ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet62a12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY453406.1| Bambusa oldhamii chitinase mRNA, complete cds 52 5e-04
2ref|XM_468715.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.030
3gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 46 0.030
4gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genom... 46 0.030
5emb|X76041.1|TACHIG T.aestivum (Chinese spring) chi gene for end... 46 0.030
6gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genom... 46 0.030
7gb|AY997529.2| Musa x paradisiaca chitinase (Chi-1) mRNA, comple... 46 0.030
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.030
9gb|AY228175.1|AY228174S2 Streptomyces murayamaensis putative ary... 46 0.030
10gb|AF280437.1|AF280437 Secale cereale 31.7 kDa class I endochiti... 46 0.030
11gb|AF000966.1|AF000966 Poa pratensis chitinase (Chi2) gene, comp... 46 0.030
12gb|AF000965.1|AF000965 Poa pratensis chitinase (Chi3) pseudogene... 46 0.030
13gb|AF000964.1|AF000964 Poa pratensis chitinase (Chi1) gene, comp... 46 0.030
14gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitinase g... 44 0.12
15dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 42 0.47
16gb|U07824.1|AAU07824 Alicyclobacillus acidocaldarius neutral pro... 42 0.47
17gb|U25630.1|BSU25630 Bacillus sp. neutral proteinase (npr) gene,... 42 0.47
18gb|U25629.1|BCU25629 Bacillus caldolyticus neutral proteinase (n... 42 0.47
19gb|M63575.1|BACNPRAA B.caldolyticus neutral protease (npr) gene,... 42 0.47
20gb|M11446.1|BACNPGA B.stearothermophilus neutral protease gene (... 42 0.47
21ref|XM_468060.1| Oryza sativa (japonica cultivar-group), mRNA 40 1.9
22dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 1.9
23gb|AF358659.1|AF358659 Ipomoea purpurea chalcone synthase (CHS-D... 40 1.9
24gb|AF358658.1|AF358658 Ipomoea purpurea chalcone synthase (CHS-D... 40 1.9
25gb|AF358657.1|AF358657 Ipomoea purpurea chalcone synthase (CHS-D... 40 1.9
26gb|AF358656.1|AF358656 Ipomoea purpurea chalcone synthase (CHS-D... 40 1.9
27gb|AF358655.1|AF358655 Ipomoea purpurea chalcone synthase (CHS-D... 40 1.9
28gb|AF358654.1|AF358654 Ipomoea purpurea chalcone synthase (CHS-D... 40 1.9
29dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
30dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
31gb|AE004491.1| Pseudomonas aeruginosa PAO1, section 52 of 529 of... 40 1.9
32dbj|AP005538.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
33dbj|AP003630.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
34dbj|AP005658.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
35dbj|AP004853.3| Oryza sativa (japonica cultivar-group) genomic D... 40 1.9
36dbj|AB004905.1| Ipomoea purpurea DNA for chalcone synthase, comp... 40 1.9
37gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 1.9
38dbj|AB001826.1| Ipomoea purpurea mRNA for chalcone synthase, com... 40 1.9
39ref|XM_478024.1| Oryza sativa (japonica cultivar-group), mRNA 38 7.4
40gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp... 38 7.4
41gb|AY657692.1| Synthetic construct Peudomonas aeruginosa clone F... 38 7.4
42gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 38 7.4
43gb|AY596533.1| Saccharum officinarum clone SCJLRZ1027E09, comple... 38 7.4
44gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 38 7.4
45emb|CR407582.7| Zebrafish DNA sequence from clone DKEY-224L8 in ... 38 7.4
46emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 38 7.4
47emb|BX914219.10| Zebrafish DNA sequence from clone DKEY-88A11 in... 38 7.4
48gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 38 7.4
49gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 38 7.4
50gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 38 7.4
51dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.4
52gb|AC009910.5|AC009910 Drosophila melanogaster, chromosome 2L, r... 38 7.4
53gb|AE004729.1| Pseudomonas aeruginosa PAO1, section 290 of 529 o... 38 7.4
54gb|AE004570.1| Pseudomonas aeruginosa PAO1, section 131 of 529 o... 38 7.4
55dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 38 7.4
56dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 38 7.4
57dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.4
58gb|AY437443.1| Triticum aestivum cultivar Ning 7840 class I chit... 38 7.4
59gb|AE003610.3| Drosophila melanogaster chromosome 2L, section 19... 38 7.4
60gb|AC167706.2| Reniera sp. JGI-2005 clone JGIBAYC-9H10, complete... 38 7.4
61dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone... 38 7.4
62dbj|AB029936.1| Triticum aestivum Chi 3 mRNA for chitinase 3, co... 38 7.4 
>gb|AY453406.1| Bambusa oldhamii chitinase mRNA, complete cds
          Length = 1232

