ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet63e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_191140.1| Oryza sativa (japonica cultivar-group), predic... 228 1e-56
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 228 1e-56
3dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic D... 228 1e-56
4gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, co... 46 0.10
5emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromos... 46 0.10
6gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, comp... 46 0.10
7gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 46 0.10
8gb|AC124412.3| Mus musculus BAC clone RP24-274J3 from chromosome... 44 0.41
9gb|AC113106.9| Mus musculus chromosome 9, clone RP23-325C1, comp... 44 0.41
10emb|AL355537.11| Human DNA sequence from clone RP11-442O18 on ch... 44 0.41
11gb|CP000135.1| Rhizobium etli CFN 42 plasmid p42b, complete sequ... 44 0.41
12dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 44 0.41
13gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.41
14gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 44 0.41
15dbj|AB081806.1| Streptomyces griseus chi II gene for chitinase I... 44 0.41
16ref|XM_474010.1| Oryza sativa (japonica cultivar-group), predic... 42 1.6
17ref|XM_869198.1| PREDICTED: Bos taurus similar to Erythrocyte ba... 42 1.6
18gb|AC121119.12| Mus musculus chromosome 1, clone RP23-395D10, co... 42 1.6
19gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.6
20gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 42 1.6
21emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4,... 42 1.6
22gb|AF379940.1| Spilomicrus sp. M232 28S ribosomal RNA gene, part... 42 1.6
23dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
24dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
25gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
26dbj|AK121970.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
27emb|AL732333.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 1.6
28dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.6
29emb|AL671765.6| Mouse DNA sequence from clone RP23-100L23 on chr... 42 1.6
30gb|AC111115.13| Mus musculus chromosome 5, clone RP23-213H20, co... 40 6.5
31ref|XM_468436.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
32ref|XM_507056.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 6.5
33gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
34gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
35gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
36ref|XM_583484.2| PREDICTED: Bos taurus similar to CG31320-PA (LO... 40 6.5
37gb|DQ490965.1| Mutant Zea mays clone pGR25C22 disrupted DOF1 (Do... 40 6.5
38gb|AC044804.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 6.5
39gb|AF130250.1| Wautersia eutropha hypothetical protein (macR') g... 40 6.5
40gb|BC020007.1| Mus musculus ubiquitin specific peptdiase 1, mRNA... 40 6.5
41gb|BC018179.1| Mus musculus ubiquitin specific peptdiase 1, mRNA... 40 6.5
42gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide comple... 40 6.5
43gb|BC092574.1| Rattus norvegicus ubiquitin specific peptdiase 1,... 40 6.5
44ref|NM_001015015.1| Rattus norvegicus ubiquitin specific peptdia... 40 6.5
45gb|AC127173.17| Mus musculus strain C57BL/6J clone rp23-39k4 map... 40 6.5
46gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 40 6.5
47gb|AY301066.1| Transposition vector RescueMu, complete sequence 40 6.5
48emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.5
49emb|BX640423.1| Bordetella parapertussis strain 12822, complete ... 40 6.5
50emb|BX640412.1| Bordetella pertussis strain Tohama I, complete g... 40 6.5
51emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete ... 40 6.5
52emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete ... 40 6.5
53emb|Y00603.1|ZMTNMU17 Zea mays transposable element Mu1.7 40 6.5
54emb|X13019.1|ZMTNMU14 Maize Mu-homologous element Mu1.4.-B37 40 6.5
55emb|X00913.1|ZMTEMU1 Maize transposable element Mu1 sequence 40 6.5
56gb|AF347696.1| Zea mays NADPH-dependent reductase (a1) gene, a1-... 40 6.5
57gb|AC108080.2| Homo sapiens chromosome 5 clone CTC-315N8, comple... 40 6.5
58gb|AC011404.6| Homo sapiens chromosome 5 clone CTB-43P18, comple... 40 6.5
59emb|AJ580352.1|PSP580352 Paracoccus sp. BOG6 partial 16S rRNA ge... 40 6.5
60emb|AJ532552.1|LTE532552 Lolium temulentum partial inv1:2 gene f... 40 6.5
61gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 40 6.5
62gb|AC159299.2| Mus musculus BAC clone RP23-241K11 from chromosom... 40 6.5
63gb|AC157517.2| Mus musculus BAC clone RP24-69C11 from chromosome... 40 6.5
64dbj|AK080882.1| Mus musculus 4 days neonate male adipose cDNA, R... 40 6.5
65gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 6.5
66gb|AC159326.9| Mus musculus 10 BAC RP23-451H6 (Roswell Park Canc... 40 6.5
67emb|AL110735.1|CNS018S8 Botrytis cinerea strain T4 cDNA library 40 6.5
68dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
69dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
70dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
71dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
72dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
73gb|AC021631.6|AC021631 Mus musculus, clone RP23-38J11, complete ... 40 6.5
74gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome 40 6.5
75gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Can... 40 6.5
76dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
77dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
78emb|BX649611.8| Mouse DNA sequence from clone RP23-445E3 on chro... 40 6.5
79dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
80dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
81emb|AL807391.10| Mouse DNA sequence from clone RP23-432D24 on ch... 40 6.5
82dbj|AP004193.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
83dbj|AK103441.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
84emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.5
85gb|AC144813.3| Mus musculus BAC clone RP24-324I23 from 9, comple... 40 6.5
86dbj|AK064187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
87emb|X54992.1|ZMTRELMU1 Z.mays transposable element Mu1 40 6.5
88gb|AC140241.3| Mus musculus BAC clone RP23-283I15 from chromosom... 40 6.5
89gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 6.5
90gb|AF006498.1|AF006498 Zea mays discolored-1 (mutant allele dsc1... 40 6.5
91gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.5
92ref|NM_146144.2| Mus musculus ubiquitin specific peptdiase 1 (Us... 40 6.5
93dbj|AP006135.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 6.5
94emb|AL731814.13| Mouse DNA sequence from clone RP23-109J20 on ch... 40 6.5
95gb|AC163715.5| Mus musculus BAC clone RP23-367H6 from chromosome... 40 6.5
96gb|M22076.1|MZETNMUT Maize Mu transposable element MRS-A 40 6.5
97emb|AL627349.8| Mouse DNA sequence from clone RP23-329P19 on chr... 40 6.5 
>ref|NM_191140.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1578

