Clone Information

BLAST Search Result

Clone Name	baet62d11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	STO_ARATH (Q96288) Salt-tolerance protein	97	7e-21
2	STHY_ARATH (Q9SYM2) Putative salt tolerance-like protein At1g78600	96	3e-20
3	STH_ARATH (Q9SID1) Salt tolerance-like protein	96	3e-20
4	STHX_ARATH (Q9LQZ7) Putative salt tolerance-like protein At1g75540	94	6e-20
5	COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2	57	1e-08
6	COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15	56	2e-08
7	CONS_ARATH (Q39057) Zinc finger protein CONSTANS	55	3e-08
8	COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13	54	7e-08
9	COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3	54	1e-07
10	COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1	53	2e-07
11	COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14	52	3e-07
12	COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9	52	3e-07
13	COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4	52	5e-07
14	COLX_ARATH (Q9C9F4) Putative zinc finger protein At1g68190	51	6e-07
15	COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5	51	8e-07
16	COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11	49	2e-06
17	COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10	49	3e-06
18	COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8	44	9e-05
19	COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6	44	1e-04
20	COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16	44	1e-04
21	COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12	41	6e-04
22	COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7	40	0.002
23	ARD1_CAEEL (Q09654) Putative GTP-binding protein ard-1 homolog	35	0.034
24	ARD1_MOUSE (Q8BGX0) GTP-binding protein ARD-1 (ADP-ribosylation ...	32	0.28
25	ARD1_RAT (P36407) GTP-binding protein ARD-1 (ADP-ribosylation fa...	32	0.28
26	KE4_MOUSE (Q31125) Zinc transporter SLC39A7 (Solute carrier fami...	32	0.28
27	ARD1_HUMAN (P36406) GTP-binding protein ARD-1 (ADP-ribosylation ...	32	0.37
28	TRIM9_RAT (Q91ZY8) Tripartite motif protein 9 (SNAP-25-interacti...	32	0.37
29	TRIM9_HUMAN (Q9C026) Tripartite motif protein 9 (RING finger pro...	32	0.37
30	TRPD2_STRCO (Q9Z4W9) Anthranilate phosphoribosyltransferase 2 (E...	32	0.37
31	TRIM9_MOUSE (Q8C7M3) Tripartite motif protein 9	32	0.37
32	ZFYV1_HUMAN (Q9HBF4) Zinc finger FYVE domain-containing protein ...	30	1.8
33	Y855_TREPA (O83827) Hypothetical protein TP0855 precursor	29	2.4
34	DH11_GOSHI (P09442) Late embryogenesis abundant protein D-11 (LE...	28	4.1
35	GCR_XENLA (P49844) Glucocorticoid receptor (GR)	28	4.1
36	GCR_MOUSE (P06537) Glucocorticoid receptor (GR)	28	4.1
37	GCR_RABIT (P59667) Glucocorticoid receptor (GR)	28	5.4
38	TRI25_MOUSE (Q61510) Tripartite motif protein 25 (Zinc finger pr...	28	7.0
39	RNF31_HUMAN (Q96EP0) RING finger protein 31 (Zinc in-between-RIN...	28	7.0
40	CHIS_BACCI (P33673) Chitosanase precursor (EC 3.2.1.132)	27	9.2
41	MUTS_LACJO (P61668) DNA mismatch repair protein mutS	27	9.2
42	COBL8_ARATH (Q9LIB6) COBRA-like protein 8 precursor	27	9.2
43	TRI47_HUMAN (Q96LD4) Tripartite motif protein 47 (Gene overexpre...	27	9.2

>STO_ARATH (Q96288) Salt-tolerance protein|
          Length = 248

 Score = 97.4 bits (241), Expect = 7e-21
 Identities = 44/81 (54%), Positives = 56/81 (69%)
 Frame = +2

Query: 140 MRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGP 319
           M++QCDVC   PA V+CCADEAALC  C+  +H ANKLA KH+RL L  L     +   P
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSL-----STKFP 55

