ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet63d10 |
|---|---|
| Clone Library Name | barley_pub |
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 632 bits (319), Expect = e-178 Identities = 319/319 (100%) Strand = Plus / Plus Query: 1 ctctctatatatatctctctgtctccctctcattcattcatttttatggcagttgagggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3469417 ctctctatatatatctctctgtctccctctcattcattcatttttatggcagttgagggg 3469476 Query: 61 aatgttgtctggtccgagacctaacaccgggcggaatggcggattcagctgcagctaagc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3469477 aatgttgtctggtccgagacctaacaccgggcggaatggcggattcagctgcagctaagc 3469536 Query: 121 aagctaggtggggggtttcggaccaggcttcattccccccaactcaactgtttagttctt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3469537 aagctaggtggggggtttcggaccaggcttcattccccccaactcaactgtttagttctt 3469596 Query: 181 cggcttcggcacaaatcggcgggcgacactgccagcgtgaagcttctgcaggtaggacga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3469597 cggcttcggcacaaatcggcgggcgacactgccagcgtgaagcttctgcaggtaggacga 3469656 Query: 241 tgtttggccgtgcagccagccgtccgtgctccatccaccatcaccatgcatcgatatata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3469657 tgtttggccgtgcagccagccgtccgtgctccatccaccatcaccatgcatcgatatata 3469716 Query: 301 tcttccatctcgctcactg 319 ||||||||||||||||||| Sbjct: 3469717 tcttccatctcgctcactg 3469735 Score = 176 bits (89), Expect = 4e-41 Identities = 89/89 (100%) Strand = Plus / Plus Query: 319 gaggtctggtaactaagcaaagcacacatgttactcacttgagggaagccccgacaccca 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3473596 gaggtctggtaactaagcaaagcacacatgttactcacttgagggaagccccgacaccca 3473655 Query: 379 accataaattcgccagtctgaggaaagaa 407 ||||||||||||||||||||||||||||| Sbjct: 3473656 accataaattcgccagtctgaggaaagaa 3473684 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 137 ttcggaccaggcttcattcccc 158 |||||||||||||||||||||| Sbjct: 30100359 ttcggaccaggcttcattcccc 30100338
>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12, complete sequence Length = 103330 Score = 632 bits (319), Expect = e-178 Identities = 319/319 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctctgtctccctctcattcattcatttttatggcagttgagggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40958 ctctctatatatatctctctgtctccctctcattcattcatttttatggcagttgagggg 40899 Query: 61 aatgttgtctggtccgagacctaacaccgggcggaatggcggattcagctgcagctaagc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40898 aatgttgtctggtccgagacctaacaccgggcggaatggcggattcagctgcagctaagc 40839 Query: 121 aagctaggtggggggtttcggaccaggcttcattccccccaactcaactgtttagttctt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40838 aagctaggtggggggtttcggaccaggcttcattccccccaactcaactgtttagttctt 40779 Query: 181 cggcttcggcacaaatcggcgggcgacactgccagcgtgaagcttctgcaggtaggacga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40778 cggcttcggcacaaatcggcgggcgacactgccagcgtgaagcttctgcaggtaggacga 40719 Query: 241 tgtttggccgtgcagccagccgtccgtgctccatccaccatcaccatgcatcgatatata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 40718 tgtttggccgtgcagccagccgtccgtgctccatccaccatcaccatgcatcgatatata 40659 Query: 301 tcttccatctcgctcactg 319 ||||||||||||||||||| Sbjct: 40658 tcttccatctcgctcactg 40640 Score = 176 bits (89), Expect = 4e-41 Identities = 89/89 (100%) Strand = Plus / Minus Query: 319 gaggtctggtaactaagcaaagcacacatgttactcacttgagggaagccccgacaccca 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 36779 gaggtctggtaactaagcaaagcacacatgttactcacttgagggaagccccgacaccca 36720 Query: 379 accataaattcgccagtctgaggaaagaa 407 ||||||||||||||||||||||||||||| Sbjct: 36719 accataaattcgccagtctgaggaaagaa 36691
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 632 bits (319), Expect = e-178 Identities = 319/319 (100%) Strand = Plus / Plus Query: 1 ctctctatatatatctctctgtctccctctcattcattcatttttatggcagttgagggg 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3469528 ctctctatatatatctctctgtctccctctcattcattcatttttatggcagttgagggg 3469587 Query: 61 aatgttgtctggtccgagacctaacaccgggcggaatggcggattcagctgcagctaagc 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3469588 aatgttgtctggtccgagacctaacaccgggcggaatggcggattcagctgcagctaagc 3469647 Query: 121 aagctaggtggggggtttcggaccaggcttcattccccccaactcaactgtttagttctt 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3469648 aagctaggtggggggtttcggaccaggcttcattccccccaactcaactgtttagttctt 3469707 Query: 181 cggcttcggcacaaatcggcgggcgacactgccagcgtgaagcttctgcaggtaggacga 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3469708 cggcttcggcacaaatcggcgggcgacactgccagcgtgaagcttctgcaggtaggacga 3469767 Query: 241 tgtttggccgtgcagccagccgtccgtgctccatccaccatcaccatgcatcgatatata 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3469768 tgtttggccgtgcagccagccgtccgtgctccatccaccatcaccatgcatcgatatata 3469827 Query: 301 tcttccatctcgctcactg 319 ||||||||||||||||||| Sbjct: 3469828 tcttccatctcgctcactg 3469846 Score = 176 bits (89), Expect = 4e-41 Identities = 89/89 (100%) Strand = Plus / Plus Query: 319 gaggtctggtaactaagcaaagcacacatgttactcacttgagggaagccccgacaccca 378 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3473707 gaggtctggtaactaagcaaagcacacatgttactcacttgagggaagccccgacaccca 3473766 Query: 379 accataaattcgccagtctgaggaaagaa 407 ||||||||||||||||||||||||||||| Sbjct: 3473767 accataaattcgccagtctgaggaaagaa 3473795 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 137 ttcggaccaggcttcattcccc 158 |||||||||||||||||||||| Sbjct: 30191781 ttcggaccaggcttcattcccc 30191760
>emb|AJ872261.1| Festuca glaucescens x Lolium multiflorum microsatellite DNA, clone B4-D9 Length = 676 Score = 65.9 bits (33), Expect = 1e-07 Identities = 36/37 (97%) Strand = Plus / Minus Query: 134 ggtttcggaccaggcttcattccccccaactcaactg 170 |||||||||||||||||||| |||||||||||||||| Sbjct: 86 ggtttcggaccaggcttcatcccccccaactcaactg 50 Score = 46.1 bits (23), Expect = 0.088 Identities = 35/39 (89%) Strand = Plus / Minus Query: 45 tatggcagttgaggggaatgttgtctggtccgagaccta 83 |||||||||||||||| ||||||||||| |||||||| Sbjct: 171 tatggcagttgaggggtgtgttgtctggttggagaccta 133
>emb|AL162491.10| Human DNA sequence from clone RP11-103D20 on chromosome 13 Contains a CpG island, complete sequence Length = 79374 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Minus Query: 2 tctctatatatatctctctgtctccctctc 31 |||||||||||||||||||||||| ||||| Sbjct: 5726 tctctatatatatctctctgtctctctctc 5697
>emb|AL590346.1|ATT2K12 Arabidopsis thaliana DNA chromosome 5, BAC clone T2K12 (ESSA project) Length = 82896 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattccccccaac 163 |||||||||||||||||||||||||| Sbjct: 42163 tcggaccaggcttcattccccccaac 42188 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattccccc 159 |||||||||||||||||||||| Sbjct: 40192 tcggaccaggcttcattccccc 40213