 Score =  228 bits (115), Expect = 1e-56
 Identities = 136/143 (95%)
 Strand = Plus / Plus

                                                                       
Query: 52  atggacccctgcgccttcgtccgcctcaccgtggaccagctcctcctcaagctccccgcc 111
           |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 238 atggacccctgcgcgttcgtccgcctcaccgtggaccagctcctcctcaagctgccctcc 297

                                                                       
Query: 112 gtgccgcgccccagctccggcgccgccggcgtgcacccctccacctccccctgcttctgc 171
           ||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 298 gtgccgcgcccgagctccggcgccgccggcgtccacccttccacctccccatgcttctgc 357

                                  
Query: 172 acgctccacctccaggaccaccc 194
           |||||||||||||||||||||||
Sbjct: 358 acgctccacctccaggaccaccc 380



 Score =  149 bits (75), Expect = 1e-32
 Identities = 182/215 (84%), Gaps = 12/215 (5%)
 Strand = Plus / Plus

                                                                       
Query: 268 cccgtcgtgatcagcctcgacgtcgccgccgtgcagaggctctcgggccgccccgccg-- 325
           ||||| ||||| |||||||||| |||||| ||||||||||||||||  ||||||||||  
Sbjct: 460 cccgtggtgataagcctcgacgccgccgcggtgcagaggctctcggcgcgccccgccgcc 519

                                                                       
Query: 326 -agctcgtcgtgaccgtgcacgcgggccagtccaaggggagcacgagcaccggctgcggc 384
            ||||||||||| |||||||||| || |||   |||||||  |||    |||||||||||
Sbjct: 520 gagctcgtcgtgtccgtgcacgccgggcag---aagggga--acg----ccggctgcggc 570

                                                                       
Query: 385 gtgggcgccagccgcgccctcgggaaggtgcgcgtggccgtcgacgtggcgcgcgccgcc 444
            || ||||| ||||||| || || | |||||| ||| |||||||||||||||||||||| 
Sbjct: 571 atgagcgccggccgcgcgctgggcagggtgcgggtgcccgtcgacgtggcgcgcgccgcg 630

                                              
Query: 445 gccggggagaccgtggtggcgcgcgacgggtgggt 479
           |||||||||||||| || |||||||||||||||||
Sbjct: 631 gccggggagaccgtcgtcgcgcgcgacgggtgggt 665
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  228 bits (115), Expect = 1e-56
 Identities = 136/143 (95%)
 Strand = Plus / Plus

                                                                            
Query: 52       atggacccctgcgccttcgtccgcctcaccgtggaccagctcctcctcaagctccccgcc 111
                |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 30911416 atggacccctgcgcgttcgtccgcctcaccgtggaccagctcctcctcaagctgccctcc 30911475

                                                                            
Query: 112      gtgccgcgccccagctccggcgccgccggcgtgcacccctccacctccccctgcttctgc 171
                ||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 30911476 gtgccgcgcccgagctccggcgccgccggcgtccacccttccacctccccatgcttctgc 30911535

                                       
Query: 172      acgctccacctccaggaccaccc 194
                |||||||||||||||||||||||
Sbjct: 30911536 acgctccacctccaggaccaccc 30911558



 Score =  149 bits (75), Expect = 1e-32
 Identities = 182/215 (84%), Gaps = 12/215 (5%)
 Strand = Plus / Plus

                                                                            
Query: 268      cccgtcgtgatcagcctcgacgtcgccgccgtgcagaggctctcgggccgccccgccg-- 325
                ||||| ||||| |||||||||| |||||| ||||||||||||||||  ||||||||||  
Sbjct: 30911638 cccgtggtgataagcctcgacgccgccgcggtgcagaggctctcggcgcgccccgccgcc 30911697