Query: 320 LCDVCKERRGLVFCVEDRAIL 382
            CD+C+E+   +FCVEDRA+L
Sbjct: 56  RCDICQEKAAFIFCVEDRALL 76



 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +2

Query: 149 QCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRR 271
           +CD+C  + A + C  D A LC  C+  +H AN  +  H+R
Sbjct: 56  RCDICQEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQR 96

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>STHY_ARATH (Q9SYM2) Putative salt tolerance-like protein At1g78600|
          Length = 299

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 42/81 (51%), Positives = 58/81 (71%)
 Frame = +2

Query: 140 MRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGP 319
           M++QC+VC    A VLCCADEAALC  C+ ++H ANKLAGKH+R+ L     +  A++ P
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPL-----SASASSIP 55

Query: 320 LCDVCKERRGLVFCVEDRAIL 382
            CD+C+E  G  FC++DRA+L
Sbjct: 56  KCDICQEASGFFFCLQDRALL 76



 Score = 36.2 bits (82), Expect = 0.020
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 1/66 (1%)
 Frame = +2

Query: 125 SRSIAMRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGD 304
           S S +   +CD+C        C  D A LC  C+  +H  N     H+R  L  +    +
Sbjct: 48  SASASSIPKCDICQEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLE 107

Query: 305 AA-TGP 319
           +  TGP
Sbjct: 108 SIDTGP 113

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>STH_ARATH (Q9SID1) Salt tolerance-like protein|
          Length = 238

 Score = 95.5 bits (236), Expect = 3e-20
 Identities = 44/81 (54%), Positives = 56/81 (69%)
 Frame = +2

Query: 140 MRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGP 319
           M++QCDVC   PA ++CCADEAALC+ C+  VH ANKLA KH+RL L  L     +   P
Sbjct: 1   MKIQCDVCEKAPATLICCADEAALCAKCDVEVHAANKLASKHQRLFLDSL-----STKFP 55

Query: 320 LCDVCKERRGLVFCVEDRAIL 382
            CD+C E+   +FCVEDRA+L
Sbjct: 56  PCDICLEKAAFIFCVEDRALL 76



 Score = 37.4 bits (85), Expect = 0.009
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRR 271
           CD+C  + A + C  D A LC  C+   H  N  +  H+R
Sbjct: 57  CDICLEKAAFIFCVEDRALLCRDCDEATHAPNTRSANHQR 96

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>STHX_ARATH (Q9LQZ7) Putative salt tolerance-like protein At1g75540|
          Length = 331

 Score = 94.4 bits (233), Expect = 6e-20
 Identities = 41/81 (50%), Positives = 59/81 (72%)
 Frame = +2

Query: 140 MRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGP 319
           M+++CDVC  E A+V C ADEA+LC  C+ +VH ANKLA KH R +LL   ++    + P
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSN--TSSP 58

Query: 320 LCDVCKERRGLVFCVEDRAIL 382
           LCD+C++++ L+FC +DRAIL
Sbjct: 59  LCDICQDKKALLFCQQDRAIL 79



 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTL 280
           CD+C  + A + C  D A LC  C+  +H AN+   KH R  L
Sbjct: 60  CDICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLL 102

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>COL2_ARATH (Q96502) Zinc finger protein CONSTANS-LIKE 2|
          Length = 347

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 30/68 (44%), Positives = 41/68 (60%)
 Frame = +2

Query: 116 RRASRSIAMRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDA 295
           R ASR   +RV C  C   PAA LC AD A+LC+ C+  +H AN LA +H+R+ +L L A
Sbjct: 48  RVASRHERVRV-CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPILPLSA 106

Query: 296 AGDAATGP 319
              ++  P
Sbjct: 107 NSCSSMAP 114



 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAA------T 313
           CD C      V C AD A LC+ C+ RVH AN++A +H R+ + Q   +  AA       
Sbjct: 16  CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPAAFLCKADA 75

Query: 314 GPLCDVC 334
             LC  C
Sbjct: 76  ASLCTAC 82

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>COL15_ARATH (Q9C7E8) Zinc finger protein CONSTANS-LIKE 15|
          Length = 433