>gb|AC005819.3| Arabidopsis thaliana chromosome 2 clone T3A4 map CIC06C03, complete sequence Length = 55870 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 137 ttcggaccaggcttcattccccccaa 162 |||||||||||||||||||||||||| Sbjct: 30803 ttcggaccaggcttcattccccccaa 30828
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence Length = 317137 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Minus Query: 138 tcggaccaggcttcattccccccaac 163 |||||||||||||||||||||||||| Sbjct: 238519 tcggaccaggcttcattccccccaac 238494
>gb|AY599420.1| Nicotiana sylvestris microRNA MIR166a gene, complete sequence Length = 521 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattccccccaa 162 ||||||||||||||||||||||||| Sbjct: 162 tcggaccaggcttcattccccccaa 186
>gb|AY501431.1| Zea mays microRNA 166a gene, complete sequence Length = 589 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattccccccaa 162 ||||||||||||||||||||||||| Sbjct: 189 tcggaccaggcttcattccccccaa 213
>gb|AY551230.1| Oryza sativa precursor microRNA 166h gene, complete sequence Length = 220 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattccccccaa 162 ||||||||||||||||||||||||| Sbjct: 176 tcggaccaggcttcattccccccaa 200 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ttgaggggaatgttgtctgg 72 |||||||||||||||||||| Sbjct: 24 ttgaggggaatgttgtctgg 43
>gb|AC144592.26| Medicago truncatula clone mth2-23m13, complete sequence Length = 139267 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 138 tcggaccaggcttcattccccccaa 162 ||||||||||||||||||||||||| Sbjct: 52630 tcggaccaggcttcattccccccaa 52606 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttgaggggaatgttgtctgg 72 |||||||||||||||||||| Sbjct: 52710 ttgaggggaatgttgtctgg 52691
>emb|AL138642.1|ATF21F14 Arabidopsis thaliana DNA chromosome 3, BAC clone F21F14 Length = 142001 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattccccccaa 162 ||||||||||||||||||||||||| Sbjct: 84973 tcggaccaggcttcattccccccaa 84997
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 138 tcggaccaggcttcattccccccaa 162 ||||||||||||||||||||||||| Sbjct: 29811221 tcggaccaggcttcattccccccaa 29811197 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttgaggggaatgttgtctgg 72 |||||||||||||||||||| Sbjct: 29811373 ttgaggggaatgttgtctgg 29811354
>dbj|AP004678.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1136_F03 Length = 110783 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 138 tcggaccaggcttcattccccccaa 162 ||||||||||||||||||||||||| Sbjct: 109351 tcggaccaggcttcattccccccaa 109327 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttgaggggaatgttgtctgg 72 |||||||||||||||||||| Sbjct: 109503 ttgaggggaatgttgtctgg 109484
>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0481E08 Length = 171965 Score = 50.1 bits (25), Expect = 0.006 Identities = 25/25 (100%) Strand = Plus / Minus Query: 138 tcggaccaggcttcattccccccaa 162 ||||||||||||||||||||||||| Sbjct: 6734 tcggaccaggcttcattccccccaa 6710 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttgaggggaatgttgtctgg 72 |||||||||||||||||||| Sbjct: 6886 ttgaggggaatgttgtctgg 6867
>gb|AC118747.5| Mus musculus chromosome 5, clone RP24-194J1, complete sequence Length = 166351 Score = 48.1 bits (24), Expect = 0.022 Identities = 30/32 (93%) Strand = Plus / Plus Query: 14 tctctctgtctccctctcattcattcattttt 45 |||||||||||| |||||||| |||||||||| Sbjct: 114756 tctctctgtctctctctcatttattcattttt 114787
>gb|AC140029.19| Medicago truncatula clone mth2-20g24, complete sequence Length = 124043 Score = 48.1 bits (24), Expect = 0.022 Identities = 24/24 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccccca 161 |||||||||||||||||||||||| Sbjct: 70560 tcggaccaggcttcattcccccca 70583 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 137 ttcggaccaggcttcattcccc 158 |||||||||||||||||||||| Sbjct: 70351 ttcggaccaggcttcattcccc 70372
>gb|AC159002.2| Mus musculus BAC clone RP23-203D7 from chromosome 14, complete sequence Length = 181842 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Minus Query: 1 ctctctatatatatctctctgtctccctctc 31 |||||||||||||| ||||| |||||||||| Sbjct: 139715 ctctctatatatatatctctctctccctctc 139685
>gb|AC101205.7| Mus musculus chromosome 14, clone RP23-178N17, complete sequence Length = 236164 Score = 46.1 bits (23), Expect = 0.088 Identities = 29/31 (93%) Strand = Plus / Plus Query: 1 ctctctatatatatctctctgtctccctctc 31 |||||||||||||| ||||| |||||||||| Sbjct: 231883 ctctctatatatatatctctctctccctctc 231913
>gb|AC023628.3|AC023628 Arabidopsis thaliana chromosome I BAC F6F3 genomic sequence, complete sequence Length = 104001 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 50 cagttgaggggaatgttgtctgg 72 ||||||||||||||||||||||| Sbjct: 19947 cagttgaggggaatgttgtctgg 19925 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 138 tcggaccaggcttcattccccccaac 163 |||||||||||||||| ||||||||| Sbjct: 19860 tcggaccaggcttcatcccccccaac 19835
>dbj|AB016875.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9D7 Length = 60476 Score = 46.1 bits (23), Expect = 0.088 Identities = 26/27 (96%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattccccccaact 164 ||||||||||||||||||||| ||||| Sbjct: 40286 tcggaccaggcttcattcccctcaact 40312
>gb|AC007323.5|AC007323 Genomic sequence for Arabidopsis thaliana BAC T25K16 from chromosome I, complete sequence Length = 86436 Score = 46.1 bits (23), Expect = 0.088 Identities = 23/23 (100%) Strand = Plus / Minus Query: 50 cagttgaggggaatgttgtctgg 72 ||||||||||||||||||||||| Sbjct: 78741 cagttgaggggaatgttgtctgg 78719 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 138 tcggaccaggcttcattccccccaac 163 |||||||||||||||| ||||||||| Sbjct: 78654 tcggaccaggcttcatcccccccaac 78629
>ref|XM_469668.1| Oryza sativa (japonica cultivar-group), mRNA Length = 276 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 137 ttcggaccaggcttcattcccc 158 |||||||||||||||||||||| Sbjct: 57 ttcggaccaggcttcattcccc 78
>gb|AC027660.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone BAC nbxb0045B21, complete sequence Length = 152397 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 138 tcggaccaggcttcattccccccaac 163 ||||||||||||||||||||| |||| Sbjct: 136643 tcggaccaggcttcattcccctcaac 136618
>gb|AY551229.1| Oryza sativa precursor microRNA 166g gene, complete sequence Length = 100 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 137 ttcggaccaggcttcattcccc 158 |||||||||||||||||||||| Sbjct: 63 ttcggaccaggcttcattcccc 84
>gb|AC096855.5| Oryza sativa chromosome 3 BAC OJ1365_D05 genomic sequence, complete sequence Length = 163972 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 137 ttcggaccaggcttcattcccc 158 |||||||||||||||||||||| Sbjct: 123536 ttcggaccaggcttcattcccc 123557
>gb|AC148487.14| Medicago truncatula clone mth2-57f20, complete sequence Length = 119671 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattccccc 159 |||||||||||||||||||||| Sbjct: 34737 tcggaccaggcttcattccccc 34758
