ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet63d07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 155 bits (78), Expect = 8e-35 Identities = 111/122 (90%) Strand = Plus / Minus Query: 127 cgccgccgctgccggtgctacccatcccgacggcggcgcagctggcgtggcagcggcggg 186 ||||||||||||||||||| || | |||||||||||||||||| |||||||||||||| Sbjct: 20050288 cgccgccgctgccggtgctgccggtgccgacggcggcgcagctgaggtggcagcggcggg 20050229 Query: 187 aggtgatcatgttcttccacttcgggatgaacaccttcacggacgtggagcggggcacgg 246 |||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| Sbjct: 20050228 aggtgatcatgttcttccacttcgggatgaacacgttcacggactccgagtggggcacgg 20050169 Query: 247 gg 248 || Sbjct: 20050168 gg 20050167
>dbj|AP006175.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0669G04 Length = 74610 Score = 155 bits (78), Expect = 8e-35 Identities = 111/122 (90%) Strand = Plus / Minus Query: 127 cgccgccgctgccggtgctacccatcccgacggcggcgcagctggcgtggcagcggcggg 186 ||||||||||||||||||| || | |||||||||||||||||| |||||||||||||| Sbjct: 57419 cgccgccgctgccggtgctgccggtgccgacggcggcgcagctgaggtggcagcggcggg 57360 Query: 187 aggtgatcatgttcttccacttcgggatgaacaccttcacggacgtggagcggggcacgg 246 |||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| Sbjct: 57359 aggtgatcatgttcttccacttcgggatgaacacgttcacggactccgagtggggcacgg 57300 Query: 247 gg 248 || Sbjct: 57299 gg 57298
>dbj|AK109462.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-D03, full insert sequence Length = 1576 Score = 155 bits (78), Expect = 8e-35 Identities = 111/122 (90%) Strand = Plus / Plus Query: 127 cgccgccgctgccggtgctacccatcccgacggcggcgcagctggcgtggcagcggcggg 186 ||||||||||||||||||| || | |||||||||||||||||| |||||||||||||| Sbjct: 121 cgccgccgctgccggtgctgccggtgccgacggcggcgcagctgaggtggcagcggcggg 180 Query: 187 aggtgatcatgttcttccacttcgggatgaacaccttcacggacgtggagcggggcacgg 246 |||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||| Sbjct: 181 aggtgatcatgttcttccacttcgggatgaacacgttcacggactccgagtggggcacgg 240 Query: 247 gg 248 || Sbjct: 241 gg 242
>ref|XM_550211.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3180 Score = 48.1 bits (24), Expect = 0.014 Identities = 24/24 (100%) Strand = Plus / Minus Query: 118 cgcgggtgccgccgccgctgccgg 141 |||||||||||||||||||||||| Sbjct: 204 cgcgggtgccgccgccgctgccgg 181
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.014 Identities = 24/24 (100%) Strand = Plus / Plus Query: 118 cgcgggtgccgccgccgctgccgg 141 |||||||||||||||||||||||| Sbjct: 3089685 cgcgggtgccgccgccgctgccgg 3089708 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tgccgccgccgctgccggtg 143 |||||||||||||||||||| Sbjct: 13347180 tgccgccgccgctgccggtg 13347161
>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0041E11 Length = 146335 Score = 48.1 bits (24), Expect = 0.014 Identities = 24/24 (100%) Strand = Plus / Plus Query: 118 cgcgggtgccgccgccgctgccgg 141 |||||||||||||||||||||||| Sbjct: 33473 cgcgggtgccgccgccgctgccgg 33496
>dbj|AK066765.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013082G02, full insert sequence Length = 3180 Score = 48.1 bits (24), Expect = 0.014 Identities = 24/24 (100%) Strand = Plus / Minus Query: 118 cgcgggtgccgccgccgctgccgg 141 |||||||||||||||||||||||| Sbjct: 204 cgcgggtgccgccgccgctgccgg 181
>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0433F09 Length = 150150 Score = 48.1 bits (24), Expect = 0.014 Identities = 24/24 (100%) Strand = Plus / Plus Query: 118 cgcgggtgccgccgccgctgccgg 141 |||||||||||||||||||||||| Sbjct: 57725 cgcgggtgccgccgccgctgccgg 57748
>gb|AY741093.1| Integration vector pJK202, complete sequence Length = 53204 Score = 46.1 bits (23), Expect = 0.054 Identities = 23/23 (100%) Strand = Plus / Plus Query: 71 cctggcggtcgtcgtcgccggcg 93 ||||||||||||||||||||||| Sbjct: 24612 cctggcggtcgtcgtcgccggcg 24634
>emb|AJ744860.1| uncultured bacterium pTB11 plasmid complete genome Length = 68869 Score = 46.1 bits (23), Expect = 0.054 Identities = 23/23 (100%) Strand = Plus / Plus Query: 71 cctggcggtcgtcgtcgccggcg 93 ||||||||||||||||||||||| Sbjct: 45095 cctggcggtcgtcgtcgccggcg 45117
>emb|X59793.1|ECRP4TRA E.coli broad-host-range IncP-alpha plasmid RP4 traA, traB, traC-1, traC-2 & traD genes Length = 4412 Score = 46.1 bits (23), Expect = 0.054 Identities = 23/23 (100%) Strand = Plus / Minus Query: 71 cctggcggtcgtcgtcgccggcg 93 ||||||||||||||||||||||| Sbjct: 3104 cctggcggtcgtcgtcgccggcg 3082
>gb|AE004641.1| Pseudomonas aeruginosa PAO1, section 202 of 529 of the complete genome Length = 12075 Score = 46.1 bits (23), Expect = 0.054 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 ggcggtcgtcgtcgccggcgtgg 96 ||||||||||||||||||||||| Sbjct: 1128 ggcggtcgtcgtcgccggcgtgg 1106
