ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet62e07 |
|---|---|
| Clone Library Name | barley_pub |
>PDI_HORVU (P80284) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Endosperm protein E-1) Length = 513 Score = 317 bits (811), Expect = 1e-86 Identities = 156/157 (99%), Positives = 156/157 (99%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 181 GVFTEFSGPEFTNFLEVAEKLRS YDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD Sbjct: 173 GVFTEFSGPEFTNFLEVAEKLRSYYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 232 Query: 182 SKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKAMLFLNFSTGPFESFK 361 SKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKAMLFLNFSTGPFESFK Sbjct: 233 SKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKAMLFLNFSTGPFESFK 292 Query: 362 SAYYGAVEEFSGKDVKFLIGDIESSQGAFQYFGLKVD 472 SAYYGAVEEFSGKDVKFLIGDIESSQGAFQYFGLKVD Sbjct: 293 SAYYGAVEEFSGKDVKFLIGDIESSQGAFQYFGLKVD 329
>PDI_WHEAT (P52589) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| Length = 515 Score = 305 bits (780), Expect = 5e-83 Identities = 149/157 (94%), Positives = 153/157 (97%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 181 GVFTEFSG EFTNFLE+AEKLRSDYDFGHTVHANHLPRGDAAVERP+VRLFKPFDELVVD Sbjct: 174 GVFTEFSGTEFTNFLELAEKLRSDYDFGHTVHANHLPRGDAAVERPLVRLFKPFDELVVD 233 Query: 182 SKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKAMLFLNFSTGPFESFK 361 SKDFDVSALEKFIDASSTPKVV FDKNPDNHPYLLK+FQSNAPKAMLFLNFSTGPFESFK Sbjct: 234 SKDFDVSALEKFIDASSTPKVVTFDKNPDNHPYLLKYFQSNAPKAMLFLNFSTGPFESFK 293 Query: 362 SAYYGAVEEFSGKDVKFLIGDIESSQGAFQYFGLKVD 472 SAYYGAVEEFSGKDVKFLIGDIE+SQGAFQY GLK D Sbjct: 294 SAYYGAVEEFSGKDVKFLIGDIEASQGAFQYNGLKED 330
>PDI_MAIZE (P52588) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| Length = 513 Score = 278 bits (711), Expect = 5e-75 Identities = 132/157 (84%), Positives = 145/157 (92%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 181 G+F EFSG EFTNF+EVAEKLRSDYDFGHT+HANHLPRGDAAVERP+VRL KPFDELVVD Sbjct: 170 GIFAEFSGTEFTNFMEVAEKLRSDYDFGHTLHANHLPRGDAAVERPLVRLLKPFDELVVD 229 Query: 182 SKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKAMLFLNFSTGPFESFK 361 SKDFDV+AL KFIDAS+ P+VV FDKNPDNHPYL+KFFQS+APKAMLFLNFSTGPF+SFK Sbjct: 230 SKDFDVAALMKFIDASTIPRVVTFDKNPDNHPYLMKFFQSSAPKAMLFLNFSTGPFDSFK 289 Query: 362 SAYYGAVEEFSGKDVKFLIGDIESSQGAFQYFGLKVD 472 SAY A EEF K++KFLIGDIE+SQGAFQYFGLK D Sbjct: 290 SAYSAAAEEFKDKEIKFLIGDIEASQGAFQYFGLKED 326
>PDI_MEDSA (P29828) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| Length = 512 Score = 212 bits (539), Expect = 4e-55 Identities = 99/155 (63%), Positives = 124/155 (80%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 181 GVF +FSG E+ NF+ +AEKLRSDYDF HT++A HLP+GD++V PVVRLFKPFDEL VD Sbjct: 169 GVFPKFSGEEYDNFIALAEKLRSDYDFAHTLNAKHLPKGDSSVSGPVVRLFKPFDELFVD 228 Query: 182 SKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKAMLFLNFSTGPFESFK 361 SKDF+V ALEKFI+ SSTP V +F+ P NHP+++KFF S KAMLF+NF+T ESFK Sbjct: 229 SKDFNVEALEKFIEESSTPIVTVFNNEPSNHPFVVKFFNSPNAKAMLFINFTTEGAESFK 288 Query: 362 SAYYGAVEEFSGKDVKFLIGDIESSQGAFQYFGLK 466 + Y+ E++ + V FL+GD+ESSQGAFQYFGLK Sbjct: 289 TKYHEVAEQYKQQGVSFLVGDVESSQGAFQYFGLK 323