                                                                            
Query: 326      -agctcgtcgtgaccgtgcacgcgggccagtccaaggggagcacgagcaccggctgcggc 384
                 ||||||||||| |||||||||| || |||   |||||||  |||    |||||||||||
Sbjct: 30911698 gagctcgtcgtgtccgtgcacgccgggcag---aagggga--acg----ccggctgcggc 30911748

                                                                            
Query: 385      gtgggcgccagccgcgccctcgggaaggtgcgcgtggccgtcgacgtggcgcgcgccgcc 444
                 || ||||| ||||||| || || | |||||| ||| |||||||||||||||||||||| 
Sbjct: 30911749 atgagcgccggccgcgcgctgggcagggtgcgggtgcccgtcgacgtggcgcgcgccgcg 30911808

                                                   
Query: 445      gccggggagaccgtggtggcgcgcgacgggtgggt 479
                |||||||||||||| || |||||||||||||||||
Sbjct: 30911809 gccggggagaccgtcgtcgcgcgcgacgggtgggt 30911843
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>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0638D12
          Length = 161277

 Score =  228 bits (115), Expect = 1e-56
 Identities = 136/143 (95%)
 Strand = Plus / Plus

                                                                          
Query: 52     atggacccctgcgccttcgtccgcctcaccgtggaccagctcctcctcaagctccccgcc 111
              |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 111783 atggacccctgcgcgttcgtccgcctcaccgtggaccagctcctcctcaagctgccctcc 111842

                                                                          
Query: 112    gtgccgcgccccagctccggcgccgccggcgtgcacccctccacctccccctgcttctgc 171
              ||||||||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 111843 gtgccgcgcccgagctccggcgccgccggcgtccacccttccacctccccatgcttctgc 111902

                                     
Query: 172    acgctccacctccaggaccaccc 194
              |||||||||||||||||||||||
Sbjct: 111903 acgctccacctccaggaccaccc 111925



 Score =  149 bits (75), Expect = 1e-32
 Identities = 182/215 (84%), Gaps = 12/215 (5%)
 Strand = Plus / Plus

                                                                          
Query: 268    cccgtcgtgatcagcctcgacgtcgccgccgtgcagaggctctcgggccgccccgccg-- 325
              ||||| ||||| |||||||||| |||||| ||||||||||||||||  ||||||||||  
Sbjct: 112005 cccgtggtgataagcctcgacgccgccgcggtgcagaggctctcggcgcgccccgccgcc 112064

                                                                          
Query: 326    -agctcgtcgtgaccgtgcacgcgggccagtccaaggggagcacgagcaccggctgcggc 384
               ||||||||||| |||||||||| || |||   |||||||  |||    |||||||||||
Sbjct: 112065 gagctcgtcgtgtccgtgcacgccgggcag---aagggga--acg----ccggctgcggc 112115

                                                                          
Query: 385    gtgggcgccagccgcgccctcgggaaggtgcgcgtggccgtcgacgtggcgcgcgccgcc 444
               || ||||| ||||||| || || | |||||| ||| |||||||||||||||||||||| 
Sbjct: 112116 atgagcgccggccgcgcgctgggcagggtgcgggtgcccgtcgacgtggcgcgcgccgcg 112175

                                                 
Query: 445    gccggggagaccgtggtggcgcgcgacgggtgggt 479
              |||||||||||||| || |||||||||||||||||
Sbjct: 112176 gccggggagaccgtcgtcgcgcgcgacgggtgggt 112210
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>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence
          Length = 3181762

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 426     cgacgtggcgcgcgccgccgccg 448
               |||||||||||||||||||||||
Sbjct: 1713631 cgacgtggcgcgcgccgccgccg 1713653



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 129     cggcgccgccggcgtgcacc 148
               ||||||||||||||||||||
Sbjct: 1139706 cggcgccgccggcgtgcacc 1139725
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>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence
          Length = 3173005

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 426     cgacgtggcgcgcgccgccgccg 448
               |||||||||||||||||||||||
Sbjct: 3048483 cgacgtggcgcgcgccgccgccg 3048505



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 129     cggcgccgccggcgtgcacc 148
               ||||||||||||||||||||
Sbjct: 2455620 cggcgccgccggcgtgcacc 2455639
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>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence
          Length = 2325379

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 426     cgacgtggcgcgcgccgccgccg 448
               |||||||||||||||||||||||
Sbjct: 2197125 cgacgtggcgcgcgccgccgccg 2197147



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 129    cggcgccgccggcgtgcacc 148
              ||||||||||||||||||||
Sbjct: 278849 cggcgccgccggcgtgcacc 278830
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 426     cgacgtggcgcgcgccgccgccg 448
               |||||||||||||||||||||||
Sbjct: 2815910 cgacgtggcgcgcgccgccgccg 2815932
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>gb|AC124412.3| Mus musculus BAC clone RP24-274J3 from chromosome 9, complete sequence
          Length = 175945