>gb|L27758.1|BIACOMGEN Birmingham IncP-alpha plasmid (R18, R68, RK2, RP1, RP4) complete genome Length = 60099 Score = 46.1 bits (23), Expect = 0.054 Identities = 23/23 (100%) Strand = Plus / Plus Query: 71 cctggcggtcgtcgtcgccggcg 93 ||||||||||||||||||||||| Sbjct: 40836 cctggcggtcgtcgtcgccggcg 40858
>gb|AC135497.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0008E02, complete sequence Length = 152974 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 ccatcccgacggcggcgcagct 169 |||||||||||||||||||||| Sbjct: 867 ccatcccgacggcggcgcagct 888
>gb|AC135499.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0031M14, complete sequence Length = 49269 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Minus Query: 148 ccatcccgacggcggcgcagct 169 |||||||||||||||||||||| Sbjct: 8160 ccatcccgacggcggcgcagct 8139
>gb|AY738117.1| Homo sapiens matrix metalloproteinase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) (MMP2) gene, complete cds Length = 31017 Score = 44.1 bits (22), Expect = 0.21 Identities = 31/34 (91%) Strand = Plus / Plus Query: 95 ggcggaggcggcgggggctgggacgcgggtgccg 128 ||||| |||||||||||||||| |||||| |||| Sbjct: 2062 ggcggcggcggcgggggctggggcgcgggggccg 2095
>ref|NM_004530.2| Homo sapiens matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase) (MMP2), mRNA Length = 3546 Score = 44.1 bits (22), Expect = 0.21 Identities = 31/34 (91%) Strand = Plus / Plus Query: 95 ggcggaggcggcgggggctgggacgcgggtgccg 128 ||||| |||||||||||||||| |||||| |||| Sbjct: 111 ggcggcggcggcgggggctggggcgcgggggccg 144
>ref|XM_954352.1| Neurospora crassa OR74A hypothetical protein (NCU08138.1) partial mRNA Length = 954 Score = 44.1 bits (22), Expect = 0.21 Identities = 25/26 (96%) Strand = Plus / Plus Query: 122 ggtgccgccgccgctgccggtgctac 147 |||||||||||||| ||||||||||| Sbjct: 349 ggtgccgccgccgccgccggtgctac 374
>ref|XM_328843.1| Neurospora crassa OR74A hypothetical protein (NCU08138.1) partial mRNA Length = 954 Score = 44.1 bits (22), Expect = 0.21 Identities = 25/26 (96%) Strand = Plus / Plus Query: 122 ggtgccgccgccgctgccggtgctac 147 |||||||||||||| ||||||||||| Sbjct: 349 ggtgccgccgccgccgccggtgctac 374
>gb|BC002576.2| Homo sapiens matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase), mRNA (cDNA clone MGC:2313 IMAGE:3161383), complete cds Length = 3065 Score = 44.1 bits (22), Expect = 0.21 Identities = 31/34 (91%) Strand = Plus / Plus Query: 95 ggcggaggcggcgggggctgggacgcgggtgccg 128 ||||| |||||||||||||||| |||||| |||| Sbjct: 73 ggcggcggcggcgggggctggggcgcgggggccg 106
>emb|CR858407.1| Pongo pygmaeus mRNA; cDNA DKFZp459O1932 (from clone DKFZp459O1932) Length = 4500 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Plus Query: 125 gccgccgccgctgccggtgcta 146 |||||||||||||||||||||| Sbjct: 9 gccgccgccgctgccggtgcta 30
>gb|AC092352.2| Homo sapiens chromosome 16 clone RP11-2M17, complete sequence Length = 176117 Score = 44.1 bits (22), Expect = 0.21 Identities = 31/34 (91%) Strand = Plus / Minus Query: 95 ggcggaggcggcgggggctgggacgcgggtgccg 128 ||||| |||||||||||||||| |||||| |||| Sbjct: 57130 ggcggcggcggcgggggctggggcgcgggggccg 57097
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 ccatcccgacggcggcgcagct 169 |||||||||||||||||||||| Sbjct: 9310466 ccatcccgacggcggcgcagct 9310487
>gb|AC007336.6| Homo sapiens chromosome 16 clone RP11-212I21, complete sequence Length = 193963 Score = 44.1 bits (22), Expect = 0.21 Identities = 31/34 (91%) Strand = Plus / Plus Query: 95 ggcggaggcggcgggggctgggacgcgggtgccg 128 ||||| |||||||||||||||| |||||| |||| Sbjct: 94740 ggcggcggcggcgggggctggggcgcgggggccg 94773
>emb|AJ298926.1|HSA298926 Homo sapiens partial MMP2 gene for metalloproteinase 2, promoter region Length = 2180 Score = 44.1 bits (22), Expect = 0.21 Identities = 31/34 (91%) Strand = Plus / Plus Query: 95 ggcggaggcggcgggggctgggacgcgggtgccg 128 ||||| |||||||||||||||| |||||| |||| Sbjct: 1987 ggcggcggcggcgggggctggggcgcgggggccg 2020
>gb|U39394.1|SSU39394 Streptomyces sp. alpha-1,3/4-fucosidase precursor gene, complete cds Length = 1800 Score = 44.1 bits (22), Expect = 0.21 Identities = 25/26 (96%) Strand = Plus / Plus Query: 203 ccacttcgggatgaacaccttcacgg 228 ||||||||| |||||||||||||||| Sbjct: 345 ccacttcggcatgaacaccttcacgg 370
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Plus Query: 148 ccatcccgacggcggcgcagct 169 |||||||||||||||||||||| Sbjct: 9382163 ccatcccgacggcggcgcagct 9382184
>gb|M58552.1|HUMCLG4Q01 Human collagenase type IV (CLG4) gene, exon 1 Length = 868 Score = 44.1 bits (22), Expect = 0.21 Identities = 31/34 (91%) Strand = Plus / Plus Query: 95 ggcggaggcggcgggggctgggacgcgggtgccg 128 ||||| |||||||||||||||| |||||| |||| Sbjct: 512 ggcggcggcggcgggggctggggcgcgggggccg 545
>gb|M33789.1|HUMCLG4 Human type-4 collagenase (CLG4) preproenzyme gene, exon 1 Length = 451 Score = 44.1 bits (22), Expect = 0.21 Identities = 31/34 (91%) Strand = Plus / Plus Query: 95 ggcggaggcggcgggggctgggacgcgggtgccg 128 ||||| |||||||||||||||| |||||| |||| Sbjct: 97 ggcggcggcggcgggggctggggcgcgggggccg 130