>PDI_DATGL (Q9XF61) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| Length = 507 Score = 201 bits (512), Expect = 6e-52 Identities = 97/157 (61%), Positives = 121/157 (77%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 181 G+F +FSG EF NF +AEKLRSDY+FGHT+ A LPRG+++V PVVRLFKPFDEL VD Sbjct: 169 GIFPKFSGEEFENFSALAEKLRSDYEFGHTLDAKLLPRGESSVSGPVVRLFKPFDELFVD 228 Query: 182 SKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKAMLFLNFSTGPFESFK 361 +DFDV+ALEK ++ SS P V IFDK+P NHP+++KFF + KAMLFLNF++ ESF+ Sbjct: 229 FQDFDVNALEKLVEESSVPTVTIFDKDPSNHPFVVKFFNNANAKAMLFLNFTSEVVESFR 288 Query: 362 SAYYGAVEEFSGKDVKFLIGDIESSQGAFQYFGLKVD 472 S Y E+ G+ + FLIGD ESSQGAFQYFGL+ D Sbjct: 289 SIYREVAEKNKGEGISFLIGDTESSQGAFQYFGLRDD 325
>PDI_RICCO (Q43116) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| Length = 498 Score = 197 bits (502), Expect = 9e-51 Identities = 91/157 (57%), Positives = 120/157 (76%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 181 GVF +FSG E+ N++ VA+KLRSDY+FGHT+ A HLP+G+++V PVVRLFKPFDEL VD Sbjct: 168 GVFPKFSGEEYENYMSVADKLRSDYEFGHTLDAKHLPQGESSVTGPVVRLFKPFDELFVD 227 Query: 182 SKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKAMLFLNFSTGPFESFK 361 KDF+V ALEKF++ SS P V +F+ +P NHP+++KFF S KAMLF+NF+ +S K Sbjct: 228 FKDFNVDALEKFVEESSMPVVTVFNSDPSNHPFVIKFFNSPDAKAMLFMNFNGEAADSIK 287 Query: 362 SAYYGAVEEFSGKDVKFLIGDIESSQGAFQYFGLKVD 472 S Y +F G+ + L+GD+E+SQGAFQYFGLK D Sbjct: 288 SKYQEVAHQFKGEGIILLLGDVEASQGAFQYFGLKED 324
>PDI1_ARATH (Q9XI01) Probable protein disulfide-isomerase 1 precursor (EC| 5.3.4.1) (PDI 1) Length = 501 Score = 185 bits (470), Expect = 4e-47 Identities = 89/155 (57%), Positives = 113/155 (72%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 181 G+F + SG EF +F+ +AEKLRS+ DF HT A LPRG+++V PVVRLFKPFDE VD Sbjct: 166 GIFPKLSGSEFDSFMAIAEKLRSELDFAHTSDAKLLPRGESSVTGPVVRLFKPFDEQFVD 225 Query: 182 SKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKAMLFLNFSTGPFESFK 361 SKDFD ALEKF+ SS P + +FDK+P+NHPY++KFF+S KAMLF+NF+ ES K Sbjct: 226 SKDFDGEALEKFVKESSIPLITVFDKDPNNHPYVIKFFESTNTKAMLFINFTGEGAESLK 285 Query: 362 SAYYGAVEEFSGKDVKFLIGDIESSQGAFQYFGLK 466 S Y G+ + FL+GD E+SQGAFQYFGL+ Sbjct: 286 SKYREVATSNKGQGLSFLLGDAENSQGAFQYFGLE 320
>PDI2_ARATH (Q9SRG3) Probable protein disulfide-isomerase 2 precursor (EC| 5.3.4.1) (PDI 2) Length = 508 Score = 183 bits (464), Expect = 2e-46 Identities = 90/155 (58%), Positives = 113/155 (72%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 181 GVF + SG EF +F+ +AEKLR+DYDF HT+ A LPRG++ VE P VRLFKPFDEL VD Sbjct: 165 GVFPKLSGDEFDSFMALAEKLRADYDFAHTLDAKFLPRGES-VEGPAVRLFKPFDELFVD 223 Query: 182 SKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKAMLFLNFSTGPFESFK 361 SKDF+ ALEKF+ SS P V +FD +P+NHPY+ KFF+S A KAM+F+NF+ E+ K Sbjct: 224 SKDFNGEALEKFVKESSIPLVTVFDSDPNNHPYVAKFFESPATKAMMFVNFTGATAEALK 283 Query: 362 SAYYGAVEEFSGKDVKFLIGDIESSQGAFQYFGLK 466 S Y + + FL+GD ESSQGAFQYFGL+ Sbjct: 284 SKYREVATSNKDQSLAFLVGDAESSQGAFQYFGLE 318