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 189   ccacccttcctccctctcccgc 210
             ||||||||||||||||||||||
Sbjct: 75878 ccacccttcctccctctcccgc 75857
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>gb|AC113106.9| Mus musculus chromosome 9, clone RP23-325C1, complete sequence
          Length = 191609

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 189    ccacccttcctccctctcccgc 210
              ||||||||||||||||||||||
Sbjct: 150287 ccacccttcctccctctcccgc 150266
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>emb|AL355537.11| Human DNA sequence from clone RP11-442O18 on chromosome 10 Contains
             three novel genes, complete sequence
          Length = 188728

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 149   cctccacctccccctgcttctg 170
             ||||||||||||||||||||||
Sbjct: 58485 cctccacctccccctgcttctg 58506
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>gb|CP000135.1| Rhizobium etli CFN 42 plasmid p42b, complete sequence
          Length = 184338

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 256   ggcggcggcgaccccgtcgtga 277
             ||||||||||||||||||||||
Sbjct: 61380 ggcggcggcgaccccgtcgtga 61401
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 420     ggccgtcgacgtggcgcgcgccgccgccggggag 453
               |||||||||| | |||||||||||||||| ||||
Sbjct: 4822055 ggccgtcgacctcgcgcgcgccgccgccgaggag 4822022
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 114     gccgcgccccagctccggcgccgccg 139
               |||||||||||||||||||| |||||
Sbjct: 4961478 gccgcgccccagctccggcggcgccg 4961503



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 438     cgccgccgccggggagaccgt 458
               |||||||||||||||||||||
Sbjct: 1985835 cgccgccgccggggagaccgt 1985815



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 128     ccggcgccgccggcgtgcac 147
               ||||||||||||||||||||
Sbjct: 3399493 ccggcgccgccggcgtgcac 3399512



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 432     ggcgcgcgccgccgccgggg 451
               ||||||||||||||||||||
Sbjct: 2403297 ggcgcgcgccgccgccgggg 2403278



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 430     gtggcgcgcgccgccgccggggag 453
               ||||||||||| ||||||||||||
Sbjct: 1804062 gtggcgcgcgcggccgccggggag 1804085
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                                 
Query: 318     ccccgccgagctcgtcgtgaccgtgcacgcgggc 351
               |||||||||||||||||| |||| || |||||||
Sbjct: 1442702 ccccgccgagctcgtcgtcaccgcgcgcgcgggc 1442669
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>dbj|AB081806.1| Streptomyces griseus chi II gene for chitinase II, partial cds
          Length = 2299

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 258 cggcggcgaccccgtcgtgatc 279
           ||||||||||||||||||||||
Sbjct: 771 cggcggcgaccccgtcgtgatc 792
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>ref|XM_474010.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 387

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 437 gcgccgccgccggggagaccg 457
           |||||||||||||||||||||
Sbjct: 101 gcgccgccgccggggagaccg 121
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>ref|XM_869198.1| PREDICTED: Bos taurus similar to Erythrocyte band 7 integral
           membrane protein (Stomatin) (Protein 7.2b) (LOC617026),
           partial mRNA
          Length = 2473

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 140 gcgtgcacccctccacctccc 160
           |||||||||||||||||||||
Sbjct: 758 gcgtgcacccctccacctccc 738
to top
>gb|AC121119.12| Mus musculus chromosome 1, clone RP23-395D10, complete sequence
          Length = 221436

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 147    cccctccacctccccctgctt 167
              |||||||||||||||||||||
Sbjct: 113687 cccctccacctccccctgctt 113707
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 105    ccccgccgtgccgcgccccagctccggcg 133
              |||||||||||||| ||||| ||||||||
Sbjct: 778490 ccccgccgtgccgccccccacctccggcg 778462
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 427     gacgtggcgcgcgccgccgcc 447
               |||||||||||||||||||||
Sbjct: 3491426 gacgtggcgcgcgccgccgcc 3491406
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>emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L09,
             complete sequence
          Length = 159502

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 437   gcgccgccgccggggagaccg 457
             |||||||||||||||||||||
Sbjct: 39098 gcgccgccgccggggagaccg 39078
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>gb|AF379940.1| Spilomicrus sp. M232 28S ribosomal RNA gene, partial sequence
          Length = 461

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 127 tccggcgccgccggcgtgcac 147
           |||||||||||||||||||||
Sbjct: 131 tccggcgccgccggcgtgcac 151
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 437      gcgccgccgccggggagaccg 457
                |||||||||||||||||||||
Sbjct: 32269515 gcgccgccgccggggagaccg 32269495
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
              complete sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 105    ccccgccgtgccgcgccccagctccggcg 133
              |||||||||||||| ||||| ||||||||
Sbjct: 778488 ccccgccgtgccgccccccacctccggcg 778460
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>gb|AC134237.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0090O10, complete sequence
          Length = 162132

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 105   ccccgccgtgccgcgccccagctccggcg 133
             |||||||||||||| ||||| ||||||||
Sbjct: 74035 ccccgccgtgccgccccccacctccggcg 74007
to top
>dbj|AK121970.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108H17, full
           insert sequence
          Length = 2902