 Score = 55.8 bits (133), Expect = 2e-08
 Identities = 32/84 (38%), Positives = 39/84 (46%)
 Frame = +2

Query: 131 SIAMRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAA 310
           S + RV CD CG   A + C AD A LC PC+++VH AN L+ KH R             
Sbjct: 2   SSSERVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVR------------- 48

Query: 311 TGPLCDVCKERRGLVFCVEDRAIL 382
              +CD C      V C  D  IL
Sbjct: 49  -SQICDNCGNEPVSVRCFTDNLIL 71



 Score = 37.4 bits (85), Expect = 0.009
 Identities = 16/40 (40%), Positives = 21/40 (52%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRR 271
           CD CG EP +V C  D   LC  C+  VH +  ++  H R
Sbjct: 52  CDNCGNEPVSVRCFTDNLILCQECDWDVHGSCSVSDAHVR 91

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>CONS_ARATH (Q39057) Zinc finger protein CONSTANS|
          Length = 373

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 28/58 (48%), Positives = 39/58 (67%)
 Frame = +2

Query: 116 RRASRSIAMRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQL 289
           R ASR   +RV C+ C   PAA LC AD+A+LC+ C+  VH AN LA +H+R+ +L +
Sbjct: 52  RVASRHKRVRV-CESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQRVPILPI 108



 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 24/77 (31%), Positives = 34/77 (44%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 331
           CD C      V C AD A LC  C+ +VH AN++A +H+R+               +C+ 
Sbjct: 20  CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVR--------------VCES 65

Query: 332 CKERRGLVFCVEDRAIL 382
           C+       C  D A L
Sbjct: 66  CERAPAAFLCEADDASL 82

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>COL13_ARATH (O82256) Zinc finger protein CONSTANS-LIKE 13|
          Length = 332

 Score = 54.3 bits (129), Expect = 7e-08
 Identities = 29/77 (37%), Positives = 37/77 (48%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 331
           CD C    A V C AD A LC  C+++VH AN+L  KH R                LCD 
Sbjct: 13  CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFR--------------SLLCDS 58

Query: 332 CKERRGLVFCVEDRAIL 382
           C E    +FC  +R++L
Sbjct: 59  CNESPSSLFCETERSVL 75



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRAN 247
           CD C   P+++ C  + + LC  C+ + H A+
Sbjct: 56  CDSCNESPSSLFCETERSVLCQNCDWQHHTAS 87

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>COL3_ARATH (Q9SK53) Zinc finger protein CONSTANS-LIKE 3|
          Length = 294

 Score = 53.5 bits (127), Expect = 1e-07
 Identities = 28/77 (36%), Positives = 37/77 (48%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 331
           CD C    A + C AD A LC  C+ ++H ANKLA +H R+               LC+V
Sbjct: 8   CDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVW--------------LCEV 53

Query: 332 CKERRGLVFCVEDRAIL 382
           C++    V C  D A L
Sbjct: 54  CEQAPAHVTCKADAAAL 70



 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQL-DAAGDA 307
           C+VC   PA V C AD AALC  C+R +H AN L+ +H R+ +    DA G A
Sbjct: 51  CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPITPFYDAVGPA 103

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>COL1_ARATH (O50055) Zinc finger protein CONSTANS-LIKE 1|
          Length = 355

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
 Frame = +2

Query: 116 RRASRSIAMRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLD- 292
           R ASR   +RV C  C   PAA  C AD A+LC+ C+  +H AN LA +H+R+ +L +  
Sbjct: 44  RLASRHERVRV-CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPILPISE 102

Query: 293 -AAGDAATGPLCD 328
            +    AT   C+
Sbjct: 103 YSYSSTATNHSCE 115



 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 27/77 (35%), Positives = 34/77 (44%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 331
           CD C      V C AD A LCS C+ +VH AN+LA +H R+               +C  
Sbjct: 12  CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVR--------------VCQS 57

Query: 332 CKERRGLVFCVEDRAIL 382
           C+      FC  D A L
Sbjct: 58  CERAPAAFFCKADAASL 74

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>COL14_ARATH (O22800) Zinc finger protein CONSTANS-LIKE 14|
          Length = 402