>PDI_HUMIN (P55059) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| Length = 505 Score = 47.0 bits (110), Expect = 2e-05 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 1/96 (1%) Frame = +2 Query: 41 FLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDE-LVVDSKDFDVSALEKF 217 F +VAEKLR +Y FG + A L + V+ P + L+K FDE V S+ F+V A+EKF Sbjct: 164 FTQVAEKLRDNYPFGSSSDA-ALAEAE-GVKAPAIVLYKDFDEGKAVFSEKFEVEAIEKF 221 Query: 218 IDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKAMLF 325 +TP +I + P+ + + + P A +F Sbjct: 222 AKTGATP--LIGEIGPETYS---DYMSAGIPLAYIF 252 Score = 28.5 bits (62), Expect = 9.1 Identities = 24/92 (26%), Positives = 40/92 (43%), Gaps = 11/92 (11%) Frame = +2 Query: 185 KDFDVSALEKFIDASSTPKVVIF----DKNPDNHPY-------LLKFFQSNAPKAMLFLN 331 K D + L ++DAS +F +K DN+P+ L + AP +L+ + Sbjct: 142 KKADKAVLVAYVDASDKASSEVFTQVAEKLRDNYPFGSSSDAALAEAEGVKAPAIVLYKD 201 Query: 332 FSTGPFESFKSAYYGAVEEFSGKDVKFLIGDI 427 F G + A+E+F+ LIG+I Sbjct: 202 FDEGKAVFSEKFEVEAIEKFAKTGATPLIGEI 233
>PDIA1_PONPY (Q5R5B6) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Prolyl 4-hydroxylase beta subunit) Length = 508 Score = 39.3 bits (90), Expect = 0.005 Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 10/165 (6%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 181 G F + FL+ AE + D FG T +++ + +++ V LFK FDE Sbjct: 159 GFFKDVESDSAKQFLQAAEAI-DDIPFGITSNSDVFSKYQ--LDKDGVVLFKKFDE---- 211 Query: 182 SKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKA---------MLFLNF 334 F + ++ F K+ + P +++F + APK +LFL Sbjct: 212 -------GRNNFEGEVTKENLLDFIKH-NQLPLVIEFTEQTAPKIFGGEIKTHILLFLPK 263 Query: 335 STGPFESFKSAYYGAVEEFSGKDV-KFLIGDIESSQGAFQYFGLK 466 S ++ S + A E F GK + F+ D +Q ++FGLK Sbjct: 264 SVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLK 308
>PDIA1_HUMAN (P07237) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Prolyl 4-hydroxylase beta subunit) (Cellular thyroid hormone-binding protein) (p55) Length = 508 Score = 39.3 bits (90), Expect = 0.005 Identities = 42/165 (25%), Positives = 70/165 (42%), Gaps = 10/165 (6%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 181 G F + FL+ AE + D FG T +++ + +++ V LFK FDE Sbjct: 159 GFFKDVESDSAKQFLQAAEAI-DDIPFGITSNSDVFSKYQ--LDKDGVVLFKKFDE---- 211 Query: 182 SKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKA---------MLFLNF 334 F + ++ F K+ + P +++F + APK +LFL Sbjct: 212 -------GRNNFEGEVTKENLLDFIKH-NQLPLVIEFTEQTAPKIFGGEIKTHILLFLPK 263 Query: 335 STGPFESFKSAYYGAVEEFSGKDV-KFLIGDIESSQGAFQYFGLK 466 S ++ S + A E F GK + F+ D +Q ++FGLK Sbjct: 264 SVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLK 308
>PDIA1_MOUSE (P09103) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Prolyl 4-hydroxylase beta subunit) (Cellular thyroid hormone-binding protein) (p55) (Erp59) Length = 509 Score = 39.3 bits (90), Expect = 0.005 Identities = 43/165 (26%), Positives = 70/165 (42%), Gaps = 10/165 (6%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 181 G F + FL AE + D FG T ++ + +++ V LFK FDE Sbjct: 161 GFFKDVESDSAKQFLLAAEAI-DDIPFGITSNSGVFSKYQ--LDKDGVVLFKKFDE---- 213 Query: 182 SKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKA---------MLFLNF 334 F + K++ F K+ + P +++F + APK +LFL Sbjct: 214 -------GRNNFEGEITKEKLLDFIKH-NQLPLVIEFTEQTAPKIFGGEIKTHILLFLPK 265 Query: 335 STGPFESFKSAYYGAVEEFSGKDV-KFLIGDIESSQGAFQYFGLK 466 S ++ S++ A E F GK + F+ D +Q ++FGLK Sbjct: 266 SVSDYDGKLSSFKRAAEGFKGKILFIFIDSDHTDNQRILEFFGLK 310
