct: 1130 tcatgggggtgctggcgctg 1111
>gb|AF319938.1|AF319938 Thermus thermophilus competence factor ComEA (comEA) and competence factor ComEC (comEC) genes, complete cds Length = 2950 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 273 ccccctcctcgcccccttcgcctacttcctcg 304 |||||||||||||||| ||||| || |||||| Sbjct: 1901 ccccctcctcgcccccctcgccaacctcctcg 1932
>dbj|AK050400.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730043O22 product:hypothetical RNI-like structure containing protein, full insert sequence Length = 3749 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tcatgggggtgctggcgctg 174 |||||||||||||||||||| Sbjct: 1156 tcatgggggtgctggcgctg 1137
>tpg|BK000359.1| TPA: TPA_exp: Oryza sativa transposon Rim2-M79 transposase gene, complete cds Length = 14308 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 5637 gtgcgggcgcggcggcggcg 5656
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 11721577 gtgcgggcgcggcggcggcg 11721596 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 6202118 gtgcgggcgcggcggcggcg 6202137
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cgcggcggcggcgcaccggg 139 |||||||||||||||||||| Sbjct: 18961364 cgcggcggcggcgcaccggg 18961383 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ccctcctcgcccccttcgcc 294 |||||||||||||||||||| Sbjct: 10997492 ccctcctcgcccccttcgcc 10997511 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 4130934 gtgcgggcgcggcggcggcg 4130915
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 9891258 gtgcgggcgcggcggcggcg 9891239
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tgcgggcgcggcggcggcgc 133 |||||||||||||||||||| Sbjct: 4845703 tgcgggcgcggcggcggcgc 4845722
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 121 gcggcggcggcgcaccgggagaag 144 |||||||||||||||||| ||||| Sbjct: 5102925 gcggcggcggcgcaccggcagaag 5102902
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 199 atcgtcagccgggcggcgct 218 |||||||||||||||||||| Sbjct: 1561836 atcgtcagccgggcggcgct 1561817
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 gcggcggcggcgcaccggga 140 |||||||||||||||||||| Sbjct: 243818 gcggcggcggcgcaccggga 243837
>dbj|AP005383.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1034_C08 Length = 154441 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 43572 gtgcgggcgcggcggcggcg 43553
>dbj|AP003760.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0063G05 Length = 182681 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 cggcggcggcgcaccgggag 141 |||||||||||||||||||| Sbjct: 65618 cggcggcggcgcaccgggag 65599
>dbj|AK193905.1| Mus musculus cDNA, clone:Y1G0113L11, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000060531, based on BLAT search Length = 120 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tcatgggggtgctggcgctg 174 |||||||||||||||||||| Sbjct: 82 tcatgggggtgctggcgctg 63
>dbj|AK187929.1| Mus musculus cDNA, clone:Y0G0143I07, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000060531, based on BLAT search Length = 215 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tcatgggggtgctggcgctg 174 |||||||||||||||||||| Sbjct: 82 tcatgggggtgctggcgctg 63
>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome Length = 1849742 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 273 ccccctcctcgcccccttcgcctacttcctcg 304 |||||||||||||||| ||||| || |||||| Sbjct: 1843030 ccccctcctcgcccccctcgccaacctcctcg 1843061
>dbj|AP003684.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0485D10 Length = 147464 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 43242 gtgcgggcgcggcggcggcg 43223
>dbj|AP003214.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0083M16 Length = 179428 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 65101 gtgcgggcgcggcggcggcg 65120
>dbj|AP003567.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0022N24 Length = 124062 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 38197 gtgcgggcgcggcggcggcg 38216
>dbj|AP002873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0552C05 Length = 136586 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 114584 gtgcgggcgcggcggcggcg 114603
>dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1012G11 Length = 167168 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 tgcgggcgcggcggcggcgc 133 |||||||||||||||||||| Sbjct: 28235 tgcgggcgcggcggcggcgc 28254
>dbj|AP005446.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0029C06 Length = 156500 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 23845 gtgcgggcgcggcggcggcg 23864
>dbj|AP005309.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474G09 Length = 169511 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 139320 gtgcgggcgcggcggcggcg 139301 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 106167 gtgcgggcgcggcggcggcg 106148
>dbj|AP006451.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:B1249D05 Length = 132526 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 26381 gtgcgggcgcggcggcggcg 26362
>dbj|AP005604.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1212_C12 Length = 147782 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 80977 gtgcgggcgcggcggcggcg 80958 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 47821 gtgcgggcgcggcggcggcg 47802 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 14670 gtgcgggcgcggcggcggcg 14651
>dbj|AP005643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0046O12 Length = 128223 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 85543 gtgcgggcgcggcggcggcg 85562
>dbj|AP005097.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1114E07 Length = 135511 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 103427 gtgcgggcgcggcggcggcg 103408