>emb|AL109614.28|HSBA425M5 Human DNA sequence from clone RP11-425M5 on chromosome 20 Contains the GLRXP gene for glutaredoxin (thioltransferase) pseudogene, the PPIAP3 gene for peptidylprolyl isomerase A (cyclophilin A) pseudogene 3, the NNAT gene for neuronatin, the BLCAP gene for bladder cancer 10 kD protein BC10, a novel gene and three CpG islands, complete sequence Length = 194433 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 tctccctctcattcattcattt 43 |||||||||||||||||||||| Sbjct: 54551 tctccctctcattcattcattt 54530
>gb|AC117988.3| Oryza sativa chromosome 3 BAC OSJNBa0057G07 genomic sequence, complete sequence Length = 155106 Score = 44.1 bits (22), Expect = 0.35 Identities = 22/22 (100%) Strand = Plus / Plus Query: 137 ttcggaccaggcttcattcccc 158 |||||||||||||||||||||| Sbjct: 7392 ttcggaccaggcttcattcccc 7413
>gb|AC165428.1| Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox cluster, cholinesterase, and COLP5alpha genes, complete sequence Length = 796348 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 6 tatatatatctctctgtctccctctc 31 ||||||||||||||| |||||||||| Sbjct: 288231 tatatatatctctctctctccctctc 288206
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 138 tcggaccaggcttcattccccccaac 163 ||||||||||||||||||||| |||| Sbjct: 13968017 tcggaccaggcttcattcccctcaac 13967992 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 19468090 tcggaccaggcttcattcccc 19468110 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 8355755 ctctctatatatatctctct 8355774
>gb|AC097347.6| Homo sapiens X BAC RP11-1M18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160325 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 1 ctctctatatatatctctctgtctcc 26 |||||||||||||||||||| ||||| Sbjct: 101921 ctctctatatatatctctctatctcc 101946
>emb|BX324200.5| Mouse DNA sequence from clone RP23-382H2 on chromosome 2, complete sequence Length = 180530 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 1 ctctctatatatatctctctgtctcc 26 |||||||||||||||| ||||||||| Sbjct: 171993 ctctctatatatatctttctgtctcc 171968
>dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK5 Length = 89779 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattccccccaac 163 ||||||||||||||||||||| |||| Sbjct: 58009 tcggaccaggcttcattcccctcaac 58034
>emb|BX511198.8| Mouse DNA sequence from clone RP23-390P10 on chromosome 4, complete sequence Length = 183261 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 14 tctctctgtctccctctcattcattc 39 |||||||||||| ||||||||||||| Sbjct: 51924 tctctctgtctctctctcattcattc 51899
>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence Length = 366120 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 138 tcggaccaggcttcattccccccaac 163 ||||||||||||||||||| |||||| Sbjct: 307203 tcggaccaggcttcattcctcccaac 307178
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 44.1 bits (22), Expect = 0.35 Identities = 25/26 (96%) Strand = Plus / Minus Query: 138 tcggaccaggcttcattccccccaac 163 ||||||||||||||||||||| |||| Sbjct: 13975359 tcggaccaggcttcattcccctcaac 13975334 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 19479366 tcggaccaggcttcattcccc 19479386 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 8360854 ctctctatatatatctctct 8360873
>gb|AC140303.3| Mus musculus BAC clone RP23-381H21 from chromosome 3, complete sequence Length = 192020 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 29 ctcattcattcatttttatgg 49 ||||||||||||||||||||| Sbjct: 152477 ctcattcattcatttttatgg 152497
>gb|AY501434.1| Zea mays microRNA 166d precursor, transcript, partial sequence Length = 294 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 5 tcggaccaggcttcattcccc 25
>gb|AY501433.1| Zea mays microRNA 166c precursor, transcript, partial sequence Length = 300 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 5 tcggaccaggcttcattcccc 25
>gb|AY501432.1| Zea mays microRNA 166b gene, complete sequence Length = 391 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 99 tcggaccaggcttcattcccc 119
>gb|AC148472.1| Pan troglodytes fosmid clone CH1251-124C12 from Y, complete sequence Length = 33310 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 tatatctctctgtctccctct 30 ||||||||||||||||||||| Sbjct: 25532 tatatctctctgtctccctct 25512
>gb|AC124411.5| Mus musculus BAC clone RP24-267C20 from chromosome 13, complete sequence Length = 177414 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 ctctctatatatatctctctgtctc 25 |||||||||||| |||||||||||| Sbjct: 106087 ctctctatatatgtctctctgtctc 106063
>emb|BX927114.16| Zebrafish DNA sequence from clone DKEY-1C7 in linkage group 1, complete sequence Length = 170755 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 24 tccctctcattcattcatttt 44 ||||||||||||||||||||| Sbjct: 80148 tccctctcattcattcatttt 80128
>gb|AC118755.7| Homo sapiens chromosome 17, clone RP11-55L4, complete sequence Length = 188765 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 14 tctctctgtctccctctcattcattcatt 42 ||||||| |||| |||||||||||||||| Sbjct: 132648 tctctctctctctctctcattcattcatt 132620
>gb|AC139045.7| Mus musculus chromosome 7, clone RP23-466H15, complete sequence Length = 186309 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 atatctctctgtctccctctc 31 ||||||||||||||||||||| Sbjct: 70746 atatctctctgtctccctctc 70726
>emb|AL008629.9|HS197O17 Human DNA sequence from clone RP1-197O17 on chromosome Xq25-26.3 Contains a pseudogene similar to part of SMT3 suppressor of mif two 3 (yeast), the 5' end of gene LOC286467 and a myofibrillogenesis regulator 1 (MR-1) (FKSG19) pseudogene, complete sequence Length = 161812 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 tcattcattcatttttatggc 50 ||||||||||||||||||||| Sbjct: 7880 tcattcattcatttttatggc 7860
>gb|AC165146.3| Mus musculus BAC clone RP24-378G3 from chromosome 14, complete sequence Length = 153934 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 1 ctctctatatatatctctctgtctccctc 29 |||||||||||||| ||||| |||||||| Sbjct: 57764 ctctctatatatatatctctctctccctc 57792
>emb|CR381673.7| Zebrafish DNA sequence from clone CH211-209J3 in linkage group 2, complete sequence Length = 209097 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 tctctctgtctccctctcattcattcatt 42 ||||||| |||| |||||||||||||||| Sbjct: 62306 tctctctctctctctctcattcattcatt 62334
>emb|BX322643.8| Zebrafish DNA sequence from clone CH211-281E1 in linkage group 21, complete sequence Length = 153972 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 tctctctgtctccctctcattcattcatt 42 ||||||| |||| |||||||||||||||| Sbjct: 64205 tctctctctctctctctcattcattcatt 64233
>dbj|BS000631.2| Pan troglodytes chromosome Y clone: PTB-395F06, complete sequence Length = 123227 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 tatatctctctgtctccctct 30 ||||||||||||||||||||| Sbjct: 118619 tatatctctctgtctccctct 118599