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 28/79 (35%), Positives = 36/79 (45%)
 Frame = +2

Query: 146 VQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLC 325
           V C+ CG   A + C AD A LC PC++ VH AN L+ KH R                +C
Sbjct: 10  VACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVR--------------SQIC 55

Query: 326 DVCKERRGLVFCVEDRAIL 382
           D C +    V C  D  +L
Sbjct: 56  DNCSKEPVSVRCFTDNLVL 74



 Score = 36.2 bits (82), Expect = 0.020
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRR 271
           CD C  EP +V C  D   LC  C+  VH +   +  H R
Sbjct: 55  CDNCSKEPVSVRCFTDNLVLCQECDWDVHGSCSSSATHER 94

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>COL9_ARATH (Q9SSE5) Zinc finger protein CONSTANS-LIKE 9|
          Length = 372

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 28/81 (34%), Positives = 38/81 (46%)
 Frame = +2

Query: 140 MRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGP 319
           M   CD CG + + V C +D A LC  C+R VH AN L+ +H R                
Sbjct: 1   MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTL-------------- 46

Query: 320 LCDVCKERRGLVFCVEDRAIL 382
           +C+ C  +   V CVE+R  L
Sbjct: 47  VCERCNAQPATVRCVEERVSL 67



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +2

Query: 113 ARRASRSIAMRVQCDVCGLEPAAVLCCADEAALCSPCNRRVH 238
           ++R SR++     C+ C  +PA V C  +  +LC  C+   H
Sbjct: 39  SKRHSRTLV----CERCNAQPATVRCVEERVSLCQNCDWSGH 76

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>COL4_ARATH (Q940T9) Zinc finger protein CONSTANS-LIKE 4|
          Length = 362

 Score = 51.6 bits (122), Expect = 5e-07
 Identities = 28/77 (36%), Positives = 37/77 (48%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 331
           CD C    AA+ C  D A LC  C+ +VH ANKLA +H R+               +C+V
Sbjct: 6   CDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVW--------------MCEV 51

Query: 332 CKERRGLVFCVEDRAIL 382
           C++    V C  D A L
Sbjct: 52  CEQAPAHVTCKADAAAL 68



 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 22/41 (53%), Positives = 27/41 (65%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRL 274
           C+VC   PA V C AD AALC  C+R +H AN LA +H R+
Sbjct: 49  CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHERV 89

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>COLX_ARATH (Q9C9F4) Putative zinc finger protein At1g68190|
          Length = 356

 Score = 51.2 bits (121), Expect = 6e-07
 Identities = 27/77 (35%), Positives = 36/77 (46%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 331
           C+ C    A V C AD A LC  C+ +VH AN L+G+H R                LCD 
Sbjct: 14  CEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTV--------------LCDS 59

Query: 332 CKERRGLVFCVEDRAIL 382
           CK +  +V C + +  L
Sbjct: 60  CKNQPCVVRCFDHKMFL 76



 Score = 31.6 bits (70), Expect = 0.49
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 146 VQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTL 280
           V CD C  +P  V C   +  LC  CN + H     + +HRR  L
Sbjct: 55  VLCDSCKNQPCVVRCFDHKMFLCHGCNDKFHGGG--SSEHRRRDL 97

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>COL5_ARATH (Q9FHH8) Zinc finger protein CONSTANS-LIKE 5|
          Length = 355

 Score = 50.8 bits (120), Expect = 8e-07
 Identities = 22/41 (53%), Positives = 27/41 (65%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRL 274
           C+VC   PAAV C AD AALC  C+  +H AN LA +H R+
Sbjct: 61  CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHERV 101



 Score = 40.4 bits (93), Expect = 0.001
 Identities = 24/77 (31%), Positives = 32/77 (41%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGPLCDV 331
           CD C    AAV C  D A LC  C+ R+H       +H R+               +C+V
Sbjct: 22  CDACKSVTAAVFCRVDSAFLCIACDTRIHSFT----RHERVW--------------VCEV 63