>emb|X58968.1|HSTYPIVCL H.sapiens RNA for 5` sequence of type IV collagenase Length = 400 Score = 44.1 bits (22), Expect = 0.21 Identities = 31/34 (91%) Strand = Plus / Plus Query: 95 ggcggaggcggcgggggctgggacgcgggtgccg 128 ||||| |||||||||||||||| |||||| |||| Sbjct: 107 ggcggcggcggcgggggctggggcgcgggggccg 140
>ref|XM_464065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1797 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ctacccatcccgacggcggcg 164 ||||||||||||||||||||| Sbjct: 260 ctacccatcccgacggcggcg 280
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gccgccgctgccggtgctacc 148 ||||||||||||||||||||| Sbjct: 282041 gccgccgctgccggtgctacc 282021
>ref|XM_842931.1| Leishmania major strain Friedlin hypothetical protein (LMJ_0326) partial mRNA Length = 1380 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Minus Query: 128 gccgccgctgccggtgctacc 148 ||||||||||||||||||||| Sbjct: 735 gccgccgctgccggtgctacc 715
>gb|BC063484.1| Homo sapiens cDNA clone IMAGE:5242449, partial cds Length = 1344 Score = 42.1 bits (21), Expect = 0.84 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 tgccgccgccgctgccggtgctacc 148 ||||||||||||||||| ||||||| Sbjct: 65 tgccgccgccgctgccgctgctacc 89
>gb|AC023600.19| Homo sapiens 3 BAC RP11-754J20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 185326 Score = 42.1 bits (21), Expect = 0.84 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 tgccgccgccgctgccggtgctacc 148 ||||||||||||||||| ||||||| Sbjct: 442 tgccgccgccgctgccgctgctacc 466
>gb|BC105999.1| Homo sapiens cDNA clone MGC:104534 IMAGE:5259422, complete cds Length = 3868 Score = 42.1 bits (21), Expect = 0.84 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 tgccgccgccgctgccggtgctacc 148 ||||||||||||||||| ||||||| Sbjct: 82 tgccgccgccgctgccgctgctacc 106
>gb|U00096.2| Escherichia coli K-12 MG1655, complete genome Length = 4639675 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 ccgacggcggcgcagctggcg 173 ||||||||||||||||||||| Sbjct: 2571011 ccgacggcggcgcagctggcg 2570991
>gb|AE008811.1| Salmonella typhimurium LT2, section 115 of 220 of the complete genome Length = 21940 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 ccgacggcggcgcagctggcg 173 ||||||||||||||||||||| Sbjct: 912 ccgacggcggcgcagctggcg 892
>emb|AL834270.1|HSM805302 Homo sapiens mRNA; cDNA DKFZp761G128 (from clone DKFZp761G128) Length = 3315 Score = 42.1 bits (21), Expect = 0.84 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 tgccgccgccgctgccggtgctacc 148 ||||||||||||||||| ||||||| Sbjct: 52 tgccgccgccgctgccgctgctacc 76
>emb|AL627274.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 10/20 Length = 256050 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 ccgacggcggcgcagctggcg 173 ||||||||||||||||||||| Sbjct: 235256 ccgacggcggcgcagctggcg 235236
>dbj|AP009048.1| Escherichia coli W3110 DNA, complete genome Length = 4646332 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 ccgacggcggcgcagctggcg 173 ||||||||||||||||||||| Sbjct: 2571645 ccgacggcggcgcagctggcg 2571625
>gb|L78824.1|MSGB1529CS Mycobacterium leprae cosmid B1529 DNA sequence Length = 36985 Score = 42.1 bits (21), Expect = 0.84 Identities = 24/25 (96%) Strand = Plus / Plus Query: 75 gcggtcgtcgtcgccggcgtggcgg 99 ||||||||||||| ||||||||||| Sbjct: 36691 gcggtcgtcgtcgtcggcgtggcgg 36715
>ref|XM_943066.1| PREDICTED: Homo sapiens hypothetical protein LOC647858 (LOC647858), mRNA Length = 952 Score = 42.1 bits (21), Expect = 0.84 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 tgccgccgccgctgccggtgctacc 148 ||||||||||||||||| ||||||| Sbjct: 108 tgccgccgccgctgccgctgctacc 132
>ref|XM_931729.1| PREDICTED: Homo sapiens hypothetical protein LOC643665 (LOC643665), mRNA Length = 937 Score = 42.1 bits (21), Expect = 0.84 Identities = 24/25 (96%) Strand = Plus / Plus Query: 124 tgccgccgccgctgccggtgctacc 148 ||||||||||||||||| ||||||| Sbjct: 93 tgccgccgccgctgccgctgctacc 117
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Plus Query: 83 cgtcgccggcgtggcggaggc 103 ||||||||||||||||||||| Sbjct: 923913 cgtcgccggcgtggcggaggc 923933
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.84 Identities = 27/29 (93%) Strand = Plus / Minus Query: 80 cgtcgtcgccggcgtggcggaggcggcgg 108 |||||||||||||| ||||| |||||||| Sbjct: 2883889 cgtcgtcgccggcgcggcgggggcggcgg 2883861
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ctacccatcccgacggcggcg 164 ||||||||||||||||||||| Sbjct: 2002197 ctacccatcccgacggcggcg 2002217 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ggtcgtcgtcgccggcgtgg 96 |||||||||||||||||||| Sbjct: 5121457 ggtcgtcgtcgccggcgtgg 5121476
>gb|AC132660.7| Homo sapiens 3 BAC RP11-482K2 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 64263 Score = 42.1 bits (21), Expect = 0.84 Identities = 24/25 (96%) Strand = Plus / Minus Query: 124 tgccgccgccgctgccggtgctacc 148 ||||||||||||||||| ||||||| Sbjct: 1564 tgccgccgccgctgccgctgctacc 1540