>dbj|BS000652.2| Pan troglodytes chromosome Y clone: PTBY-013L08, complete sequence Length = 134024 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 10 tatatctctctgtctccctct 30 ||||||||||||||||||||| Sbjct: 110634 tatatctctctgtctccctct 110614
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 10 tatatctctctgtctccctct 30 ||||||||||||||||||||| Sbjct: 16734611 tatatctctctgtctccctct 16734631
>emb|AJ493649.1|ATH493649 Arabidopsis thaliana microRNA MIR166g Length = 21 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>emb|AJ493648.1|ATH493648 Arabidopsis thaliana microRNA MIR166f Length = 21 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>emb|AJ493647.1|ATH493647 Arabidopsis thaliana microRNA MIR166e Length = 21 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>emb|AJ493646.1|ATH493646 Arabidopsis thaliana microRNA MIR166d Length = 21 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>emb|AJ493645.1|ATH493645 Arabidopsis thaliana microRNA MIR166c Length = 21 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>emb|AJ493644.1|ATH493644 Arabidopsis thaliana microRNA MIR166b Length = 21 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>emb|AJ493643.1|ATH493643 Arabidopsis thaliana microRNA MIR166a Length = 21 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 1 tcggaccaggcttcattcccc 21
>gb|AC061997.12| Homo sapiens chromosome 11, clone RP11-324K6, complete sequence Length = 106216 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 7 atatatatctctctgtctccctctc 31 |||| |||||||||||||||||||| Sbjct: 82188 atatttatctctctgtctccctctc 82212
>gb|AC079383.17| Homo sapiens Xp BAC RP11-30A20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 151276 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 tctccctctcattcattcatt 42 ||||||||||||||||||||| Sbjct: 33381 tctccctctcattcattcatt 33361
>gb|AC025296.10| Oryza sativa chromosome 10 BAC OSJNBa0076F20 genomic sequence, complete sequence Length = 165394 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 95956 tcggaccaggcttcattcccc 95976
>gb|AC159282.2| Mus musculus BAC clone RP23-329M17 from chromosome 12, complete sequence Length = 210571 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 22 tctccctctcattcattcatt 42 ||||||||||||||||||||| Sbjct: 96861 tctccctctcattcattcatt 96881
>gb|AC008539.6| Homo sapiens chromosome 5 clone CTC-493L21, complete sequence Length = 138633 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 30 tcattcattcatttttatggc 50 ||||||||||||||||||||| Sbjct: 42233 tcattcattcatttttatggc 42253
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 26148642 tcggaccaggcttcattcccc 26148662 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ttgaggggaatgttgtctgg 72 |||||||||||||||||||| Sbjct: 26148566 ttgaggggaatgttgtctgg 26148585
>gb|AC018445.21| Homo sapiens chromosome 18, clone RP11-196B3, complete sequence Length = 162265 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 ctctctatatatatctctctgtctc 25 |||||||||||||||||||| |||| Sbjct: 26540 ctctctatatatatctctctatctc 26516
>gb|AC087501.16| Homo sapiens chromosome 17, clone RP11-565F19, complete sequence Length = 192197 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 14 tctctctgtctccctctcattcattcatt 42 ||||||| |||| |||||||||||||||| Sbjct: 106735 tctctctctctctctctcattcattcatt 106707
>emb|BX649268.11| Zebrafish DNA sequence from clone DKEY-106J22 in linkage group 21, complete sequence Length = 172409 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 tctctctgtctccctctcattcattcatt 42 ||||||| |||| |||||||||||||||| Sbjct: 169540 tctctctctctctctctcattcattcatt 169568
>gb|AC157893.2| Medicago truncatula chromosome 7 BAC clone mth2-7m13, complete sequence Length = 140479 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 7 atatatatctctctgtctccctctc 31 |||||||||||||| |||||||||| Sbjct: 138067 atatatatctctctctctccctctc 138091
>dbj|AP004868.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0048B08 Length = 146874 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 45469 tcggaccaggcttcattcccc 45489 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ttgaggggaatgttgtctgg 72 |||||||||||||||||||| Sbjct: 45393 ttgaggggaatgttgtctgg 45412
>dbj|AP004839.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519A12 Length = 156676 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 156088 tcggaccaggcttcattcccc 156108 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ttgaggggaatgttgtctgg 72 |||||||||||||||||||| Sbjct: 156012 ttgaggggaatgttgtctgg 156031
>dbj|BS000085.1| Pan troglodytes chromosome 22 clone:RP43-164H01, map 22, complete sequences Length = 171357 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 attcattcatttttatggcag 52 ||||||||||||||||||||| Sbjct: 25669 attcattcatttttatggcag 25649
>dbj|BS000084.1| Pan troglodytes chromosome 22 clone:RP43-100I03, map 22, complete sequences Length = 154178 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 attcattcatttttatggcag 52 ||||||||||||||||||||| Sbjct: 118414 attcattcatttttatggcag 118394
>dbj|AB016871.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K16L22 Length = 79109 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 tcggaccaggcttcattcccc 158 ||||||||||||||||||||| Sbjct: 76886 tcggaccaggcttcattcccc 76866 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttgaggggaatgttgtctgg 72 |||||||||||||||||||| Sbjct: 77004 ttgaggggaatgttgtctgg 76985
>gb|AC009731.6|AC009731 Homo sapiens 12 BAC RP11-438N16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 172749 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 tctccctctcattcattcatt 42 ||||||||||||||||||||| Sbjct: 53070 tctccctctcattcattcatt 53050
>gb|AC120378.7| Mus musculus chromosome 7, clone RP24-263N3, complete sequence Length = 143396 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 atatctctctgtctccctctc 31 ||||||||||||||||||||| Sbjct: 97485 atatctctctgtctccctctc 97465
>dbj|AP001686.1| Homo sapiens genomic DNA, chromosome 21q, section 30/105 Length = 340000 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 attcattcatttttatggcag 52 ||||||||||||||||||||| Sbjct: 105708 attcattcatttttatggcag 105688
>emb|AL645470.20| Mouse DNA sequence from clone RP23-392H19 on chromosome 11, complete sequence Length = 198031 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 tctctctgtctccctctcattcattcatt 42 ||||||| |||| |||||||||||||||| Sbjct: 77682 tctctctctctctctctcattcattcatt 77710
>gb|AC140679.4| Mus musculus BAC clone RP24-511M8 from 1, complete sequence Length = 176052 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 tctctctgtctccctctcattcattcatt 42 ||||||| |||| |||||||||||||||| Sbjct: 33129 tctctctctctctctctcattcattcatt 33157