 Score = 52.0 bits (26), Expect = 5e-04
 Identities = 29/30 (96%)
 Strand = Plus / Plus

                                         
Query: 122 cgcccagcagtgcggctcgcaggctggcgg 151
           |||||||||||||||||||||||| |||||
Sbjct: 69  cgcccagcagtgcggctcgcaggccggcgg 98
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>ref|XM_468715.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 981

 Score = 46.1 bits (23), Expect = 0.030
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 103 tcctcgcggcggccgtggacgcccagcagtgcggc 137
           ||||||||||||||||| | ||| |||||||||||
Sbjct: 41  tcctcgcggcggccgtgcatgccgagcagtgcggc 75
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 46.1 bits (23), Expect = 0.030
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 103      tcctcgcggcggccgtggacgcccagcagtgcggc 137
                ||||||||||||||||| | ||| |||||||||||
Sbjct: 17203147 tcctcgcggcggccgtgcatgccgagcagtgcggc 17203181
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>gb|AC145386.1| Oryza sativa chromosome 3 BAC OSJNBb0028K20 genomic sequence, complete
             sequence
          Length = 115326

 Score = 46.1 bits (23), Expect = 0.030
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 103   tcctcgcggcggccgtggacgcccagcagtgcggc 137
             ||||||||||||||||| | ||| |||||||||||
Sbjct: 35891 tcctcgcggcggccgtgcatgccgagcagtgcggc 35925
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>emb|X76041.1|TACHIG T.aestivum (Chinese spring) chi gene for endochitinase
          Length = 1985

 Score = 46.1 bits (23), Expect = 0.030
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 121 acgcccagcagtgcggctcgcaggctggcgg 151
           ||||| ||||||||||||||||||| |||||
Sbjct: 688 acgccgagcagtgcggctcgcaggccggcgg 718
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>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete
             sequence
          Length = 153247

 Score = 46.1 bits (23), Expect = 0.030
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 103   tcctcgcggcggccgtggacgcccagcagtgcggc 137
             ||||||||||||||||| | ||| |||||||||||
Sbjct: 94540 tcctcgcggcggccgtgcatgccgagcagtgcggc 94574
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>gb|AY997529.2| Musa x paradisiaca chitinase (Chi-1) mRNA, complete cds
          Length = 1082

 Score = 46.1 bits (23), Expect = 0.030
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 103 tcctcgcggcggccgtggacgcccagcagtgcggc 137
           ||||||||||||||||| | ||| |||||||||||
Sbjct: 84  tcctcgcggcggccgtgcatgccgagcagtgcggc 118
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.030
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                   
Query: 103      tcctcgcggcggccgtggacgcccagcagtgcggc 137
                ||||||||||||||||| | ||| |||||||||||
Sbjct: 17196716 tcctcgcggcggccgtgcatgccgagcagtgcggc 17196750
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>gb|AY228175.1|AY228174S2 Streptomyces murayamaensis putative arylamine N-acetyltransferase,
            putative hydrolase, putative transmembrane efflux
            protein, putative transcriptional regulator, putative
            ribonuclease HII, putative ATP-dependent DNA helicase,
            putative bifunctional enzyme deaminase/reductase genes,
            complete cds; kinamycin biosynthetic gene cluster,
            partial sequence and unknown genes
          Length = 34564

 Score = 46.1 bits (23), Expect = 0.030
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 92   cctggccatcgtcctcgcggcgg 114
            |||||||||||||||||||||||
Sbjct: 4392 cctggccatcgtcctcgcggcgg 4370
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>gb|AF280437.1|AF280437 Secale cereale 31.7 kDa class I endochitinase-antifreeze protein
           precursor, mRNA, complete cds
          Length = 1192

 Score = 46.1 bits (23), Expect = 0.030
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 121 acgcccagcagtgcggctcgcaggctggcgg 151
           ||||| ||||||||||||||||||| |||||
Sbjct: 104 acgccgagcagtgcggctcgcaggccggcgg 134
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>gb|AF000966.1|AF000966 Poa pratensis chitinase (Chi2) gene, complete cds
          Length = 1080