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 ccgacggcggcgcagctggcg 173 ||||||||||||||||||||| Sbjct: 474012 ccgacggcggcgcagctggcg 474032
>dbj|AP006533.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0085L11 Length = 148142 Score = 42.1 bits (21), Expect = 0.84 Identities = 27/29 (93%) Strand = Plus / Minus Query: 80 cgtcgtcgccggcgtggcggaggcggcgg 108 |||||||||||||| ||||| |||||||| Sbjct: 127370 cgtcgtcgccggcgcggcgggggcggcgg 127342
>dbj|AP007223.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0046E09 Length = 146776 Score = 42.1 bits (21), Expect = 0.84 Identities = 27/29 (93%) Strand = Plus / Minus Query: 80 cgtcgtcgccggcgtggcggaggcggcgg 108 |||||||||||||| ||||| |||||||| Sbjct: 44035 cgtcgtcgccggcgcggcgggggcggcgg 44007
>dbj|AP005647.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0026E05 Length = 159860 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ctacccatcccgacggcggcg 164 ||||||||||||||||||||| Sbjct: 52405 ctacccatcccgacggcggcg 52425
>dbj|AP005474.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0081C13 Length = 144624 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Plus Query: 144 ctacccatcccgacggcggcg 164 ||||||||||||||||||||| Sbjct: 141758 ctacccatcccgacggcggcg 141778
>gb|AF093749.1|AF093749 Salmonella typhimurium strain LT2 NADP+-linked malic enzyme (maeB), partial cds; insertion element IS200 transposase, complete cds; eut operon, complete sequence; and unknown genes Length = 18023 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 ccgacggcggcgcagctggcg 173 ||||||||||||||||||||| Sbjct: 4388 ccgacggcggcgcagctggcg 4408
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 ccgacggcggcgcagctggcg 173 ||||||||||||||||||||| Sbjct: 468456 ccgacggcggcgcagctggcg 468476
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 ccgacggcggcgcagctggcg 173 ||||||||||||||||||||| Sbjct: 2590645 ccgacggcggcgcagctggcg 2590625
>gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic sequence Length = 230278 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Minus Query: 125 gccgccgccgctgccggtgct 145 ||||||||||||||||||||| Sbjct: 70200 gccgccgccgctgccggtgct 70180
>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome Length = 5528445 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 ccgacggcggcgcagctggcg 173 ||||||||||||||||||||| Sbjct: 3359019 ccgacggcggcgcagctggcg 3358999
>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome Length = 5498450 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 ccgacggcggcgcagctggcg 173 ||||||||||||||||||||| Sbjct: 3289185 ccgacggcggcgcagctggcg 3289165
>gb|U18560.1|STU18560 Salmonella typhimurium ethanolamine utilization gene cluster, eutI', partial cds, and cchA, cchB, eutE, eutJ, eutG and eutH genes, complete cds Length = 6291 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Plus Query: 153 ccgacggcggcgcagctggcg 173 ||||||||||||||||||||| Sbjct: 233 ccgacggcggcgcagctggcg 253
>gb|CP000036.1| Shigella boydii Sb227, complete genome Length = 4519823 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Minus Query: 153 ccgacggcggcgcagctggcg 173 ||||||||||||||||||||| Sbjct: 2461508 ccgacggcggcgcagctggcg 2461488
>gb|L20300.1|MUSCSX Mouse homeobox-containing gene (Csx) mRNA sequence Length = 982 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Minus Query: 94 tggcggaggcggcgggggctg 114 ||||||||||||||||||||| Sbjct: 870 tggcggaggcggcgggggctg 850
>gb|AF067609.1| Caenorhabditis elegans cosmid C23H5, complete sequence Length = 42985 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ggcggaggcggcgggggctg 114 |||||||||||||||||||| Sbjct: 36666 ggcggaggcggcgggggctg 36647
>ref|NM_187524.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1728 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gccgccgccgctgccggtgc 144 |||||||||||||||||||| Sbjct: 1578 gccgccgccgctgccggtgc 1597
>ref|XM_464425.1| Oryza sativa (japonica cultivar-group), mRNA Length = 210 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ggtcgtcgtcgccggcgtgg 96 |||||||||||||||||||| Sbjct: 79 ggtcgtcgtcgccggcgtgg 98
>ref|XM_464424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2180 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ggtcgtcgtcgccggcgtgg 96 |||||||||||||||||||| Sbjct: 54 ggtcgtcgtcgccggcgtgg 35
>ref|NM_183928.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1224 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tgccgccgccgctgccggtg 143 |||||||||||||||||||| Sbjct: 595 tgccgccgccgctgccggtg 576
>ref|NM_195345.1| Oryza sativa (japonica cultivar-group) putative acetyl transferase (OSJNBa0003P07.2), mRNA Length = 1458 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgacggcggcgcagctggcg 173 |||||||||||||||||||| Sbjct: 150 cgacggcggcgcagctggcg 169
