ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet62h08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SRS1_ORYSA (P83649) Salt-stress root protein RS1 111 1e-24
2MOAA_ERWCT (Q6D3C7) Molybdenum cofactor biosynthesis protein A 29 6.8
3CAH11_SHEEP (Q95203) Carbonic anhydrase-related protein 2 precur... 28 8.9
4CAH11_HUMAN (O75493) Carbonic anhydrase-related protein 2 precur... 28 8.9

>SRS1_ORYSA (P83649) Salt-stress root protein RS1|
          Length = 204

 Score =  111 bits (277), Expect = 1e-24
 Identities = 66/127 (51%), Positives = 73/127 (57%), Gaps = 2/127 (1%)
 Frame = +1

Query: 91  MTSVWKTKVLPGLSXXXXXXXXXXXXXEFLKSFNXXXXXXXXXXXXTELEPKVVETIEAS 270
           MTSVWKTKVL GL+             EFLKSFN            TELEPKVVE +E+S
Sbjct: 1   MTSVWKTKVLTGLNKLFDKDGKKAAAAEFLKSFNKEEIGKEIDDKKTELEPKVVEVVESS 60

Query: 271 PPE-XXXXXXXXXXXXXXXNSAAVIKFLNEMAKIGFPGAKLVSDAVVKSGTTPLSPPSSY 447
           PPE                N  AV KFL E+AKI FPGAK VSDAV KSGTTPLSP  ++
Sbjct: 61  PPEIKALLKDKKTASKIKKNGPAVTKFLEELAKIDFPGAKPVSDAVAKSGTTPLSPAIAF 120

Query: 448 -LGQVAP 465
            L +VAP
Sbjct: 121 ILEKVAP 127



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>MOAA_ERWCT (Q6D3C7) Molybdenum cofactor biosynthesis protein A|
          Length = 329

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +3

Query: 78  EGEEYDERMEDQGSPRAQQVLRQGWQEGRRRR 173
           EG E   R    G    QQ+L+QGWQ+ +R R
Sbjct: 198 EGGELFRRHHVSGEVIRQQLLQQGWQQQQRAR 229



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>CAH11_SHEEP (Q95203) Carbonic anhydrase-related protein 2 precursor (CARP 2)|
           (CA-RP II) (CA-XI)
          Length = 328

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 456 LSKIRRWRGEGRGAGLDHRVAHQLGSGETNLGHLVKE 346
           LS++R   G   GAG +H++ HQ  S E  L H  +E
Sbjct: 130 LSELRLLFGARDGAGSEHQINHQGFSAEVQLIHFNQE 166



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>CAH11_HUMAN (O75493) Carbonic anhydrase-related protein 2 precursor (CARP-2)|
           (CA-RP II) (CA-XI) (Carbonic anhydrase-related protein
           11) (CARP XI) (CA-RP XI)
          Length = 328

 Score = 28.5 bits (62), Expect = 8.9
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = -2

Query: 456 LSKIRRWRGEGRGAGLDHRVAHQLGSGETNLGHLVKE 346
           LS++R   G   GAG +H++ HQ  S E  L H  +E
Sbjct: 130 LSELRLLFGARDGAGSEHQINHQGFSAEVQLIHFNQE 166


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.309    0.125    0.337 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,044,606
Number of Sequences: 219361
Number of extensions: 845989
Number of successful extensions: 1977
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1956
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1976
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3014947676
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
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