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 105 ccccgccgtgccgcgccccagctccggcg 133
           |||||||||||||| ||||| ||||||||
Sbjct: 112 ccccgccgtgccgccccccacctccggcg 84
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>emb|AL732333.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0613A10, complete
             sequence
          Length = 77572

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 437   gcgccgccgccggggagaccg 457
             |||||||||||||||||||||
Sbjct: 35488 gcgccgccgccggggagaccg 35468
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 417     cgtggccgtcgacgtggcgcg 437
               |||||||||||||||||||||
Sbjct: 2235913 cgtggccgtcgacgtggcgcg 2235893



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 417     cgtggccgtcgacgtggcgcg 437
               |||||||||||||||||||||
Sbjct: 2235833 cgtggccgtcgacgtggcgcg 2235813
to top
>emb|AL671765.6| Mouse DNA sequence from clone RP23-100L23 on chromosome X, complete
             sequence
          Length = 191093

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 147   cccctccacctccccctgctt 167
             |||||||||||||||||||||
Sbjct: 16894 cccctccacctccccctgctt 16914
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>gb|AC111115.13| Mus musculus chromosome 5, clone RP23-213H20, complete sequence
          Length = 201694

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 183    ccaggaccacccttcctccc 202
              ||||||||||||||||||||
Sbjct: 139619 ccaggaccacccttcctccc 139638
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>ref|XM_468436.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 931

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 cgacgtcgccgccgtgcaga 304
           ||||||||||||||||||||
Sbjct: 642 cgacgtcgccgccgtgcaga 661
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>ref|XM_507056.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1202_E07.33
           mRNA
          Length = 1002

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 cgacgtcgccgccgtgcaga 304
           ||||||||||||||||||||
Sbjct: 649 cgacgtcgccgccgtgcaga 668
to top
>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01,
             complete sequence
          Length = 173074

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 240   cctcccttccggggccggcggcgg 263
             |||||||||| |||||||||||||
Sbjct: 17572 cctcccttcccgggccggcggcgg 17595
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>gb|AC145324.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026D03 map near S2137, complete sequence
          Length = 115141

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   cacccttcctccctctcccg 209
             ||||||||||||||||||||
Sbjct: 54179 cacccttcctccctctcccg 54160
to top
>gb|AC134933.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0579A05,
             complete sequence
          Length = 107407

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 240   cctcccttccggggccggcggcgg 263
             |||||||||| |||||||||||||
Sbjct: 79417 cctcccttcccgggccggcggcgg 79440
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>ref|XM_583484.2| PREDICTED: Bos taurus similar to CG31320-PA (LOC506957), mRNA
          Length = 3018

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 407 ggaaggtgcgcgtggccgtc 426
           ||||||||||||||||||||
Sbjct: 194 ggaaggtgcgcgtggccgtc 213
to top
>gb|DQ490965.1| Mutant Zea mays clone pGR25C22 disrupted DOF1 (Dof1) gene, promoter
            region and complete cds
          Length = 12502

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  tccggggccggcggcggcga 266
            ||||||||||||||||||||
Sbjct: 8323 tccggggccggcggcggcga 8342



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  tccggggccggcggcggcga 266
            ||||||||||||||||||||
Sbjct: 4560 tccggggccggcggcggcga 4579
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>gb|AC044804.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-15K8, complete
             sequence
          Length = 253000

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   ggaccacccttcctccctct 205
             ||||||||||||||||||||
Sbjct: 96599 ggaccacccttcctccctct 96580
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>gb|AF130250.1| Wautersia eutropha hypothetical protein (macR') gene, partial cds;
           hypothetical protein (macB), maleylacetate reductase
           (macA), and hypothetical proteins genes, complete cds;
           and hypothetical protein gene, partial cds
          Length = 5861

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 423 cgtcgacgtggcgcgcgccg 442
           ||||||||||||||||||||
Sbjct: 709 cgtcgacgtggcgcgcgccg 690
to top
>gb|BC020007.1| Mus musculus ubiquitin specific peptdiase 1, mRNA (cDNA clone
           MGC:25559 IMAGE:3980469), complete cds
          Length = 3437

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 437 gcgccgccgccggggagacc 456
           ||||||||||||||||||||
Sbjct: 240 gcgccgccgccggggagacc 221
to top
>gb|BC018179.1| Mus musculus ubiquitin specific peptdiase 1, mRNA (cDNA clone
           MGC:25528 IMAGE:3585191), complete cds
          Length = 3465

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 437 gcgccgccgccggggagacc 456
           ||||||||||||||||||||
Sbjct: 287 gcgccgccgccggggagacc 268
to top
>gb|AY310323.1| Streptomyces sp. FR-008 heptaene macrolide complex synthesis gene
             cluster, complete sequence
          Length = 138203

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcgtccgcctcaccgtggac 87
             ||||||||||||||||||||
Sbjct: 92208 tcgtccgcctcaccgtggac 92189
to top
>gb|BC092574.1| Rattus norvegicus ubiquitin specific peptdiase 1, mRNA (cDNA clone
           MGC:108773 IMAGE:7113947), complete cds
          Length = 3563