Query: 332 CKERRGLVFCVEDRAIL 382
           C++    V C  D A L
Sbjct: 64  CEQAPAAVTCKADAAAL 80

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>COL11_ARATH (O23379) Putative zinc finger protein CONSTANS-LIKE 11|
          Length = 330

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 26/81 (32%), Positives = 36/81 (44%)
 Frame = +2

Query: 140 MRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGP 319
           M  +CD CG E A + C +D A LC  C+  VH AN L+ +H R                
Sbjct: 1   MEARCDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTR--------------SL 46

Query: 320 LCDVCKERRGLVFCVEDRAIL 382
           LC+ C  +   V C+ +   L
Sbjct: 47  LCEKCSLQPTAVHCMNENVSL 67



 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = +2

Query: 113 ARRASRSIAMRVQCDVCGLEPAAVLCCADEAALCSPC 223
           ++R +RS+     C+ C L+P AV C  +  +LC  C
Sbjct: 39  SQRHTRSLL----CEKCSLQPTAVHCMNENVSLCQGC 71

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>COL10_ARATH (Q9LUA9) Zinc finger protein CONSTANS-LIKE 10|
          Length = 373

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 26/81 (32%), Positives = 37/81 (45%)
 Frame = +2

Query: 140 MRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGP 319
           M   CD CG + + V C +D A LC  C+R VH AN L+ +H R                
Sbjct: 1   MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTL-------------- 46

Query: 320 LCDVCKERRGLVFCVEDRAIL 382
           +C+ C  +   V C ++R  L
Sbjct: 47  VCERCNAQPASVRCSDERVSL 67



 Score = 32.0 bits (71), Expect = 0.37
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +2

Query: 113 ARRASRSIAMRVQCDVCGLEPAAVLCCADEAALCSPCNRRVH--RANKLAGKHRRLTL 280
           ++R SR++     C+ C  +PA+V C  +  +LC  C+   H  + +     H+R T+
Sbjct: 39  SKRHSRTLV----CERCNAQPASVRCSDERVSLCQNCDWSGHDGKNSTTTSHHKRQTI 92

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>COL8_ARATH (Q9M9B3) Putative zinc finger protein CONSTANS-LIKE 8|
          Length = 313

 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 20/55 (36%), Positives = 30/55 (54%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATG 316
           C++C  + A   C +D+A LC  C+  VH AN +A KH R+ L   + + D   G
Sbjct: 15  CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHERVCLRTNEISNDVRGG 69

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>COL6_ARATH (Q8LG76) Zinc finger protein CONSTANS-LIKE 6|
          Length = 406

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 21/48 (43%), Positives = 25/48 (52%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDA 295
           CD C    A   C AD+A LC  C+  VH AN LA +H R+ L    A
Sbjct: 17  CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSASA 64

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>COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16|
          Length = 417

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 20/43 (46%), Positives = 24/43 (55%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTL 280
           CD C    A   C AD+A LC  C+  VH AN LA +H R+ L
Sbjct: 17  CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRL 59

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>COL12_ARATH (Q9LJ44) Putative zinc finger protein CONSTANS-LIKE 12|
          Length = 337

 Score = 41.2 bits (95), Expect = 6e-04
 Identities = 21/78 (26%), Positives = 35/78 (44%)
 Frame = +2

Query: 140 MRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQLDAAGDAATGP 319
           M  +CD C    A + C +D A LC  C+  VH AN L+ +H R                
Sbjct: 1   MEPKCDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIR--------------SL 46

Query: 320 LCDVCKERRGLVFCVEDR 373
           +C+ C  +   + C++++
Sbjct: 47  ICEKCFSQPAAIRCLDEK 64

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>COL7_ARATH (Q9C9A9) Putative zinc finger protein CONSTANS-LIKE 7|
          Length = 392

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = +2

Query: 152 CDVCGLEP-AAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTL 280
           CD C     A+  C AD+A LC  C+  +H AN LA +H R+ L
Sbjct: 22  CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRL 65

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>ARD1_CAEEL (Q09654) Putative GTP-binding protein ard-1 homolog|
          Length = 539