>gb|BT018589.1| Zea mays clone EL01N0447A12.d mRNA sequence Length = 1744 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 gccgccgccgctgccggtgc 144 |||||||||||||||||||| Sbjct: 723 gccgccgccgctgccggtgc 704
>gb|AY023185.1| Oryza sativa microsatellite MRG5510 containing (GCG)X8, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 gccgccgccgctgccggtgc 144 |||||||||||||||||||| Sbjct: 111 gccgccgccgctgccggtgc 92
>gb|AF287967.1| Homo sapiens homeobox B7 (HOXB7) gene, partial cds; and homeobox B6 (HOXB6), homeobox B5 (HOXB5), homeobox B4 (HOXB4), and homeobox B3 (HOXB3) genes, complete cds Length = 59339 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggc 112 |||||||||||||||||||| Sbjct: 29846 gtggcggaggcggcgggggc 29827
>gb|AC093612.18| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0003P07, complete sequence Length = 175116 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgacggcggcgcagctggcg 173 |||||||||||||||||||| Sbjct: 10192 cgacggcggcgcagctggcg 10211
>gb|AC105768.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1122_B08, complete sequence Length = 143955 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tgccgccgccgctgccggtg 143 |||||||||||||||||||| Sbjct: 2193 tgccgccgccgctgccggtg 2174
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 3.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 71 cctggcggtcgtcgtcgccggcgtggcg 98 |||||| ||||||||||||||| ||||| Sbjct: 1925748 cctggctgtcgtcgtcgccggcctggcg 1925721
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 tcccgacggcggcgcagctg 170 |||||||||||||||||||| Sbjct: 923224 tcccgacggcggcgcagctg 923243
>ref|XM_416882.1| PREDICTED: Gallus gallus similar to ubiquitin protein ligase E3A isoform 3; human papilloma virus E6-associated protein; oncogenic protein-associated protein E6-AP; CTCL tumor antigen se37-2 (LOC418686), mRNA Length = 3627 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ggtgccgccgccgctgccgg 141 |||||||||||||||||||| Sbjct: 84 ggtgccgccgccgctgccgg 65
>gb|AC118286.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OJ1384_A02, complete sequence Length = 100251 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tgccgccgccgctgccggtg 143 |||||||||||||||||||| Sbjct: 77613 tgccgccgccgctgccggtg 77594
>gb|AY289797.1| Chlamydomonas reinhardtii GlsA-related protein gene, complete cds Length = 8177 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 122 ggtgccgccgccgctgccggtgct 145 ||||||||||||||||| |||||| Sbjct: 6499 ggtgccgccgccgctgctggtgct 6476
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gccgccgccgctgccggtgc 144 |||||||||||||||||||| Sbjct: 8625347 gccgccgccgctgccggtgc 8625366
>ref|XM_857343.1| PREDICTED: Canis familiaris similar to basic leucine zipper and W2 domains 2, transcript variant 3 (LOC475250), mRNA Length = 1655 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 118 cgcgggtgccgccgccgctgccgg 141 |||||||||| ||||||||||||| Sbjct: 5 cgcgggtgccaccgccgctgccgg 28
>gb|AY360171.1| Homo sapiens transducer of regulated CREB protein 1 (TORC1) mRNA, complete cds Length = 2563 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggctggg 116 |||| ||||||||||||||||||| Sbjct: 1196 gtggaggaggcggcgggggctggg 1173
>ref|XM_541492.2| PREDICTED: Canis familiaris similar to CG17233-PA, isoform A (LOC484377), mRNA Length = 6714 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggctggg 116 ||||||||||||| |||||||||| Sbjct: 980 gtggcggaggcggtgggggctggg 957
>gb|AC167227.1| Oryza sativa (japonica cultivar-group) chromosome unknown clone OSJNBb0026K11, complete sequence Length = 129643 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 cgggtgccgccgccgctgcc 139 |||||||||||||||||||| Sbjct: 26419 cgggtgccgccgccgctgcc 26438
>emb|AL355355.25| Human DNA sequence from clone RP11-730A19 on chromosome 10 Contains the 5' end of a novel gene (DKFZP761F241) (FLJ20925 FLJ38473), a ribosomal protein L5 (RPL5) pseudogene, the OPTN gene for optineurin, a small nuclear ribonucleoprotein polypeptide G (SNRPG) pseudogene, a pseudogene similar to part of COX10 homolog, cytochrome c oxidase assembly protein heme A: farnesyltransferase (yeast) (COX10), a novel pseudogene (FLJ10648 KIAA1525), a ribosomal protein L36A (RPL36A) pseudogene, the 5' end of the MCM10 gene for MCM10 minichromosome maintenance deficient 10 (S. cerevisiae), a pseudogene similar to part of chromodomain protein Y chromosome 1 (CDY1) and two CpG islands, complete sequence Length = 196203 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggc 112 |||||||||||||||||||| Sbjct: 182024 gtggcggaggcggcgggggc 182005
>emb|BX927150.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 3/10 Length = 348475 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 gatcatgttcttccacttcg 210 |||||||||||||||||||| Sbjct: 237394 gatcatgttcttccacttcg 237413