>dbj|AK107360.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-A04, full insert sequence Length = 1551 Score = 40.1 bits (20), Expect = 6.3 Identities = 35/40 (87%) Strand = Plus / Plus Query: 278 tcctcgcccccttcgcctacttcctcgagaagaaggacag 317 |||||||||| ||||||||||| |||||| |||| |||| Sbjct: 171 tcctcgccccgctcgcctacttcgtcgagaggaagaacag 210
>dbj|AK063261.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-A07, full insert sequence Length = 750 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 93 tcagcagcaggcaggtgttggtgc 116 |||||||||||||||||| ||||| Sbjct: 123 tcagcagcaggcaggtgtcggtgc 146
>gb|AY589156.1| Poa arachnifera clone 1 CDO504 gene, partial sequence Length = 663 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 tcatctccctccccctcctc 282 |||||||||||||||||||| Sbjct: 34 tcatctccctccccctcctc 53
>gb|AF081810.1|AF081810 Lymantria dispar nucleopolyhedrovirus, complete genome Length = 161046 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cgggcgcggcggcggcgcac 135 |||||||||||||||||||| Sbjct: 2839 cgggcgcggcggcggcgcac 2858
>emb|BX629356.1|CNS09SBW Tetraodon nigroviridis BAC sequence Length = 101385 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 108 tgttggtgcgggcgcggcggcggc 131 |||||||| ||||||||||||||| Sbjct: 63869 tgttggtgtgggcgcggcggcggc 63846
>gb|BC037717.1| Mus musculus leucine rich repeat containing 8D, mRNA (cDNA clone MGC:47330 IMAGE:4239389), complete cds Length = 3906 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tcatgggggtgctggcgctg 174 |||||||||||||||||||| Sbjct: 1167 tcatgggggtgctggcgctg 1148
>gb|BC014756.1| Mus musculus leucine rich repeat containing 8D, mRNA (cDNA clone IMAGE:3498186), containing frame-shift errors Length = 2962 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tcatgggggtgctggcgctg 174 |||||||||||||||||||| Sbjct: 220 tcatgggggtgctggcgctg 201
>gb|AC120353.9| Mus musculus chromosome 5, clone RP24-239E2, complete sequence Length = 182659 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 266 tctccctccccctcctcgccccct 289 ||||||||||||||||| |||||| Sbjct: 122380 tctccctccccctcctctccccct 122403
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 9962955 gtgcgggcgcggcggcggcg 9962936
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cgcggcggcggcgcaccggg 139 |||||||||||||||||||| Sbjct: 18887591 cgcggcggcggcgcaccggg 18887610 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 275 ccctcctcgcccccttcgcc 294 |||||||||||||||||||| Sbjct: 10997191 ccctcctcgcccccttcgcc 10997210 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 4130921 gtgcgggcgcggcggcggcg 4130902
>emb|AL831808.4|CNS08CAL Oryza sativa chromosome 12, . BAC OSJNBa0028H02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153064 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 cgcggcggcggcgcaccggg 139 |||||||||||||||||||| Sbjct: 9015 cgcggcggcggcgcaccggg 8996
>emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb0032I14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 134082 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 ccctcctcgcccccttcgcc 294 |||||||||||||||||||| Sbjct: 108083 ccctcctcgcccccttcgcc 108064
>emb|AL928748.4|CNS08CBL Oryza sativa chromosome 12, . BAC OSJNBb0092O07 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 123469 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 73330 gtgcgggcgcggcggcggcg 73311
>emb|AL606997.3|OSJN00115 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0059D20, complete sequence Length = 147108 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 113 gtgcgggcgcggcggcggcg 132 |||||||||||||||||||| Sbjct: 97903 gtgcgggcgcggcggcggcg 97922
>emb|BX255875.3|CNS09S4W Oryza sativa chromosome 12, . BAC OSJNBa0018L16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151203 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cgcggcggcggcgcaccggg 139 |||||||||||||||||||| Sbjct: 57481 cgcggcggcggcgcaccggg 57500
>ref|NM_178701.2| Mus musculus leucine rich repeat containing 8D (Lrrc8d), mRNA Length = 3906 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 155 tcatgggggtgctggcgctg 174 |||||||||||||||||||| Sbjct: 1167 tcatgggggtgctggcgctg 1148
>gb|AE017221.1| Thermus thermophilus HB27, complete genome Length = 1894877 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 273 ccccctcctcgcccccttcgcctacttcctcg 304 |||||||||||||||| ||||| || |||||| Sbjct: 1517875 ccccctcctcgcccccctcgccaacctcctcg 1517906
>gb|U04322.1|LDU04322 Lymantria dispar nuclear polyhedrosis virus 5-6-1 protein kinase gene, complete cds Length = 1248 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 116 cgggcgcggcggcggcgcac 135 |||||||||||||||||||| Sbjct: 39 cgggcgcggcggcggcgcac 58
>emb|AL807790.15| Mouse DNA sequence from clone RP23-471O23 on chromosome 4, complete sequence Length = 179628 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 tcagcagcaggcaggtgttg 112 |||||||||||||||||||| Sbjct: 21173 tcagcagcaggcaggtgttg 21192 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,683,007 Number of Sequences: 3902068 Number of extensions: 4683007 Number of successful extensions: 141824 Number of sequences better than 10.0: 152 Number of HSP's better than 10.0 without gapping: 165 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 136719 Number of HSP's gapped (non-prelim): 5104 length of query: 468 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 446 effective length of database: 17,147,199,772 effective search space: 7647651098312 effective search space used: 7647651098312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