>PDIA1_BOVIN (P05307) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| (Prolyl 4-hydroxylase beta subunit) (Cellular thyroid hormone-binding protein) (p55) Length = 510 Score = 38.9 bits (89), Expect = 0.007 Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 10/165 (6%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 181 G F + F AE + D FG T +++ + +++ V LFK FDE Sbjct: 161 GFFKDMESDSAKQFFLAAEVI-DDIPFGITSNSDVFSKYQ--LDKDGVVLFKKFDE---- 213 Query: 182 SKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKA---------MLFLNF 334 F + K++ F K+ + P +++F + APK +LFL Sbjct: 214 -------GRNNFEGEVTKEKLLDFIKH-NQLPLVIEFTEQTAPKIFGGEIKTHILLFLPK 265 Query: 335 STGPFESFKSAYYGAVEEFSGKDV-KFLIGDIESSQGAFQYFGLK 466 S +E S + A E F GK + F+ D +Q ++FGLK Sbjct: 266 SVSDYEGKLSNFKKAAESFKGKILFIFIDSDHTDNQRILEFFGLK 310
>PDI2_CAEEL (Q17770) Protein disulfide-isomerase 2 precursor (EC 5.3.4.1) (PDI| 1) (Prolyl 4-hydroxylase beta subunit) Length = 493 Score = 37.7 bits (86), Expect = 0.015 Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 2/159 (1%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDE-LVV 178 G F + + + FLEVA + D FG + + + ++ + LFK FD+ V Sbjct: 155 GYFKDTTSDDAKTFLEVAAGI-DDVPFG--ISTEDAVKSEIELKGEGIVLFKKFDDGRVA 211 Query: 179 DSKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKAMLFLNFSTGPFESF 358 + L+ +I A+ V F + + + + N +LF++ + F Sbjct: 212 FDEKLTQDGLKTWIQANRLALVSEFTQETASVIFGGEIKSHN----LLFVSKESSEFAKL 267 Query: 359 KSAYYGAVEEFSGKDVKFLIG-DIESSQGAFQYFGLKVD 472 + + A ++F GK + I D+E + ++FGLK D Sbjct: 268 EQEFKNAAKQFKGKVLFVYINTDVEENARIMEFFGLKKD 306
>PDIA2_HUMAN (Q13087) Protein disulfide-isomerase A2 precursor (EC 5.3.4.1)| (PDIp) Length = 525 Score = 34.7 bits (78), Expect = 0.13 Identities = 38/163 (23%), Positives = 65/163 (39%), Gaps = 6/163 (3%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDE---- 169 G F + + FL +A+ D FG T + + + V LFK FDE Sbjct: 177 GFFQDLQDEDVATFLALAQDAL-DMTFGLTDRPRLFQQ--FGLTKDTVVLFKKFDEGRAD 233 Query: 170 -LVVDSKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKAMLFLNFSTGP 346 V + D+ L +F+ S V F+ + + +LF+N + Sbjct: 234 FPVDEELGLDLGDLSRFLVTHSMRLVTEFNSQTSAKIFAARILNH----LLLFVNQTLAA 289 Query: 347 FESFKSAYYGAVEEFSGKDVKFLIGDIES-SQGAFQYFGLKVD 472 + + A F G+ V F++ D+ + ++ QYFGLK + Sbjct: 290 HRELLAGFGEAAPRFRGQ-VLFVVVDVAADNEHVLQYFGLKAE 331
>PDIA2_PONPY (Q5RCH2) Protein disulfide-isomerase A2 precursor (EC 5.3.4.1)| Length = 525 Score = 33.1 bits (74), Expect = 0.37 Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 6/163 (3%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDE---- 169 G F + + FL +A+ D FG T + + + V LFK FDE Sbjct: 177 GFFQDLHDEDVATFLALAQDAL-DMTFGLTDRPQLFQQ--FGLTKDTVVLFKKFDEGRAD 233 Query: 170 -LVVDSKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKAMLFLNFSTGP 346 V + D+ L +F+ S V F+ + + +LF+N + Sbjct: 234 FPVDEELGLDLGDLSRFLVTHSMRLVTEFNSQTSAKIFAARILNH----LLLFVNQTLAA 289 Query: 347 FESFKSAYYGAVEEFSGKDVKFLIGDIES-SQGAFQYFGLKVD 472 + A F G+ V F++ D+ + ++ QYFGLK + Sbjct: 290 HRELLVGFGEAAPHFRGQ-VLFVVVDVAADNEHVLQYFGLKAE 331