 Score = 35.4 bits (80), Expect = 0.034
 Identities = 17/56 (30%), Positives = 28/56 (50%)
 Frame = +2

Query: 119 RASRSIAMRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTLLQ 286
           R S+   + ++CD      A + C   ++ LC  C+   H  N L+ KHRR+ L +
Sbjct: 97  RYSKERLLNLECDEDSEHVAVIYCTVCDSNLCERCSESTHSTNVLS-KHRRIPLTE 151

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>ARD1_MOUSE (Q8BGX0) GTP-binding protein ARD-1 (ADP-ribosylation factor domain|
           protein 1) (Tripartite motif protein 23)
          Length = 574

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +2

Query: 146 VQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTL 280
           ++CD      A+V C      LCS C++  H    LA KHRR+ L
Sbjct: 125 IRCDEDEAHVASVYCTVCATHLCSDCSQVTHSTKTLA-KHRRVPL 168

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>ARD1_RAT (P36407) GTP-binding protein ARD-1 (ADP-ribosylation factor domain|
           protein 1) (Tripartite motif protein 23) (Fragment)
          Length = 554

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +2

Query: 146 VQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTL 280
           ++CD      A+V C      LCS C++  H    LA KHRR+ L
Sbjct: 105 IRCDEDEAHVASVYCTVCATHLCSECSQVTHSTKTLA-KHRRVPL 148

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>KE4_MOUSE (Q31125) Zinc transporter SLC39A7 (Solute carrier family 39 member|
           7) (Histidine-rich membrane protein Ke4)
          Length = 476

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 24/61 (39%), Positives = 26/61 (42%)
 Frame = -1

Query: 184 HGGRLEAAHVALHTHGDRSAGSSCGQVKGGEEKALRLDARKEVEGNNARRTGKQAKQREE 5
           HG     AH   HTHGDR   SS  +    EEK +    RK   GN   R G    Q  E
Sbjct: 256 HGHGDRHAHGDSHTHGDRHECSSKEKPSTEEEKEVG-GLRKRRGGNTGPRDGPVKPQSPE 314

Query: 4   E 2
           E
Sbjct: 315 E 315

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>ARD1_HUMAN (P36406) GTP-binding protein ARD-1 (ADP-ribosylation factor domain|
           protein 1) (Tripartite motif protein 23) (RING finger
           protein 46)
          Length = 574

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 17/45 (37%), Positives = 23/45 (51%)
 Frame = +2

Query: 146 VQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTL 280
           ++CD      A+V C      LCS C++  H    LA KHRR+ L
Sbjct: 125 IRCDEDEAHLASVYCTVCATHLCSECSQVTHSTKTLA-KHRRVPL 168

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>TRIM9_RAT (Q91ZY8) Tripartite motif protein 9 (SNAP-25-interacting RING|
           finger protein)
          Length = 710

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +2

Query: 119 RASRSIAMRVQCDVCGLEP--AAVLCCADEAALCSPCNRRVHRANKLAGKHR 268
           R  +S A  ++C +C   P  A V+C   +   C PC  R H       KHR
Sbjct: 157 RYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHR 208

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>TRIM9_HUMAN (Q9C026) Tripartite motif protein 9 (RING finger protein 91)|
          Length = 710

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +2

Query: 119 RASRSIAMRVQCDVCGLEP--AAVLCCADEAALCSPCNRRVHRANKLAGKHR 268
           R  +S A  ++C +C   P  A V+C   +   C PC  R H       KHR
Sbjct: 157 RYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHR 208

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>TRPD2_STRCO (Q9Z4W9) Anthranilate phosphoribosyltransferase 2 (EC 2.4.2.18)|
          Length = 335

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 18/46 (39%), Positives = 23/46 (50%)
 Frame = -1

Query: 166 AAHVALHTHGDRSAGSSCGQVKGGEEKALRLDARKEVEGNNARRTG 29
           A  V +  HG+RSA S+CG     EE  +R+D   E       RTG
Sbjct: 91  ACGVRVAKHGNRSASSACGSADVLEELGVRIDLGAEEAAACLDRTG 136