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 437 gcgccgccgccggggagacc 456
           ||||||||||||||||||||
Sbjct: 354 gcgccgccgccggggagacc 335
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>ref|NM_001015015.1| Rattus norvegicus ubiquitin specific peptdiase 1 (Usp1), mRNA
          Length = 3563

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 437 gcgccgccgccggggagacc 456
           ||||||||||||||||||||
Sbjct: 354 gcgccgccgccggggagacc 335
to top
>gb|AC127173.17| Mus musculus strain C57BL/6J clone rp23-39k4 map 10, complete sequence
          Length = 228883

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    ccacccttcctccctctccc 208
              ||||||||||||||||||||
Sbjct: 150757 ccacccttcctccctctccc 150776
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 436     cgcgccgccgccggggagaccgtg 459
               |||||||||||||||||| |||||
Sbjct: 1806887 cgcgccgccgccggggagcccgtg 1806910
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>gb|AY301066.1| Transposition vector RescueMu, complete sequence
          Length = 4739

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  tccggggccggcggcggcga 266
            ||||||||||||||||||||
Sbjct: 4287 tccggggccggcggcggcga 4268



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 tccggggccggcggcggcga 266
           ||||||||||||||||||||
Sbjct: 524 tccggggccggcggcggcga 505
to top
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16
          Length = 347356

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 374    ccggctgcggcgtgggcgccagcc 397
              |||||||||||| |||||||||||
Sbjct: 295108 ccggctgcggcgcgggcgccagcc 295085
to top
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14
          Length = 348251

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 374    ccggctgcggcgtgggcgccagcc 397
              |||||||||||| |||||||||||
Sbjct: 299761 ccggctgcggcgcgggcgccagcc 299738
to top
>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 374    ccggctgcggcgtgggcgccagcc 397
              |||||||||||| |||||||||||
Sbjct: 260081 ccggctgcggcgcgggcgccagcc 260058
to top
>emb|AL939131.1|SCO939131 Streptomyces coelicolor A3(2) complete genome; segment 28/29
          Length = 303550

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    cggcggcggcgaccccgtcg 274
              ||||||||||||||||||||
Sbjct: 248779 cggcggcggcgaccccgtcg 248798
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>emb|AL939108.1|SCO939108 Streptomyces coelicolor A3(2) complete genome; segment 5/29
          Length = 339650

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 370    agcaccggctgcggcgtggg 389
              ||||||||||||||||||||
Sbjct: 106143 agcaccggctgcggcgtggg 106162
to top
>emb|Y00603.1|ZMTNMU17 Zea mays transposable element Mu1.7
          Length = 1754

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 tccggggccggcggcggcga 266
           ||||||||||||||||||||
Sbjct: 917 tccggggccggcggcggcga 898



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 tccggggccggcggcggcga 266
           ||||||||||||||||||||
Sbjct: 516 tccggggccggcggcggcga 497
to top
>emb|X13019.1|ZMTNMU14 Maize Mu-homologous element Mu1.4.-B37
          Length = 1396

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 tccggggccggcggcggcga 266
           ||||||||||||||||||||
Sbjct: 935 tccggggccggcggcggcga 916



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 tccggggccggcggcggcga 266
           ||||||||||||||||||||
Sbjct: 533 tccggggccggcggcggcga 514
to top
>emb|X00913.1|ZMTEMU1 Maize transposable element Mu1 sequence
          Length = 1400

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 tccggggccggcggcggcga 266
           ||||||||||||||||||||
Sbjct: 937 tccggggccggcggcggcga 918



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 tccggggccggcggcggcga 266
           ||||||||||||||||||||
Sbjct: 535 tccggggccggcggcggcga 516
to top
>gb|AF347696.1| Zea mays NADPH-dependent reductase (a1) gene, a1-mum2 allele,
            complete cds
          Length = 8154

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  tccggggccggcggcggcga 266
            ||||||||||||||||||||
Sbjct: 4818 tccggggccggcggcggcga 4837



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 247  tccggggccggcggcggcga 266
            ||||||||||||||||||||
Sbjct: 4416 tccggggccggcggcggcga 4435
to top
>gb|AC108080.2| Homo sapiens chromosome 5 clone CTC-315N8, complete sequence
          Length = 160494

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   ctgcacgctccacctccagg 187
             ||||||||||||||||||||
Sbjct: 67673 ctgcacgctccacctccagg 67692
to top
>gb|AC011404.6| Homo sapiens chromosome 5 clone CTB-43P18, complete sequence
          Length = 123931

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 168   ctgcacgctccacctccagg 187
             ||||||||||||||||||||
Sbjct: 99221 ctgcacgctccacctccagg 99240
to top
>emb|AJ580352.1|PSP580352 Paracoccus sp. BOG6 partial 16S rRNA gene, isolate BOG6
          Length = 1385

