>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                            
Query: 261      tcgacttcttctgctacagcgccgccgatgtcgcggcagagatcggcatcccgacgtatt 320
                |||||||||||||||||||||||  ||| || |  || ||| || ||||||||||||| |
Sbjct: 30669356 tcgacttcttctgctacagcgccctcgacgttggcgccgagctccgcatcccgacgtact 30669415

                     
Query: 321      tcttc 325
                |||||
Sbjct: 30669416 tcttc 30669420



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                       
Query: 261      tcgacttcttctgctacagcgcc 283
                |||||||||||||||||||||||
Sbjct: 30660368 tcgacttcttctgctacagcgcc 30660390

>dbj|AP003560.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1060H01
          Length = 157987

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                          
Query: 261    tcgacttcttctgctacagcgccgccgatgtcgcggcagagatcggcatcccgacgtatt 320
              |||||||||||||||||||||||  ||| || |  || ||| || ||||||||||||| |
Sbjct: 111633 tcgacttcttctgctacagcgccctcgacgttggcgccgagctccgcatcccgacgtact 111692

                   
Query: 321    tcttc 325
              |||||
Sbjct: 111693 tcttc 111697



 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 261    tcgacttcttctgctacagcgcc 283
              |||||||||||||||||||||||
Sbjct: 102645 tcgacttcttctgctacagcgcc 102667

>dbj|AK108266.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-141-B10, full
           insert sequence
          Length = 1688

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 55/65 (84%)
 Strand = Plus / Plus

                                                                       
Query: 261 tcgacttcttctgctacagcgccgccgatgtcgcggcagagatcggcatcccgacgtatt 320
           |||||||||||||||||||||||  ||| || |  || ||| || ||||||||||||| |
Sbjct: 365 tcgacttcttctgctacagcgccctcgacgttggcgccgagctccgcatcccgacgtact 424

                
Query: 321 tcttc 325
           |||||
Sbjct: 425 tcttc 429

>ref|NM_191562.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1416

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 261 tcgacttcttctgctacagcgcc 283
           |||||||||||||||||||||||
Sbjct: 344 tcgacttcttctgctacagcgcc 366

>dbj|AK106947.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-119-D12, full
           insert sequence
          Length = 1658

 Score = 46.1 bits (23), Expect = 0.098
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 261 tcgacttcttctgctacagcgcc 283
           |||||||||||||||||||||||
Sbjct: 469 tcgacttcttctgctacagcgcc 491

>gb|AC149787.2| Gallus gallus BAC clone TAM31-60B9 from chromosome ul, complete
             sequence
          Length = 146640

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 254   ctcctgctcgacttcttctgct 275
             ||||||||||||||||||||||
Sbjct: 50051 ctcctgctcgacttcttctgct 50072

>ref|XM_616867.2| PREDICTED: Bos taurus similar to Multidrug resistance protein 1
           (P-glycoprotein 1) (LOC536724), mRNA
          Length = 3897

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 263 gacttcttctgctacagcgcc 283
           |||||||||||||||||||||
Sbjct: 714 gacttcttctgctacagcgcc 694

>ref|XM_429609.1| PREDICTED: Gallus gallus LOC418801 (LOC418801), mRNA
          Length = 927

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 256 cctgctcgacttcttctgcta 276
           |||||||||||||||||||||
Sbjct: 640 cctgctcgacttcttctgcta 660

>ref|XM_883499.1| Leishmania major strain Friedlin hypothetical protein (L2969.02)
           partial mRNA
          Length = 1767

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 133 ctgcgcccggcgcgggccatt 153
           |||||||||||||||||||||
Sbjct: 519 ctgcgcccggcgcgggccatt 499

>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end
          Length = 225394

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 133    ctgcgcccggcgcgggccatt 153
              |||||||||||||||||||||
Sbjct: 218180 ctgcgcccggcgcgggccatt 218200

>emb|AL512362.4|CNS07EFB Human chromosome 14 DNA sequence BAC R-716K17 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168744

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 47     ctgcttcccacacccacgtcc 67
              |||||||||||||||||||||
Sbjct: 110162 ctgcttcccacacccacgtcc 110182

>emb|BX927359.1| Human chromosome 14 DNA sequence BAC R-614O9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 173641

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 47    ctgcttcccacacccacgtcc 67
             |||||||||||||||||||||
Sbjct: 70148 ctgcttcccacacccacgtcc 70128

>emb|AL772340.19| Zebrafish DNA sequence from clone CH211-150G2, complete sequence
          Length = 174176

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 19     taaaacaaatctgttactcccaatt 43
              |||||||||| ||||||||||||||
Sbjct: 110628 taaaacaaatgtgttactcccaatt 110652

>gb|AC130283.8| Mus musculus chromosome 15, clone RP23-136E18, complete sequence
          Length = 180660

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   gtatttcttcttcctgggtt 335
             ||||||||||||||||||||
Sbjct: 22989 gtatttcttcttcctgggtt 22970

>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 270     tctgctacagcgccgccgat 289
               ||||||||||||||||||||
Sbjct: 4704809 tctgctacagcgccgccgat 4704790

>gb|BC071150.1| Xenopus laevis hypothetical protein LOC443572, mRNA (cDNA clone
           IMAGE:6317893), partial cds
          Length = 2227

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 355 actgctccacctgcccgtcatcca 378
           ||||||||||||||||||| ||||
Sbjct: 998 actgctccacctgcccgtcttcca 975