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>TRIM9_MOUSE (Q8C7M3) Tripartite motif protein 9|
          Length = 817

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
 Frame = +2

Query: 119 RASRSIAMRVQCDVCGLEP--AAVLCCADEAALCSPCNRRVHRANKLAGKHR 268
           R  +S A  ++C +C   P  A V+C   +   C PC  R H       KHR
Sbjct: 157 RYQQSKAAALKCQLCEKAPKEATVMCEQCDVFYCDPCRLRCHPPRGPLAKHR 208

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>ZFYV1_HUMAN (Q9HBF4) Zinc finger FYVE domain-containing protein 1 (Double|
           FYVE-containing protein 1) (Tandem FYVE fingers-1) (SR3)
          Length = 777

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 25/92 (27%), Positives = 36/92 (39%), Gaps = 1/92 (1%)
 Frame = +2

Query: 110 PARRASRSIAMRVQCDVCGLEPAAVLCCADEAAL-CSPCNRRVHRANKLAGKHRRLTLLQ 286
           PA +      M  +   C     A+  C +  +L C  C   +HR  +L   H R+ L  
Sbjct: 7   PAEKGLNPGLMCQESYACSGTDEAIFECDECCSLQCLRCEEELHRQERLRN-HERIRL-- 63

Query: 287 LDAAGDAATGPLCDVCKERRGLVFCVEDRAIL 382
                     P CD+CK   G +  V  RAI+
Sbjct: 64  -----KPGHVPYCDLCKGLSGHLPGVRQRAIV 90

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>Y855_TREPA (O83827) Hypothetical protein TP0855 precursor|
          Length = 1127

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -1

Query: 163 AHVALHTHGDRSAGSSCGQVKGGEEKALRLDARKE 59
           AH+A H H   SA +   Q     E+ALR DA+ E
Sbjct: 628 AHMAFHQHSGVSALAEYAQQLTSAEEALRFDAKDE 662

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>DH11_GOSHI (P09442) Late embryogenesis abundant protein D-11 (LEA D-11)|
          Length = 145

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
 Frame = -1

Query: 208 RGLVGAAEHGGRLEAAHVALHTHGDRSAGSSCGQVK--GGEEKALRLDARKEVEGNNARR 35
           RG++G    GG     H  LH  G  S+ SS  + +  G ++K L+   ++++ GN   +
Sbjct: 40  RGILGI---GGHHHGGHHGLHRTGSSSSSSSSSEDEGTGKKKKGLKERLKEKIPGNKEHQ 96

Query: 34  T 32
           +
Sbjct: 97  S 97

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>GCR_XENLA (P49844) Glucocorticoid receptor (GR)|
          Length = 776

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 24/98 (24%), Positives = 37/98 (37%), Gaps = 7/98 (7%)
 Frame = +2

Query: 80  QSLLFSSFDLPARRASRSIAMRVQCDVCGLEPAAVLCCADEAA-------LCSPCNRRVH 238
           +S+  + +  P  R+  S +        G  P   L C+DEA+        C  C     
Sbjct: 386 RSVFSNGYSSPGIRSDASPSPSTSSTSTGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFK 445

Query: 239 RANKLAGKHRRLTLLQLDAAGDAATGPLCDVCKERRGL 352
           RA  + G+H  L   + D   D      C  C+ R+ L
Sbjct: 446 RA--VEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCL 481

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>GCR_MOUSE (P06537) Glucocorticoid receptor (GR)|
          Length = 783

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 23/96 (23%), Positives = 36/96 (37%), Gaps = 5/96 (5%)
 Frame = +2

Query: 80  QSLLFSSFDLPARRASRSIAMRVQCDVCGLEPAAVLCCADEAALCS----PCNR-RVHRA 244
           +S+  + +  P  R   S          G  P   L C+DEA++C      C   +V   
Sbjct: 394 RSVFSNGYSSPGMRPDVSSPPSSSSTATGPPPKLCLVCSDEASVCHYGVLTCGSCKVFFK 453