>gb|AC140461.4| Mus musculus BAC clone RP23-11M24 from 1, complete sequence Length = 202209 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 14 tctctctgtctccctctcattcattcatt 42 ||||||| |||| |||||||||||||||| Sbjct: 195189 tctctctctctctctctcattcattcatt 195217
>gb|AC124490.4| Mus musculus BAC clone RP23-453I1 from 16, complete sequence Length = 189215 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 ctctctatatatatctctctgtctc 25 |||||||||||||||||| |||||| Sbjct: 137637 ctctctatatatatctctgtgtctc 137613
>emb|AL670720.7| Mouse DNA sequence from clone RP23-321M9 on chromosome 4, complete sequence Length = 200628 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 atatctctctgtctccctctc 31 ||||||||||||||||||||| Sbjct: 184045 atatctctctgtctccctctc 184025
>emb|AL591390.8| Mouse DNA sequence from clone RP23-355L10 on chromosome 11, complete sequence Length = 186134 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 11 atatctctctgtctccctctc 31 ||||||||||||||||||||| Sbjct: 15692 atatctctctgtctccctctc 15672
>dbj|AP000949.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B606F19, LL56-APP region, complete sequence Length = 146670 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 32 attcattcatttttatggcag 52 ||||||||||||||||||||| Sbjct: 108522 attcattcatttttatggcag 108502
>gb|AC116896.7| Mus musculus chromosome 8, clone RP24-531D19, complete sequence Length = 163072 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tatctctctgtctccctctc 31 |||||||||||||||||||| Sbjct: 65266 tatctctctgtctccctctc 65285
>gb|AC120420.11| Mus musculus chromosome 5, clone RP24-481P22, complete sequence Length = 213649 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tctctctgtctccctctcattcat 37 |||||||||||| ||||||||||| Sbjct: 192930 tctctctgtctctctctcattcat 192953
>gb|AC110560.11| Mus musculus chromosome 3, clone RP23-254K1, complete sequence Length = 156067 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ccctctcattcattcatttt 44 |||||||||||||||||||| Sbjct: 39 ccctctcattcattcatttt 20
>gb|AC151366.3| Aotus nancymaae clone CH258-105B22, complete sequence Length = 188026 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 tctctctgtctccctctcattcat 37 ||||||| |||||||||||||||| Sbjct: 76164 tctctctctctccctctcattcat 76141
>gb|AC164094.5| Mus musculus BAC clone RP23-133F10 from chromosome 6, complete sequence Length = 216271 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 tctccctctcattcattcattttt 45 |||| ||||||||||||||||||| Sbjct: 204782 tctctctctcattcattcattttt 204805
>gb|AC158793.4| Mus musculus chromosome 1, clone RP23-269P13, complete sequence Length = 183447 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ctctctatatatatctctctgtct 24 |||||||||| ||||||||||||| Sbjct: 71139 ctctctatatttatctctctgtct 71116
>gb|AF322397.1| Vigna radiata clone LR154 microsatellite sequence Length = 659 Score = 40.1 bits (20), Expect = 5.4 Identities = 29/32 (90%) Strand = Plus / Minus Query: 14 tctctctgtctccctctcattcattcattttt 45 ||||||| |||| |||||| |||||||||||| Sbjct: 649 tctctctctctctctctcactcattcattttt 618
>gb|AC117721.8| Mus musculus chromosome 1, clone RP24-196D2, complete sequence Length = 170426 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 ctctctgtctccctctcatt 34 |||||||||||||||||||| Sbjct: 66527 ctctctgtctccctctcatt 66546
>gb|AC158939.9| Mus musculus chromosome 5, clone RP23-204A8, complete sequence Length = 218847 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tatctctctgtctccctctc 31 |||||||||||||||||||| Sbjct: 110830 tatctctctgtctccctctc 110811
>gb|AC121292.9| Mus musculus chromosome 1, clone RP23-172B15, complete sequence Length = 193192 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tcattcattcatttttatgg 49 |||||||||||||||||||| Sbjct: 66583 tcattcattcatttttatgg 66564
>gb|AC150544.3| Bos taurus BAC CH240-75C8 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 190186 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 138498 ctctctatatatatctctct 138517
>gb|AC125346.4| Mus musculus BAC clone RP24-87B17 from chromosome 5, complete sequence Length = 187912 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 tctctctgtctccctctcattcat 37 |||||||||||| ||||||||||| Sbjct: 463 tctctctgtctctctctcattcat 440
>gb|AC147227.4| Mus musculus BAC clone RP23-153H22 from chromosome 18, complete sequence Length = 204482 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 8 tatatatctctctgtctccctctcattc 35 ||||| |||| ||||||||||||||||| Sbjct: 37428 tatatgtctcactgtctccctctcattc 37401
>gb|AC162616.7| Mus musculus chromosome 5, clone RP23-260P17, complete sequence Length = 180400 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tctctctgtctccctctcattcat 37 |||||||||||| ||||||||||| Sbjct: 5696 tctctctgtctctctctcattcat 5719
>gb|AC161228.7| Mus musculus chromosome 3, clone RP24-77I5, complete sequence Length = 222551 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 tctctatatatatctctctgtctc 25 ||||| |||||||||||||||||| Sbjct: 119825 tctctctatatatctctctgtctc 119848
>gb|AY551231.1| Oryza sativa precursor microRNA 166i gene, complete sequence Length = 200 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattccc 157 |||||||||||||||||||| Sbjct: 147 tcggaccaggcttcattccc 166
>gb|AC121290.6| Mus musculus chromosome 16, clone RP23-84N4, complete sequence Length = 241184 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 14 tctctctgtctccctctcattcattcat 41 |||||||||||||| ||||| ||||||| Sbjct: 23884 tctctctgtctccccctcatgcattcat 23857
>gb|AC146144.2| Pan troglodytes BAC clone RP43-37J17 from 7, complete sequence Length = 206029 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 193997 ctctctatatatatctctct 194016
>gb|AC146041.2| Pan troglodytes BAC clone RP43-98A7 from 7, complete sequence Length = 120644 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 64226 ctctctatatatatctctct 64207
>emb|CT009488.4| M.truncatula DNA sequence from clone MTH2-70J8 on chromosome 3, complete sequence Length = 119377 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 138 tcggaccaggcttcattcccccca 161 ||||||||||||||||||| |||| Sbjct: 103310 tcggaccaggcttcattcctccca 103287
>gb|AC124563.4| Mus musculus BAC clone RP23-206B15 from chromosome 6, complete sequence Length = 210092 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 22 tctccctctcattcattcattttt 45 |||| ||||||||||||||||||| Sbjct: 152467 tctctctctcattcattcattttt 152444
>gb|AC124350.4| Mus musculus BAC clone RP24-466K21 from chromosome 8, complete sequence Length = 160905 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tatctctctgtctccctctc 31 |||||||||||||||||||| Sbjct: 49107 tatctctctgtctccctctc 49088
>gb|AC121802.3| Mus musculus BAC clone RP23-434N18 from chromosome 18, complete sequence Length = 187787 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 8 tatatatctctctgtctccctctcattc 35 ||||| |||| ||||||||||||||||| Sbjct: 18382 tatatgtctcactgtctccctctcattc 18409
