ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet63d07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FUCO1_ARATH (Q8GW72) Alpha-L-fucosidase 1 precursor (EC 3.2.1.51... 41 7e-04
2FUCO1_ORYSA (Q7XUR3) Putative alpha-L-fucosidase 1 precursor (EC... 40 0.002
3SC11A_MOUSE (Q9R053) Sodium channel protein type 11 alpha subuni... 28 6.2

>FUCO1_ARATH (Q8GW72) Alpha-L-fucosidase 1 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase)
           (Alpha-1,3/4-fucosidase) (AtFUC1)
          Length = 506

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 18/31 (58%), Positives = 21/31 (67%)
 Frame = +3

Query: 156 TAAQLAWQRREVIMFFHFGMNTFTDVERGTG 248
           ++ QL WQ   + MF HFG NTFTD E GTG
Sbjct: 39  SSQQLQWQLGSMAMFLHFGPNTFTDSEWGTG 69



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>FUCO1_ORYSA (Q7XUR3) Putative alpha-L-fucosidase 1 precursor (EC 3.2.1.51)|
           (Alpha-L-fucoside fucohydrolase)
          Length = 517

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 18/32 (56%), Positives = 21/32 (65%)
 Frame = +3

Query: 162 AQLAWQRREVIMFFHFGMNTFTDVERGTGAED 257
           AQL WQ  E+ +F HFG NTFTD E G+   D
Sbjct: 43  AQLQWQLSEMALFLHFGPNTFTDSEWGSVRAD 74



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>SC11A_MOUSE (Q9R053) Sodium channel protein type 11 alpha subunit (Sodium channel|
            protein type XI alpha subunit) (Voltage-gated sodium
            channel alpha subunit Nav1.9) (Sensory neuron sodium
            channel 2) (NaN)
          Length = 1765

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 2/25 (8%)
 Frame = +3

Query: 189  VIMFFH--FGMNTFTDVERGTGAED 257
            ++MF +  FGMN F+ V+RG+G +D
Sbjct: 1485 LVMFIYAIFGMNWFSKVKRGSGIDD 1509


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,433,936
Number of Sequences: 219361
Number of extensions: 129228
Number of successful extensions: 409
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 409
length of database: 80,573,946
effective HSP length: 61
effective length of database: 67,192,925
effective search space used: 1612630200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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