 Score = 46.1 bits (23), Expect = 0.030
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 121 acgcccagcagtgcggctcgcaggctggcgg 151
           ||||| ||||||||||||||||||| |||||
Sbjct: 83  acgccgagcagtgcggctcgcaggccggcgg 113
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>gb|AF000965.1|AF000965 Poa pratensis chitinase (Chi3) pseudogene sequence
          Length = 1173

 Score = 46.1 bits (23), Expect = 0.030
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 121 acgcccagcagtgcggctcgcaggctggcgg 151
           ||||| ||||||||||||||||||| |||||
Sbjct: 249 acgccgagcagtgcggctcgcaggcaggcgg 279
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>gb|AF000964.1|AF000964 Poa pratensis chitinase (Chi1) gene, complete cds
          Length = 1252

 Score = 46.1 bits (23), Expect = 0.030
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 121 acgcccagcagtgcggctcgcaggctggcgg 151
           ||||| ||||||||||||||||||| |||||
Sbjct: 83  acgccgagcagtgcggctcgcaggccggcgg 113
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>gb|U02287.1|HVU02287 Hordeum vulgare cultivar NK1558 chitinase gene, complete cds
          Length = 1684

 Score = 44.1 bits (22), Expect = 0.12
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 122 cgcccagcagtgcggctcgcaggctggcgg 151
           |||| ||||||||||||||||||| |||||
Sbjct: 653 cgccgagcagtgcggctcgcaggccggcgg 682
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 107     cgcggcggccgtggacgccca 127
               |||||||||||||||||||||
Sbjct: 2865830 cgcggcggccgtggacgccca 2865810
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>gb|U07824.1|AAU07824 Alicyclobacillus acidocaldarius neutral protease gene, complete cds
          Length = 2231

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 107  cgcggcggccgtggacgccca 127
            |||||||||||||||||||||
Sbjct: 1270 cgcggcggccgtggacgccca 1290
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>gb|U25630.1|BSU25630 Bacillus sp. neutral proteinase (npr) gene, complete cds
          Length = 1641

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 107 cgcggcggccgtggacgccca 127
           |||||||||||||||||||||
Sbjct: 891 cgcggcggccgtggacgccca 911
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>gb|U25629.1|BCU25629 Bacillus caldolyticus neutral proteinase (npr) gene, complete cds
          Length = 1641

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 107 cgcggcggccgtggacgccca 127
           |||||||||||||||||||||
Sbjct: 891 cgcggcggccgtggacgccca 911
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>gb|M63575.1|BACNPRAA B.caldolyticus neutral protease (npr) gene, complete cds
          Length = 1974

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 107  cgcggcggccgtggacgccca 127
            |||||||||||||||||||||
Sbjct: 1202 cgcggcggccgtggacgccca 1222
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>gb|M11446.1|BACNPGA B.stearothermophilus neutral protease gene (nprT), complete cds
          Length = 1881

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 107  cgcggcggccgtggacgccca 127
            |||||||||||||||||||||
Sbjct: 1111 cgcggcggccgtggacgccca 1131
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>ref|XM_468060.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 270

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  catcctggccatcgtcctcg 108
           ||||||||||||||||||||
Sbjct: 27  catcctggccatcgtcctcg 46
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 76      cgatggtggcgaccatcctggcca 99
               |||||||||||||||| |||||||
Sbjct: 3988458 cgatggtggcgaccatgctggcca 3988435



 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 108     gcggcggccgtggacgccc 126
               |||||||||||||||||||
Sbjct: 4268807 gcggcggccgtggacgccc 4268789
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>gb|AF358659.1|AF358659 Ipomoea purpurea chalcone synthase (CHS-D) gene, CHSDUS1 allele,
            complete cds
          Length = 12821

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   ggcgaccatcctggccatcg 102
            ||||||||||||||||||||
Sbjct: 5019 ggcgaccatcctggccatcg 5038
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>gb|AF358658.1|AF358658 Ipomoea purpurea chalcone synthase (CHS-D) gene, CHSDMex10 allele,
           complete cds
          Length = 4781

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  ggcgaccatcctggccatcg 102
           ||||||||||||||||||||
Sbjct: 860 ggcgaccatcctggccatcg 879
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>gb|AF358657.1|AF358657 Ipomoea purpurea chalcone synthase (CHS-D) gene, CHSDUS2 allele,
            complete cds
          Length = 6135

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   ggcgaccatcctggccatcg 102
            ||||||||||||||||||||
Sbjct: 2047 ggcgaccatcctggccatcg 2066
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>gb|AF358656.1|AF358656 Ipomoea purpurea chalcone synthase (CHS-D) gene, CHSDMex22 allele,
            partial cds
          Length = 4862