>gb|AC125223.3| Mus musculus BAC clone RP23-31C10 from 13, complete sequence Length = 221903 Score = 40.1 bits (20), Expect = 5.4 Identities = 32/36 (88%) Strand = Plus / Minus Query: 1 ctctctatatatatctctctgtctccctctcattca 36 |||||| ||| |||||||||||||| ||||| |||| Sbjct: 78207 ctctctctatctatctctctgtctctctctctttca 78172
>gb|AC123557.4| Mus musculus BAC clone RP23-183P22 from 1, complete sequence Length = 198349 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 14 tctctctgtctccctctcattcat 37 |||||||||||||||||| ||||| Sbjct: 172699 tctctctgtctccctctccttcat 172722
>gb|AC125215.4| Mus musculus BAC clone RP23-93K19 from 6, complete sequence Length = 215584 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tatctctctgtctccctctc 31 |||||||||||||||||||| Sbjct: 148599 tatctctctgtctccctctc 148580
>gb|AC122140.2| Mus musculus BAC clone RP24-270F2 from 17, complete sequence Length = 200761 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 134796 ctctctatatatatctctct 134777
>gb|AC117210.3| Mus musculus BAC clone RP23-286E20 from 10, complete sequence Length = 178173 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 24963 ctctctatatatatctctct 24944
>gb|AC146378.2| Pan troglodytes BAC clone RP43-93I8 from 7, complete sequence Length = 135955 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 107257 ctctctatatatatctctct 107238
>emb|CR936845.11| Mouse DNA sequence from clone DN-279H6 on chromosome 11, complete sequence Length = 101662 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 15 ctctctgtctccctctcattcattcatt 42 |||||| |||| |||||||||||||||| Sbjct: 78818 ctctctctctctctctcattcattcatt 78845
>emb|AL627082.8| Human DNA sequence from clone RP4-785J1 on chromosome 1 Contains a chromosome 20 open reading frame 52 (C20orf520) pseudogene, complete sequence Length = 39923 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 24 tccctctcattcattcattt 43 |||||||||||||||||||| Sbjct: 26782 tccctctcattcattcattt 26763
>gb|AC158960.4| Mus musculus chromosome 1, clone RP23-315O2, complete sequence Length = 176947 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ctctctgtctccctctcatt 34 |||||||||||||||||||| Sbjct: 165057 ctctctgtctccctctcatt 165038
>gb|AC108850.3| Mus musculus chromosome 1, clone RP24-85N11, complete sequence Length = 194889 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 14 tctctctgtctccctctcattcat 37 |||||||||||||||||| ||||| Sbjct: 171097 tctctctgtctccctctccttcat 171074
>gb|AC158571.3| Mus musculus chromosome 3, clone RP23-117E23, complete sequence Length = 197545 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ccctctcattcattcatttt 44 |||||||||||||||||||| Sbjct: 154273 ccctctcattcattcatttt 154254
>emb|AL034412.2|HS99M1 Human DNA sequence from clone RP6-99M1 on chromosome Xp11.1-11.4 Contains a novel pseudogene (GL004), complete sequence Length = 107049 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 20 tgtctccctctcattcattc 39 |||||||||||||||||||| Sbjct: 40471 tgtctccctctcattcattc 40490
>gb|AC163678.3| Mus musculus BAC clone RP24-104D14 from chromosome 10, complete sequence Length = 196603 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 186223 ctctctatatatatctctct 186204
>emb|BX294142.1| Pirellula sp. strain 1 complete genome; segment 10/24 Length = 294050 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cttcggcttcggcacaaatc 197 |||||||||||||||||||| Sbjct: 217403 cttcggcttcggcacaaatc 217422
>gb|AF549492.1| Coccotrypes dactyliperda clone MTB-19-C11 microsatellite sequence Length = 352 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 4 tctatatatatctctctgtctccctctc 31 ||||||||||||||||| |||| ||||| Sbjct: 91 tctatatatatctctctctctctctctc 118
>emb|AL596207.10| Mouse DNA sequence from clone RP23-336J1 on chromosome 11 Contains the 5' end of the Sparc gene for secreted acidic cysteine rich glycoprotein, the Atox1 gene for ATX1 (antioxidant protein 1) homolog 1 (yeast), an upregulated during skeletal muscle growth 5 (Usmg5) pseudogene, the gene for Ras-GTPase-activating protein SH3-domain binding protein (G3bp-pending) (C87777), a novel gene, the Glra1 gene for glycine receptor, alpha 1 subunit, a novel gene, a ubiquitously expressed transcript (Uxt) pseudogene and one CpG island, complete sequence Length = 204037 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tatatctctctgtctccctc 29 |||||||||||||||||||| Sbjct: 13037 tatatctctctgtctccctc 13056
>emb|AL109743.4|HSJ590P13 Human DNA sequence from clone RP4-590P13 on chromosome 1p35.1-36.12 Contains the 3' end of the RPS6KA1 (ribosomal protein S6 kinase, 90kD,polypeptide 1) gene, ESTs, STSs, GSSs and 2 CpG islands, complete sequence Length = 96006 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 tccctctcattcattcattt 43 |||||||||||||||||||| Sbjct: 87904 tccctctcattcattcattt 87923
>emb|BX927244.11| Zebrafish DNA sequence from clone CH211-116O3 in linkage group 15, complete sequence Length = 152919 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 ccctctcattcattcatttt 44 |||||||||||||||||||| Sbjct: 89193 ccctctcattcattcatttt 89212
>gb|AC106726.3| Homo sapiens 3 BAC RP11-450I19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 200359 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 4 tctatatatatctctctgtctccctctc 31 ||||||||| |||||||||||| ||||| Sbjct: 149079 tctatatatctctctctgtctctctctc 149052
>gb|AC104117.2| Homo sapiens chromosome 5 clone RP11-281O15, complete sequence Length = 211975 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ttcattcatttttatggcag 52 |||||||||||||||||||| Sbjct: 175603 ttcattcatttttatggcag 175584
>dbj|AK094363.1| Homo sapiens cDNA FLJ37044 fis, clone BRACE2012062, weakly similar to CALCIUM-BINDING PROTEIN P22 Length = 2544 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 1537 ctctctatatatatctctct 1518
>gb|AC146333.35| Medicago truncatula clone mth2-8d3, complete sequence Length = 122694 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 38325 ctctctatatatatctctct 38306
>gb|AC087332.6| Mus Musculus Chromosome 2 RP23-58L18, complete sequence Length = 143720 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 tctctatatatatctctctgtctc 25 ||||| |||||||||||||||||| Sbjct: 54665 tctctctatatatctctctgtctc 54688
>gb|AC103716.2| Homo sapiens chromosome 8, clone RP11-344I13, complete sequence Length = 180624 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 135095 ctctctatatatatctctct 135076
>gb|AC090588.5| Homo sapiens chromosome 11, clone RP11-384E5, complete sequence Length = 152572 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 tatatatctctctgtctccctctc 31 ||||||||| |||||||||||||| Sbjct: 31716 tatatatctatctgtctccctctc 31693
>gb|AC073584.6| Homo sapiens chromosome 10 clone RP11-47O13, complete sequence Length = 171089 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 attcattcatttttatggca 51 |||||||||||||||||||| Sbjct: 28941 attcattcatttttatggca 28960