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 233  ccgcctgcctcccttccggg 252
            ||||||||||||||||||||
Sbjct: 1361 ccgcctgcctcccttccggg 1342
to top
>emb|AJ532552.1|LTE532552 Lolium temulentum partial inv1:2 gene for putative soluble acid
           invertase, exons 1-3
          Length = 1381

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 415 cgcgtggccgtcgacgtggc 434
           ||||||||||||||||||||
Sbjct: 210 cgcgtggccgtcgacgtggc 229
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 256     ggcggcggcgaccccgtcgtgatc 279
               ||||||||||||| ||||||||||
Sbjct: 2548402 ggcggcggcgaccgcgtcgtgatc 2548379
to top
>gb|AC159299.2| Mus musculus BAC clone RP23-241K11 from chromosome 6, complete sequence
          Length = 207837

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 186   ggaccacccttcctccctct 205
             ||||||||||||||||||||
Sbjct: 59473 ggaccacccttcctccctct 59454
to top
>gb|AC157517.2| Mus musculus BAC clone RP24-69C11 from chromosome 9, complete
            sequence
          Length = 189253

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 147  cccctccacctccccctgct 166
            ||||||||||||||||||||
Sbjct: 4105 cccctccacctccccctgct 4086
to top
>dbj|AK080882.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length
           enriched library, clone:B430116N19
           product:UBIQUITIN-SPECIFIC PROTEASE homolog [Homo
           sapiens], full insert sequence
          Length = 3568

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 437 gcgccgccgccggggagacc 456
           ||||||||||||||||||||
Sbjct: 408 gcgccgccgccggggagacc 389
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 248    ccggggccggcggcggcgac 267
              ||||||||||||||||||||
Sbjct: 643083 ccggggccggcggcggcgac 643064
to top
>gb|AC159326.9| Mus musculus 10 BAC RP23-451H6 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 230689

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 189   ccacccttcctccctctccc 208
             ||||||||||||||||||||
Sbjct: 55278 ccacccttcctccctctccc 55297
to top
>emb|AL110735.1|CNS018S8 Botrytis cinerea strain T4 cDNA library
          Length = 1020

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 145 cacccctccacctccccctgcttc 168
           ||||||||||||||||||| ||||
Sbjct: 586 cacccctccacctccccctccttc 609
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 190     cacccttcctccctctcccg 209
               ||||||||||||||||||||
Sbjct: 8278221 cacccttcctccctctcccg 8278240
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 122      ccagctccggcgccgccggc 141
                ||||||||||||||||||||
Sbjct: 18674292 ccagctccggcgccgccggc 18674311
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 306     gctctcgggccgccccgccgagctcgtc 333
               |||| |||||| ||||||||||||||||
Sbjct: 6714847 gctcccgggcctccccgccgagctcgtc 6714820
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 240      cctcccttccggggccggcggcgg 263
                |||||||||| |||||||||||||
Sbjct: 20345827 cctcccttcccgggccggcggcgg 20345850
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 285      cgacgtcgccgccgtgcaga 304
                ||||||||||||||||||||
Sbjct: 35246349 cgacgtcgccgccgtgcaga 35246330
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>gb|AC021631.6|AC021631 Mus musculus, clone RP23-38J11, complete sequence
          Length = 160618

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 147   cccctccacctccccctgcttctg 170
             ||||||| ||||||||||||||||
Sbjct: 51322 cccctccccctccccctgcttctg 51299
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>gb|AE017282.2| Methylococcus capsulatus str. Bath, complete genome
          Length = 3304561

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 284     tcgacgtcgccgccgtgcag 303
               ||||||||||||||||||||
Sbjct: 2030898 tcgacgtcgccgccgtgcag 2030917
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>gb|AC073895.22| Homo sapiens 3 BAC RP11-622L21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167311

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 142   gtgcacccctccacctccccctgcttct 169
             |||||||||||| ||||||||| |||||
Sbjct: 88378 gtgcacccctccccctccccctccttct 88351
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>dbj|AP003569.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0425F05
          Length = 162858

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 306    gctctcgggccgccccgccgagctcgtc 333
              |||| |||||| ||||||||||||||||
Sbjct: 148973 gctcccgggcctccccgccgagctcgtc 148946
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>dbj|AP003509.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0525F01
          Length = 151668

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 306   gctctcgggccgccccgccgagctcgtc 333
             |||| |||||| ||||||||||||||||
Sbjct: 44526 gctcccgggcctccccgccgagctcgtc 44499
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>emb|BX649611.8| Mouse DNA sequence from clone RP23-445E3 on chromosome 4, complete
            sequence
          Length = 41425

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  ccagtccaaggggagcacga 370
            ||||||||||||||||||||
Sbjct: 9515 ccagtccaaggggagcacga 9534
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>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0474F11
          Length = 139544

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 285   cgacgtcgccgccgtgcaga 304
             ||||||||||||||||||||
Sbjct: 58399 cgacgtcgccgccgtgcaga 58380
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>dbj|AP004048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1202_E07
          Length = 145014