>CARB_HELPY (O25577) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1085 Score = 32.7 bits (73), Expect = 0.48 Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 8/103 (7%) Frame = -1 Query: 298 LEEFQEVRMVVRVLIKNNNFRGAASINEFLQSRNIKILAINNELIKWLE*P--------D 143 +EEFQE+ N A+ INE L I L+ W E D Sbjct: 183 IEEFQELA---------KNALDASPINEIL---------IEESLLGWKEYEMEVIRDSKD 224 Query: 142 HWPLHCCITTWEMVGMHSVAKVIIRPQLLSNLKEVRKLRATEF 14 + + CCI + +G+H+ + I P L KE +++R F Sbjct: 225 NCIIVCCIENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDASF 267
>CARB_HELPJ (Q9ZKT2) Carbamoyl-phosphate synthase large chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase ammonia chain) Length = 1085 Score = 32.7 bits (73), Expect = 0.48 Identities = 28/103 (27%), Positives = 42/103 (40%), Gaps = 8/103 (7%) Frame = -1 Query: 298 LEEFQEVRMVVRVLIKNNNFRGAASINEFLQSRNIKILAINNELIKWLE*P--------D 143 +EEFQE+ N A+ INE L I L+ W E D Sbjct: 183 IEEFQELA---------KNALDASPINEIL---------IEESLLGWKEYEMEVIRDGKD 224 Query: 142 HWPLHCCITTWEMVGMHSVAKVIIRPQLLSNLKEVRKLRATEF 14 + + CCI + +G+H+ + I P L KE +++R F Sbjct: 225 NCIIVCCIENIDPMGVHTGDSITIAPSLTLTDKEYQRMRDASF 267
>MCRA_METKA (Q49605) Methyl-coenzyme M reductase I alpha subunit (EC 2.8.4.1)| (Coenzyme-B sulfoethylthiotransferase alpha) (MCR I alpha) Length = 553 Score = 32.7 bits (73), Expect = 0.48 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 4/86 (4%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 181 G+ E GP + N+ L ++ V A H RGDA PV+++ + LV D Sbjct: 468 GLPLELRGPNYPNYAMNVGHLG---EYAGIVQAAHAARGDAFCVHPVIKVAFADENLVFD 524 Query: 182 ----SKDFDVSALEKFIDASSTPKVV 247 K+F AL +F A +V Sbjct: 525 FTEPRKEFAKGALREFEPAGERDLIV 550
>RPOC_TROWT (Q820D6) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1286 Score = 31.2 bits (69), Expect = 1.4 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = +2 Query: 113 RGDAAVERPVVRLFKPFDELVVDSKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYL 283 RGD ++ PV LF +V+D K D + +E ++ + + + PD HPY+ Sbjct: 612 RGDLSISAPVKILFS---NIVLDGKTLDSAVVE-----TTLGRAIFNEALPDGHPYI 660
>RPOC_TROW8 (Q820D9) DNA-directed RNA polymerase beta' chain (EC 2.7.7.6) (RNAP| beta' subunit) (Transcriptase beta' chain) (RNA polymerase beta' subunit) Length = 1286 Score = 31.2 bits (69), Expect = 1.4 Identities = 17/57 (29%), Positives = 29/57 (50%) Frame = +2 Query: 113 RGDAAVERPVVRLFKPFDELVVDSKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYL 283 RGD ++ PV LF +V+D K D + +E ++ + + + PD HPY+ Sbjct: 612 RGDLSISAPVKILFS---NIVLDGKTLDSAVVE-----TTLGRAIFNEALPDGHPYI 660
>ATG22_YEAST (P25568) Autophagy-related protein 22| Length = 528 Score = 30.8 bits (68), Expect = 1.8 Identities = 13/21 (61%), Positives = 15/21 (71%) Frame = -2 Query: 315 ALGALLWKNFKRYGWLSGFLS 253 ALG L WKN+ YGW+S F S Sbjct: 289 ALGQLNWKNYLSYGWVSLFES 309
>MCRA_METTM (P11558) Methyl-coenzyme M reductase I alpha subunit (EC 2.8.4.1)| (Coenzyme-B sulfoethylthiotransferase alpha) (MCR I alpha) Length = 549 Score = 30.8 bits (68), Expect = 1.8 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 4/76 (5%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 181 G+ E GP + N+ A + ++ A H RGDA V P+V++ D LV D Sbjct: 464 GLPLELRGPNYPNY---AMNVGHQGEYAGISQAPHAARGDAFVFNPLVKIAFADDNLVFD 520 Query: 182 ----SKDFDVSALEKF 217 +F AL +F Sbjct: 521 FTNVRGEFAKGALREF 536