>gb|AC008743.9| Homo sapiens chromosome 19 clone CTD-2560K21, complete sequence Length = 192097 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 126425 ctctctatatatatctctct 126406
>gb|AC098682.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0004A10, from chromosome 10, complete sequence Length = 144271 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 75491 ctctctatatatatctctct 75472
>gb|AC104658.6| Homo sapiens BAC clone RP11-593M6 from 4, complete sequence Length = 140028 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tctccctctcattcattcat 41 |||||||||||||||||||| Sbjct: 39855 tctccctctcattcattcat 39836
>dbj|AK139473.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830095F08 product:hypothetical protein, full insert sequence Length = 2544 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 tatatctctctgtctccctc 29 |||||||||||||||||||| Sbjct: 766 tatatctctctgtctccctc 747
>gb|AC008883.6| Homo sapiens chromosome 5 clone CTD-2215E18, complete sequence Length = 127144 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 31 cattcattcatttttatggc 50 |||||||||||||||||||| Sbjct: 46524 cattcattcatttttatggc 46543
>gb|AC139053.15| Mus musculus chromosome 1, clone RP23-2I19, complete sequence Length = 232850 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 ctctctgtctccctctcatt 34 |||||||||||||||||||| Sbjct: 50961 ctctctgtctccctctcatt 50942
>gb|AC021188.6| Homo sapiens BAC clone RP11-759A7 from 2, complete sequence Length = 236486 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 80177 ctctctatatatatctctct 80158
>gb|AC093067.2| Homo sapiens chromosome 19 clone LLNLR-240D7, complete sequence Length = 6153 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 atctctctgtctccctctca 32 |||||||||||||||||||| Sbjct: 924 atctctctgtctccctctca 905
>gb|DP000003.1| Atelerix albiventris target 1 genomic scaffold Length = 2136267 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tatctctctgtctccctctc 31 |||||||||||||||||||| Sbjct: 133437 tatctctctgtctccctctc 133418
>gb|AC127466.3| Atelerix albiventris clone LB4-197A24, complete sequence Length = 163018 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tatctctctgtctccctctc 31 |||||||||||||||||||| Sbjct: 68331 tatctctctgtctccctctc 68312
>gb|AC157279.2| Mus musculus BAC clone RP23-149H21 from chromosome 13, complete sequence Length = 187493 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tatctctctgtctccctctc 31 |||||||||||||||||||| Sbjct: 15752 tatctctctgtctccctctc 15771
>gb|AC012652.7| Homo sapiens chromosome 15 clone RP11-46M12 map 15q15, complete sequence Length = 169825 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 102912 ctctctatatatatctctct 102893
>gb|AC008129.21| Homo sapiens 12 BAC RP11-478H3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 77083 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 19406 ctctctatatatatctctct 19425
>gb|AC005390.1|AC005390 Homo sapiens chromosome 19, cosmid R31180, complete sequence Length = 39470 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 atctctctgtctccctctca 32 |||||||||||||||||||| Sbjct: 39221 atctctctgtctccctctca 39202
>dbj|AK089114.1| Mus musculus 10 days neonate olfactory brain cDNA, RIKEN full-length enriched library, clone:E530001D12 product:unclassifiable, full insert sequence Length = 2596 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 tatatctctctgtctccctc 29 |||||||||||||||||||| Sbjct: 785 tatatctctctgtctccctc 766
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 12124596 ctctctatatatatctctct 12124615
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattccc 157 |||||||||||||||||||| Sbjct: 23038261 tcggaccaggcttcattccc 23038280
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 3802906 ctctctatatatatctctct 3802887
>emb|AL670860.6| Mouse DNA sequence from clone RP23-50K11 on chromosome 2, complete sequence Length = 83914 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 tctccctctcattcattcat 41 |||||||||||||||||||| Sbjct: 2214 tctccctctcattcattcat 2233
>gb|AC156995.6| Mus musculus chromosome 5, clone RP23-77E18, complete sequence Length = 138507 Score = 40.1 bits (20), Expect = 5.4 Identities = 30/32 (93%), Gaps = 1/32 (3%) Strand = Plus / Plus Query: 1 ctctctatatatat-ctctctgtctccctctc 31 |||||||||||||| ||||||||||| ||||| Sbjct: 29099 ctctctatatatatactctctgtctctctctc 29130
>gb|AC109349.3| Homo sapiens BAC clone RP11-100L2 from 4, complete sequence Length = 44331 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 10359 ctctctatatatatctctct 10378
>gb|AC100735.15| Mus musculus chromosome 7, clone RP24-331F7, complete sequence Length = 179974 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 14 tctctctgtctccctctcat 33 |||||||||||||||||||| Sbjct: 100875 tctctctgtctccctctcat 100894
>gb|AC154545.2| Mus musculus BAC clone RP23-431G16 from chromosome 16, complete sequence Length = 202933 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 14 tctctctgtctccctctcattcattcat 41 |||||||||||||| ||||| ||||||| Sbjct: 195034 tctctctgtctccccctcatgcattcat 195007
>gb|AC026881.6|AC026881 Homo sapiens chromosome 3 clone RP11-211B19 map 3p, complete sequence Length = 146022 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tctctgtctccctctcattc 35 |||||||||||||||||||| Sbjct: 24681 tctctgtctccctctcattc 24700
>gb|AC024154.2|AC024154 Homo sapiens chromosome 3 clone RP11-487J12 map 3p, complete sequence Length = 204797 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tctctgtctccctctcattc 35 |||||||||||||||||||| Sbjct: 155215 tctctgtctccctctcattc 155196
>gb|AC103953.8| Homo sapiens chromosome 8, clone CTD-2571K21, complete sequence Length = 216373 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 54965 ctctctatatatatctctct 54946
>gb|AC124067.10| Homo sapiens chromosome 8, clone RP11-150O12, complete sequence Length = 179201 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 atatctctctgtctccctct 30 |||||||||||||||||||| Sbjct: 131739 atatctctctgtctccctct 131758
>gb|AC025920.12|AC025920 Homo sapiens chromosome N/A clone RP11-277D17, complete sequence Length = 161489 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 16 tctctgtctccctctcattc 35 |||||||||||||||||||| Sbjct: 16174 tctctgtctccctctcattc 16155
>dbj|AP004670.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0496D04 Length = 197358 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 42018 ctctctatatatatctctct 41999
>dbj|AP005840.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0050F10 Length = 151986 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 147257 ctctctatatatatctctct 147238
>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1759_F09 Length = 149501 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 36055 ctctctatatatatctctct 36074