>gb|AC105377.12| Oryza sativa chromosome 10 BAC OSJNBa0034E15 genomic sequence, complete sequence Length = 100285 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgacggcggcgcagctggcg 173 |||||||||||||||||||| Sbjct: 89897 cgacggcggcgcagctggcg 89916
>emb|AL137449.1|HSM802160 Homo sapiens mRNA; cDNA DKFZp434G0128 (from clone DKFZp434G0128); partial cds Length = 1989 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggc 112 |||||||||||||||||||| Sbjct: 220 gtggcggaggcggcgggggc 201
>emb|CR628389.9| Zebrafish DNA sequence from clone DKEYP-81A1 in linkage group 21, complete sequence Length = 197111 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tctgctgtgctgctgcctgg 75 |||||||||||||||||||| Sbjct: 45243 tctgctgtgctgctgcctgg 45224 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tctgctgtgctgctgcctgg 75 |||||||||||||||||||| Sbjct: 30624 tctgctgtgctgctgcctgg 30605 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 56 tctgctgtgctgctgcctgg 75 |||||||||||||||||||| Sbjct: 26290 tctgctgtgctgctgcctgg 26271
>gb|AC010028.8| Drosophila melanogaster 3L BAC RP98-1E20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 187489 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tgccgccgccgctgccggtg 143 |||||||||||||||||||| Sbjct: 172317 tgccgccgccgctgccggtg 172298
>gb|AC103702.3| Homo sapiens chromosome 17, clone RP11-357H14, complete sequence Length = 187386 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggc 112 |||||||||||||||||||| Sbjct: 111414 gtggcggaggcggcgggggc 111395
>dbj|AK127209.1| Homo sapiens cDNA FLJ45276 fis, clone BRHIP3001076, highly similar to Homo sapiens murine retrovirus integration site 1 (MRVI1) Length = 3339 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ggagcggggcacgggggcggagga 256 ||||||||||||||||| |||||| Sbjct: 3097 ggagcggggcacgggggaggagga 3120
>emb|CR602840.1| full-length cDNA clone CS0DI051YE02 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 2443 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggctggg 116 |||| ||||||||||||||||||| Sbjct: 1150 gtggaggaggcggcgggggctggg 1127
>dbj|AK024089.1| Homo sapiens cDNA FLJ14027 fis, clone HEMBA1003827 Length = 2342 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggctggg 116 |||| ||||||||||||||||||| Sbjct: 1211 gtggaggaggcggcgggggctggg 1188
>gb|AC116664.1| Papio hamadryas, clone RP41-57E23, complete sequence Length = 175388 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggc 112 |||||||||||||||||||| Sbjct: 140848 gtggcggaggcggcgggggc 140829
>ref|NM_140066.1| Drosophila melanogaster CG14180-RA (CG14180), mRNA Length = 1142 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tgccgccgccgctgccggtg 143 |||||||||||||||||||| Sbjct: 324 tgccgccgccgctgccggtg 305
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 40.1 bits (20), Expect = 3.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 68 ctgcctggcggtcgtcgtcgccggcgtggcgg 99 ||||| |||||||| ||||||||||| ||||| Sbjct: 5334778 ctgcccggcggtcgccgtcgccggcgcggcgg 5334747 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 ccatcccgacggcggcgcag 167 |||||||||||||||||||| Sbjct: 1723835 ccatcccgacggcggcgcag 1723816
>gb|AC009532.9| Homo sapiens chromosome , clone RP11-58H20, complete sequence Length = 165698 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 ggagcggggcacgggggcggagga 256 ||||||||||||||||| |||||| Sbjct: 27628 ggagcggggcacgggggaggagga 27605
>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02, complete sequence Length = 137327 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gccgccgccgctgccggtgc 144 |||||||||||||||||||| Sbjct: 106319 gccgccgccgctgccggtgc 106338
>ref|NM_067766.2| Caenorhabditis elegans GRound-Like (grd related) family member (grl-20) (grl-20) mRNA, complete cds Length = 704 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 ggcggaggcggcgggggctg 114 |||||||||||||||||||| Sbjct: 113 ggcggaggcggcgggggctg 132
>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome Length = 195859 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 tgccgccgccgctgccggtg 143 |||||||||||||||||||| Sbjct: 174842 tgccgccgccgctgccggtg 174861
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gccgccgccgctgccggtgc 144 |||||||||||||||||||| Sbjct: 21734251 gccgccgccgctgccggtgc 21734270 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 gggtgccgccgccgctgccg 140 |||||||||||||||||||| Sbjct: 8760535 gggtgccgccgccgctgccg 8760554
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgacggcggcgcagctggcg 173 |||||||||||||||||||| Sbjct: 6292339 cgacggcggcgcagctggcg 6292358
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tgccgccgccgctgccggtg 143 |||||||||||||||||||| Sbjct: 8281125 tgccgccgccgctgccggtg 8281106
