>MAN1_HUMAN (Q9Y2U8) Inner nuclear membrane protein Man1 (LEM domain containing|
           protein 3)
          Length = 911

 Score = 28.9 bits (63), Expect = 3.0
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -2

Query: 207 AETGPAAATCACFGARPADGEISSAR 130
           A  GPAAA  A  G RP  G++S  R
Sbjct: 77  AAAGPAAAAAAGMGVRPVSGDLSYLR 102

>HUPE_AZOCH (P42034) Hydrogenase expression/formation protein hupE|
          Length = 341

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 85  PTEKAERKNDVRRRHPSGADLAVGG 159
           P E+AER  +V R HP G + A+ G
Sbjct: 283 PAEQAERLLEVMREHPQGREAAIIG 307

>NIT2_NEUCR (P19212) Nitrogen catabolic enzyme regulatory protein|
          Length = 1036

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 20/89 (22%), Positives = 31/89 (34%)
 Frame = +2

Query: 122  GAILAELISPSAGRAPKQAQVAAAGPVSANKDGKSKGHKHNKYGSVAXXXXXXXXXXXXX 301
            GA+  + + P A   PK A    AG +S      SK  +  ++   A             
Sbjct: 884  GAVGGKSVIPIASAPPKSAPGPGAGSMSRRDTISSK--RQRRHSKSAGSDQPVSAGAVSS 941

Query: 302  XXRQAEEDADDHVVFACKPAFSPGPAYDG 388
                 +  A+        P F+PG A+ G
Sbjct: 942  SGMDVDSPANSTGSNETMPTFNPGGAFSG 970

>AFSK_STRGR (P54742) Serine/threonine protein kinase afsK (EC 2.7.11.1)|
          Length = 807

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +2

Query: 341 VFACKPAFSPGPAYDGG 391
           VF   PAF+PGPA  GG
Sbjct: 644 VFLSPPAFAPGPAVTGG 660

>SPA_STAAN (P99134) Immunoglobulin G binding protein A precursor (IgG binding|
           protein A) (Staphylococcal protein A)
          Length = 450

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +2

Query: 128 ILAELISPSAGRAPKQAQVAAAGPVSANKDGKSKGHKHNK 247
           ILAE    +  +APK+      G    NK GK  G+K  K
Sbjct: 255 ILAEAKKLNDAQAPKEEDNKKPGKEDGNKPGKEDGNKPGK 294

>SPA_STAAM (P0A015) Immunoglobulin G binding protein A precursor (IgG binding|
           protein A) (Staphylococcal protein A)
          Length = 450

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +2

Query: 128 ILAELISPSAGRAPKQAQVAAAGPVSANKDGKSKGHKHNK 247
           ILAE    +  +APK+      G    NK GK  G+K  K
Sbjct: 255 ILAEAKKLNDAQAPKEEDNKKPGKEDGNKPGKEDGNKPGK 294

>BASP_BOVIN (P80724) Brain acid soluble protein 1 (BASP1 protein) (Neuronal|
           axonal membrane protein NAP-22) (22 kDa neuronal
           tissue-enriched acidic protein)
          Length = 226

 Score = 27.3 bits (59), Expect = 8.8
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 152 SAGRAPKQAQVAAAGPVSANKDGKSK 229
           + G APK ++  AA P +  KD KSK
Sbjct: 117 TGGDAPKASEAEAAEPAAPTKDDKSK 142


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,552,276
Number of Sequences: 219361
Number of extensions: 528294
Number of successful extensions: 1609
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1608
length of database: 80,573,946
effective HSP length: 112
effective length of database: 56,005,514
effective search space used: 1344132336
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)