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 285    cgacgtcgccgccgtgcaga 304
              ||||||||||||||||||||
Sbjct: 141705 cgacgtcgccgccgtgcaga 141686
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>emb|AL807391.10| Mouse DNA sequence from clone RP23-432D24 on chromosome X, complete
             sequence
          Length = 111019

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   cccctccacctccccctgct 166
             ||||||||||||||||||||
Sbjct: 51006 cccctccacctccccctgct 51025
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>dbj|AP004193.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1756_G07
          Length = 149457

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    ccagctccggcgccgccggc 141
              ||||||||||||||||||||
Sbjct: 101562 ccagctccggcgccgccggc 101581
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>dbj|AK103441.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129D12, full
           insert sequence
          Length = 930

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 cgacgtcgccgccgtgcaga 304
           ||||||||||||||||||||
Sbjct: 641 cgacgtcgccgccgtgcaga 660
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 411     ggtgcgcgtggccgtcgacg 430
               ||||||||||||||||||||
Sbjct: 3317087 ggtgcgcgtggccgtcgacg 3317106
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>gb|AC144813.3| Mus musculus BAC clone RP24-324I23 from 9, complete sequence
          Length = 146104

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   cccctccacctccccctgct 166
             ||||||||||||||||||||
Sbjct: 16465 cccctccacctccccctgct 16484
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>dbj|AK064187.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-104-C02, full
           insert sequence
          Length = 1002

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 285 cgacgtcgccgccgtgcaga 304
           ||||||||||||||||||||
Sbjct: 649 cgacgtcgccgccgtgcaga 668
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>emb|X54992.1|ZMTRELMU1 Z.mays transposable element Mu1
          Length = 576

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 tccggggccggcggcggcga 266
           ||||||||||||||||||||
Sbjct: 513 tccggggccggcggcggcga 494



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 tccggggccggcggcggcga 266
           ||||||||||||||||||||
Sbjct: 111 tccggggccggcggcggcga 92
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>gb|AC140241.3| Mus musculus BAC clone RP23-283I15 from chromosome 17, complete
             sequence
          Length = 158575

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   cccctccacctccccctgct 166
             ||||||||||||||||||||
Sbjct: 24885 cccctccacctccccctgct 24866
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 248     ccggggccggcggcggcgaccccg 271
               ||||| ||||||||||||||||||
Sbjct: 1814118 ccgggtccggcggcggcgaccccg 1814095
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>gb|AF006498.1|AF006498 Zea mays discolored-1 (mutant allele dsc1-Ref::Mu1) gene, partial
            sequence
          Length = 3808

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  tccggggccggcggcggcga 266
            ||||||||||||||||||||
Sbjct: 1408 tccggggccggcggcggcga 1389



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  tccggggccggcggcggcga 266
            ||||||||||||||||||||
Sbjct: 1006 tccggggccggcggcggcga 987
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 190     cacccttcctccctctcccg 209
               ||||||||||||||||||||
Sbjct: 8348984 cacccttcctccctctcccg 8349003
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>ref|NM_146144.2| Mus musculus ubiquitin specific peptdiase 1 (Usp1), mRNA
          Length = 3568

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 437 gcgccgccgccggggagacc 456
           ||||||||||||||||||||
Sbjct: 408 gcgccgccgccggggagacc 389
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>dbj|AP006135.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT30O01, TM0233,
             complete sequence
          Length = 126062

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 145   cacccctccacctccccctgcttctgca 172
             ||||| ||| ||||||||||||||||||
Sbjct: 66006 cacccttcctcctccccctgcttctgca 66033
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>emb|AL731814.13| Mouse DNA sequence from clone RP23-109J20 on chromosome 2, complete
             sequence
          Length = 210821

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   cccctccacctccccctgct 166
             ||||||||||||||||||||
Sbjct: 50744 cccctccacctccccctgct 50725
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>gb|AC163715.5| Mus musculus BAC clone RP23-367H6 from chromosome 17, complete sequence
          Length = 208781

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 147   cccctccacctccccctgct 166
             ||||||||||||||||||||
Sbjct: 54415 cccctccacctccccctgct 54396
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>gb|M22076.1|MZETNMUT Maize Mu transposable element MRS-A
          Length = 1557

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 247 tccggggccggcggcggcga 266
           ||||||||||||||||||||
Sbjct: 723 tccggggccggcggcggcga 704
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>emb|AL627349.8| Mouse DNA sequence from clone RP23-329P19 on chromosome 4, complete
             sequence
          Length = 107898

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 437   gcgccgccgccggggagacc 456
             ||||||||||||||||||||
Sbjct: 60369 gcgccgccgccggggagacc 60350


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,981,192
Number of Sequences: 3902068
Number of extensions: 4981192
Number of successful extensions: 142302
Number of sequences better than 10.0: 97
Number of HSP's better than 10.0 without gapping: 97
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 135581
Number of HSP's gapped (non-prelim): 6718
length of query: 479
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 457
effective length of database: 17,147,199,772
effective search space: 7836270295804
effective search space used: 7836270295804
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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