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gccgccgccgctgccggtgc 144 |||||||||||||||||||| Sbjct: 8623182 gccgccgccgctgccggtgc 8623201
>gb|AC130371.4| Homo sapiens chromosome 17, clone RP11-1197K16, complete sequence Length = 195613 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ggcggaggcggcgggggctg 114 |||||||||||||||||||| Sbjct: 83981 ggcggaggcggcgggggctg 83962
>gb|AC009789.21|AC009789 Homo sapiens chromosome 17, clone RP11-361K8, complete sequence Length = 168215 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggc 112 |||||||||||||||||||| Sbjct: 115284 gtggcggaggcggcgggggc 115265
>gb|AF307160.1|AF307160 Homo sapiens HOXB4 gene, complete cds Length = 3420 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggc 112 |||||||||||||||||||| Sbjct: 1711 gtggcggaggcggcgggggc 1692
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 gatcatgttcttccacttcg 210 |||||||||||||||||||| Sbjct: 933783 gatcatgttcttccacttcg 933802
>gb|AY040323.1| Homo sapiens mucoepidermoid susceptibility protein (MECT1) mRNA, complete cds Length = 2342 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggctggg 116 |||| ||||||||||||||||||| Sbjct: 1211 gtggaggaggcggcgggggctggg 1188
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 gtggcggaggcggcgggggc 112 |||||||||||||||||||| Sbjct: 6514014 gtggcggaggcggcgggggc 6514033
>gb|AC127518.8| Homo sapiens chromosome 17, clone RP13-629P20, complete sequence Length = 166080 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 ggcggaggcggcgggggctg 114 |||||||||||||||||||| Sbjct: 73855 ggcggaggcggcgggggctg 73836
>gb|AC156445.2| Volvox carteri clone JGIAOBO-25P15, complete sequence Length = 31713 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 124 tgccgccgccgctgccggtgctac 147 ||||||||||||||| |||||||| Sbjct: 4180 tgccgccgccgctgctggtgctac 4203
>dbj|AP003331.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1088D01 Length = 146144 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tgccgccgccgctgccggtg 143 |||||||||||||||||||| Sbjct: 87538 tgccgccgccgctgccggtg 87519
>dbj|AP005785.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0453H10 Length = 133464 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ggtcgtcgtcgccggcgtgg 96 |||||||||||||||||||| Sbjct: 81955 ggtcgtcgtcgccggcgtgg 81974
>dbj|AP000366.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0437H03 Length = 170173 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 77 ggtcgtcgtcgccggcgtgg 96 |||||||||||||||||||| Sbjct: 14910 ggtcgtcgtcgccggcgtgg 14929
>dbj|AK107045.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-121-C08, full insert sequence Length = 2127 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tgccgccgccgctgccggtg 143 |||||||||||||||||||| Sbjct: 1192 tgccgccgccgctgccggtg 1173
>dbj|AK100401.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086N19, full insert sequence Length = 2181 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 ggtcgtcgtcgccggcgtgg 96 |||||||||||||||||||| Sbjct: 54 ggtcgtcgtcgccggcgtgg 35
>dbj|AK100207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042A21, full insert sequence Length = 2209 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgacggcggcgcagctggcg 173 |||||||||||||||||||| Sbjct: 574 cgacggcggcgcagctggcg 593
>dbj|AK072256.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009I16, full insert sequence Length = 2021 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tgccgccgccgctgccggtg 143 |||||||||||||||||||| Sbjct: 1211 tgccgccgccgctgccggtg 1192
>dbj|AK071210.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023085L01, full insert sequence Length = 737 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gccgccgccgctgccggtgc 144 |||||||||||||||||||| Sbjct: 497 gccgccgccgctgccggtgc 516
>dbj|AK069047.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009C11, full insert sequence Length = 996 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gccgccgccgctgccggtgc 144 |||||||||||||||||||| Sbjct: 501 gccgccgccgctgccggtgc 520
>ref|NM_024015.4| Homo sapiens homeobox B4 (HOXB4), mRNA Length = 2042 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggc 112 |||||||||||||||||||| Sbjct: 297 gtggcggaggcggcgggggc 278
>ref|NM_006069.2| Homo sapiens murine retrovirus integration site 1 homolog (MRVI1), transcript variant 1, mRNA Length = 3396 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ggagcggggcacgggggcggagga 256 ||||||||||||||||| |||||| Sbjct: 3140 ggagcggggcacgggggaggagga 3163
>ref|NM_130385.1| Homo sapiens murine retrovirus integration site 1 homolog (MRVI1), transcript variant 2, mRNA Length = 3499 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 ggagcggggcacgggggcggagga 256 ||||||||||||||||| |||||| Sbjct: 3243 ggagcggggcacgggggaggagga 3266