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   ggcgaccatcctggccatcg 102
            ||||||||||||||||||||
Sbjct: 1030 ggcgaccatcctggccatcg 1049
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>gb|AF358655.1|AF358655 Ipomoea purpurea chalcone synthase (CHS-D) gene, CHSDMex9 allele,
           complete cds
          Length = 4856

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  ggcgaccatcctggccatcg 102
           ||||||||||||||||||||
Sbjct: 858 ggcgaccatcctggccatcg 877
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>gb|AF358654.1|AF358654 Ipomoea purpurea chalcone synthase (CHS-D) gene, CHSDMex27 allele,
            complete cds
          Length = 5147

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   ggcgaccatcctggccatcg 102
            ||||||||||||||||||||
Sbjct: 1138 ggcgaccatcctggccatcg 1157
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 101      cgtcctcgcggcggccgtgg 120
                ||||||||||||||||||||
Sbjct: 22222758 cgtcctcgcggcggccgtgg 22222777
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 89       catcctggccatcgtcctcg 108
                ||||||||||||||||||||
Sbjct: 32802081 catcctggccatcgtcctcg 32802062
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>gb|AE004491.1| Pseudomonas aeruginosa PAO1, section 52 of 529 of the complete
           genome
          Length = 10297

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 89  catcctggccatcgtcctcg 108
           ||||||||||||||||||||
Sbjct: 369 catcctggccatcgtcctcg 388
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>dbj|AP005538.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0013K01
          Length = 139464

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    catcctggccatcgtcctcg 108
             ||||||||||||||||||||
Sbjct: 60099 catcctggccatcgtcctcg 60080
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>dbj|AP003630.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0566A10
          Length = 174367

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 101  cgtcctcgcggcggccgtgg 120
            ||||||||||||||||||||
Sbjct: 1181 cgtcctcgcggcggccgtgg 1200
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>dbj|AP005658.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0620D11
          Length = 140245

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    cgtcctcgcggcggccgtgg 120
              ||||||||||||||||||||
Sbjct: 140057 cgtcctcgcggcggccgtgg 140076
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>dbj|AP004853.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1448_G06
          Length = 136823

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     catcctggccatcgtcctcg 108
              ||||||||||||||||||||
Sbjct: 130316 catcctggccatcgtcctcg 130297
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>dbj|AB004905.1| Ipomoea purpurea DNA for chalcone synthase, complete cds
          Length = 5718

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   ggcgaccatcctggccatcg 102
            ||||||||||||||||||||
Sbjct: 1138 ggcgaccatcctggccatcg 1157
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    tcgcggcggccgtggacgcc 125
              ||||||||||||||||||||
Sbjct: 647460 tcgcggcggccgtggacgcc 647441
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>dbj|AB001826.1| Ipomoea purpurea mRNA for chalcone synthase, complete cds
          Length = 1518

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  ggcgaccatcctggccatcg 102
           ||||||||||||||||||||
Sbjct: 168 ggcgaccatcctggccatcg 187
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>ref|XM_478024.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 792

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 106 tcgcggcggccgtggacgc 124
           |||||||||||||||||||
Sbjct: 93  tcgcggcggccgtggacgc 111
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>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 106     tcgcggcggccgtggacgc 124
               |||||||||||||||||||
Sbjct: 2887025 tcgcggcggccgtggacgc 2887007
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>gb|AY657692.1| Synthetic construct Peudomonas aeruginosa clone FLH032706.01F
           PA3042 gene, partial cds
          Length = 324

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 121 acgcccagcagtgcggctc 139
           |||||||||||||||||||
Sbjct: 227 acgcccagcagtgcggctc 209
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 106   tcgcggcggccgtggacgc 124
             |||||||||||||||||||
Sbjct: 44390 tcgcggcggccgtggacgc 44372
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>gb|AY596533.1| Saccharum officinarum clone SCJLRZ1027E09, complete sequence
          Length = 1674

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 104 cctcgcggcggccgtggac 122
           |||||||||||||||||||
Sbjct: 366 cctcgcggcggccgtggac 348
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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 80      ggtggcgaccatcctggccatcg 102
               ||||||||||||| |||||||||
Sbjct: 2409063 ggtggcgaccatcttggccatcg 2409085
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>emb|CR407582.7| Zebrafish DNA sequence from clone DKEY-224L8 in linkage group 7,
             complete sequence
          Length = 200693