>MCRA_METTH (O27232) Methyl-coenzyme M reductase alpha subunit (EC 2.8.4.1)| (Coenzyme-B sulfoethylthiotransferase alpha) Length = 549 Score = 30.8 bits (68), Expect = 1.8 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 4/76 (5%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 181 G+ E GP + N+ A + ++ A H RGDA V P+V++ D LV D Sbjct: 464 GLPLELRGPNYPNY---AMNVGHQGEYAGISQAPHAARGDAFVFNPLVKIAFADDNLVFD 520 Query: 182 ----SKDFDVSALEKF 217 +F AL +F Sbjct: 521 FTNVRGEFAKGALREF 536
>MCRX_METJA (Q60391) Methyl-coenzyme M reductase II alpha subunit (EC 2.8.4.1)| (Coenzyme-B sulfoethylthiotransferase alpha) (MCR II alpha) Length = 552 Score = 30.4 bits (67), Expect = 2.4 Identities = 17/62 (27%), Positives = 28/62 (45%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVD 181 G+ E GP + N+ A + ++ A H RGDA P++++ D L+ D Sbjct: 467 GLLHECRGPNYPNY---AMNVGHQPEYAGIAQAPHAARGDAFCLNPIIKVAFADDNLIFD 523 Query: 182 SK 187 K Sbjct: 524 FK 525
>Y331_MYCGE (P47573) Hypothetical protein MG331| Length = 212 Score = 30.4 bits (67), Expect = 2.4 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 11/64 (17%) Frame = +2 Query: 146 RLFKPFDELVVDSKDFDVSALEKFID-----------ASSTPKVVIFDKNPDNHPYLLKF 292 +LFK EL+VD K+ D LE+ +D +S + DK + +L KF Sbjct: 68 KLFKTLQELIVDLKNTDFKLLEEKVDRMWLNAAYNQTSSGYESWISDDKGIEKINHLSKF 127 Query: 293 FQSN 304 +++N Sbjct: 128 YEAN 131
>PDI_ASPNG (Q12730) Protein disulfide-isomerase precursor (EC 5.3.4.1) (PDI)| Length = 515 Score = 30.0 bits (66), Expect = 3.1 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%) Frame = +2 Query: 41 FLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDE-LVVDSKDFDVSALEKF 217 F + AE R +Y F T A VE+P + L+K FDE V + + A+ + Sbjct: 168 FEKYAESQRDNYLFAATDDAAIAK--SEGVEQPSIVLYKDFDEKKAVYDGEIEQEAIHSW 225 Query: 218 IDASSTPKV 244 + ++STP V Sbjct: 226 VKSASTPLV 234
>PDIA4_HUMAN (P13667) Protein disulfide-isomerase A4 precursor (EC 5.3.4.1)| (Protein ERp-72) (ERp72) Length = 645 Score = 30.0 bits (66), Expect = 3.1 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHT 91 GVF S P + + + A LR DY F HT Sbjct: 310 GVFKGESDPAYQQYQDAANNLREDYKFHHT 339
>IOD2_CHICK (Q9IAX2) Type II iodothyronine deiodinase (EC 1.97.1.10) (Type-II| 5'deiodinase) (DIOII) (Type 2 DI) (5DII) Length = 279 Score = 29.6 bits (65), Expect = 4.1 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = +2 Query: 278 YLLKFFQSNAPKAMLFLNFSTGPFESFKSAYYGAVEEFSG 397 +LL F S P + F + + PF S SA+ VEEFSG Sbjct: 112 HLLDFANSERPLVVNFGSATCPPFTSQLSAFSKLVEEFSG 151
>POL1_TORVR (P29150) RNA1 polyprotein (P1) [Contains: X1 protein; X2 protein;| Putative ATP-dependent helicase (EC 3.6.1.-) (NTP-binding protein) (NTB) (Membrane-binding protein); Viral genome-linked protein (VPg); Picornain 3C-like protease (EC 3.4.22.-) Length = 2197 Score = 29.6 bits (65), Expect = 4.1 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 5/67 (7%) Frame = +2 Query: 242 VVIFDKNPDNHPYLLKFFQSNAPKAMLFLNFSTGP-----FESFKSAYYGAVEEFSGKDV 406 +V D N + L FFQ P FL F G SA GA + + KDV Sbjct: 1296 IVYTDNNGNTKAPLTHFFQPTGPNGEHFLRFFNGTEVCIYSHPQLSALPGAPQNYFLKDV 1355 Query: 407 KFLIGDI 427 + + GDI Sbjct: 1356 EKISGDI 1362