>gb|AE003552.4| Drosophila melanogaster chromosome 3L, section 33 of 83 of the complete sequence Length = 286770 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 tgccgccgccgctgccggtg 143 |||||||||||||||||||| Sbjct: 282914 tgccgccgccgctgccggtg 282895
>gb|AC006123.1|AC006123 Homo sapiens chromosome 19, cosmid R28177, complete sequence Length = 45858 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggctggg 116 |||| ||||||||||||||||||| Sbjct: 43283 gtggaggaggcggcgggggctggg 43260
>gb|BC049204.1| Homo sapiens homeobox B4, mRNA (cDNA clone MGC:54130 IMAGE:5533346), complete cds Length = 2040 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggc 112 |||||||||||||||||||| Sbjct: 297 gtggcggaggcggcgggggc 278
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 cgtcgtcgccggcgtggcgg 99 |||||||||||||||||||| Sbjct: 2415060 cgtcgtcgccggcgtggcgg 2415041
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 cgacggcggcgcagctggcg 173 |||||||||||||||||||| Sbjct: 6293925 cgacggcggcgcagctggcg 6293944
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 gccgccgccgctgccggtgc 144 |||||||||||||||||||| Sbjct: 21662596 gccgccgccgctgccggtgc 21662615 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 gggtgccgccgccgctgccg 140 |||||||||||||||||||| Sbjct: 8760418 gggtgccgccgccgctgccg 8760437
>emb|AL731747.2|CNS08C7W Oryza sativa chromosome 12, . BAC OSJNBa0024C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 186030 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 125 gccgccgccgctgccggtgc 144 |||||||||||||||||||| Sbjct: 78300 gccgccgccgctgccggtgc 78281
>emb|AL928776.4|CNS08CC6 Oryza sativa chromosome 12, . BAC OSJNBa0036A15 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 195500 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 gggtgccgccgccgctgccg 140 |||||||||||||||||||| Sbjct: 81634 gggtgccgccgccgctgccg 81615
>gb|BC028050.1| Homo sapiens CREB regulated transcription coactivator 1, transcript variant 1, mRNA (cDNA clone MGC:39876 IMAGE:4938995), complete cds Length = 2505 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggctggg 116 |||| ||||||||||||||||||| Sbjct: 1143 gtggaggaggcggcgggggctggg 1120
>gb|AC003107.1|AC003107 Human DNA from chromosome 19-specific cosmid R30064 containing the COMP gene, genomic sequence, complete sequence Length = 46275 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggctggg 116 |||| ||||||||||||||||||| Sbjct: 9405 gtggaggaggcggcgggggctggg 9382
>gb|BC023614.2| Homo sapiens CREB regulated transcription coactivator 1, mRNA (cDNA clone IMAGE:4646599), partial cds Length = 2435 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggctggg 116 |||| ||||||||||||||||||| Sbjct: 1034 gtggaggaggcggcgggggctggg 1011
>gb|BC017075.2| Homo sapiens CREB regulated transcription coactivator 1, mRNA (cDNA clone MGC:9673 IMAGE:3846137), complete cds Length = 2076 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggctggg 116 |||| ||||||||||||||||||| Sbjct: 692 gtggaggaggcggcgggggctggg 669
>ref|NM_025021.1| Homo sapiens CREB regulated transcription coactivator 1 (CRTC1), transcript variant 2, mRNA Length = 2342 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggctggg 116 |||| ||||||||||||||||||| Sbjct: 1211 gtggaggaggcggcgggggctggg 1188
>ref|NM_015321.1| Homo sapiens CREB regulated transcription coactivator 1 (CRTC1), transcript variant 1, mRNA Length = 2505 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggctggg 116 |||| ||||||||||||||||||| Sbjct: 1143 gtggaggaggcggcgggggctggg 1120
>gb|M30949.1|ORARGIT Orangutan rRNA gene internal transcribed spacer 1 (ITS1) Length = 1070 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 89 cggcgtggcggaggcggcgggggc 112 |||||||||||||||| ||||||| Sbjct: 455 cggcgtggcggaggcgacgggggc 432
>gb|M12780.1|YSCPABPG Yeast (S.cerevisiae) polyadenylate-binding protein gene, complete cds Length = 3436 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gtgccgccgccgctgccggt 142 |||||||||||||||||||| Sbjct: 2138 gtgccgccgccgctgccggt 2157
>dbj|AB014516.1| Homo sapiens mRNA for KIAA0616 protein, partial cds Length = 6718 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 93 gtggcggaggcggcgggggctggg 116 |||| ||||||||||||||||||| Sbjct: 1124 gtggaggaggcggcgggggctggg 1101 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,588,331 Number of Sequences: 3902068 Number of extensions: 2588331 Number of successful extensions: 94354 Number of sequences better than 10.0: 141 Number of HSP's better than 10.0 without gapping: 146 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 91248 Number of HSP's gapped (non-prelim): 3106 length of query: 257 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 235 effective length of database: 17,147,199,772 effective search space: 4029591946420 effective search space used: 4029591946420 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