>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0564H06 Length = 146823 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 58975 ctctctatatatatctctct 58994
>emb|AL845160.8| Mouse DNA sequence from clone RP23-303O15 on chromosome 2, complete sequence Length = 170074 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 23 ctccctctcattcattcatt 42 |||||||||||||||||||| Sbjct: 80687 ctccctctcattcattcatt 80668
>gb|AC007305.40| Mus musculus strain 129/SvJ clone mgs1-211l20 map 6, complete sequence Length = 214840 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 1 ctctctatatatatctctctgtct 24 |||||||||||||||| ||||||| Sbjct: 74954 ctctctatatatatctatctgtct 74977
>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0470B03 Length = 163371 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 138 tcggaccaggcttcattccc 157 |||||||||||||||||||| Sbjct: 97989 tcggaccaggcttcattccc 98008
>emb|CR848009.9| Zebrafish DNA sequence from clone CH211-210O21 in linkage group 15, complete sequence Length = 157273 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 25 ccctctcattcattcatttt 44 |||||||||||||||||||| Sbjct: 42379 ccctctcattcattcatttt 42360
>emb|CT030689.10| Mouse DNA sequence from clone RP23-70C3 on chromosome 16, complete sequence Length = 57746 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ctctctatatatatctctctgtct 24 |||||||||||||||||| ||||| Sbjct: 8127 ctctctatatatatctctgtgtct 8104
>dbj|AP001759.1| Homo sapiens genomic DNA, chromosome 21q, section 103/105 Length = 340000 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tatctctctgtctccctctc 31 |||||||||||||||||||| Sbjct: 3051 tatctctctgtctccctctc 3032
>emb|BX957271.6| Zebrafish DNA sequence from clone CH211-130N22 in linkage group 10, complete sequence Length = 161165 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 13 atctctctgtctccctctca 32 |||||||||||||||||||| Sbjct: 150627 atctctctgtctccctctca 150608
>dbj|AP006302.1| Homo sapiens genomic DNA, chromosome 8 clone:RP11-150O12, complete sequence Length = 179216 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 atatctctctgtctccctct 30 |||||||||||||||||||| Sbjct: 47468 atatctctctgtctccctct 47449
>dbj|AP003127.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-710G6, complete sequences Length = 161238 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 148427 ctctctatatatatctctct 148446
>dbj|AP001034.5| Homo sapiens genomic DNA, chromosome 11q clone:RP11-729B4, complete sequence Length = 167934 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 37552 ctctctatatatatctctct 37571
>gb|AC154585.2| Mus musculus BAC clone RP23-359K10 from 12, complete sequence Length = 198520 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tatctctctgtctccctctc 31 |||||||||||||||||||| Sbjct: 43016 tatctctctgtctccctctc 42997
>emb|BX000691.12| Mouse DNA sequence from clone RP23-107A12 on chromosome X, complete sequence Length = 117743 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 74604 ctctctatatatatctctct 74623
>gb|AC155889.2| Medicago truncatula chromosome 2 BAC clone mth2-31j12, complete sequence Length = 122733 Score = 40.1 bits (20), Expect = 5.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 138 tcggaccaggcttcattccccccaactc 165 ||||||||||||||||||| ||||||| Sbjct: 41957 tcggaccaggcttcattcctaccaactc 41930
>gb|AC153850.3| Mus musculus 6 BAC RP23-81F19 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194042 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 ctctctatatatatctctctgtct 24 |||||||||||||||| ||||||| Sbjct: 56847 ctctctatatatatctatctgtct 56824
>emb|AL845470.6| Mouse DNA sequence from clone RP23-204G5 on chromosome 2, complete sequence Length = 90648 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 tctctatatatatctctctgtctc 25 ||||| |||||||||||||||||| Sbjct: 54402 tctctctatatatctctctgtctc 54379
>emb|AJ011932.1|HSQ4H9 Homo sapiens chromosome 21q22.3, cosmid clone Q4H9 complete sequence bases 1..41604 Length = 41604 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tatctctctgtctccctctc 31 |||||||||||||||||||| Sbjct: 31593 tatctctctgtctccctctc 31574
>emb|AL627182.22| Mouse DNA sequence from clone RP23-32K12 on chromosome 4, complete sequence Length = 241562 Score = 40.1 bits (20), Expect = 5.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 266 gtgctccatccaccatcaccatgc 289 |||||||| ||||||||||||||| Sbjct: 108643 gtgctccagccaccatcaccatgc 108620
>emb|Y09380.1|HSCOL6I3 H.sapiens COL6A1 gene, intron 3 and repeat region Length = 456 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tatctctctgtctccctctc 31 |||||||||||||||||||| Sbjct: 103 tatctctctgtctccctctc 84
>gb|M54871.1|MUSIAPFL1 Mus musculus cellular DNA flanking the 5' end of intracisternal A-particle 81 Length = 849 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ctctctatatatatctctct 20 |||||||||||||||||||| Sbjct: 395 ctctctatatatatctctct 414
>gb|AC165249.2| Mus musculus BAC clone RP24-157P13 from chromosome 12, complete sequence Length = 193902 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 tatctctctgtctccctctc 31 |||||||||||||||||||| Sbjct: 31846 tatctctctgtctccctctc 31865
>emb|Z74022.1|HSU90B3 Human DNA sequence from clone LL0XNC01-90B3 on chromosome Xp11, complete sequence Length = 35609 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 tgtctccctctcattcattc 39 |||||||||||||||||||| Sbjct: 18942 tgtctccctctcattcattc 18923
>gb|AC069277.6| Homo sapiens chromosome 3 clone RP11-529B17 map 3p, complete sequence Length = 159908 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 16 tctctgtctccctctcattc 35 |||||||||||||||||||| Sbjct: 3896 tctctgtctccctctcattc 3915
>gb|AC160122.2| Mus musculus BAC clone RP23-390G1 from chromosome 13, complete sequence Length = 208856 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 tatctctctgtctccctctc 31 |||||||||||||||||||| Sbjct: 5265 tatctctctgtctccctctc 5246
>dbj|AP000068.1| Homo sapiens genomic DNA, chromosome 8p11.2, senescence gene region, section 4/19 Length = 100000 Score = 40.1 bits (20), Expect = 5.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 11 atatctctctgtctccctct 30 |||||||||||||||||||| Sbjct: 72537 atatctctctgtctccctct 72556 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,104,120 Number of Sequences: 3902068 Number of extensions: 4104120 Number of successful extensions: 186334 Number of sequences better than 10.0: 191 Number of HSP's better than 10.0 without gapping: 196 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 185160 Number of HSP's gapped (non-prelim): 1176 length of query: 407 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 385 effective length of database: 17,147,199,772 effective search space: 6601671912220 effective search space used: 6601671912220 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