>MAL1_DROME (P07191) Probable maltase D precursor (EC 3.2.1.20) (Larval| visceral protein D) Length = 567 Score = 29.6 bits (65), Expect = 4.1 Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 3/104 (2%) Frame = +2 Query: 137 PVVRLFKPFDELVVDSKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYLLKFFQSNAPKA 316 P+ + FD+L+V++K V + F+ S+ + V F+K+ + F+ + K Sbjct: 95 PIFGTLEDFDDLIVEAKSLGVKIILDFVPNHSSDENVWFEKSVNREDGYDDFYVWDDGK- 153 Query: 317 MLFLNFSTG---PFESFKSAYYGAVEEFSGKDVKFLIGDIESSQ 439 LN TG P ++ S + G + ++ K ++ + + Q Sbjct: 154 ---LNEETGARDPPSNWVSVFSGPMWTWNEKRQQYFLHQFQVKQ 194
>ZCH12_RAT (Q5HZA3) Zinc finger CCHC domain-containing protein 12| Length = 401 Score = 29.3 bits (64), Expect = 5.3 Identities = 19/80 (23%), Positives = 37/80 (46%) Frame = +2 Query: 38 NFLEVAEKLRSDYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVDSKDFDVSALEKF 217 NFLE+ +R + ++ PR +VER + F+ +++ S D +V ++ Sbjct: 208 NFLELIRMIREEEEWEEAFIHPKRPRRSQSVERALSPTFQSSPPVMISSIDCNVIEIDDS 267 Query: 218 IDASSTPKVVIFDKNPDNHP 277 D S +++ PD+ P Sbjct: 268 PDDSDEDVILV---EPDDPP 284
>YR880_MIMIV (Q5UQX8) Putative ankyrin repeat protein R880| Length = 255 Score = 29.3 bits (64), Expect = 5.3 Identities = 13/45 (28%), Positives = 27/45 (60%) Frame = +2 Query: 86 HTVHANHLPRGDAAVERPVVRLFKPFDELVVDSKDFDVSALEKFI 220 +T+ + +G+ V R + +LF+ DELV+ +K F+ S + ++ Sbjct: 41 NTIIKKIIKKGELGVIRYINKLFRVNDELVIGNKLFESSGINNYL 85
>CARA_BACHK (Q6HES7) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase glutamine chain) Length = 365 Score = 28.9 bits (63), Expect = 6.9 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Frame = -1 Query: 295 EEFQEVRMVVRVLIKN------NNFRGAASINEFLQSRNIKILA 182 ++F+ + V LI N +NFR S+N++L+ RNI LA Sbjct: 66 DDFESIHPSVNGLIVNEICDHPSNFRNEISLNDYLKERNIPGLA 109
>CARA_BACCR (Q819S2) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase glutamine chain) Length = 365 Score = 28.9 bits (63), Expect = 6.9 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Frame = -1 Query: 295 EEFQEVRMVVRVLIKN------NNFRGAASINEFLQSRNIKILA 182 ++F+ + V LI N +NFR S+N++L+ RNI LA Sbjct: 66 DDFESIHPSVNGLIVNEICNHPSNFRNEISLNDYLKERNIPGLA 109
>CARA_BACC1 (Q732I2) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase glutamine chain) Length = 365 Score = 28.9 bits (63), Expect = 6.9 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Frame = -1 Query: 295 EEFQEVRMVVRVLIKN------NNFRGAASINEFLQSRNIKILA 182 ++F+ + V LI N +NFR S+N++L+ RNI LA Sbjct: 66 DDFESIHPSVNGLIVNEICDHPSNFRNEISLNDYLKERNIPGLA 109
>CARA_BACAN (Q81WF1) Carbamoyl-phosphate synthase small chain (EC 6.3.5.5)| (Carbamoyl-phosphate synthetase glutamine chain) Length = 365 Score = 28.9 bits (63), Expect = 6.9 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 6/44 (13%) Frame = -1 Query: 295 EEFQEVRMVVRVLIKN------NNFRGAASINEFLQSRNIKILA 182 ++F+ + V LI N +NFR S+N++L+ RNI LA Sbjct: 66 DDFESIHPSVNGLIVNEICDHPSNFRNEISLNDYLKERNIPGLA 109