Query: 245 NKLAGKHRRLTLLQLDAAGDAATGPLCDVCKERRGL 352
             + G+H  L   + D   D      C  C+ R+ L
Sbjct: 454 RAVEGQHNYLCAGRNDCIIDKIRRKNCPACRYRKCL 489

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>GCR_RABIT (P59667) Glucocorticoid receptor (GR)|
          Length = 772

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 25/98 (25%), Positives = 35/98 (35%), Gaps = 7/98 (7%)
 Frame = +2

Query: 80  QSLLFSSFDLPARRASRSIAMRVQCDVCGLEPAAVLCCADEAA-------LCSPCNRRVH 238
           +S+  + +  P  R   S          G  P   L C+DEA+        C  C     
Sbjct: 382 RSVFSNGYSSPGMRPDVSSPPSNSTTAAGPPPKLCLVCSDEASGCHYGVLTCGSCKVFFK 441

Query: 239 RANKLAGKHRRLTLLQLDAAGDAATGPLCDVCKERRGL 352
           RA K  G+H  L   + D   D      C  C+ R+ L
Sbjct: 442 RAVK--GQHNYLCAGRNDCIIDKIRRKNCPACRYRKCL 477

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>TRI25_MOUSE (Q61510) Tripartite motif protein 25 (Zinc finger protein 147)|
           (Estrogen-responsive finger protein) (Efp)
          Length = 634

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 110 PARRASRSIAMRVQCDVCGLEPAAVLCCADEAALC 214
           PAR ++ S A +V CD C  E A   C    A+ C
Sbjct: 92  PARFSASSAATQVACDHCLTEIAVKTCLVCMASFC 126

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>RNF31_HUMAN (Q96EP0) RING finger protein 31 (Zinc in-between-RING-finger|
           ubiquitin-associated domain protein)
          Length = 1072

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +2

Query: 152 CDVCGLEPAAVLCCADEAALCSPCNRRVHRANKLAGKHRRLTL 280
           C +CG  P  + C + + ALC  C+   H  +     H R TL
Sbjct: 217 CFLCGSAPGTLHCPSCKQALCPACDHLFH-GHPSRAHHLRQTL 258

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>CHIS_BACCI (P33673) Chitosanase precursor (EC 3.2.1.132)|
          Length = 301

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 12  LCFACFPVLLALFPSTSFLASSRKAFSSP 98
           L F CF ++ +LF +T+    S+ A +SP
Sbjct: 17  LAFLCFTLMASLFGATALFGPSKAAAASP 45

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>MUTS_LACJO (P61668) DNA mismatch repair protein mutS|
          Length = 857

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -1

Query: 199 VGAAEHGGRLEAAHVALHTHGDRSAGSSCGQVKGGEEKALR 77
           VGA E  G+L   H  L    D+S G    Q+ G   K LR
Sbjct: 741 VGATEENGKLIFLHKILPGPADQSYGIHVAQLAGLPHKVLR 781

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>COBL8_ARATH (Q9LIB6) COBRA-like protein 8 precursor|
          Length = 653

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = +3

Query: 48  FPSTSFLASSRKAFSSPPLTCPQEEPADRSPCV 146
           FP TS L S++ AF+S  + C   +P     CV
Sbjct: 382 FPDTSGLPSNKSAFASWQVVCNITQPTPPKCCV 414

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>TRI47_HUMAN (Q96LD4) Tripartite motif protein 47 (Gene overexpressed in|
           astrocytoma protein) (RING finger protein 100)
          Length = 638

 Score = 27.3 bits (59), Expect = 9.2
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = +2

Query: 110 PARRASRSIAMRVQCDVCGLEPAAVLCCADEAALCSPCNRRVHRANKL 253
           P RR   S+  R       L P    C A+   LC  C  + HR ++L
Sbjct: 173 PLRRLEESLCPR------HLRPXERYCRAERVCLCEACAAQEHRGHEL 214


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.308    0.141    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,245,582
Number of Sequences: 219361
Number of extensions: 483722
Number of successful extensions: 1346
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1325
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 1396778976
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result