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 41    catgaagccatacatgtcc 59
             |||||||||||||||||||
Sbjct: 64105 catgaagccatacatgtcc 64087
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 106     tcgcggcggccgtggacgc 124
               |||||||||||||||||||
Sbjct: 3889992 tcgcggcggccgtggacgc 3889974
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>emb|BX914219.10| Zebrafish DNA sequence from clone DKEY-88A11 in linkage group 13,
             complete sequence
          Length = 126004

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 41    catgaagccatacatgtcc 59
             |||||||||||||||||||
Sbjct: 58535 catgaagccatacatgtcc 58553
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 83      ggcgaccatcctggccatc 101
               |||||||||||||||||||
Sbjct: 2188226 ggcgaccatcctggccatc 2188208
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 84     gcgaccatcctggccatcg 102
              |||||||||||||||||||
Sbjct: 831093 gcgaccatcctggccatcg 831075
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>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 64     tgccgagagcctcgatggtggcgacca 90
              ||||||| |||||||||||| ||||||
Sbjct: 431188 tgccgagcgcctcgatggtgtcgacca 431162
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 106      tcgcggcggccgtggacgc 124
                |||||||||||||||||||
Sbjct: 16722096 tcgcggcggccgtggacgc 16722078
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>gb|AC009910.5|AC009910 Drosophila melanogaster, chromosome 2L, region 25D-25E, BAC clone
             BACR35L07, complete sequence
          Length = 193924

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 91    tcctggccatcgtcctcgc 109
             |||||||||||||||||||
Sbjct: 90550 tcctggccatcgtcctcgc 90532
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>gb|AE004729.1| Pseudomonas aeruginosa PAO1, section 290 of 529 of the complete
            genome
          Length = 12189

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 121  acgcccagcagtgcggctc 139
            |||||||||||||||||||
Sbjct: 2754 acgcccagcagtgcggctc 2736
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>gb|AE004570.1| Pseudomonas aeruginosa PAO1, section 131 of 529 of the complete
            genome
          Length = 11398

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 82   tggcgaccatcctggccatcgtc 104
            |||||||||||||| ||||||||
Sbjct: 5904 tggcgaccatcctgaccatcgtc 5882
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 79      tggtggcgaccatcctggc 97
               |||||||||||||||||||
Sbjct: 2089919 tggtggcgaccatcctggc 2089937
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 89      catcctggccatcgtcctc 107
               |||||||||||||||||||
Sbjct: 7016001 catcctggccatcgtcctc 7015983
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>dbj|AP003808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1115_C05
          Length = 146585

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 106   tcgcggcggccgtggacgc 124
             |||||||||||||||||||
Sbjct: 62008 tcgcggcggccgtggacgc 61990
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>gb|AY437443.1| Triticum aestivum cultivar Ning 7840 class I chitinase mRNA,
           complete cds
          Length = 1121

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 121 acgcccagcagtgcggctcgcaggctggcgg 151
           ||||| |||| |||||||||||||| |||||
Sbjct: 121 acgccgagcaatgcggctcgcaggccggcgg 151
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>gb|AE003610.3| Drosophila melanogaster chromosome 2L, section 19 of 83 of the complete
              sequence
          Length = 260249

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 91     tcctggccatcgtcctcgc 109
              |||||||||||||||||||
Sbjct: 133657 tcctggccatcgtcctcgc 133639
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>gb|AC167706.2| Reniera sp. JGI-2005 clone JGIBAYC-9H10, complete sequence
          Length = 41616

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 35    catgaacatgaagccatacatgt 57
             |||||||| ||||||||||||||
Sbjct: 15252 catgaacaggaagccatacatgt 15274
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>dbj|AP006428.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT04J15, TM0321,
              complete sequence
          Length = 127049

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 10     atatcaggcaccacccaag 28
              |||||||||||||||||||
Sbjct: 101033 atatcaggcaccacccaag 101015
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>dbj|AB029936.1| Triticum aestivum Chi 3 mRNA for chitinase 3, complete cds
          Length = 1148

 Score = 38.2 bits (19), Expect = 7.4
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                          
Query: 121 acgcccagcagtgcggctcgcaggctggcgg 151
           ||||| |||| |||||||||||||| |||||
Sbjct: 107 acgccgagcaatgcggctcgcaggccggcgg 137


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,099,954
Number of Sequences: 3902068
Number of extensions: 1099954
Number of successful extensions: 116149
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 114759
Number of HSP's gapped (non-prelim): 1390
length of query: 154
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 132
effective length of database: 17,147,199,772
effective search space: 2263430369904
effective search space used: 2263430369904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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