>LGRB_BREPA (Q70LM6) Linear gramicidin synthetase subunit B [Includes:| ATP-dependent alanine adenylase (AlaA) (Alanine activase); ATP-dependent D-leucine adenylase (D-LeuA) (D-leucine activase); Leucine racemase [ATP-hydrolyzing] (EC 5.1.1.-); ATP-depende Length = 5162 Score = 28.9 bits (63), Expect = 6.9 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = +2 Query: 86 HTVHANHLPRGDAAVERPVVRLFKPFDELVVDSKDFDVSALEKFIDASS 232 +T + LP+G V R +VRL K D + + +D + A DA++ Sbjct: 4243 YTSGSTGLPKGTLVVHRGIVRLVKETDYVTITEQDVFLQASTVSFDAAT 4291
>FGD5_MOUSE (Q80UZ0) FYVE, RhoGEF and PH domain-containing protein 5| Length = 1219 Score = 28.9 bits (63), Expect = 6.9 Identities = 23/92 (25%), Positives = 37/92 (40%) Frame = +2 Query: 101 NHLPRGDAAVERPVVRLFKPFDELVVDSKDFDVSALEKFIDASSTPKVVIFDKNPDNHPY 280 +HLP + VV + PFD + K S+ ID + K K+ Sbjct: 354 SHLPSSGTSTPSSVVDIPPPFDLACITKKPITKSSPSLLIDGDTLEKASKKKKSSFKRFL 413 Query: 281 LLKFFQSNAPKAMLFLNFSTGPFESFKSAYYG 376 L F + K + +N S+ S +S+Y+G Sbjct: 414 ELTFRKKTESKVHVDMNLSSSR-SSSESSYHG 444
>ULA1_BRARE (Q7SXP2) NEDD8-activating enzyme E1 regulatory subunit (Amyloid| protein-binding protein 1) (APP-BP1) Length = 533 Score = 28.5 bits (62), Expect = 9.1 Identities = 24/73 (32%), Positives = 38/73 (52%) Frame = +2 Query: 86 HTVHANHLPRGDAAVERPVVRLFKPFDELVVDSKDFDVSALEKFIDASSTPKVVIFDKNP 265 HTV +H D A+E +RL +PF EL + +D+ +EK D S TP +++ + Sbjct: 168 HTVVESH---PDNALED--LRLDQPFTELKRHVESYDLDNMEK-KDHSHTPWIIVVAR-- 219 Query: 266 DNHPYLLKFFQSN 304 YL K++ N Sbjct: 220 ----YLEKWYNEN 228
>Y575_METJA (Q57995) Hypothetical protein MJ0575| Length = 229 Score = 28.5 bits (62), Expect = 9.1 Identities = 16/48 (33%), Positives = 29/48 (60%) Frame = +2 Query: 140 VVRLFKPFDELVVDSKDFDVSALEKFIDASSTPKVVIFDKNPDNHPYL 283 + ++ KP D+L+VD +F LEK +A ++++ ++PDN YL Sbjct: 32 IYKINKP-DDLIVDDIEFPDELLEKIKEADI---LLLYTQHPDNTYYL 75
>PDIA4_RAT (P38659) Protein disulfide-isomerase A4 precursor (EC 5.3.4.1)| (Protein ERp-72) (ERp72) (Calcium-binding protein 2) (CaBP2) Length = 643 Score = 28.5 bits (62), Expect = 9.1 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = +2 Query: 2 GVFTEFSGPEFTNFLEVAEKLRSDYDFGHT 91 GVF P + + + A LR DY F HT Sbjct: 308 GVFQGVGDPGYLQYQDAANTLREDYKFHHT 337
>PEBA_SYNPX (Q7U4P7) 15,16-dihydrobiliverdin:ferredoxin oxidoreductase (EC| 1.3.7.2) Length = 235 Score = 28.5 bits (62), Expect = 9.1 Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 9/143 (6%) Frame = +2 Query: 71 DYDFGHTVHANHLPRGDAAVERPVVRLFKPFDELVVDSKDF---------DVSALEKFID 223 D+D H + L A + V F+P +V KD+ D++A +F D Sbjct: 73 DFDLDHPLMGVDLLWFGARQKLVAVLDFQP----LVQDKDYLDRHFDGLKDLNA--RFPD 126 Query: 224 ASSTPKVVIFDKNPDNHPYLLKFFQSNAPKAMLFLNFSTGPFESFKSAYYGAVEEFSGKD 403 + + FD N +LL F + + +A L + F +F AY+G +E S + Sbjct: 127 LNGEETMRSFDPNQYFSSWLL-FCRGGSEEADRSLPKA---FSAFLKAYWGLHDEASKEP 182 Query: 404 VKFLIGDIESSQGAFQYFGLKVD 472 GD+E Q A+ + + D Sbjct: 183 SSISPGDVERLQNAYDVYSAERD 205 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,785,753 Number of Sequences: 219361 Number of extensions: 1299091 Number of successful extensions: 4345 Number of sequences better than 10.0: 43 Number of HSP's better than 10.0 without gapping: 4271 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4341 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