>gb|AC125361.4| Mus musculus BAC clone RP23-93M7 from chromosome 12, complete sequence
          Length = 202234

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 44     cctctgcttcccacacccac 63
              ||||||||||||||||||||
Sbjct: 111415 cctctgcttcccacacccac 111434

>gb|AF486581.1| Uncultured bacterium aminoglycoside 3'-N-acetyltransferase gene,
            complete cds
          Length = 38269

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 403  tgacctcggcggcgagcccg 422
            ||||||||||||||||||||
Sbjct: 3959 tgacctcggcggcgagcccg 3940

>gb|AC132844.7| Mus musculus chromosome 17, clone RP24-481P13, complete sequence
          Length = 225183

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 316   gtatttcttcttcctgggtt 335
             ||||||||||||||||||||
Sbjct: 64989 gtatttcttcttcctgggtt 64970

>emb|AL590376.7| Human DNA sequence from clone RP11-22P2 on chromosome Xq23-24, complete
             sequence
          Length = 18024

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    cctagaatgaaagaggcaaa 85
             ||||||||||||||||||||
Sbjct: 10903 cctagaatgaaagaggcaaa 10922

>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 409     cggcggcgagcccgtgaagg 428
               ||||||||||||||||||||
Sbjct: 3918687 cggcggcgagcccgtgaagg 3918668

>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 231     gccggcaacgccaccgttcccgcc 254
               |||||||||||||||| |||||||
Sbjct: 2130011 gccggcaacgccaccgatcccgcc 2129988

>emb|Z83335.1|SPZ83335 S.pneumoniae dexB, cap1[A,B,C,D,E,F,G,H,I,J,K] genes, dTDP-rhamnose
            biosynthesis genes and aliA gene
          Length = 23770

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   tactcccaattcctctgctt 52
            ||||||||||||||||||||
Sbjct: 9737 tactcccaattcctctgctt 9718

>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   ccttgcggtactgctccacc 365
             ||||||||||||||||||||
Sbjct: 18282 ccttgcggtactgctccacc 18301

>gb|AC163282.3| Mus musculus BAC clone RP23-454I20 from chromosome 12, complete
             sequence
          Length = 202583

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 44    cctctgcttcccacacccac 63
             ||||||||||||||||||||
Sbjct: 30867 cctctgcttcccacacccac 30886

>gb|AC097381.3| Homo sapiens BAC clone RP11-338K13 from 4, complete sequence
          Length = 214098

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 44    cctctgcttcccacacccac 63
             ||||||||||||||||||||
Sbjct: 85859 cctctgcttcccacacccac 85840

>dbj|AK045378.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230110N18
            product:unclassifiable, full insert sequence
          Length = 2575

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 44   cctctgcttcccacacccac 63
            ||||||||||||||||||||
Sbjct: 2271 cctctgcttcccacacccac 2290

>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome
          Length = 143461

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 407   ctcggcggcgagcccgtgaaggtg 430
             ||||||||||||||||||| ||||
Sbjct: 36592 ctcggcggcgagcccgtgacggtg 36615

>gb|BC092319.1| Xenopus laevis hypothetical protein LOC443572, mRNA (cDNA clone
           IMAGE:6956967), partial cds
          Length = 2229

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 355 actgctccacctgcccgtcatcca 378
           ||||||||||||||||||| ||||
Sbjct: 983 actgctccacctgcccgtcttcca 960

>gb|AC078845.2|AC078845 Homo sapiens chromosome 7 clone RP11-707A19, complete sequence
          Length = 161514

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   tttcttcttcctgggttgca 338
             ||||||||||||||||||||
Sbjct: 36554 tttcttcttcctgggttgca 36573

>gb|AC154853.2| Mus musculus BAC clone RP23-21C15 from 17, complete sequence
          Length = 170353

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 316    gtatttcttcttcctgggtt 335
              ||||||||||||||||||||
Sbjct: 155167 gtatttcttcttcctgggtt 155148

>emb|CR931632.1| Streptococcus pneumoniae strain 519/43 (serotype 1)
          Length = 22182

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 33   tactcccaattcctctgctt 52
            ||||||||||||||||||||
Sbjct: 9203 tactcccaattcctctgctt 9184

>emb|AJ422133.1|PVI422133 Suid herpesvirus 1 strain Kaplan UL37 (partial), UL36 gene and UL35
            gene (partial)
          Length = 10444

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 407  ctcggcggcgagcccgtgaaggtg 430
            ||||||||||||||||||| ||||
Sbjct: 6192 ctcggcggcgagcccgtgacggtg 6169

>gb|AC140947.1| Gallus gallus BAC clone TAM33-40B24 from chromosome ul, complete sequence
          Length = 229639

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 256    cctgctcgacttcttctgct 275
              ||||||||||||||||||||
Sbjct: 177143 cctgctcgacttcttctgct 177162

>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 350    gcggtactgctccacctgcc 369
              ||||||||||||||||||||
Sbjct: 964445 gcggtactgctccacctgcc 964426


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,370,635
Number of Sequences: 3902068
Number of extensions: 3370635
Number of successful extensions: 58789
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58461
Number of HSP's gapped (non-prelim): 325
length of query: 449
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 427
effective length of database: 17,147,199,772
effective search space: 7321854302644
effective search space used: 7321854302644
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)